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The Prl3d1-Cre mouse line selectively induces the expression of Cre recombinase in parietal trophoblast giant cells Prl3d1-Cre 小鼠品系可选择性地诱导顶体滋养层巨细胞中 Cre 重组酶的表达
IF 1.5 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-12-20 DOI: 10.1002/dvg.23585
Linqing Pan, Fuquan Zhu, Aochen Yu, Yuan Jiang, Dayu Wang, Minglian Zhou, Chao Jia, Yugui Cui, Lisha Tang, Huaiyun Tang, Juan Li

The placenta plays a pivotal role in the maintenance of normal pregnancy, but how it forms, matures, and performs its function remains poorly understood. Here, we describe a novel mouse line (Prl3d1-iCre) that expresses iCre recombinase under the control of the endogenous prl3d1 promoter. Prl3d1 has been proposed as a marker for distinguishing trophoblast giant cells (TGCs) from other trophoblast cells in the placenta. The in vivo efficiency and specificity of the Cre line were analyzed by interbreeding Prl3d1-iCre mice with B6-G/R reporter mice. Through anatomical studies of the placenta and other tissues of Prl3d1-iCre/+; B6-G/R mouse mice, we found that the tdTomato signal was expressed in parietal trophoblast giant cells (P-TGCs). Thus, we report a mouse line with ectopic Cre expression in P-TGCs, which provides a valuable tool for studying human pathological pregnancies caused by implantation failure or abnormal trophoblast secretion due to aberrant gene regulation.

胎盘在维持正常妊娠中起着关键作用,但人们对胎盘如何形成、成熟和发挥其功能仍知之甚少。在这里,我们描述了一种新型小鼠品系(Prl3d1-iCre),该品系在内源性 prl3d1 启动子的控制下表达 iCre 重组酶。Prl3d1被认为是区分胎盘中滋养层巨细胞(TGC)和其他滋养层细胞的标志物。通过将 Prl3d1-iCre 小鼠与 B6-G/R 报告小鼠杂交,分析了 Cre 系的体内效率和特异性。通过对 Prl3d1-iCre/+; B6-G/R 小鼠胎盘和其他组织的解剖研究,我们发现tdTomato 信号在顶叶滋养层巨细胞(P-TGCs)中表达。因此,我们报告了一种在P-TGCs中异位表达Cre的小鼠品系,它为研究人类因植入失败或滋养层巨细胞分泌异常导致基因调控失常而引起的病理妊娠提供了一种有价值的工具。
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引用次数: 0
Generation of a Dcx-CreERT2 knock-in mouse for genetic manipulation of newborn neurons 利用 Dcx-CreERT2 基因敲入小鼠对新生神经元进行遗传操作。
IF 1.5 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-12-16 DOI: 10.1002/dvg.23584
Gabriella A. Perez, Kyung-Won Park, Denise Lanza, Jenna Cicardo, M. Danish Uddin, Joanna L. Jankowsky

A wide variety of CreERT2 driver lines are available for genetic manipulation of adult-born neurons in the mouse brain. These tools have been instrumental in studying fate potential, migration, circuit integration, and morphology of the stem cells supporting lifelong neurogenesis. Despite a wealth of tools, genetic manipulation of adult-born neurons for circuit and behavioral studies has been limited by poor specificity of many driver lines targeting early progenitor cells and by the inaccessibility of lines selective for later stages of neuronal maturation. We sought to address these limitations by creating a new CreERT2 driver line targeted to the endogenous mouse doublecortin locus as a marker of fate-specified neuroblasts and immature neurons. Our new model places a T2A-CreERT2 cassette immediately downstream of the Dcx coding sequence on the X chromosome, allowing expression of both Dcx and CreERT2 proteins in the endogenous spatiotemporal pattern for this gene. We demonstrate that the new mouse line drives expression of a Cre-dependent reporter throughout the brain in neonatal mice and in known neurogenic niches of adult animals. The line has been deposited with the Jackson Laboratory and should provide an accessible tool for studies targeting fate-restricted neuronal precursors.

有多种 CreERT2 驱动系可用于对小鼠大脑中的成神经元进行遗传操作。这些工具有助于研究支持终生神经发生的干细胞的命运潜能、迁移、电路整合和形态。尽管有丰富的工具,但由于许多针对早期祖细胞的驱动系特异性差,以及无法获得针对神经元成熟后期的选择性驱动系,用于电路和行为研究的成神经元遗传操作一直受到限制。为了解决这些局限性,我们创建了一种新的 CreERT2 驱动系,以内源性小鼠双皮质素基因座为靶点,作为命运特化神经母细胞和未成熟神经元的标记。我们的新模型将一个 T2A-CreERT2 盒紧贴在 X 染色体上 Dcx 编码序列的下游,从而允许 Dcx 和 CreERT2 蛋白以该基因的内源性时空模式表达。我们证明,新的小鼠品系能在新生小鼠的整个大脑和成年动物的已知神经源龛中驱动 Cre 依赖性报告基因的表达。该品系已存入杰克逊实验室,它将为针对命运受限神经元前体的研究提供一种可利用的工具。
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引用次数: 0
Epithelial-to-mesenchymal plasticity from development to disease: An introduction to the special issue 从发育到疾病的上皮-间质可塑性:特刊简介。
IF 1.5 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-12-14 DOI: 10.1002/dvg.23581
Hervé Acloque, Jing Yang, Eric Theveneau
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引用次数: 0
Generation of tamoxifen-inducible Tfap2b-CreERT2 mice using CRISPR-Cas9 利用 CRISPR-Cas9 生成他莫昔芬诱导型 Tfap2b-CreERT2 小鼠
IF 1.5 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-12-08 DOI: 10.1002/dvg.23582
Mingyi Zhang, Jifan Feng, Yue Li, Peter Z. Qin, Yang Chai

Tfap2b, a pivotal transcription factor, plays critical roles within neural crest cells and their derived lineage. To unravel the intricate lineage dynamics and contribution of these Tfap2b+ cells during craniofacial development, we established a Tfap2b-CreERT2 knock-in transgenic mouse line using the CRISPR-Cas9-mediated homologous direct repair. By breeding with tdTomato reporter mice and initiating Cre activity through tamoxifen induction at distinct developmental time points, we show the Tfap2b lineage within the key neural crest-derived domains, such as the facial mesenchyme, midbrain, cerebellum, spinal cord, and limbs. Notably, the migratory neurons stemming from the dorsal root ganglia are visible subsequent to Cre activity initiated at E8.5. Intriguingly, Tfap2b+ cells, serving as the progenitors for limb development, show activity predominantly commencing at E10.5. Across the mouse craniofacial landscape, Tfap2b exhibits a widespread presence throughout the facial organs. Here we validate its role as a marker of progenitors in tooth development and have confirmed that this process initiates from E12.5. Our study not only validates the Tfap2b-CreERT2 transgenic line, but also provides a powerful tool for lineage tracing and genetic targeting of Tfap2b-expressing cells and their progenitor in a temporally and spatially regulated manner during the intricate process of development and organogenesis.

Tfap2b是一种关键的转录因子,在神经嵴细胞及其衍生系中发挥着关键作用。为了揭示这些Tfap2b+细胞在颅面发育过程中错综复杂的系动态和贡献,我们利用CRISPR-Cas9介导的同源直接修复技术建立了Tfap2b-CreERT2基因敲入转基因小鼠系。通过与tdTomato报告小鼠进行育种,并在不同的发育时间点通过他莫昔芬诱导启动Cre活性,我们在关键的神经嵴衍生区域(如面部间质、中脑、小脑、脊髓和四肢)内展示了Tfap2b系。值得注意的是,在E8.5开始的Cre活动之后,可以看到源于背根神经节的迁移神经元。耐人寻味的是,作为四肢发育祖细胞的 Tfap2b+ 细胞主要在 E10.5 开始出现活性。在整个小鼠颅面结构中,Tfap2b 在整个面部器官中广泛存在。在这里,我们验证了它在牙齿发育过程中作为祖细胞标记的作用,并证实这一过程始于 E12.5。我们的研究不仅验证了 Tfap2b-CreERT2 转基因品系,而且还为在错综复杂的发育和器官形成过程中,以时间和空间调控的方式对表达 Tfap2b 的细胞及其祖细胞进行品系追踪和遗传定位提供了有力的工具。
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引用次数: 0
Ascidian gene regulation and bioadhesion 海鞘基因调控与生物粘附。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-27 DOI: 10.1002/dvg.23572
Ute Rothbächer
<p>During my university studies in Munich, Germany, I explored Zoology, Biochemistry, Parasitology, and Immunology to focus on tumor biology and melanoma formation in my Diploma and PhD projects in Judy Johnson's lab. She encouraged, guided, and provided maximal freedom for scientific thinking and all basic methods.</p><p>Cell specification and the plasticity of cell fate in response to surrounding signals and the resulting precise gene activation/repression mechanisms remain my strong interest. At the end of my PhD I came to three major conclusions: first, we cannot fully understand a pathological situation without knowing in depth about the normal genesis of cells along development; second, we need to study molecular mechanisms <i>in vivo</i> to avoid cell lineage artifacts; and third, we need to simplify things by using less complex but informative model organisms that can reveal evolutionarily conserved concepts.</p><p>For my post-doc, I chose <i>Xenopus</i> as an <i>in vivo</i> model at UC Irvine (Prof. Ken Cho lab) and Caltech Pasadena (Prof. Scott Fraser lab) to reveal conserved molecular players in embryonic signaling, notably that both <i>Drosophila</i> and <i>Xenopus</i> Dishevelled (Dsh) can mediate Wnt signaling in <i>Xenopus</i> secondary axis (Spemann's Organizer) formation (Rothbächer et al., <span>1995</span>; Rothbächer et al., <span>2000</span>). We also showed that non-canonical planar cell polarity signaling via Dsh controls gastrulation in vertebrates (Wallingford et al., <span>2000</span>) while the canonical ß-catenin from <i>Hydra</i> could induce complete secondary axes upon mRNA injection in <i>Xenopus</i> embryos (Hobmayer et al., <span>2000</span>).</p><p>During my postdoc time, my daughter was born and taught me the true miracles of life, also straightening out my priorities and my efficiency. Together, we thereafter moved to Marseille, France.</p><p>At that time tunicates (ascidians) were being established in Patrick Lemaire's lab at the Marseille Institute of Developmental Biology as a simpler chordate developmental model, and I soon realized that ascidians could give access to many questions that were rather difficult to address in <i>Xenopus</i>. As invertebrate chordates, their larvae resemble an evolutionary prototype for vertebrates! Transparency, few and large cells, and an invariant developmental lineage seemed truly amazing, in addition to techniques like electroporation <i>en masse</i> to allow for functional genomics in synchronized embryos. Here, I learned and co-developed many tools for <i>Ciona</i> functional genomics and I worked in collaboration with this lab for around 10 years while publishing my independent research work. Here, I also obtained the “habilitation to direct research” and supervised doctoral candidates. Discovering the earliest zygotic events and the regulatory DNA (enhancer) level of maternally activated target genes was my main interest in ascidians, and we revealed for example, that
在德国慕尼黑大学期间,我在Judy Johnson的实验室学习了动物学、生物化学、寄生虫学和免疫学,重点研究肿瘤生物学和黑色素瘤的形成。她鼓励、引导并给予科学思维和一切基本方法最大限度的自由。细胞规格和细胞命运的可塑性响应周围的信号和由此产生的精确的基因激活/抑制机制仍然是我的强烈兴趣。博士毕业后,我得出了三个主要结论:第一,如果不深入了解细胞在发育过程中的正常发生,我们就不能完全理解一种病理情况;其次,我们需要在体内研究分子机制,以避免细胞谱系伪影;第三,我们需要通过使用不那么复杂但信息丰富的模式生物来简化事情,这些模式生物可以揭示进化上保守的概念。在我的博士后研究中,我在加州大学欧文分校(Ken Cho教授实验室)和加州理工学院帕萨迪纳分校(Scott Fraser教授实验室)选择了爪蟾作为体内模型,以揭示胚胎信号传导中的保守分子参与者,特别是果蝇和凌乱的爪蟾(Dsh)都可以介导爪蟾次级轴(Spemann's Organizer)形成中的Wnt信号(Rothbächer等人,1995;Rothbächer et al., 2000)。我们还发现通过Dsh的非规范平面细胞极性信号控制脊椎动物的原肠胚形成(Wallingford et al., 2000),而来自Hydra的规范ß-catenin在向爪蟾胚胎注射mRNA后可以诱导完整的次级轴(Hobmayer et al., 2000)。在我做博士后期间,我的女儿出生了,她教会了我生命中真正的奇迹,也让我分清了轻重缓急,提高了效率。之后,我们一起搬到了法国马赛。当时,马赛发育生物学研究所的Patrick Lemaire的实验室正在建立被囊动物(海鞘动物),作为一种更简单的脊索动物发育模型,我很快意识到,海鞘动物可以提供许多在非洲爪类中很难解决的问题。作为无脊椎脊索动物,它们的幼虫类似于脊椎动物的进化原型!透明,细胞少而大,以及不变的发育谱系似乎真的令人惊叹,此外还有像电穿孔这样的技术,可以在同步胚胎中实现功能基因组学。在这里,我学习并共同开发了许多Ciona功能基因组学的工具,并与该实验室合作了大约10年,同时发表了自己的独立研究成果。在这里,我还获得了“指导研究资格”,并指导博士生。发现最早的合子事件和母体激活靶基因的调控DNA(增强子)水平是我对海鞘的主要兴趣,例如,我们发现指定外胚层细胞需要GATA因子,其作用范围受到ß-catenin的限制(Rothbächer et al., 2007)。2012年,我在奥地利因斯布鲁克大学成立了一个独立的囊状动物研究小组。我有很高的教学负担,但喜欢指导年轻的研究人员,也鼓励他们在Ciona开发新的实验方法(Kari et al., 2016)。我们继续研究了ß-catenin对GATA的抑制机制(Oda-Ishii et al., 2016),这让人想起秀丽隐杆线虫中相反的wnt/ß-catenin信号传导(Murgan et al., 2015)。同时,受到邻近团体和Ciona提供的技术可能性的启发,我设计了一个新的项目,旨在利用我们对海鞘生物粘附的了解来开发仿生胶(Davey et al., 2021)。该研究主要由女研究员樊曾(Fan Zeng)进行,她最初是博士研究生,目前是我实验室的博士后(图1),我们详细描述了Ciona感觉粘连乳头内的细胞(图2a,b;Zeng, Wunderer, Salvenmoser, Ederth, et al., 2019)以及这些细胞在幼虫沉降时分泌的粘附物质的粘附成分和标记物(Zeng, Wunderer, Salvenmoser, Hess, et al., 2019),并与另一组合作确定了乳头状细胞(Johnson et al., 2023)。目前,我们正在确定三种海鞘幼虫胶的分子组成,并进行了长读基因组测序以解决重复区域(未发表)。通过新型CRISPR技术,博士候选人Alessandro Pennati(图1)鉴定并表征了尾感觉神经元基因的保守顺式调控(图2c,d) (Papadogiannis et al., 2022)。他现在正在研究一种额外的抑制机制,进一步完善二元细胞的命运选择。可悲的是,我们对海鞘的研究越来越受到海洋变暖的影响,特别是北大西洋和地中海的繁殖季节似乎缩短了。
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引用次数: 0
Ciona, an ideal research organism to study the role of enhancers 一种理想的研究生物来研究增强剂的作用。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-27 DOI: 10.1002/dvg.23577
Emma Kirsten Farley

Watching documentaries as a child, I became fascinated by how genomes encode the instructions to make all the cells of an organism. I studied Biochemistry at Oxford University as the subject seemed to provide a mechanistic understanding of living systems. During my time at Oxford, I completed my part II thesis (similar to a master's project) in Prof. Doug Higgs' lab. I learned about the regulation of gene expression during development of blood cells and the disease ATRX which causes alpha thalassemia and neurological defects in patients via misregulation of gene expression. While we were studying the effects of this disease on gene expression within the blood system, I wondered if studying both the blood and the brain may help find generalizable principles and mechanisms driving the disease. For this reason, I wanted to do my Ph.D. in a system where I could study many different types of cells. I decided to work with stem cells and transcription factors involved in the specification of cell fate.

I did my Ph.D. at Imperial College London at the MRC London Medical Sciences Center with Dr. Meng Li. I studied how midbrain dopaminergic neurons are made in developing mouse and chick brains and applied this knowledge to stem cells to create dopaminergic neurons in a dish. The hope was that these stem cell-derived dopaminergic neurons would serve as a platform for drug screening and therapeutic approaches for patients with Parkinson's disease. While I value the stem cell system, at the time, it was not the ideal system to explore how genomes encode gene expression in time and space. My stem cell cultures were often heterogenous; a mixture of neural-like cells and other cells, most commonly cardiac cells beating in the dish. And one could never truly know if the cells in the dish recapitulated the endogenous dopaminergic neurons. Through my research experiences, I thought that experimental approaches in whole developing embryos would be better suited for understanding how our genomes encode the instructions for making an organism. I set about looking for a system in which I could study enhancers in high-throughput within whole developing organisms.

Prof. Mike Levine spoke about Ciona at a British Society of Developmental Biology meeting, and I was hooked. I realized that Ciona, with its close relation to vertebrates and the power of electroporation to incorporate plasmids into millions of embryos, would be an ideal organism for whole embryo high-throughput reporter assays to study enhancers. Thus, Ciona is an ideal system to decipher how the instructions for development are encoded in our genomes.

I started my postdoc with Prof. Mike Levine in 2012. I developed a synthetic enhancer library screen (SEL-seq) to test many millions of enhancers for activity in developing Ciona (Figure 1a). I used SEL-Seq to test 2.5 million variants of a neural Otx-a enhancer to examine how this enhancer activated by two pleiot

小时候看纪录片时,我对基因组如何编码指令以制造生物体的所有细胞着迷。我在牛津大学学习生物化学,因为这门学科似乎提供了对生命系统的机械理解。在牛津大学期间,我在Doug Higgs教授的实验室完成了我的第二部分论文(类似于硕士项目)。我了解了血细胞发育过程中基因表达的调控,以及通过基因表达失调导致α地中海贫血和患者神经系统缺陷的ATRX疾病。当我们研究这种疾病对血液系统内基因表达的影响时,我想知道同时研究血液和大脑是否有助于找到导致这种疾病的普遍原则和机制。出于这个原因,我想在一个可以研究许多不同类型细胞的系统中攻读博士学位。我决定研究干细胞和参与细胞命运规范的转录因子。我的博士学位是在伦敦帝国理工学院MRC伦敦医学科学中心和b孟Li博士一起完成的。我研究了中脑多巴胺能神经元是如何在发育中的老鼠和小鸡的大脑中产生的,并将这一知识应用于干细胞,在培养皿中产生多巴胺能神经元。希望这些干细胞衍生的多巴胺能神经元可以作为帕金森病患者药物筛选和治疗方法的平台。虽然我很重视干细胞系统,但在当时,它并不是探索基因组如何在时间和空间上编码基因表达的理想系统。我的干细胞培养通常是异质的;神经样细胞和其他细胞的混合物,最常见的是在培养皿中跳动的心脏细胞。而且,人们永远无法真正知道培养皿中的细胞是否再现了内源性多巴胺能神经元。通过我的研究经验,我认为在整个发育中的胚胎中进行实验方法将更适合于理解我们的基因组如何编码制造生物体的指令。我开始寻找一种系统,在这种系统中,我可以在整个发育生物体中研究高通量的增强剂。迈克·莱文(Mike Levine)在英国发育生物学学会的一次会议上谈到了乔娜,我被迷住了。我意识到,由于它与脊椎动物的密切关系以及电穿孔将质粒纳入数百万个胚胎的能力,Ciona将是全胚胎高通量报告基因试验研究增强子的理想生物。因此,Ciona是一个理想的系统来破译发育指令是如何在我们的基因组中编码的。2012年,我跟随Mike Levine教授开始了我的博士后研究。我开发了一个合成增强子库屏幕(SEL-seq)来测试数百万个增强子在开发Ciona中的活性(图1a)。我使用SEL-Seq测试了250万个神经Otx-a增强子的变体,以研究该增强子如何被两种多效因子(ETS和GATA)激活,从而编码前感觉囊泡和背神经索内的神经特异性表达(Farley等,2015)(图1b)。从这些筛选中,我们发现增强子需要低亲和力或次优亲和力的转录因子结合位点来正确编码组织特异性表达。如果这些低亲和力位点被高亲和力位点取代,那么增强子就不再局限于神经谱系,而是在FGF信号或GATA存在的许多其他组织中也有活性。这些研究表明,使用次优亲和位点对于确保增强子保持在ETS和GATA的组合控制下,并且仅在这两个因子的浓度恰到好处时才有活性至关重要。类似的结果也被报道,表明低亲和力的Hox位点对苍蝇的特异性很重要(Crocker等,2015)。我们还发现,内源性Otx-a序列中的位点组织(顺序、间距和方向)对于最高水平的转录并不是最佳的(Farley et al., 2015)。改变增强子内位点之间的间隔可以提高转录水平,从而增强神经表达。事实上,优化Otx-a增强子的亲和力和间距会导致组织特异性的完全丧失;表达不再局限于神经组织(a6.5和b6.5谱系),也见于脊索、内胚层和后感觉囊泡(图1b,c)。使用非优化组织的低亲和力位点可以防止单个因素对增强子的异常激活,这意味着需要组合控制来激活转录(Farley等,2015)。增强子包含令人难以置信的简并结合位点的认识令人担忧,因为这意味着增强子比我们最初想象的要复杂得多。幸运的是,我们注意到了结合位点的亲和力和组织之间的关系。 天然增强子内的低亲和力位点具有导致较高水平转录输出的组织,而高亲和力位点具有较小的转录输出最佳间隔。因此,亲和性和结合位点的组织(增强子语法)之间似乎存在相互作用(Farley et al., 2015;Farley et al., 2016;金达尔,法利,2021)。作为博士后和我自己的实验室,我们使用这些语法规则在基因组中寻找组织特异性增强子(Farley et al., 2016;Song et al., 2023)。在我自己位于加州大学圣地亚哥分校的实验室里,我继续利用Ciona进行高通量增强子筛选,以找到控制增强子的规则。我们已经发现了跨脊索动物的增强子语法特征——在狮子、老鼠和人类中(Song et al., 2023)。我们还扩展了对增强子监管原则的违反如何在Ciona和其他物种(如小鼠和人类)中驱动生物体水平的表型的研究(Jindal等人,2023;Lim et al., 2022)。我们发现单核苷酸变异(snv)可以增加结合位点亲和力,驱动异位表达和机体表型,严重程度可达Ciona的第二颗心脏和小鼠和人类的多余手指(Jindal等,2023;Lim et al., 2022)。因此,我们最初在Ciona中发现的发育增强子编码组织特异性表达的亚优化原理也适用于其他生物体。此外,违反这一原则导致了被囊动物和脊椎动物的主要表型。我非常感谢Mike Levine教授在我在Ciona研究高通量增强筛选时对我的支持。如果没有他,我不可能实现这些实验,这些实验构成了我在自己实验室进行研究的基础。虽然偶尔会有挑战,但莱文的实验室也很有趣。我从来没有见过这么多像我一样喜欢增强剂的人。我在莱文实验室的时光充满了令人兴奋的对话和头脑风暴,这帮助我成长为今天的科学家。现在,在我自己的实验室里,我喜欢一直被增强菌爱好者包围。到目前为止,已经有两名研究生和一名博士后从我的实验室毕业并进入了工业界。我的实验室现在由两名博士后,三名研究生和三名本科生组成(图2)。我希望他们中的许多人能留在Ciona社区。为了支持我的研究,我很幸运地获得了NIH新创新者奖、NSF职业奖和NHGRI R01。
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引用次数: 0
Women in tunicate research: Pioneers of the past and their present legacy 动物研究中的女性:过去的先驱和她们现在的遗产。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-27 DOI: 10.1002/dvg.23578
Marie L. Nydam, Mary Beth Saffo, Anna Di Gregorio

The search for female scientists who pioneered the research on tunicates is hindered by the tradition of reporting only the first initials of authors' names on scientific publications using only the initials of their first names. While this practice has the theoretical merit of broadening the readership by preventing the possible bias that could be caused by the gender of the author(s) in some of the readers, it rendered the identification of female researchers active in, or before, the first half of the 20th century quite challenging. Sifting through several dozen electronic records, and with the help of references and/or quotes found online, we have stitched together the information that we were able to retrieve on the life of female scientists who authored some of the earliest publications on tunicates, and we have organized them in (approximate) chronological order. We have also compiled brief synopses of the findings of scientists active in the field of tunicate biology in more recent times, and organized them by subdiscipline.

对研究被囊动物的女性科学家的研究受到了传统的阻碍,即在科学出版物上只报告作者名字的首字母缩写,只用他们名字的首字母缩写。虽然这种做法在理论上具有扩大读者群的优点,因为它可以防止某些读者中作者性别可能引起的偏见,但它使识别活跃于20世纪上半叶或之前的女性研究人员变得相当具有挑战性。筛选了几十份电子记录,并借助网上找到的参考文献和/或引文,我们将能够检索到的有关女性科学家生活的信息拼凑在一起,这些女性科学家撰写了一些关于被囊动物的最早出版物,我们按(大致)时间顺序将它们组织起来。我们还汇编了最近活跃在被囊动物生物学领域的科学家们的发现的简要概要,并按分支学科进行了组织。
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引用次数: 0
Searching for marine embryos, finding my path 寻找海洋胚胎,寻找我的路。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-22 DOI: 10.1002/dvg.23576
Anna Di Gregorio
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引用次数: 0
Generation and characterization of Chd7-iCreERT2-tdTomato mice Chd7-iCreERT2-tdTomato小鼠的产生和表征。
IF 1.5 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-22 DOI: 10.1002/dvg.23575
Zi'ang Han, Ze Wang, Zhuxi Huang, Weijun Feng

Heterozygous mutation of CHD7 gene causes a severe developmental disorder called CHARGE syndrome. In order to further explore the expression and function of Chd7 in vivo, we generated a Chd7-P2A-iCreERT2-P2A-tdTomato (in short, Chd7-CT-tdT) knockin mouse line using the CRISPR/Cas9 technology. The specificity and efficiency of two knockin genetic elements were validated. The Chd7-CT-tdT reporter gene could accurately reflect both the dynamic expression pattern of endogenous Chd7 during neurodevelopment and cell-type specific expression in the brain and eye. The recombination efficiency of Chd7-CT-tdT in postnatal cerebellum is very high. Moreover, lineage tracing experiment showed that Chd7 is expressed in intestinal stem cells. In summary, the newly constructed Chd7-CT-tdT mouse line provide a useful tool to study the function of Chd7.

CHD7基因的杂合突变会导致严重的发育障碍,称为CHARGE综合征。为了进一步探索Chd7在体内的表达和功能,我们利用CRISPR/Cas9技术构建了Chd7- p2a - icreert2 - p2a - tdtomato(简称Chd7- ct - tdt)敲入小鼠细胞系。验证了两个敲入基因元件的特异性和效率。Chd7- ct - tdt报告基因既能准确反映内源性Chd7在神经发育过程中的动态表达模式,又能准确反映脑、眼细胞类型特异性表达。Chd7-CT-tdT在出生后小脑中的重组效率非常高。此外,谱系追踪实验表明Chd7在肠干细胞中表达。综上所述,新构建的Chd7- ct - tdt小鼠系为研究Chd7的功能提供了有益的工具。
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引用次数: 0
1st International Symposium on Women in Tunicate Biology: Meeting report 第一届女性参与生殖生物学国际研讨会:会议报告。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-11-20 DOI: 10.1002/dvg.23571
Anna Di Gregorio, Marie L. Nydam
<p>The 1st International Symposium on Women in Tunicate Biology was held online on March 28 and 29, 2023. This global symposium was attended by 45–50 researchers from countries including Austria, Brazil, India, Italy, Japan, New Zealand, Turkey, and the United States. Figure 1 is a photograph of some of the participants from the March 28th session.</p><p>The main goals of this symposium were honoring women who advanced the field of tunicate biology, sharing current research interests, promoting collaborations, inspiring and supporting new and aspiring independent investigators, and fostering inclusivity. The symposium started its first day with biographical presentations of women scientists who pioneered the field, followed by tributes to recently retired female ascidiologists. The second day was mainly dedicated to presentations on the research currently being conducted by female principal investigators. On the first day, Anna Di Gregorio gave an introduction on the general history of tunicate research and then highlighted women who were active in the 19th and 20th centuries: Gladys Amelia Anslow from the United States, an accomplished physicist and first woman to work with the cyclotron at the University of California at Berkeley, who studied the effect of copper ions on ascidian metamorphosis; Helga Henriette Lindel Zwillenberg from Germany, who obtained the first images of chromosomes in ascidians through a method that she perfected for these organisms; Nel Krijgsman, from the Netherlands, who studied the pacemakers of the <i>Ciona</i> heart and the effects of different neurotransmitters on their function, and Winifred Parsons, who studied the transport of carbon dioxide in the blood of ascidians and other vertebrates during her residence at the Stazione Zoologica in Napoli (Naples), Italy.</p><p>There were three talks honoring Italian women researchers. Fiorenza De Bernardi presented a tribute to Giuseppina Ortolani, who gained international recognition for her lineage-tracing experiments in solitary ascidians and trained numerous students who later became leaders in various fields of tunicate biology. Lucia Manni presented on her mentor Giovanna Zaniolo, another exceptionally talented experimentalist who pioneered studies of regeneration, allorecognition, and aging in colonial ascidians. Filomena Ristoratore and Annamaria Locascio described the research interests and accomplishments of recently retired women scientists from the Stazione Zoologica in Napoli: Margherita Branno, Anna Palumbo, Rosaria De Santis, and Elisabetta Tosti. Then, Megan Wilson introduced Beryl Brewin, a taxonomist and ecologist from New Zealand who worked for nearly 30 years at the University of Otago. Brewin described more than 80 ascidian genera and species from Australia and New Zealand and made a large financial donation in her will to support the Portobello Marine Laboratory. Megan also presented her lab's research, discussing in particular the insights her group
第一届女性被囊生物学国际研讨会于2023年3月28日和29日在线举行。来自奥地利、巴西、印度、意大利、日本、新西兰、土耳其和美国等国的45-50名研究人员参加了这次全球研讨会。图1是3月28日会议的部分参与者的照片。本次研讨会的主要目标是表彰在动物生物学领域取得进步的女性,分享当前的研究兴趣,促进合作,激励和支持新的和有抱负的独立研究者,并促进包容性。研讨会的第一天以女性科学家的传记介绍开始,随后是对最近退休的女性海鞘学家的致敬。第二天主要是介绍女性首席研究员目前正在进行的研究。第一天,Anna Di Gregorio介绍了海鞘研究的一般历史,然后重点介绍了19世纪和20世纪活跃的女性:来自美国的Gladys Amelia Anslow,她是一位有成就的物理学家,也是第一位在加州大学伯克利分校使用回旋加速器的女性,她研究了铜离子对海鞘变形的影响;来自德国的Helga Henriette Lindel Zwillenberg,她通过一种她完善的方法获得了海鞘染色体的第一张图像;来自荷兰的Nel Krijgsman研究了Ciona心脏的起搏器和不同神经递质对其功能的影响,以及Winifred Parsons,她在意大利那不勒斯的动物园研究了海鞘和其他脊椎动物血液中二氧化碳的运输。有三场纪念意大利女性研究人员的演讲。Fiorenza De Bernardi向Giuseppina Ortolani致敬,Giuseppina Ortolani因其对孤立海鞘的谱系追踪实验而获得国际认可,并培养了许多学生,这些学生后来成为了各个领域的领导者。露西娅·曼尼介绍了她的导师乔凡娜·扎尼奥洛,另一位非常有才华的实验家,他是研究海鞘再生、异体识别和衰老的先驱。Filomena Ristoratore和Annamaria Locascio描述了最近从那不勒斯国家动物学研究所退休的女科学家的研究兴趣和成就:Margherita Branno, Anna Palumbo, Rosaria De Santis和Elisabetta Tosti。然后,梅根·威尔逊介绍了来自新西兰的分类学家和生态学家贝丽尔·布鲁因,她在奥塔哥大学工作了近30年。Brewin描述了来自澳大利亚和新西兰的80多个海鞘属和物种,并在遗嘱中为Portobello海洋实验室提供了大笔资金捐赠。梅根还介绍了她的实验室的研究,特别讨论了她的小组在理解芽叶杆菌全身再生现象方面从基因组学、转录组学和DNA可及性图谱中获得的见解。在她的演讲结束时,梅根描述了她的实验室和新西兰整个研究界在因COVID-19大流行而实施的长期封锁期间所遇到的挑战。接下来,Jhimli Mondal介绍了V. K. Meenakshi的生平和工作,他是一位来自印度的海鞘分类学家,激励了一代生物学家。米纳克什教授是第一位研究在印度海岸发现的海鞘物种的印度女性。她和她的合作者发表了在印度发现的几百个物种的新记录,并描述了10个新物种,其中一些在图2中有显示。Meenakshi博士在网上参加了研讨会,她的几名学生参加了研讨会,以表彰她的指导,分享他们对这一倡议的赞赏,并参加了其他报告。最后,玛丽·尼达姆强调了来自美国的格雷琴·兰伯特的研究和教育努力。自1968年以来,兰伯特与她深爱的丈夫查尔斯(Charles)一起发表了关于海asciard生物学、生态学和分类学的许多方面的文章。格雷琴和查尔斯·兰伯特非凡的研究成果得到了其他海鞘学家的表彰,他们以他们的名字命名了新发现的物种。图3中显示了一些例子,其中还包括一个新物种,Trididemnum alexi, Gretchen为纪念她的孙子Alex Coleman而亲切地命名为Trididemnum alexi。格雷琴也是一位热情的导师和教育家,自2001年以来组织和教授了至少25个分类学研讨会。 每年两次(近50年来!),Gretchen一直在准备“Ascidian News”,这是一份公告,正如她在每期中礼貌地澄清的那样,“不是科学文献的一部分”,但包含了最近发表的手稿的有用列表,并为任何想要与整个海洋科学界分享正在进行的项目,公告,出版物和成就的人提供了一个非官方平台。在研讨会的第二天,女性首席研究员对她们实验室正在进行的研究进行了总结。许多pi介绍了在她们的实验室里进行或支持这项工作的女性博士后、学生和工作人员。Izumi Oda-Ishii总结了日本女性海鞘研究人员的工作。她介绍了今井薰(Kaoru Imai)和德冈美纪(Miki Tokuoka)对琼脂草胚胎发生中基因调控网络的研究,佐藤惇子(Atsuko Sato)正在进行的琼脂草(Ciona robusta)和琼脂草(Ciona ninterinalis)及其杂交后代的研究,以及柴巴孝久(Kogiku Shiba)对精子鞭毛运动的生化和生物物理基础的研究。值得注意的是,所有这些研究人员都为本期特刊提供了个人贡献,详细描述了他们迷人的研究。然后Oda-Ishii讨论了她自己在Zic-r上的工作。a,一种编码一种转录因子的基因,这种转录因子对C. robusta胚胎中肌肉细胞的发育至关重要,也在神经系统中表达,并描述了她关于这种转录因子能够控制这些不同组织中基因表达的分子机制的发现。在这次演讲之后,Arzu Karahan解释了她在土耳其Erdemli的中东技术大学海洋科学研究所的实验室中进行的各种各样的Botrylloides研究项目。她的实验室研究包括物种鉴定、生命周期监测、生态基因组学、全基因组和转录组测序、全身再生过程中的基因相互作用以及干细胞衰老。来自美国的Susanna Lopez-Legentil专注于她最近在北卡罗来纳大学威尔明顿分校的工作:创建了当地海asciard物种的清单,检查了飓风干扰前后的相对丰度,编录了海asciard的多样性和海草床的丰度,并比较了海asciard种群之间的微生物共生。接下来,来自美国斯坦福大学的Ayelet Voskoboynik向Virginia (Ginny) Scofield、Kathi Ishizuka、Karla Palmeri在Botryllus schlosseri同种异体识别方面的工作致敬,并概述了她在干细胞龛位、干细胞衰老、中枢神经系统发育与退化、衰老动物生物钟基因表达变化等方面所做的影响深远的研究。她还描述了她和她的合作者开发的高通量测序新方法,并用于测序和组装薛氏杆菌基因组。最后,来自美国华盛顿大学的Billie Swalla向观众讲述了她的职业生涯,从本科时对海纹胚胎的迷恋到成为星期五港实验室的第一位女主任。她强调了她的实验室在Boltenia villosa, Corella inflata和Molgula spp.的发展,本地和非本地物种在萨利希海的分布方面的工作,表彰了她的导师Mary Rice(美国佛罗里达州皮尔斯堡史密森海洋站主任,1981年至2002年),并为年轻的女性科学家提供了宝贵的建议。安娜·迪·格雷戈里奥对这一倡议的目标作了总结。她主张在我们的出版物和网站上保护和宣传那些在被囊动物生物学领域取得进步的女性的工作,并分享了她的希望,这些演讲将促进现有实验室之间的合作,并激励年轻的研究人员继承
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引用次数: 0
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genesis
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