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Ciguatera poisoning: A review of the ecology and detection methods for Gambierdiscus and Fukuyoa species 雪卡毒中毒:Gambierdiscus 和 Fukuyoa 物种的生态学和检测方法综述
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-10-10 DOI: 10.1016/j.hal.2024.102735
Joseph C. Perkins , Kyall R. Zenger , Yang Liu , Jan M. Strugnell
Ciguatera poisoning is the most prevalent non-bacterial seafood illness globally, with an estimated 10,000 to 50,000 human cases reported annually. While most symptoms are generally mild, some cases can result in severe and long-lasting neurological and psychological damage, and in some instances, even death. The known causative agents of ciguatera poisoning are benthic toxic dinoflagellate species belonging to the genera Gambierdiscus and Fukuyoa. These species produce highly potent ciguatoxins that bioaccumulate through the marine food chain, eventually reaching humans through seafood consumption. Although Gambierdiscus and Fukuyoa species are widespread in tropical waters worldwide, the full extent of their distribution remains uncertain. This review provides a detailed examination of the ecological dynamics of these dinoflagellates and explores the diverse range of detection methods used to monitor them. These include a focus on molecular techniques for detection, alongside morphological methods, emerging technologies, and a toxin detection overview. Additionally, we offer recommendations on how the field can advance, highlighting novel solutions and next steps for improving detection and monitoring practices. By assessing the strengths and limitations of current approaches and proposing directions for future research, this review aims to support efforts in better understanding and mitigating the risk of ciguatera poisoning.
雪卡毒中毒是全球最常见的非细菌性海产品疾病,据估计每年有 10,000 至 50,000 例人类病例报告。虽然大多数症状一般比较轻微,但有些病例会导致严重和持久的神经和心理损伤,在某些情况下甚至会导致死亡。已知的雪卡毒中毒病原体是属于 Gambierdiscus 和 Fukuyoa 属的底栖有毒甲藻。这些种类产生的强效雪卡毒素通过海洋食物链进行生物累积,最终通过食用海产品到达人类体内。虽然 Gambierdiscus 和 Fukuyoa 物种广泛分布于世界各地的热带水域,但它们的分布范围仍不确定。本综述详细研究了这些甲藻的生态动态,并探讨了用于监测它们的各种检测方法。其中包括分子检测技术、形态学方法、新兴技术和毒素检测概述。此外,我们还就如何推动该领域的发展提出了建议,重点介绍了改进检测和监测实践的新型解决方案和下一步措施。通过评估当前方法的优势和局限性并提出未来研究的方向,本综述旨在为更好地了解和降低雪卡毒中毒风险提供支持。
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引用次数: 0
Defining algal bloom phenology in Lake Erie 伊利湖藻华物候的定义
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-10-09 DOI: 10.1016/j.hal.2024.102731
Timothy J. Maguire , Alain Isabwe , Craig A. Stow , Casey M. Godwin
Elucidating the impact of global climate change on aquatic ecosystems, particularly through phenological shifts in primary producers, is critical for understanding ecological resilience. Here, we focus on the phenological shifts in chlorophyll as a proxy for algae biomass and primary production in aquatic ecosystems, specifically in Lake Erie as well as concentrations of the toxin microcystin. By tracking temporal changes in each, we identified key phenological phases important to estimate duration, magnitude, and intensity of harmful algal blooms (HABs). Determining which influential biotic and abiotic factors such as temperature, wind speed, nutrient availability, and climate change is most important, is a long-term management need for Lake Erie, which can be explored using our methodology. Our novel statistical framework employing Bayesian generalized additive mixed models described seasonal chlorophyll and particulate microcystin concentration from Lake Erie and our simple geometric method identified the start, peak, and end of algal blooms. This research enhances our understanding of the ecological effects of nutrient pollution on aquatic ecosystems and provides a repeatable method for determining phenological events without the need for user defined cutoffs which aids in the management and mitigation of HABs, safeguarding water quality in regions dependent on lakes for drinking water.
阐明全球气候变化对水生生态系统的影响,特别是通过初级生产者的物候变化产生的影响,对于了解生态恢复能力至关重要。在这里,我们重点研究了作为水生生态系统(特别是伊利湖)中藻类生物量和初级生产量替代物的叶绿素的物候变化以及毒素微囊藻毒素的浓度。通过跟踪叶绿素和微囊藻毒素的时间变化,我们确定了对估计有害藻华(HABs)的持续时间、规模和强度非常重要的关键物候期。确定哪些生物和非生物影响因素(如温度、风速、营养供应和气候变化)最为重要,是伊利湖的一项长期管理需求,可以利用我们的方法进行探索。我们采用贝叶斯广义加性混合模型的新型统计框架描述了伊利湖的季节性叶绿素和微粒微囊藻毒素浓度,我们的简单几何方法确定了藻华的开始、高峰和结束时间。这项研究加深了我们对营养物污染对水生生态系统生态影响的理解,并提供了一种可重复的方法来确定物候事件,而无需用户定义临界值,这有助于管理和缓解有害藻类繁殖,保护依赖湖泊提供饮用水的地区的水质。
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引用次数: 0
Predator-induced defense decreases growth rate and photoprotective capacity in a nitrogen-limited dinoflagellate, Alexandrium minutum 捕食者诱导的防御会降低限氮甲藻 Alexandrium minutum 的生长速度和光保护能力
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-10-03 DOI: 10.1016/j.hal.2024.102734
Jingjing Zhang , Fredrik Ryderheim , Erik Selander , Urban Wünsch , Thomas Kiørboe
Some dinoflagellates produce toxic secondary metabolites that correlate with increased resistance to grazers. The allocation costs of toxin production have been repeatedly addressed, but with conflicting results. Few studies have considered the potential costs of this defense to the photosystem, even though defense toxins (e.g., karlotoxins and brevetoxins) are closely linked to the photoprotective process. Here, we used chemical cues from copepods to induce paralytic shellfish toxin (PST) production in resource-limited Alexandrium minutum and quantitatively determined the growth rate and potential trade-offs with the photosystem process. The results show that grazer-induced, more toxic A. minutum had larger cell volume, lower cell division rate, and lower pigment content under nitrogen-limited conditions than control cells. In addition, predator cues led to a lower relative abundance of photoprotective xanthophylls and a reduced de-epoxidation efficiency of the xanthophyll cycle under high light conditions, reducing the ability of the cells to resist photodamage. Decreased photoprotective capacity may reflect an overlooked defense cost of toxin production.
一些甲藻会产生有毒的次级代谢产物,从而增强对食草动物的抵抗力。毒素生产的分配成本已被反复讨论,但结果却相互矛盾。尽管防御毒素(如卡洛毒素和布里维毒素)与光保护过程密切相关,但很少有研究考虑这种防御对光合系统的潜在成本。在这里,我们利用桡足类的化学线索诱导资源有限的小亚历山大藻产生麻痹性贝类毒素(PST),并定量测定了其生长速度以及与光系统过程之间的潜在权衡。结果表明,在氮限制条件下,与对照细胞相比,捕食者诱导的毒性更强的小亚历山大体细胞体积更大,细胞分裂率更低,色素含量更低。此外,捕食者线索导致光保护黄绿素的相对丰度降低,黄绿素循环在强光条件下的去氧化效率降低,从而降低了细胞抵抗光损伤的能力。光保护能力的降低可能反映了被忽视的毒素产生的防御成本。
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引用次数: 0
The occurrence patterns and alternative host use of the generalist parasitoid Parvilucifera infectans (Alveolata, Perkinsozoa) of marine dinoflagellates revealed by a high-frequency time series microscopic data at a temperate coastal site 温带沿海地区高频时间序列显微数据揭示的海洋甲藻通性寄生虫 Parvilucifera infectans(藻类,近缘动物)的出现模式和替代宿主利用情况
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-30 DOI: 10.1016/j.hal.2024.102732
Boo Seong Jeon, Myung Gil Park
Species belonging to the genus Parvilucifera (Alveolata, Perkinsozoa) are known as generalist parasitoids that can infect a variety of marine dinoflagellates and ultimately kill the host cell. Despite the accumulation of knowledge on Parvilucifera parasitoids over the last twenty years, the occurrence pattern and use of alternative hosts for persistent transmission within fluctuating natural dinoflagellate host communities have received relatively little attention. To address this, high-frequency (i.e., daily) time series protist monitoring was conducted for 411 days, from April 2020 to May 2021, at a temperate coastal site in Jinhae Bay, Republic of Korea. This site was characterized by frequent blooms of mixed dinoflagellates throughout most of the year. Nonetheless, Parvilucifera infections were detected only in the spring seasons, and its occurrence pattern was primarily governed by the presence and cell density of its primary dinoflagellate host, Akashiwo sanguinea. As long as the primary host was present at high densities (greater than 104 cells L-1), this primary host alone could support the transmission and persistence of the parasitoid. However, if the cell density of the primary host started to decline, then Parvilucifera searched for and exploited alternative hosts for its continued survival. Taken together, this study suggests that the presence and cell density of its preferred primary host species and the duration for which the density remains above the threshold level are key factors that regulate the timing of Parvilucifera occurrence and alternative host use.
众所周知,Parvilucifera(甲壳纲,鲈形目)属的物种是通性寄生虫,可感染多种海洋甲藻,并最终杀死宿主细胞。尽管在过去二十年中积累了大量有关 Parvilucifera 寄生虫的知识,但在波动的天然甲藻寄主群落中,寄生虫的出现模式和利用替代寄主进行持续传播的情况却很少受到关注。为了解决这个问题,从 2020 年 4 月到 2021 年 5 月,在大韩民国镇海湾的一个温带沿海地点进行了长达 411 天的高频率(即每日)时间序列原生动物监测。该地点全年大部分时间都经常出现混合甲藻藻华。然而,只有在春季才能检测到 Parvilucifera 感染,其发生模式主要取决于其主要甲藻宿主 Akashiwo sanguinea 的存在和细胞密度。只要主寄主的细胞密度较高(大于 104 个细胞 L-1),寄生虫就能通过主寄主传播并存活下来。但是,如果主寄主的细胞密度开始下降,Parvilucifera 就会寻找并利用其他寄主来继续生存。综合来看,这项研究表明,其首选的主要寄主物种的存在和细胞密度,以及该密度保持在阈值水平以上的持续时间,是调节 Parvilucifera 出现和利用替代寄主的时间的关键因素。
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引用次数: 0
An early-warning forecast model for red tide (Karenia brevis) blooms on the southwest coast of Florida 佛罗里达西南海岸赤潮(Karenia brevis)绽放预警预报模型
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-24 DOI: 10.1016/j.hal.2024.102729
Miles Medina , Paul Julian II , Nicholas Chin , Stephen E. Davis
Karenia brevis blooms occur nearly annually along the southwest coast of Florida, and effective mitigation of ecological, public health, and economic impacts requires reliable real-time forecasting. We present two boosted random forest models that predict the weekly maximum K. brevis abundance category across the Greater Charlotte Harbor estuaries over one-week and four-week forecast horizons. The feature set was restricted to data available in near-real time, consistent with adoption of the models as decision-support tools. Features include current and lagged K. brevis abundance statistics, Loop Current position, sea surface temperature, sea level, and riverine discharges and nitrogen concentrations. During cross-validation, the one-week and four-week forecasts exhibited 73 % and 84 % accuracy, respectively, during the 2010–2023 study period. In addition, we assessed the models’ reliability in forecasting the onset of 10 bloom events on time or in advance; the one-week and four-week models anticipated the onset eight times and five times, respectively.
佛罗里达州西南沿岸几乎每年都会出现卡伦氏藻华(Karenia brevis bloom),要有效减轻其对生态、公共健康和经济的影响,就必须进行可靠的实时预测。我们提出了两个提升随机森林模型,可预测大夏洛特港河口每周最大 K. brevis 丰度类别,预测范围分别为一周和四周。特征集仅限于近实时数据,这与将模型作为决策支持工具是一致的。特征包括当前和滞后的 K. brevis 丰度统计、环流位置、海面温度、海平面以及河流排水量和氮浓度。在交叉验证过程中,在 2010-2023 年研究期间,一周和四周预报的准确率分别为 73% 和 84%。此外,我们还评估了模型按时或提前预报 10 次水华事件的可靠性;一周和四周模型分别预报了 8 次和 5 次水华事件。
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引用次数: 0
Explainable machine learning for predicting diarrhetic shellfish poisoning events in the Adriatic Sea using long-term monitoring data 利用长期监测数据预测亚得里亚海腹泻性贝类中毒事件的可解释机器学习
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-23 DOI: 10.1016/j.hal.2024.102728
Martin Marzidovšek , Janja Francé , Vid Podpečan , Stanka Vadnjal , Jožica Dolenc , Patricija Mozetič
In this study, explainable machine learning techniques are applied to predict the toxicity of mussels in the Gulf of Trieste (Adriatic Sea) caused by harmful algal blooms. By analysing a newly created 28-year dataset containing records of toxic phytoplankton in mussel farming areas and diarrhetic shellfish toxins in mussels (Mytilus galloprovincialis), we train and evaluate the performance of machine learning (ML) models to accurately predict diarrhetic shellfish poisoning (DSP) events. Based on the F1 score, the random forest model provided the best prediction of toxicity results at which the harvesting of mussels is stopped according to EU regulations. Explainability methods such as permutation importance and Shapley Additive Explanations (SHAP) identified key species (Dinophysis fortii and D. caudata) and environmental factors (salinity, river discharge and precipitation) as the best predictors of DSP toxins above regulatory limits. These findings are important for improving early warning systems, which until now were based solely on empirically defined alert abundances of DSP species. They provide experts, aquaculture practitioners, and authorities with additional information to make informed risk management decisions.
本研究将可解释的机器学习技术应用于预测的里雅斯特湾(亚得里亚海)因有害藻类大量繁殖而导致的贻贝毒性。通过分析新创建的 28 年数据集,其中包含贻贝养殖区有毒浮游植物和贻贝(Mytilus galloprovincialis)腹泻性贝类毒素的记录,我们训练并评估了机器学习(ML)模型的性能,以准确预测腹泻性贝类中毒(DSP)事件。根据 F1 分数,随机森林模型能最好地预测毒性结果,根据欧盟法规,在该结果出现时应停止收获贻贝。可解释性方法(如置换重要性和夏普利加法解释(SHAP))确定了关键物种(Dinophysis fortii 和 D. caudata)和环境因素(盐度、河流排水量和降水量)是预测 DSP 毒素超过法规限值的最佳指标。这些发现对改进早期预警系统非常重要,因为到目前为止,早期预警系统仅基于经验定义的 DSP 物种警戒丰度。它们为专家、水产养殖从业人员和当局提供了更多信息,以便做出明智的风险管理决定。
{"title":"Explainable machine learning for predicting diarrhetic shellfish poisoning events in the Adriatic Sea using long-term monitoring data","authors":"Martin Marzidovšek ,&nbsp;Janja Francé ,&nbsp;Vid Podpečan ,&nbsp;Stanka Vadnjal ,&nbsp;Jožica Dolenc ,&nbsp;Patricija Mozetič","doi":"10.1016/j.hal.2024.102728","DOIUrl":"10.1016/j.hal.2024.102728","url":null,"abstract":"<div><div>In this study, explainable machine learning techniques are applied to predict the toxicity of mussels in the Gulf of Trieste (Adriatic Sea) caused by harmful algal blooms. By analysing a newly created 28-year dataset containing records of toxic phytoplankton in mussel farming areas and diarrhetic shellfish toxins in mussels (<em>Mytilus galloprovincialis</em>), we train and evaluate the performance of machine learning (ML) models to accurately predict diarrhetic shellfish poisoning (DSP) events. Based on the F1 score, the random forest model provided the best prediction of toxicity results at which the harvesting of mussels is stopped according to EU regulations. Explainability methods such as permutation importance and Shapley Additive Explanations (SHAP) identified key species (<em>Dinophysis fortii</em> and <em>D. caudata</em>) and environmental factors (salinity, river discharge and precipitation) as the best predictors of DSP toxins above regulatory limits. These findings are important for improving early warning systems, which until now were based solely on empirically defined alert abundances of DSP species. They provide experts, aquaculture practitioners, and authorities with additional information to make informed risk management decisions.</div></div>","PeriodicalId":12897,"journal":{"name":"Harmful Algae","volume":"139 ","pages":"Article 102728"},"PeriodicalIF":5.5,"publicationDate":"2024-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142357964","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prevalence and distribution of dissolved paralytic shellfish toxins in seawater in the Yellow Sea and the Bohai Sea, China 中国黄海和渤海海水中溶解性麻痹性贝类毒素的流行和分布情况
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-22 DOI: 10.1016/j.hal.2024.102730
Xiaoyun Wang , Jiangbing Qiu , Dongyue Li , Aifeng Li
Paralytic shellfish toxins (PSTs) could be secreted by PSTs-producing microalgae or released by ruptured cells in seawater. In this study, the distribution of dissolved PSTs in the Yellow Sea and the Bohai Sea, China, was investigated by two cruises in April and July 2023. Seawater samples were collected from the surface, middle and bottom layers, and the profiles of PSTs were analyzed by liquid chromatography-tandem mass spectrometry (LC-MS/MS), and the spatial distribution characteristics of dissolved PSTs and their correlation with environmental factors were explored. Results showed that C1/2, GTX1/4, GTX2/3 and dcGTX2/3, were detected in seawater samples in both spring and summer, with the detection rates 100 % and 97.6 %, respectively. The total PST (ΣPSTs) concentrations ranged in 12 ∼ 590 pmol L−1, 9.3 ∼ 546 pmol L−1, 12 ∼ 2,452 pmol L−1, and not detected (nd) ∼ 188 pmol L−1 in seawater samples collected from the surface, middle and bottom layers in spring, and the surface layer in summer, respectively. Concentrations of PSTs markedly varied in the vertical water column in different sea regions. Generally, concentrations of ΣPSTs in the bottom seawater were higher than those in the surface and middle layers in the Bohai Sea and the North Yellow Sea, but no significant difference in the different water layers in the South Yellow Sea. In addition, concentrations of ΣPSTs in surface waters were much lower in summer than those in spring. In both spring and summer, dissolved PSTs in surface seawater were mainly distributed in the South Yellow Sea. These results indicate that PSTs were prevalent in the Yellow Sea and the Bohai Sea, of which the potential hazard to marine organisms should be highly concerned.
麻痹性贝类毒素(PSTs)可能由产生 PSTs 的微藻分泌,或由海水中破裂的细胞释放。本研究通过 2023 年 4 月和 7 月的两次航行,调查了中国黄海和渤海溶解性 PSTs 的分布情况。从表层、中层和底层采集海水样品,采用液相色谱-串联质谱法(LC-MS/MS)分析了溶解性 PSTs 的谱图,探讨了溶解性 PSTs 的空间分布特征及其与环境因子的相关性。结果表明,春季和夏季海水样品中均检出了 C1/2、GTX1/4、GTX2/3 和 dcGTX2/3,检出率分别为 100 % 和 97.6 %。春季在表层、中层和底层以及夏季在表层采集的海水样品中,总 PST(ΣPSTs)浓度分别为 12 ∼ 590 pmol L-1、9.3 ∼ 546 pmol L-1、12 ∼ 2,452 pmol L-1,未检出(nd)∼ 188 pmol L-1。在不同海区的垂直水体中,PST 的浓度存在明显差异。一般来说,渤海和北黄海底层海水中的ΣPSTs浓度高于表层和中层海水,而南黄海不同水层的ΣPSTs浓度无明显差异。此外,夏季表层海水中 ΣPSTs 的浓度远低于春季。在春季和夏季,表层海水中溶解的 PSTs 主要分布在南黄海。这些结果表明,PSTs 在黄海和渤海中普遍存在,其对海洋生物的潜在危害应引起高度关注。
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引用次数: 0
Potential siderophore-dependent mutualism in the harmful dinoflagellate Alexandrium pacificum (Group IV) and bacterium Photobacterium sp. TY1-4 under iron-limited conditions 有害甲藻亚历山大藻(第 IV 组)与光杆菌 TY1-4 在铁限制条件下可能存在的依赖苷元的互生关系
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-20 DOI: 10.1016/j.hal.2024.102726
Yue Jiang , Hyeon Ho Shin , Bum Soo Park , Zhun Li
Specific bacterial species induce algal blooms by producing growth-promoting substances, such as siderophores, under iron-limited conditions. However, the molecular mechanisms underlying these effects remain poorly understood. This study investigates the interactions between the harmful dinoflagellate Alexandrium pacificum (Group IV) and siderophore-producing bacteria, with a focus on iron acquisition facilitated by bacterial siderophores. During algal bloom seasons in the South Sea of Korea, Photobacterium sp. TY1-4 was isolated, which enhances A. pacificum cell density under iron-deficient conditions, TY1-4 can use the sterile exudates from A. pacificum as the sole source of carbon, suggesting a mutualistic relationship. Transcriptomic and genomic analyses revealed siderophore-mediated redox-based signaling and non-reductive pathways enhancing iron bioavailability. Photobacterium sp. TY1-4 initiates siderophore production through quorum sensing, whereas A. pacificum utilizes specific receptors and transporters for hydroxamate-type siderophores (ApFHUA and ApFHUC) to uptake iron. Three redox key iron-uptake genes were also identified in A. pacificum: membrane-bound ferroxidase ApFET3, high-affinity iron permease ApFTR1, and ferric-chelate reductases/oxidoreductases ApFRE1, with transcription levels inversely related to bioavailable iron. Increased iron bioavailability mediated by siderophores alleviates iron stress in A. pacificum, supporting its growth in iron-scarce environments. Additionally, A. pacificum co-cultured with Photobacterium sp. TY1-4 synthesized high-toxicity STXs, including GTX4, GTX2, and STX. These findings highlight the critical role of bacterial siderophores in iron binding and their potential impact on harmful algal bloom dynamics.
在铁有限的条件下,特定的细菌物种会产生促进生长的物质,如嗜苷酸盐,从而诱发藻华。然而,人们对这些效应的分子机制仍然知之甚少。本研究调查了有害甲藻亚历山大藻(第 IV 组)与产生嗜凫藻的细菌之间的相互作用,重点是细菌嗜凫藻促进铁的获取。在韩国南海藻类大量繁殖的季节,分离出了光杆菌 TY1-4,它能在缺铁条件下提高太平洋亚历山大藻的细胞密度,TY1-4 能利用太平洋亚历山大藻的无菌渗出物作为唯一的碳源,这表明两者之间存在互利关系。转录组和基因组分析揭示了苷元介导的基于氧化还原的信号传导和非还原途径,可提高铁的生物利用率。光杆菌(Photobacterium sp. TY1-4)通过法定人数感应(quorum sensing)产生苷酸,而太平洋蝇(A. pacificum)则利用羟基氨基甲酸酯型苷酸的特异受体和转运体(ApFHUA 和 ApFHUC)来吸收铁。在太平洋蛙中还发现了三个氧化还原关键铁吸收基因:膜结合铁氧化酶 ApFET3、高亲和力铁渗透酶 ApFTR1 和铁螯合还原酶/氧化还原酶 ApFRE1,其转录水平与生物可用铁成反比。嗜苷铁元素介导的铁生物利用率的增加缓解了太平洋蛙的铁压力,支持其在缺铁环境中生长。此外,与光杆菌 TY1-4 共同培养的太平洋蛙能合成高毒性 STX,包括 GTX4、GTX2 和 STX。这些发现凸显了细菌嗜苷酸盐在铁结合中的关键作用及其对有害藻华动态的潜在影响。
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引用次数: 0
Response to the CO2 concentrating mechanisms and transcriptional time series analysis of Ulva prolifera under inorganic carbon limitation 无机碳限制下莼菜对二氧化碳浓缩机制的响应及转录时间序列分析
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-19 DOI: 10.1016/j.hal.2024.102727
Jingyi Sun , Wei Dai , Shuang Zhao , Jinlin Liu , Jianheng Zhang , Juntian Xu , Peimin He
Ulva prolifera is a dominant species in green tides and has been affecting marine ecosystem for many years. Due to the low availability of CO2 in the environment, U. prolifera utilizes the CO2 concentrating mechanisms (CCMs) to increase intracellular inorganic carbon concentration. However, the transcriptional response mechanism and temporal changes of U. prolifera CCMs based on transcriptomics have not been thoroughly described. Therefore, we induced U. prolifera CCMs in a low CO2 environment to explore the dynamic regulation of CCMs expression under inadequate inorganic carbon supply. The results showed that inorganic carbon limitation increased the inorganic carbon affinity of U. prolifera, upregulating CCMs. The first 24 h of inorganic carbon environmental changes were the most active period for U. prolifera's expression regulation. U. prolifera gradually achieved a new steady state by regulating metabolic processes such as nucleic acids, energy, and ethylene-activated signaling pathways. In the carbon fixation system of U. prolifera, there are characteristics of both biophysical and biochemical CCMs. After 24 h of inorganic carbon limitation, the biophysical CCMs becomes more effective under conditions of inorganic carbon depletion. This study aids in exploring the CCMs of U. prolifera and their evolution in response to environmental changes.
莼菜是绿潮中的主要物种,多年来一直影响着海洋生态系统。由于环境中的二氧化碳含量较低,增殖莼利用二氧化碳浓缩机制(CCMs)来增加细胞内的无机碳浓度。然而,基于转录组学的 U. prolifera CCMs 的转录响应机制和时序变化尚未得到详尽描述。因此,我们在低二氧化碳环境中诱导 U. prolifera CCMs,探索无机碳供应不足条件下 CCMs 表达的动态调控。结果表明,无机碳限制增加了 U. prolifera 对无机碳的亲和力,从而上调了 CCMs 的表达。无机碳环境变化的前 24 小时是 U. prolifera 表达调控最活跃的时期。通过调节核酸、能量和乙烯激活的信号通路等代谢过程,增殖紫云英逐渐达到新的稳定状态。在 U. prolifera 的碳固定系统中,既有生物物理 CCM 的特点,也有生物化学 CCM 的特点。无机碳限制 24 小时后,生物物理 CCM 在无机碳耗竭条件下变得更加有效。这项研究有助于探索 U. prolifera 的 CCMs 及其在环境变化中的演变。
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引用次数: 0
Production of extracellular superoxide contributes to photosynthesis via elimination of reducing power and regeneration of NADP+ in the red-tide-forming raphidophyte Chattonella marina complex 在形成红色潮汐的虹彩叶藻 Chattonella marina 复合体中,细胞外超氧化物的产生通过消除还原力和再生 NADP+ 促进光合作用
IF 5.5 1区 生物学 Q1 MARINE & FRESHWATER BIOLOGY Pub Date : 2024-09-13 DOI: 10.1016/j.hal.2024.102712
Koki Yuasa , Takayoshi Ichikawa , Yuma Ishikawa , Haruhiko Jimbo , Maki Kawai-Yamada , Tomoyuki Shikata , Yoshitaka Nishiyama

The raphidophyte Chattonella marina complex (hereafter Chattonella) consists of noxious red-tide-forming algae that are damaging to fish farms. Chattonella produces and secretes large amounts of the superoxide anion (•O2), and the production of extracellular •O2 has been associated with fish mortality. We reported previously that photosynthetic electron transport is correlated with the production of •O2 in the genus Chattonella. However, the physiological roles of the production of extracellular •O2 remain to be clarified. In the present study, we examined the effects of the production of extracellular •O2 on photosynthesis and cell proliferation in two strains of Chattonella, namely, Ago03, a highly toxic strain that produces large amounts of •O2 externally, and Ago04, a low-toxicity strain that produces very small amounts of •O2. Both the growth rate and the net photosynthetic activity of Ago04 were higher than those of Ago03. In Ago04, levels of Rubisco and 3-phosphoglycerate, the product of the reaction catalyzed by Rubisco, were 4-fold higher than those in Ago03, suggesting the higher photosynthetic activity of Ago04. In the presence of glycolaldehyde, a specific inhibitor of the Calvin-Benson cycle, the levels of NADP+ and the photosynthetic parameter qP declined under strong light in Ago04. By contrast, levels of NADP+ and qP in Ago03 changed less significantly than those in Ago04. Given that •O2 is produced by a putative NADPH oxidase that converts O2 to •O2 in Chattonella, it seems likely that the production of •O2 might play a role not only in the elimination of excess reducing power of NADPH from the cell, via •O2, but also in the regeneration of NADP+, as a result of the action of NADPH oxidase, which oxidizes NADPH, to maintain photosynthetic electron transport.

虹彩藻类 Chattonella marina 复合体(以下简称 Chattonella)由有害的红潮形成藻类组成,对养鱼场具有破坏性。这种藻产生并分泌大量超氧阴离子(-O2-),细胞外-O2-的产生与鱼类死亡有关。我们以前曾报道过,光合电子传递与沙顿氏菌属中-O2-的产生有关。然而,细胞外-O2-产生的生理作用仍有待明确。在本研究中,我们研究了细胞外-O2-的产生对两株Chattonella光合作用和细胞增殖的影响,即外部产生大量-O2-的高毒性菌株Ago03和产生极少量-O2-的低毒性菌株Ago04。Ago04 的生长速率和净光合活性均高于 Ago03。在 Ago04 中,Rubisco 和 Rubisco 催化反应的产物 3-磷酸甘油酸的含量是 Ago03 的 4 倍,这表明 Ago04 的光合作用活性更高。在强光下,当卡尔文-本森循环的特异性抑制剂乙醛存在时,Ago04 的 NADP+ 水平和光合参数 qP 下降。相比之下,Ago03 的 NADP+ 和 qP 水平变化不如 Ago04 那么明显。鉴于-O2-是由一种推定的 NADPH 氧化酶产生的,该氧化酶可将 O2 转化为-O2-,因此-O2-的产生不仅可能通过-O2-消除细胞中过剩的 NADPH 还原能力,还可能通过 NADPH 氧化酶的作用再生 NADP+,从而维持光合电子传递。
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Harmful Algae
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