Şalgam is a traditional drink produced via the lactic-acid fermentation of vegetables (black carrot and turnip), sourdough, and bulgur flour; with rock salt also added. During storage, an additional yeast-mediated fermentation can occur, causing changes in organoleptic properties, as evidenced by the microbe-mediated release of gases. Here, we characterise şalgam as a microbial habitat, identify the yeasts that cause spoilage, and characterise yeast-induced changes of the şalgam. The total acidity of the spoiled şalgam, in terms of lactic acid, ranged from 5.33 to 8.36 g/L with pH values from 3.86 to 4.10. Nine different spoilage fungi were isolated and then identified using molecular techniques (combination of PCR-RFLP of the 5.8 S-rRNA region and sequencing of the D1/D2 domain of the 26 S-rRNA gene). The highest frequencies of species were for the (apparently dominant) Saccharomyces cerevisiae, Galactomyces candidum, and Pichia kudriavzevii. Notably, two of these yeasts—P. kudriavzevii and Saccharomyces cerevisiae—are known to be acid-tolerant, have a robust stress biology, and can dominate various microbial habitats including those of fermented foods and drinks. Şalgam is a nutrient-rich, high-water-activity habitat that can favour the growth of various microbes and becomes less acidic (so more ecologically open) after the proliferation of yeasts.
{"title":"Black-carrot drink şalgam as a habitat for spoilage yeasts","authors":"Dilek Safkan, Bilal Agirman, Bekir Safkan, Yeşim Soyer, Huseyin Erten","doi":"10.1016/j.funbio.2024.01.002","DOIUrl":"https://doi.org/10.1016/j.funbio.2024.01.002","url":null,"abstract":"<p><em>Şalgam</em> is a traditional drink produced via the lactic-acid fermentation of vegetables (black carrot and turnip), sourdough, and bulgur flour; with rock salt also added. During storage, an additional yeast-mediated fermentation can occur, causing changes in organoleptic properties, as evidenced by the microbe-mediated release of gases. Here, we characterise <em>şalgam</em> as a microbial habitat, identify the yeasts that cause spoilage, and characterise yeast-induced changes of the <em>şalgam</em>. The total acidity of the spoiled <em>şalgam</em>, in terms of lactic acid, ranged from 5.33 to 8.36 g/L with pH values from 3.86 to 4.10. Nine different spoilage fungi were isolated and then identified using molecular techniques (combination of PCR-RFLP of the 5.8 S-rRNA region and sequencing of the D1/D2 domain of the 26 S-rRNA gene). The highest frequencies of species were for the (apparently dominant) <em>Saccharomyces cerevisiae</em>, <em>Galactomyces candidum</em>, and <em>Pichia kudriavzevii</em>. Notably, two of these yeasts—<em>P. kudriavzevii</em> and <em>Saccharomyces cerevisiae</em>—are known to be acid-tolerant, have a robust stress biology, and can dominate various microbial habitats including those of fermented foods and drinks. <em>Şalgam</em> is a nutrient-rich, high-water-activity habitat that can favour the growth of various microbes and becomes less acidic (so more ecologically open) after the proliferation of yeasts.</p>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139656837","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-02-01DOI: 10.1016/j.funbio.2024.02.004
Ralph Noble, A. Dobrovin-Pennington
{"title":"Physicochemical characterisation of casings in relation to mushroom (Agaricus bisporus) cropping performance","authors":"Ralph Noble, A. Dobrovin-Pennington","doi":"10.1016/j.funbio.2024.02.004","DOIUrl":"https://doi.org/10.1016/j.funbio.2024.02.004","url":null,"abstract":"","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139816136","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-30DOI: 10.1016/j.funbio.2024.01.007
Abraham Demelash Chane , Zdeněk Košnář , Tereza Hřebečková , Miroslav Jozífek , Petr Doležal , Pavel Tlustoš
Polycyclic aromatic hydrocarbons (PAHs) are widely present in the environment, causing increasing concern because of their impact on soil health, food safety and potential health risks. Four bioremediation strategies were examined to assess the dissipation of PAHs in agricultural soil amended with sewage sludge over a period of 120 days: soil-sludge natural attenuation (SS); phytoremediation using maize (Zea mays L.) (PSS); mycoremediation (MR) separately using three white-rot fungi (Pleurotus ostreatus, Phanerochaete chrysosporium and Irpex lacteus); and plant-assisted mycoremediation (PMR) using a combination of maize and fungi. In the time frame of the experiment, mycoremediation using P. chrysosporium (MR-PH) exhibited a significantly higher (P < 0.05) degradation of total PAHs compared to the SS and PSS treatments, achieving a degradation rate of 52 %. Both the SS and PSS treatments demonstrated a lower degradation rate of total PAHs, with removal rates of 18 % and 32 %, respectively. The PMR treatments showed the highest removal rates of total PAHs at the end of the study, with degradation rates of 48–60 %. In the shoots of maize, only low- and medium-molecular-weight PAHs were found in both the PSS and PMR treatments. The calculated translocation and bioconversion factors always showed values < 1. The analysed enzymatic activities were higher in the PMR treatments compared to other treatments, which can be positively related to the higher degradation of PAHs in the soil.
{"title":"Persistent polycyclic aromatic hydrocarbons removal from sewage sludge-amended soil through phytoremediation combined with solid-state ligninolytic fungal cultures","authors":"Abraham Demelash Chane , Zdeněk Košnář , Tereza Hřebečková , Miroslav Jozífek , Petr Doležal , Pavel Tlustoš","doi":"10.1016/j.funbio.2024.01.007","DOIUrl":"10.1016/j.funbio.2024.01.007","url":null,"abstract":"<div><p><span><span>Polycyclic aromatic hydrocarbons (PAHs) are widely present in the environment, causing increasing concern because of their impact on soil health, food safety and potential health risks. Four bioremediation strategies were examined to assess the dissipation of PAHs in agricultural soil amended with sewage sludge over a period of 120 days: soil-sludge natural attenuation (SS); </span>phytoremediation using maize (</span><span><em>Zea</em><em> mays</em></span> L.) (PSS); mycoremediation (MR) separately using three white-rot fungi (<span><em>Pleurotus ostreatus</em></span>, <span><em>Phanerochaete </em><em>chrysosporium</em></span> and <em>Irpex lacteus)</em>; and plant-assisted mycoremediation (PMR) using a combination of maize and fungi. In the time frame of the experiment, mycoremediation using <em>P</em>. <em>chrysosporium</em> (MR-PH) exhibited a significantly higher (<em>P</em><span><span> < 0.05) degradation of total PAHs compared to the SS and PSS treatments, achieving a degradation rate of 52 %. Both the SS and PSS treatments demonstrated a lower degradation rate of total PAHs, with removal rates of 18 % and 32 %, respectively. The PMR treatments showed the highest removal rates of total PAHs at the end of the study, with degradation rates of 48–60 %. In the shoots of maize, only low- and medium-molecular-weight PAHs were found in both the PSS and PMR treatments. The calculated translocation and bioconversion factors always showed values < 1. The analysed </span>enzymatic activities were higher in the PMR treatments compared to other treatments, which can be positively related to the higher degradation of PAHs in the soil.</span></p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139656958","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-24DOI: 10.1016/j.funbio.2024.01.006
Jennifer Lorena García Riaño , Gloria Patricia Barrera , Leonardo Castellanos Hernández , Laura Fernanda Villamizar
Microsclerotia (MS) are considered one of the most promising propagules for use as active ingredients in biopesticides due to their tolerance to abiotic factors and ability to produce infective conidia for the control of pests. Therefore, the objective of this research was to establish the conditions required to induce the formation of microsclerotia in Metarhizium robertsii Mt004 and to study its development process, tolerance to abiotic factors and insecticidal activity of MS-derived conidia. M. robertsii started to form hyphal aggregates after 2 days and looked more compact after 8 days. MS were mature and pigmented after 20 days. The final yield was 2.0 × 103 MS/mL and MS size varied between 356.9 and 1348.4 μm. Ultrastructure analysis revealed that mature MS contained only a few live cells embedded in an extracellular matrix. Mature MS were more tolerance to UV-B radiation, heat and storage trials than conidia from Solid State Fermentation. MS-derived conidia were as virulent as conidia against Diatraea saccharalis larvae. These results showed that MS are promising propagules for the development of more persistent and efficient biopesticides for harsh environmental conditions. Our findings provide a baseline for production and a better understanding of microsclerotia development in M. robertsii strains.
小硬孢菌(MS)因其对非生物因素的耐受性和产生感染性分生孢子以控制害虫和植物病原体的能力,被认为是最有希望用作生物农药活性成分的繁殖体之一。因此,本研究的主要目的是确定诱导 Metarhizium robertsii Mt004 形成小硬孢菌所需的条件,并研究其发育过程、对非生物因素的耐受性以及 MS 衍生分生孢子的杀虫活性。M.robertsii在2天后开始形成菌丝聚集体,8天后结构更加紧凑,20天后MS成熟并着色。最终产量为 2.0 × 103 MS/mL,MS 大小在 356.9 和 1348.4 μm 之间。超微结构分析表明,在 MS 成熟过程中,内部细胞会溶解,成熟的 MS 只含有少量嵌入细胞外基质的活细胞。通过固态发酵(SSF)在水稻上产生的分生孢子在紫外线-B 光照射 1 小时后完全死亡,而 84.7% 的 MS 在 4 小时后仍然存活。与分生孢子相比,在 50 °C 下暴露 3 小时后,质粒对热的耐受力是分生孢子的 2.5 倍。储存试验表明,分生孢子的活力在 2 个月后迅速下降,而 MS 在 8 ℃ 和 18 ℃ 下储存 4 个月后仍有活力。MS 衍生的分生孢子与在稻谷上产生的分生孢子对糖核虫幼虫的毒力相同。成熟的 MS 比 SSF 的分生孢子更耐热和紫外线辐射。需要对发酵过程进行优化,以提高产量,同时缩短发酵时间并保持小菌丝的健壮性。总之,这些结果使我们得出结论:MS 是一种很有前途的繁殖体,可用于开发在恶劣环境条件下更持久、更高效的生物农药。我们的研究结果为生产提供了一个基准,并使人们更好地了解了罗伯茨小孢子菌株的小孢子发育情况。
{"title":"Microsclerotia from Metarhizium robertsii: Production, ultrastructural analysis, robustness, and insecticidal activity","authors":"Jennifer Lorena García Riaño , Gloria Patricia Barrera , Leonardo Castellanos Hernández , Laura Fernanda Villamizar","doi":"10.1016/j.funbio.2024.01.006","DOIUrl":"10.1016/j.funbio.2024.01.006","url":null,"abstract":"<div><p>Microsclerotia (MS) are considered one of the most promising propagules for use as active ingredients in biopesticides due to their tolerance to abiotic factors and ability to produce infective conidia for the control of pests. Therefore, the objective of this research was to establish the conditions required to induce the formation of microsclerotia in <em>Metarhizium robertsii</em> Mt004 and to study its development process, tolerance to abiotic factors and insecticidal activity of MS-derived conidia. <em>M. robertsii</em> started to form hyphal aggregates after 2 days and looked more compact after 8 days. MS were mature and pigmented after 20 days. The final yield was 2.0 × 10<sup>3</sup> MS/mL and MS size varied between 356.9 and 1348.4 μm. Ultrastructure analysis revealed that mature MS contained only a few live cells embedded in an extracellular matrix. Mature MS were more tolerance to UV-B radiation, heat and storage trials than conidia from Solid State Fermentation. MS-derived conidia were as virulent as conidia against <em>Diatraea saccharalis</em> larvae. These results showed that MS are promising propagules for the development of more persistent and efficient biopesticides for harsh environmental conditions. Our findings provide a baseline for production and a better understanding of microsclerotia development in <em>M. robertsii</em> strains.</p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1878614624000060/pdfft?md5=3c704ee18af2216e1cc404b4731af25a&pid=1-s2.0-S1878614624000060-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139557853","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-20DOI: 10.1016/j.funbio.2024.01.003
Ágnes Jakab , Kinga Csillag , Károly Antal , Imre Boczonádi , Renátó Kovács , István Pócsi , Tamás Emri
Although tyrosol is a quorum-sensing molecule of Candida species, it has antifungal activity at supraphysiological concentrations. Here, we studied the effect of tyrosol on the physiology and genome-wide transcription of Aspergillus nidulans to gain insight into the background of the antifungal activity of this compound. Tyrosol efficiently reduced germination of conidia and the growth on various carbon sources at a concentration of 35 mM. The growth inhibition was fungistatic rather than fungicide on glucose and was accompanied with downregulation of 2199 genes related to e.g. mitotic cell cycle, glycolysis, nitrate and sulphate assimilation, chitin biosynthesis, and upregulation of 2250 genes involved in e.g. lipid catabolism, amino acid degradation and lactose utilization. Tyrosol treatment also upregulated genes encoding glutathione-S-transferases (GSTs), increased specific GST activities and the glutathione (GSH) content of the cells, suggesting that A. nidulans can detoxify tyrosol in a GSH-dependent manner even though this process was weak. Tyrosol did not induce oxidative stress in this species, but upregulated “response to nutrient levels”, “regulation of nitrogen utilization”, “carbon catabolite activation of transcription” and “autophagy” genes. Tyrosol may have disturbed the regulation and orchestration of cellular metabolism, leading to impaired use of nutrients, which resulted in growth reduction.
{"title":"Total transcriptome response for tyrosol exposure in Aspergillus nidulans","authors":"Ágnes Jakab , Kinga Csillag , Károly Antal , Imre Boczonádi , Renátó Kovács , István Pócsi , Tamás Emri","doi":"10.1016/j.funbio.2024.01.003","DOIUrl":"10.1016/j.funbio.2024.01.003","url":null,"abstract":"<div><p>Although tyrosol is a quorum-sensing molecule of <em>Candida</em> species, it has antifungal activity at supraphysiological concentrations. Here, we studied the effect of tyrosol on the physiology and genome-wide transcription of <em>Aspergillus nidulans</em> to gain insight into the background of the antifungal activity of this compound. Tyrosol efficiently reduced germination of conidia and the growth on various carbon sources at a concentration of 35 mM. The growth inhibition was fungistatic rather than fungicide on glucose and was accompanied with downregulation of 2199 genes related to e.g. mitotic cell cycle, glycolysis, nitrate and sulphate assimilation, chitin biosynthesis, and upregulation of 2250 genes involved in e.g. lipid catabolism, amino acid degradation and lactose utilization. Tyrosol treatment also upregulated genes encoding glutathione-S-transferases (GSTs), increased specific GST activities and the glutathione (GSH) content of the cells, suggesting that <em>A. nidulans</em> can detoxify tyrosol in a GSH-dependent manner even though this process was weak. Tyrosol did not induce oxidative stress in this species, but upregulated “response to nutrient levels”, “regulation of nitrogen utilization”, “carbon catabolite activation of transcription” and “autophagy” genes. Tyrosol may have disturbed the regulation and orchestration of cellular metabolism, leading to impaired use of nutrients, which resulted in growth reduction.</p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1878614624000035/pdfft?md5=4891c3266afb47f7fa6a205f7b9c64f1&pid=1-s2.0-S1878614624000035-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139558015","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-20DOI: 10.1016/j.funbio.2024.01.004
Yuanzhen Deng , Xiuyuan Luo , Huanyuan Wang , Shubo Li , Jingjuan Liang , Zongwen Pang
Xylitol is an increasingly popular functional food additive, and the newly isolated yeast Wickerhamomyces anomalus WA has shown extensive substrate utilization capability, with the ability to grow on hexose (d-galactose, d-glucose, d-mannose, l-fructose, and d-sorbose) and pentose (d-xylose and l-arabinose) substrates, as well as high tolerance to xylose at concentrations of up to 300 g/L. Optimal xylitol fermentation conditions were achieved at 32 °C, 140 rpm, pH 5.0, and initial cell concentration OD600 of 2.0, with YP (yeast extract 10 g/L, peptone 20 g/L) as the optimal nitrogen source. Xylitol yield increased from 0.61 g/g to 0.91 g/g with an increase in initial substrate concentration from 20 g/L to 180 g/L. Additionally, 20 g/L glycerol was found to be the optimal co-substrate for xylitol fermentation, resulting in an increase in xylitol yield from 0.82 g/g to 0.94 g/g at 140 rpm, enabling complete conversion of xylose to xylitol.
{"title":"Xylitol fermentation characteristics with a newly isolated yeast Wickerhamomyces anomalus WA","authors":"Yuanzhen Deng , Xiuyuan Luo , Huanyuan Wang , Shubo Li , Jingjuan Liang , Zongwen Pang","doi":"10.1016/j.funbio.2024.01.004","DOIUrl":"10.1016/j.funbio.2024.01.004","url":null,"abstract":"<div><p><span>Xylitol is an increasingly popular functional food additive, and the newly isolated yeast </span><span><em>Wickerhamomyces anomalus</em></span><span> WA has shown extensive substrate utilization capability, with the ability to grow on hexose (</span><span>d</span>-galactose, <span>d</span>-glucose, <span>d</span>-mannose, <span>l</span>-fructose, and <span>d</span><span>-sorbose) and pentose (</span><span>d</span>-xylose and <span>l</span><span>-arabinose) substrates, as well as high tolerance to xylose at concentrations of up to 300 g/L. Optimal xylitol fermentation conditions were achieved at 32 °C, 140 rpm, pH 5.0, and initial cell concentration OD</span><sub>600</sub><span> of 2.0, with YP (yeast extract 10 g/L, peptone<span> 20 g/L) as the optimal nitrogen source. Xylitol yield increased from 0.61 g/g to 0.91 g/g with an increase in initial substrate concentration from 20 g/L to 180 g/L. Additionally, 20 g/L glycerol was found to be the optimal co-substrate for xylitol fermentation, resulting in an increase in xylitol yield from 0.82 g/g to 0.94 g/g at 140 rpm, enabling complete conversion of xylose to xylitol.</span></span></p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139517218","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-14DOI: 10.1016/j.funbio.2024.01.005
Nicholas P. Money
Thermotolerance has been viewed as an uncommon characteristic among the fungi and one of the reasons that less than 1% of the described species operate as opportunistic pathogens of humans. Growth at 37°C is certainly a requirement for a fungus that invades the body core, but tens of thousands of nonpathogenic species are also able to grow at this temperature. Ergo, body temperature does not serve as a thermal barrier to the development of infections by many harmless fungi. The absence of other virulence factors must be more demanding. This observation raises questions about the hypothetical links between climate change and the increasing number of life-threatening human mycoses. Given the widespread distribution of fungal thermotolerance and the 1°C (2°F) increase in global temperature over the last 140 years it seems unlikely that the warming climate has driven the evolution of more virulent strains of fungi. More compelling explanations for the changes in the behavior of fungi as disease agents include their adaptation to the widening use of azole antifungals in hospitals and the wholesale application of millions of tons of the same class of heterocyclic chemicals in agriculture. On the other hand, climate change is having a significant effect on the spread of human mycoses by extending the geographical range of pathogenic fungi. A related increase in fungal asthma caused by spore inhalation is another likely consequence of planetary change.
耐热性一直被认为是真菌中不常见的特性,也是只有不到 1%的真菌被描述为人类机会性病原体的原因之一。在 37 °C 下生长当然是侵入人体核心的真菌的必要条件,但数以万计的非致病菌也能在这一温度下生长。因此,体温并不是许多无害真菌发生感染的热屏障。如果没有其他致病因子,则要求更高。这一观察结果提出了气候变化与威胁生命的人类真菌病日益增多之间的假定联系问题。鉴于真菌耐热性的广泛分布以及过去 140 年中全球气温上升了 1 °C(2 °F),气候变暖似乎不太可能促使真菌进化出毒性更强的菌株。更有说服力的解释是,真菌作为病原体的行为发生了变化,包括它们适应了医院对唑类抗真菌药的广泛使用,以及在农业中大量使用数百万吨同一类杂环化学物质。另一方面,气候变化扩大了致病真菌的地理范围,对人类真菌病的传播产生了重大影响。因吸入孢子而引起的真菌性哮喘病的相关增加是地球变化的另一个可能后果。
{"title":"Fungal thermotolerance revisited and why climate change is unlikely to be supercharging pathogenic fungi (yet)","authors":"Nicholas P. Money","doi":"10.1016/j.funbio.2024.01.005","DOIUrl":"10.1016/j.funbio.2024.01.005","url":null,"abstract":"<div><p>Thermotolerance has been viewed as an uncommon characteristic among the fungi and one of the reasons that less than 1% of the described species operate as opportunistic pathogens of humans. Growth at 37°C is certainly a requirement for a fungus that invades the body core, but tens of thousands of nonpathogenic species are also able to grow at this temperature. Ergo, body temperature does not serve as a thermal barrier to the development of infections by many harmless fungi. The absence of other virulence factors must be more demanding. This observation raises questions about the hypothetical links between climate change and the increasing number of life-threatening human mycoses. Given the widespread distribution of fungal thermotolerance and the 1°C (2°F) increase in global temperature over the last 140 years it seems unlikely that the warming climate has driven the evolution of more virulent strains of fungi. More compelling explanations for the changes in the behavior of fungi as disease agents include their adaptation to the widening use of azole antifungals in hospitals and the wholesale application of millions of tons of the same class of heterocyclic chemicals in agriculture. On the other hand, climate change is having a significant effect on the spread of human mycoses by extending the geographical range of pathogenic fungi. A related increase in fungal asthma caused by spore inhalation is another likely consequence of planetary change.</p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1878614624000059/pdfft?md5=48a66b32d8d4c5593c554b62925c980e&pid=1-s2.0-S1878614624000059-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139465046","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-06DOI: 10.1016/j.funbio.2024.01.001
Raymond J. St Leger
Metarhizium species interact with plants, insects, and microbes within a diffuse co-evolutionary framework that benefits soil health, biodiversity, and plant growth. The insect host ranges of these fungi vary greatly. Specialization to a narrow host range usually occurs in the tropics with its stable insect populations, and is characterized by the rapid evolution of existing protein sequences, sexual recombination, and small genomes. Host-generalists are associated with temperate regions and ephemeral insect populations. Their mutualistic plant-colonizing lifestyle increases survival when insects are rare, while facultative entomopathogenicity feeds both the fungi and plants when insects are common. Host-generalists have lost meiosis and associated genome defense mechanisms, enabling gene duplications to diversify functions related to plant colonization and host exploitation. Horizontal gene transfer events via transposons have also contributed to host range changes, while parasexuality combines beneficial mutations within individual clones of host-generalists. There is also a lot of genetic variation in insect populations and an increasing understanding that both pathogen virulence and insect immunity are linked with stress responses. Thus, susceptibility to host-generalists can vary due to non-specific resistance to multiple stressors, multipurpose physical and chemical barriers, and heterogeneity in physiological and behavioral factors, such as sleep.
{"title":"The evolution of complex metarhizium-insect-plant interactions","authors":"Raymond J. St Leger","doi":"10.1016/j.funbio.2024.01.001","DOIUrl":"https://doi.org/10.1016/j.funbio.2024.01.001","url":null,"abstract":"<p><em>Metarhizium</em> species interact with plants, insects, and microbes within a diffuse co-evolutionary framework that benefits soil health, biodiversity, and plant growth. The insect host ranges of these fungi vary greatly. Specialization to a narrow host range usually occurs in the tropics with its stable insect populations, and is characterized by the rapid evolution of existing protein sequences, sexual recombination, and small genomes. Host-generalists are associated with temperate regions and ephemeral insect populations. Their mutualistic plant-colonizing lifestyle increases survival when insects are rare, while facultative entomopathogenicity feeds both the fungi and plants when insects are common. Host-generalists have lost meiosis and associated genome defense mechanisms, enabling gene duplications to diversify functions related to plant colonization and host exploitation. Horizontal gene transfer events via transposons have also contributed to host range changes, while parasexuality combines beneficial mutations within individual clones of host-generalists. There is also a lot of genetic variation in insect populations and an increasing understanding that both pathogen virulence and insect immunity are linked with stress responses. Thus, susceptibility to host-generalists can vary due to non-specific resistance to multiple stressors, multipurpose physical and chemical barriers, and heterogeneity in physiological and behavioral factors, such as sleep.</p>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139372961","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.funbio.2023.12.008
Raphael Bchini, Sylvain Darnet, Arthur de Butler, Annick Doan, Lydie Oliveira-Correia, David Navarro, Eric Record, Mélanie Morel-Rouhier
Plant metabolites have a great potential for limiting the spread of harmful fungi. However, a better understanding of the mode-of-action of these molecules and the defense systems developed by fungi to resist them, is needed to assess the benefits/risks of using them as antifungal treatment. White-rot fungi are excellent models in this respect, as they have adapted to the hostile habitat that is wood. In fact, wood is a source of putative antifungal compounds that can be derived using extraction techniques. In this study, we demonstrated that esculin and esculetin, which are coumarins found in plants and wood, reduce the growth of the wood-rotting fungi Fomitiporia mediterranea, Phanerochaete chrysosporium, Pycnoporus cinnabarinus and Trametes versicolor. We have shown that extracellular strategies are developed by the fungi to deal with esculin, through the involvement of laccases, peroxidases and glycoside hydrolases, and intracellular strategies, mainly via upregulated protein translation. Comparative proteomic and metabolomic approaches revealed that, despite the fact that the species analysed are closely related (they all belong to the Agaricomycetes, and have the same trophic mode), their defense responses to esculin differ.
{"title":"Responses to and detoxification of esculin in white-rot fungi","authors":"Raphael Bchini, Sylvain Darnet, Arthur de Butler, Annick Doan, Lydie Oliveira-Correia, David Navarro, Eric Record, Mélanie Morel-Rouhier","doi":"10.1016/j.funbio.2023.12.008","DOIUrl":"https://doi.org/10.1016/j.funbio.2023.12.008","url":null,"abstract":"<p>Plant metabolites have a great potential for limiting the spread of harmful fungi. However, a better understanding of the mode-of-action of these molecules and the defense systems developed by fungi to resist them, is needed to assess the benefits/risks of using them as antifungal treatment. White-rot fungi are excellent models in this respect, as they have adapted to the hostile habitat that is wood. In fact, wood is a source of putative antifungal compounds that can be derived using extraction techniques. In this study, we demonstrated that esculin and esculetin, which are coumarins found in plants and wood, reduce the growth of the wood-rotting fungi <em>Fomitiporia mediterranea, Phanerochaete chrysosporium</em>, <em>Pycnoporus cinnabarinus</em> and <em>Trametes versicolor</em>. We have shown that extracellular strategies are developed by the fungi to deal with esculin, through the involvement of laccases, peroxidases and glycoside hydrolases, and intracellular strategies, mainly via upregulated protein translation. Comparative proteomic and metabolomic approaches revealed that, despite the fact that the species analysed are closely related (they all belong to the Agaricomycetes, and have the same trophic mode), their defense responses to esculin differ.</p>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139094607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-12-31DOI: 10.1016/j.funbio.2023.12.007
Jiangtao Xie , Sibei Lu , Entaj Tarafder , Yintao Pan , Keqin Peng , Xiangyu Zeng , Fenghua Tian
Auricularia cornea is an important edible mushroom crop in China but the occurrence of cobweb disease has cause significance economic loss in its production. The rate of disease occurrence is 16.65% all over the country. In the present study, a new pathogen Hypomyces cornea sp. nov. was found to cause the cobweb disease. In July 2021, three strains of fungal pathogen were isolated from infected fruiting bodies and identified as H. cornea based on morphological studies and molecular phylogenetic analysis of internal transcribed spacer (ITS) of nuclear ribosomal DNA, mitochondrial large subunit (LSU) of rRNA and the partial translation elongation factor 1-alpha genes. The representative isolates of the pathogenic Hypomyces species used to perform pathogenicity test with spore suspension that caused similar symptoms as those observed in the cultivated field, and same pathogens could be re-isolated, which fulfill Koch's postulates. The typical biological characterization was examined of the serious pathogen to determine its favorable growth conditions, including suitable temperature, pH, carbon, nitrogen sources and light conditions. The findings revealed an optimum temperature of 25 °C, pH of 6, and soluble starch and peptone as the preferred carbon and nitrogen sources, respectively. The hyphal growth inhibition method was used for primary in vitro screening test of seven common fungicides, and the most suitable fungicide is Prochloraz manganese chloride complex, the EC50 values of cobweb pathogen and mushrooms were 0.085 μg/mL and 2.452 μg/mL, respectively. The results of our research provide an evidence-based basis for the effective prevention and treatment of A. cornea cobweb disease.
{"title":"Taxonomy, biological characterization and fungicide sensitivity assays of Hypomyces cornea sp. nov. causing cobweb disease on Auricularia cornea","authors":"Jiangtao Xie , Sibei Lu , Entaj Tarafder , Yintao Pan , Keqin Peng , Xiangyu Zeng , Fenghua Tian","doi":"10.1016/j.funbio.2023.12.007","DOIUrl":"10.1016/j.funbio.2023.12.007","url":null,"abstract":"<div><p><em>Auricularia cornea</em> is an important edible mushroom crop in China but the occurrence of cobweb disease has cause significance economic loss in its production. The rate of disease occurrence is 16.65% all over the country. In the present study, a new pathogen <em>Hypomyces cornea</em> sp. nov. was found to cause the cobweb disease. In July 2021, three strains of fungal pathogen were isolated from infected fruiting bodies and identified as <em>H. cornea</em> based on morphological studies and molecular phylogenetic analysis of internal transcribed spacer (ITS) of nuclear ribosomal DNA, mitochondrial large subunit (LSU) of rRNA and the partial translation elongation factor 1-alpha genes. The representative isolates of the pathogenic <em>Hypomyces</em> species used to perform pathogenicity test with spore suspension that caused similar symptoms as those observed in the cultivated field, and same pathogens could be re-isolated, which fulfill Koch's postulates. The typical biological characterization was examined of the serious pathogen to determine its favorable growth conditions, including suitable temperature, pH, carbon, nitrogen sources and light conditions. The findings revealed an optimum temperature of 25 °C, pH of 6, and soluble starch and peptone as the preferred carbon and nitrogen sources, respectively. The hyphal growth inhibition method was used for primary in vitro screening test of seven common fungicides, and the most suitable fungicide is Prochloraz manganese chloride complex, the EC<sub>50</sub> values of cobweb pathogen and mushrooms were 0.085 μg/mL and 2.452 μg/mL, respectively. The results of our research provide an evidence-based basis for the effective prevention and treatment of <em>A. cornea</em> cobweb disease.</p></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":null,"pages":null},"PeriodicalIF":2.5,"publicationDate":"2023-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1878614623001381/pdfft?md5=75620b33e8f0f9cf9522cf25b131d3dd&pid=1-s2.0-S1878614623001381-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139070454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}