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Mechanistic insights into rhizosphere microbiome assembly in Pinus tabuliformis: The role of cross–kingdom interactions and soil salinity gradients 油松根际微生物群组合的机制:跨界相互作用和土壤盐度梯度的作用
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-26 DOI: 10.1016/j.funbio.2025.101695
Yilin Luo , Haiyun Ding , Xiyan Mao , Zhixin Kang , Boda Li , Yong Zhou
Soil salinization caused by desertification and drought severely limits agricultural and forestry development. The rhizosphere core microbiome plays a vital role in helping host plants cope with environmental stress. However, in saline-alkali soils, it remains unclear how bacterial and fungal communities in the rhizosphere of Pinus tabuliformis interact and collectively respond to environmental factors to influence the plant. This study aims to identify the composition and functional potential of the core bacterial and fungal microbiota in the rhizosphere of P. tabuliformis in saline environments, as well as their interactions with environmental factors, thus providing a theoretical basis for utilizing core rhizosphere microbial resources. We performed high-throughput sequencing of root samples from P. tabuliformis at four locations. We analyzed the community structure and functional profiles of bacteria and fungi and their relationships with soil physicochemical properties. The environmental factors most influencing the number of core bacterial species were organic matter (OM), Na+, and total potassium (TK). Meanwhile, total phosphorus (TP) was the most influential soil factor for core fungal species. Correlation analysis showed that TN, TP, and pH significantly affected both bacterial and fungal community variation (P < 0.05). Co-occurrence network analysis indicated complex cross–kingdom interactions between core bacterial and fungal taxa. Functional predictions suggested that bacterial communities exhibit both potential pathogenicity and stress resistance, while fungal communities are more saprotrophic and sensitive to environmental changes. Microbial communities at the SYH site displayed a "high pathogenicity–low resistance" profile, contrasting with those at the MC site. Correlation network analysis further uncovered complex mutualistic and competitive relationships among core bacterial and fungal genera. This study demonstrates that P. tabuliformis rhizosphere bacterial and fungal communities respond collaboratively to salinity stress through functional complementarity, such as bacterial enrichment in stress resistance and fungal dominance in saprotrophy. These findings may offer new insights into enhancing the adaptability of P. tabuliformis and improving sandy land ecosystems by targeted management of the soil microbiome.
沙漠化和干旱造成的土壤盐碱化严重制约了农林的发展。根际核心微生物群在帮助寄主植物应对环境胁迫方面起着至关重要的作用。然而,在盐碱土壤中,尚不清楚油松根际细菌和真菌群落如何相互作用并集体响应环境因素来影响植物。本研究旨在确定盐渍环境下油油树根际核心菌群和真菌菌群的组成和功能潜力,以及它们与环境因子的相互作用,从而为油油树根际核心微生物资源的利用提供理论依据。我们在四个地点对油棕根样品进行了高通量测序。分析了细菌和真菌的群落结构、功能特征及其与土壤理化性质的关系。对核心细菌种类数量影响最大的环境因子是有机质(OM)、Na+和总钾(TK)。同时,对核心真菌种类影响最大的土壤因子是全磷(TP)。相关分析显示,TN、TP和pH对细菌和真菌群落变异均有显著影响(P < 0.05)。共现网络分析表明,核心细菌和真菌类群之间存在复杂的跨界相互作用。功能预测表明,细菌群落表现出潜在的致病性和抗逆性,而真菌群落更腐坏,对环境变化敏感。与MC位点相比,SYH位点的微生物群落表现出“高致病性-低耐药性”的特征。相关网络分析进一步揭示了核心细菌和真菌属之间复杂的互惠和竞争关系。本研究表明油油树根际细菌和真菌群落通过功能互补,如细菌在抗逆性方面的富集和真菌在腐殖性方面的优势,协同响应盐度胁迫。这些发现可能为通过有针对性的土壤微生物群管理来提高油油杉的适应性和改善沙地生态系统提供新的见解。
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引用次数: 0
The secreted in xylem protein Foc4-SIX13 of Fusarium oxysporum f. sp. cubense race 4 targets the banana Nudix hydrolase and contributes to its virulence 尖孢镰刀菌(Fusarium oxysporum f. spp . cubense)小种4木质部分泌的蛋白Foc4-SIX13以香蕉Nudix水解酶为靶点,参与了其致毒作用
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-22 DOI: 10.1016/j.funbio.2025.101694
Wenjing Chen , Jiamin Zheng , Jiahui Wu , Rujing Zeng , Zheng Li , Yinghua Huang , Tom Hsiang , Handa Song , Mei Luo , Zhangyong Dong
Fusarium wilt, commonly referred to as Panama disease, stands as the most catastrophic disease in banana cultivation. Caused by Fusarium oxysporum f. sp. cubense (Foc), it has imposed substantial economic burdens on banana farmers worldwide. Foc4-SIX13 was identified as a potential effector in Foc4, and is characterized by secretion into xylem. It is a protein comprised of 312 amino acids, and features a functional signal peptide without recognizable motifs or domains. Quantitative reverse transcription polymerase chain reaction (RT-qPCR) analysis revealed that the expression of Foc4-SIX13 was markedly upregulated during the initial stage of fungal infection in banana plants. Through homologous recombination, the successful knockout of Foc4-SIX13 was accomplished. The resulting deletion mutant exhibited impaired mycelial growth and increased sensitivity to osmotic stress, coupled with a significant decrease in pathogenicity towards bananas. Foc4-SIX13Δsp could not induce cellular necrosis in Nicotiana benthamiana. Subcellular localization experiments demonstrated that Foc4-SIX13Δsp was localized in both cytoplasm and nuclei of N. benthamiana cells. The interaction between Foc4-SIX13 and banana Nudix hydrolase 23 (Ma-NUD23) was confirmed by yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays. Taken together, these findings highlight the pivotal role of Foc4-SIX13 in the pathogenicity of Foc4 and its importance in the Fusarium infection process. Consequently, Foc4-SIX13 is proposed as a promising target for future management strategies against Fusarium wilt, and it can provide a novel avenue for the breeding of banana varieties with enhanced disease resistance.
枯萎病,通常被称为巴拿马病,是香蕉种植中最具灾难性的疾病。由古巴尖孢镰刀菌(Fusarium oxysporum f. sp. cubense, Foc)引起的该病给全世界的香蕉种植者造成了巨大的经济负担。Foc4- six13被认为是Foc4的潜在效应因子,其特征是分泌到木质部。它是一种由312个氨基酸组成的蛋白质,具有功能信号肽,没有可识别的基序或结构域。定量反转录聚合酶链反应(RT-qPCR)分析显示,在真菌侵染香蕉植株初期,Foc4-SIX13的表达显著上调。通过同源重组,成功敲除Foc4-SIX13。由此产生的缺失突变体表现出菌丝生长受损和对渗透胁迫的敏感性增加,同时对香蕉的致病性显著降低。Foc4-SIX13Δsp不能诱导烟叶细胞坏死。亚细胞定位实验表明,Foc4-SIX13Δsp在benthamiana细胞的细胞质和细胞核中都有定位。通过酵母双杂交(Y2H)和双分子荧光互补(BiFC)实验证实了Foc4-SIX13与香蕉Nudix水解酶23 (Ma-NUD23)的相互作用。综上所述,这些发现突出了Foc4- six13在Foc4致病性中的关键作用及其在镰刀菌感染过程中的重要性。因此,Foc4-SIX13可以作为未来香蕉枯萎病防治策略的重要靶点,为香蕉品种的抗病育种提供新的途径。
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引用次数: 0
Haplotype studies and population structure analysis of the South Indian population of Phytophthora species infecting black pepper 侵染黑胡椒的南印度疫霉种群的单倍型研究和种群结构分析
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-22 DOI: 10.1016/j.funbio.2025.101693
Fathimath Zumaila , Arjunan Jeevalatha , Chakkiyanickal Narayanan Biju
Black pepper production has been gravely struck by the wreaking havoc due to foot rot caused by Phytophthora species namely, Phytophthora capsici and Phytophthora tropicalis. In India, black pepper is widely cultivated in Karnataka, Kerala and Tamil Nadu. The present study included the isolates collected from these major black pepper growing regions for haplotype analysis to decipher population diversity and to characterize the colony and sporangial morphology. Morphological characters analyzed were highly variable, and the majority showed umbellate ontogeny with caducous sporangia exhibiting different shapes. The haplotype analysis was carried out using both mitochondrial (Cox-1, Cox-2, Nad1 and Nad5) and nuclear genes (β-tubulin, EF-1α, Enolase, HSP90, TigA and Ura3). Sequence analysis was performed after manually trimming and aligning the sequences using ClustalX2. DnaSP v6.12.03 was used to calculate various parameters like polymorphisms, haplotypes, haplotype and nuclear diversity, recombination events and neutrality tests. The isolates displayed a greater number of haplotypes for EF1-α, and the haplotypes identified for Nad1 and Ura3 were comparatively fewer. PopART was used for the visual representation of the identified haplotypes. Further, the haplotypes identified from P. capsici infecting diverse hosts from Hawaii and some of the contiguous United States were also compared with the present study to impart more clarity. Restoration of genetic diversity after a severe bottleneck through balancing selection was revealed using the demographic analysis. The phylogenetic study indicated a possibility that the South Indian black pepper Phytophthora population was closely related to the aforementioned US population. The population structure analysis showed two genetic clusters among the South Indian population, and isolates with admixture ancestry were also identified, indicating migration events.
辣椒疫霉(Phytophthora capsici)和热带疫霉(Phytophthora tropical alis)引起的足腐病对黑胡椒生产造成了严重的影响。在印度,黑胡椒在卡纳塔克邦、喀拉拉邦和泰米尔纳德邦被广泛种植。本研究对这些主要黑胡椒产区的分离菌株进行了单倍型分析,以揭示群体多样性并表征菌落和孢子囊形态。形态学特征变化很大,多数为伞形个体发育,早落孢子囊形状各异。采用线粒体基因(Cox-1、Cox-2、Nad1和Nad5)和细胞核基因(β-微管蛋白、EF-1α、烯醇酶、HSP90、TigA和Ura3)进行单倍型分析。使用ClustalX2手工修剪和对齐序列后进行序列分析。采用DnaSP v6.12.03计算多态性、单倍型、单倍型和核多样性、重组事件和中性检验等参数。分离株EF1-α的单倍型较多,Nad1和Ura3的单倍型较少。使用PopART对所鉴定的单倍型进行可视化表示。此外,从夏威夷和美国一些邻近地区感染不同宿主的辣椒辣椒单倍型中鉴定出的单倍型也与本研究进行了比较,以获得更清晰的结果。通过人口统计学分析揭示了遗传多样性通过平衡选择在严重瓶颈后的恢复。系统发育研究表明,南印度黑胡椒疫霉群体可能与上述美国群体亲缘关系密切。种群结构分析显示,在南印度种群中存在两个遗传集群,并且还鉴定出具有混合祖先的分离株,表明有迁移事件。
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引用次数: 0
Fungi associated with coffee rust Hemileia vastatrix and the description of two new species 与咖啡锈病有关的真菌及两新种的描述
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-17 DOI: 10.1016/j.funbio.2025.101692
Angélica María Berlanga-Padilla, Gisela Jareth Lino-López, Miguel Angel Ayala-Zermeño, Facundo Muñiz-Paredes, Roberto Montesinos-Matías, Jorge Antonio Sánchez-González
Coffee leaf rust, caused by Hemileia vastatrix, continues to pose a severe threat to coffee production in Mexico and globally. In response, the search for sustainable, ecologically based control strategies has turned toward mycopathogenic fungi as natural antagonists of plant pathogens. This study reports the isolation and characterization of 27 mycopathogenic fungal strains resembling Lecanicillium and Verticillium spp. from H. vastatrix pustules in the Mexican states of Chiapas, Colima, Nayarit and Veracruz. Detailed morphological and molecular analyses revealed two novel species (Akanthomyces hemiliae-vastatricis sp. nov. and Akanthomyces jabaliensis sp. nov.) as well as a new national record of Akanthomyces uredinophilus. The detection of Simplicillium lanosoniveum, a key natural antagonist of coffee rust, further underscores the ecological complexity of fungal interactions within coffee agroecosystems. These findings enrich the understanding of mycopathogen diversity associated with H. vastatrix and support the integration of native fungal strains into biological control frameworks, offering a promising path toward more resilient coffee cultivation systems.
由咖啡叶锈病引起的咖啡叶锈病继续对墨西哥和全球的咖啡生产构成严重威胁。因此,寻找可持续的、以生态为基础的控制策略已经转向将真菌作为植物病原体的天然拮抗剂。本文报道了墨西哥恰帕斯州、科利马州、纳亚里特州和韦拉克鲁斯州的27株类似Lecanicillium和Verticillium sp .的支原性真菌的分离和鉴定。详细的形态和分子分析发现了2个新种(半赤色Akanthomyces hemiliae-vastatricis sp. 11 .和jabanthomyces sp. 11 .)和嗜尿赤色Akanthomyces uredinophilus新记录。咖啡锈病的主要天然拮抗物——单纯霉的检测进一步强调了咖啡农业生态系统中真菌相互作用的生态复杂性。这些发现丰富了人们对与vastatrix相关的分枝原多样性的理解,并支持将本地真菌菌株整合到生物控制框架中,为更有弹性的咖啡种植系统提供了一条有希望的途径。
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引用次数: 0
A Scytalidium-like indoor fungus revealing polyphyletic relationships and convergent evolution in Scytalidium 一种镰刀属室内真菌,揭示了镰刀属植物的多系关系和趋同进化
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-15 DOI: 10.1016/j.funbio.2025.101691
De-Wei Li , Ethan Paine , Neil P. Schultes
A Scytalidium-like fungus was isolated from a dust sample collected indoors in the USA. Partial DNA sequences for the genomic regions of the 5.8S nuclear ribosomal DNA and flanking internal transcribed spacer (ITS), the nuclear ribosomal large subunit (LSU), the translation elongation factor 1-α (tef1), the β-tubulin (tub2) and the DNA-directed RNA polymerase II second largest subunit (rpb2) genes were determined. Phylogenetic analyses indicated that the indoor Scytalidium-like fungus is closely related to Scytalidium flavobrunneum, yet neither fungus is phylogenetically related to the generic type species, Scytalidium lignicola. Further analyses revealed that members of Scytalidium are polyphyletic belonging to eight orders: Amphisphaeriales, Coryneliales, Helotiales, Hypocreales, Mycosphaerellales, Pleosporales, Sordariales, Xylariales; seven subclasses: Coryneliomycetidae, Dothideomycetidae, Hypocreomycetidae, Leotiomycetidae, Pleosporomycetidae, Sordariomycetidae, Xylariomycetidae and four classes: Eurotiomycetes, Dothideomycetes, Leotiomycetes, and Sordariomycetes. Scytalidium s.s. belongs to Helotiales. The indoor fungus has dimorphic anamorphs and belongs to Monochaetia, Amphisphaeriales using sequences of five loci (ITS, LSU, tub2, tef1 and rpb2). Species of Scytalidium belonging to other orders are combined in their respective genera based on phylogenetic analyses using ITS and LSU. In our opinion, the polyphyletic nature of Scytalidium-like fungi shared morphological characteristics is the result of convergent evolution. At the same time, three new species, Scytalidium ruthenicum D.W. Li & N.P. Schultes, Monochaetia domiciliana D.W. Li & N.P. Schultes and Monochaetia arboricola D.W. Li & N.P. Schultes, were described and illustrated.
从美国室内收集的粉尘样品中分离出一种镰刀菌样真菌。测定了5.8S核糖体DNA和侧翼内转录间隔区(ITS)、核糖体大亚基(LSU)、翻译延伸因子1-α (tef1)、β-微管蛋白(tub2)和DNA导向RNA聚合酶II第二大亚基(rpb2)基因基因组区域的部分DNA序列。系统发育分析表明,该室内类Scytalidium flavobrunneum与syytalidium flavobrunneum亲缘关系密切,但与属型种Scytalidium lignicola均无亲缘关系。进一步分析表明,scytalidia的成员是多系的,分属于8个目:Amphisphaeriales, Coryneliales, Helotiales, Hypocreales, Mycosphaerellales, Pleosporales, Sordariales, Xylariales;7个亚类:棒状菌科、多孢子菌科、下隐菌科、多孢子菌科、索菌科、木菌科;4个亚类:Eurotiomycetes、Dothideomycetes、Leotiomycetes、Sordariomycetes。Scytalidium s.s.属于Helotiales。根据ITS、LSU、tub2、tef1和rpb2 5个位点的序列分析,该室内真菌具有二态变形,属于单毛亚目、双毛亚目。基于ITS和LSU的系统发育分析,将其他目的柳条属合并为各自的属。我们认为,镰刀菌类真菌具有相同形态特征的多系性是趋同进化的结果。同时对三种新种Scytalidium ruthenicum D.W. Li &; N.P. Schultes、Monochaetia domiciliana D.W. Li &; N.P. Schultes和Monochaetia arboricola D.W. Li &; N.P. Schultes进行了描述和图解。
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引用次数: 0
Effects of the wavelength and irradiance level of short-wave blue light on mycelial growth and deoxynivalenol production in Gibberella zeae 短波蓝光波长和辐照水平对玉米赤霉素菌丝生长和脱氧雪腐镰刀菌醇产量的影响
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-12 DOI: 10.1016/j.funbio.2025.101690
Akihiro Shirai , Kojiro Hosono , Ami Tanaka , Atsushi Tabata
The mycotoxin deoxynivalenol (DON) is a secondary metabolite produced by Fusarium graminearum (teleomorph synonym: Gibberella zeae), which causes Fusarium head blight disease in barley and wheat. Although many studies have explored the photobiological responses (from blue to red in the visible wavelength range) of fungi that produce mycotoxins, few have focused on the growth and DON production of F. graminearum exposed to short-wave blue light at approximately 400 nm. In this study, conidia of G. zeae JCM 9873 were exposed to light at wavelengths of 385 or 405 nm for 1, 1.5, and 2 h, with the irradiance adjusted to 19 (low) or 53 (high) mW/cm2. The effects of wavelength and irradiance on mycelial growth, colony morphology, DON yield, and the levels of four transcripts (Tri4, Tri5, Tri6, and Tri101) of genes involved in DON biosynthesis were investigated. In addition, accumulation of reactive oxygen species (ROS) was involved in DON biosynthesis. Conidia treated with 385 or 405 nm light at low and high irradiance for 2 h formed colonies after a 2-day cultivation (no colonies after 1 day), and the radial mycelial growth enlarged, eventually becoming comparable to unirradiated conidia. Colony observations confirmed the induction of an intense orange color after 405-nm irradiation with high irradiance only. The colonies derived from conidia exposed to 385-nm light at low irradiance for 2 h showed the lowest DON yield (0.104 ± 0.008 mg/g fungal biomass) among tested light conditions, corresponding to a yield of 43 % of the control samples. Quantitative real-time PCR analysis of transcript levels indicated that all four DON-associated genes were downregulated. The suppressive effect of 385-nm light treatment on DON production may be useful for constructing light treatments that are economical with weak irradiance. By contrast, all four Tri genes were upregulated after treatment with 405-nm light at high irradiance for 2 h, resulting in a high DON yield 1.49-times that of the control. Microscopic observations using a fluorescent ROS probe suggested that accumulation of intracellular ROS after irradiation with 405-nm light stimulates DON biosynthesis. Therefore, DON production in response to light exposure varies depending on the wavelength and irradiance within the short-wave blue light range. A better understanding of the photobiological responses to light in this range, as well as to light in the visible wavelength range, could facilitate the development of photo-technologies to control contamination by mycotoxins, including DON.
真菌毒素脱氧雪腐镰刀菌醇(DON)是由玉米赤霉病菌(镰刀菌)产生的次生代谢物,它引起大麦和小麦的枯萎病。尽管许多研究探索了产生真菌毒素的真菌的光生物学反应(从可见波长范围内的蓝色到红色),但很少有人关注F. graminearum暴露在大约400 nm的短波蓝光下的生长和DON的产生。本研究将玉米JCM 9873分生孢子分别暴露于385和405 nm波长的光下1、1.5和2 h,辐照度分别调节为19(低)和53(高)mW/cm2。研究了不同波长和辐照度对菌丝生长、菌落形态、DON产率和DON合成相关基因转录本(Tri4、Tri5、Tri6和Tri101)水平的影响。此外,活性氧(ROS)的积累参与了DON的生物合成。分生孢子在385 nm或405 nm低、高辐照光下培养2 h,培养2天后形成菌落(1天后无菌落),菌丝径向生长增大,最终与未辐照分生孢子相当。菌落观察证实,仅在405nm高辐照度照射后,诱导出强烈的橙色。在385 nm弱光照射2 h的分生孢子菌落中,DON的产率最低,为0.104±0.008 mg/g真菌生物量,相当于对照样品的43%。实时荧光定量PCR分析显示,4个don相关基因均下调。385-nm光处理对DON产生的抑制作用可能有助于构建经济的弱辐照光处理。405 nm高辐照处理2 h后,4个Tri基因均上调,DON产量为对照的1.49倍。荧光ROS探针显微镜观察表明,405 nm光照射后细胞内ROS的积累刺激了DON的生物合成。因此,DON的产生对光照射的响应取决于短波蓝光范围内的波长和辐照度。更好地了解对这一波长范围内的光以及可见光波长范围内的光的光生物学反应,可以促进光技术的发展,以控制霉菌毒素的污染,包括DON。
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引用次数: 0
Olive oil additive enhances hyphal growth and triterpenes accumulation in submerged fermentation of Grifola frondosa 橄榄油添加剂对灰树花深层发酵菌丝生长和三萜积累有促进作用
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-11 DOI: 10.1016/j.funbio.2025.101689
Qiaoyu Wang , Chenmeng Wan , Ke'er Xiao, Zijian Tong, Ziteng Zhao, Xinyu Meng, Mukaddas Sai, Yajie Bao, Lili Guan, Hongxia Ma, Linna Du
Grifola frondosa, a famous mushroom worldwide, is highly valued for its multiple health benefits. However, the limited mycelial biomass and low triterpenes (GFTs) yield remain critical constraints for large-scale utilization of this fungus. In the present study, the effect of different vegetable oils on the liquid fermentation efficiency of G. frondosa was investigated, firstly. Furthermore, following optimization of the olive oil addition process and analysis of fermentation kinetics, the positive effect of olive oil on the hyphal growth and GFTs accumulation was identified. Further observations revealed that olive oil treatment led to increased flocculent hyphae, peroxisomes, mitochondria, and reactive oxygen species levels. Additionally, improvements in membrane integrity, lipid droplet accumulation, energy metabolism, and antioxidant capacity were found in the olive-oil-treated hyphae. Transcriptome sequencing and qRT-PCR results indicated that the expression of various genes involved in the peroxisome pathway was upregulated in the olive-oil-treated hyphae, suggesting that peroxisomes may participate in G. frondosa's response to olive oil. Overall, supplementing olive oil enhanced the growth and triterpenes production of G. frondosa. This study provides a strategy for improving the efficiency of industrial liquid fermentation for this mushroom.
灰树花(Grifola frondosa)是一种世界著名的蘑菇,因其多种健康益处而受到高度重视。然而,有限的菌丝生物量和低的三萜(GFTs)产量仍然是制约该真菌大规模利用的关键因素。本研究首先考察了不同植物油对灰霉病菌液体发酵效率的影响。此外,通过优化橄榄油的添加工艺和发酵动力学分析,确定了橄榄油对菌丝生长和GFTs积累的积极影响。进一步的观察表明,橄榄油处理导致了絮状菌丝、过氧化物酶体、线粒体和活性氧水平的增加。此外,经橄榄油处理的菌丝在膜完整性、脂滴积累、能量代谢和抗氧化能力方面均有改善。转录组测序和qRT-PCR结果显示,在橄榄油处理的菌丝中,参与过氧化物酶体途径的多种基因表达上调,表明过氧化物酶体可能参与了灰霉病菌对橄榄油的反应。总的来说,添加橄榄油促进了灰树花的生长和三萜的产量。本研究为提高该菌的工业液体发酵效率提供了策略。
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引用次数: 0
Adaptive osmoregulation in successive flushes of Agaricus bisporus by free amino acids and mannitol 游离氨基酸和甘露醇对双孢蘑菇连续繁殖的适应性渗透调节
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-10 DOI: 10.1016/j.funbio.2025.101688
Guus van Iersel, Brigit van Brenk, Robert-Jan Bleichrodt
Agaricus bisporus, a widely cultivated edible button mushroom, is grown on composted substrates in successive flushes. While the first flush yields the largest and highest-quality mushrooms, later flushes exhibit reduced productivity and quality. These differences are due to physico-chemical changes of the substrate such as nutrient and water availability. Mushroom growth relies on maintaining an osmotic gradient between the substrate and fruiting body to allow resource translocation to the mushrooms. Classically mannitol is known as the most important osmolyte in A. bisporus mushrooms. In this study, we investigated osmotic regulation during mushroom development over two flushes. We found that under standard cultivation conditions, the profile of organic osmolytes varies significantly between flushes in response to a changing substrate composition. During the first flush, when carbon is still abundant, mannitol is the dominant organic osmolyte supporting fruiting body expansion. In contrast, the second flush occurs under carbon-limited conditions, prompting a shift in osmotic strategy: fruiting bodies accumulate more nitrogen, with free amino acids contributing substantially to osmotic potential, reaching up to 11 % of the dry weight. These findings reveal a dynamic osmotic adaptation mechanism in A. bisporus, where different osmolytes are utilized depending on substrate nutrient availability. This metabolic flexibility likely helps sustaining growth under suboptimal conditions and results in mushrooms with improved nutritional quality in later flushes. Understanding the interplay between substrate composition, osmolyte profiles, and fruiting body physiology offers new avenues for optimizing mushroom yield and quality in commercial systems.
双孢蘑菇(Agaricus bisporus)是一种广泛种植的可食用蘑菇,在堆肥基质上连续繁殖。虽然第一次冲洗产生最大和最高质量的蘑菇,但后期冲洗表现出生产力和质量下降。这些差异是由于基质的物理化学变化,如养分和水分的有效性。蘑菇的生长依赖于维持基质和子实体之间的渗透梯度,以允许资源向蘑菇转移。甘露醇被认为是双孢蘑菇中最重要的渗透物。在这项研究中,我们研究了渗透调节在蘑菇发育的两次冲洗。我们发现,在标准的培养条件下,有机渗透物的特征随着基质组成的变化而在不同的冲洗之间发生显著变化。在第一次冲洗期间,当碳仍然丰富时,甘露醇是支持子实体膨胀的主要有机渗透物。相反,第二次冲水发生在碳限制条件下,促使渗透策略发生转变:子实体积累更多的氮,游离氨基酸对渗透势的贡献很大,达到干重的11%。这些发现揭示了双孢酵母的动态渗透适应机制,其中不同的渗透酶被利用取决于基质的营养有效性。这种代谢灵活性可能有助于在次优条件下维持生长,并导致蘑菇在后期冲洗时营养质量得到改善。了解底物组成、渗透物剖面和子实体生理之间的相互作用为优化商业系统中的蘑菇产量和质量提供了新的途径。
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引用次数: 0
Glycerol as a potential solution for rotifer protection against predatory fungi in wastewater treatment 甘油作为污水处理中保护轮虫免受掠食性真菌侵害的潜在解决方案
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-11-06 DOI: 10.1016/j.funbio.2025.101687
Agnieszka Pajdak-Stós , Yuliia Korzh , Edyta Fiałkowska
Rotifers are key organisms in activated sludge, as they are able to increase flocculation, improve effluent quality and control activated sludge bulking caused by the overgrowth of filamentous bacteria. Unfortunately, their populations are endangered by predatory fungi, which are surprisingly common in wastewater treatment plants (WWTPs). Looking for a remedy, we found that glycerol could impair the condition of rotiferovorous fungi while posing no threats to rotifers. We conducted experiments on the effects of glycerol at concentrations ranging from 0.005 % to 0.1 % on the growth rate of predatory fungi and rotifer survival in the presence of fungi to determine whether glycerol could be applied as protection for rotifers in the case of fungal infection in WWTPs. Our results showed that glycerol negatively affected both Zoophagus and Lecoophagus fungi. In both cases, the number of rotifers surviving in the presence of predatory fungi was much greater after glycerol addition. In the case of the mature mycelium of Zoophagus, the number of active rotifers was more than ten times greater at 0.005 % glycerol and 25 times greater at 0.1 % glycerol. In the case of Lecophagus, the number of active rotifers was almost two times greater at 0.005 % glycerol but almost six times greater at 0.1 % glycerol. Our experiments shed new light on the possibility of using rotifers for bulking control even when activated sludge is infected by predatory fungi. Moreover, it is another, beside improvement of nutrients removal, potential advantage of glycerol application in WWTPs.
轮虫是活性污泥中的关键生物,可以增加絮凝作用,改善出水水质,控制丝状菌过度生长引起的活性污泥膨胀。不幸的是,它们的种群受到掠夺性真菌的威胁,这些真菌在污水处理厂(WWTPs)中非常普遍。为了寻找补救措施,我们发现甘油可以损害轮虫真菌的状况,同时对轮虫没有威胁。在真菌存在的情况下,研究了浓度为0.005% ~ 0.1%的甘油对掠食性真菌生长速率和轮虫存活率的影响,以确定甘油是否可以在污水处理场真菌感染的情况下对轮虫起到保护作用。结果表明,甘油对食虫菌和食藻菌均有负作用。在这两种情况下,添加甘油后,在有掠食性真菌存在的情况下存活的轮虫数量要大得多。在食虫虫成熟菌丝体中,0.005%甘油和0.1%甘油的活性轮虫数量分别是前者的10倍和25倍。在Lecophagus的例子中,活性轮虫的数量在0.005%甘油中几乎是2倍,而在0.1%甘油中几乎是6倍。我们的实验揭示了使用轮虫控制膨胀的可能性,即使活性污泥被掠夺性真菌感染。此外,甘油在污水处理厂的应用,除了改善营养物的去除,还有一个潜在的优势。
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引用次数: 0
Characterization and biocontrol of oomycetes recovered from a phytoremediation plant for the treatment of farmhouse wastewaters 农家乐废水植物修复厂回收卵菌的特性及生物防治
IF 3 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-10-27 DOI: 10.1016/j.funbio.2025.101686
Rossana Parlascino , Cristian Bua , Sebastiano Conti Taguali , Antonella Pane , Francesco Aloi , Nunzio Tuccitto , Santa Olga Cacciola
The reuse of wastewater for crop irrigation after treatment in constructed wetlands (CWs) represents an eco-friendly strategy to enhance agricultural sustainability. This study aimed to detect oomycete plant pathogens in wastewater from an agritouristic farm treated in CWs and reused for irrigation, and to evaluate antagonistic filamentous fungi as potential biocontrol agents (BCAs) of waterborne oomycetes. Three predominantly aquatic species, Phytophthora gonapodyidesP. inundata, and Phytopythium litorale, were isolated from CW water, whereas only terrestrial species, including P. citrophthoraP. nicotianae (the most frequent), and Phytopythium vexans, were recovered from soils of citrus orchards irrigated with reclaimed water. This difference suggests CW water is not a primary inoculum source for terrestrial pathogens under tested conditions. Among candidate BCAs, Trichoderma asperellumT. atrovirideT. harzianum, and Epicoccum nigrum significantly inhibited in vitro mycelial growth of the isolated oomycetes, with T. harzianum showing the strongest inhibition (69.17% against P. nicotianae). However, these BCAs were ineffective in controlling P. nicotianaeinfections on tomato seedlings when applied individually. Conversely, treatments either with the mixture of the three Trichoderma species or with the chitosan- and nosodes-based bioproducts Ascoma® and Verde® significantly reduced disease severity, indicating a synergistic effect among Trichoderma species in the soil rhizosphere.
人工湿地(CWs)处理后的废水用于作物灌溉,是一种提高农业可持续性的生态友好战略。本研究旨在检测某农业农场废水中的卵菌植物病原体,并评价拮抗丝状真菌作为水生卵菌的潜在生物防治剂(bca)。从连续水灌溉的柑橘园土壤中分离到3种主要的水生物种,即疫霉、淹没疫霉和litorale疫霉,而从再生水灌溉的柑橘园土壤中只分离到陆地物种,包括citrophthora、P. nicotiae(最常见)和vexans疫霉。这一差异表明,在测试条件下,连续水不是陆生病原体的主要接种源。在候选bca中,曲霉木霉、atroviride、哈茨霉霉和黑表表霉对分离卵菌的体外菌丝生长有显著抑制作用,其中哈茨霉对烟草假单胞菌的抑制作用最强(69.17%)。然而,单独施用bca对番茄幼苗的烟草假单抗感染效果不佳。相反,无论是混合使用三种木霉,还是使用壳聚糖和壳聚糖为基础的生物制品Ascoma®和Verde®,都能显著降低疾病严重程度,表明土壤根际木霉物种之间存在协同效应。
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Fungal biology
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