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Deciphering the molecular toolkit: regulatory elements governing shell biomineralization in marine molluscs. 解密分子工具包:海洋软体动物贝壳生物矿化的调控要素。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-18 DOI: 10.1111/1749-4877.12876
Zhuoqing Li, Meijie Yang, Cong Zhou, Pu Shi, Pengpeng Hu, Bin Liang, Qingtian Jiang, Lili Zhang, Xiaoyan Liu, Changping Lai, Tao Zhang, Hao Song

The intricate process of shell biomineralization in marine molluscs is governed by a complex interplay of regulatory elements, encompassing secretomes, transporters, and noncoding RNA. This review delves into recent advancements in understanding these regulatory mechanisms, emphasizing their significance in elucidating the functions and evolutionary dynamics of the molluscan shell biomineralization process. Central to this intricate orchestration are secretomes with diverse functional domains, selectively exported to the extrapallial space, which directly regulate crystal growth and morphology. Transporters are crucial for substrate transportation in the calcification and maintenance of cellular homeostasis. Beyond proteins and transporters, noncoding RNA molecules are integral components influencing shell biomineralization. This review underscores the nonnegligible roles played by these genetic elements at the molecular level. To comprehend the complexity of biomineralization in mollusc, we explore the origin and evolutionary history of regulatory elements, primarily secretomes. While some elements have recently evolved, others are ancient genes that have been co-opted into the biomineralization toolkit. These elements undergo structural and functional evolution through rapidly evolving repetitive low-complexity domains and domain gain/loss/rearrangements, ultimately shaping a distinctive set of secretomes characterized by both conserved features and evolutionary innovations. This comprehensive review enhances our understanding of molluscan biomineralization at the molecular and genetic levels.

海洋软体动物复杂的贝壳生物矿化过程受复杂的调控要素相互作用的支配,其中包括分泌体、转运体和非编码 RNA。这篇综述深入探讨了了解这些调控机制的最新进展,强调了它们在阐明软体动物贝壳生物矿化过程的功能和进化动态方面的重要意义。在这一错综复杂的协调过程中,具有不同功能域的分泌物组起着核心作用,它们有选择性地输出到外层空间,直接调节晶体生长和形态。转运体对于钙化过程中的底物运输和维持细胞平衡至关重要。除蛋白质和转运体外,非编码 RNA 分子也是影响贝壳生物矿化不可或缺的组成部分。本综述强调了这些遗传因子在分子水平上发挥的不可忽视的作用。为了理解软体动物生物矿化的复杂性,我们探讨了调控元件(主要是分泌组)的起源和进化历史。有些基因元件是最近才进化出来的,而有些则是古老的基因,它们被共同纳入了生物矿化工具包。这些元素通过快速进化的重复低复杂性结构域和结构域增益/丢失/重排,经历了结构和功能的进化,最终形成了一套独特的分泌组,其特点是既有保守的特征,又有进化创新。这篇全面的综述从分子和遗传学层面加深了我们对软体动物生物矿化的了解。
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引用次数: 0
Toward the validation of an alternative method for endocrine monitoring in sharks: insights from testosterone analyses in the skin of bycatch individuals. 鲨鱼内分泌监测替代方法的验证:副渔获物皮肤中睾酮分析的启示。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-17 DOI: 10.1111/1749-4877.12873
Annaïs Carbajal, Jana Hua-Monclús, Paula Serres-Corral, Isabel Lobató, Marta Muñoz-Baquero, Manel López-Béjar

The present study presents a new technique for measuring steroid hormones in shark skin. Results reveal for the first time that shark skin contains measurable levels of testosterone and that levels can be reliably measured by enzyme immunoassay. We identify the mass threshold below which samples should not be used to avoid inconsistent hormone data and highlight the importance of considering body location when designing future collection protocols.

本研究提出了一种测量鲨鱼皮肤中类固醇激素的新技术。研究结果首次揭示了鲨鱼皮肤中含有可测量的睾酮水平,并且可以通过酶免疫测定法可靠地测量睾酮水平。我们确定了质量阈值,低于该阈值的样本不应使用,以避免激素数据不一致,并强调了在设计未来采集方案时考虑身体位置的重要性。
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引用次数: 0
Potential mechanisms implied in tick infection by arboviruses and their transmission to vertebrate hosts. 蜱虫感染虫媒病毒并将其传播给脊椎动物宿主的潜在机制。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-17 DOI: 10.1111/1749-4877.12875
Chuanfei Yuan, Qiong Xu, Yunjia Ning, Qianfeng Xia

Ticks can transmit many pathogens, including arboviruses, to their vertebrate hosts. Arboviruses must overcome or evade defense mechanisms during their passage from the tick gut to the hemolymph, salivary glands, and the feeding site in the host skin. This review summarizes current knowledge of defense mechanisms in specific tick tissues and at the feeding site in the host skin. We discuss the possible roles of these defense mechanisms in viral infection and transmission. The responses of tick salivary proteins to arbovirus infection are also discussed. This review provides information that may help accelerate research on virus-tick interactions.

蜱虫可将包括虫媒病毒在内的多种病原体传播给脊椎动物宿主。虫媒病毒在从蜱肠道进入宿主皮肤的血淋巴、唾液腺和取食部位的过程中,必须克服或躲避防御机制。本综述总结了目前关于蜱虫特定组织和宿主皮肤取食部位的防御机制的知识。我们将讨论这些防御机制在病毒感染和传播中可能发挥的作用。此外还讨论了蜱唾液蛋白对虫媒病毒感染的反应。这篇综述提供的信息可能有助于加快病毒与蜱虫相互作用的研究。
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引用次数: 0
Anthropogenic forests simplify seed- but not pollen-dispersal networks. 人造森林简化了种子传播网络,但没有简化花粉传播网络。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-16 DOI: 10.1111/1749-4877.12868
Luis P DA Silva, António Pereira Coutinho, Jaime A Ramos, Ruben H Heleno

Natural native forests are rapidly being replaced by anthropogenic forests often with a strong presence of invasive alien plant species. Eucalypt species are widely planted worldwide, with Eucalyptus globulus plantations being particularly expressive in Portugal. Poor forestry practices often lead to the associated expansion of invasive species, such as Acacia dealbata. However, we still know relatively little about the functioning of anthropogenic forests, such as seed and pollen dispersal services. Here, we compared bird abundance and richness and the seed and pollen dispersal networks in both forest types. Anthropogenic forests presented lower bird abundance, and smaller, more simplified, and more random (abundance-based) seed dispersal services than those of natural forests. Interestingly, the pollen dispersal network was more similar than the seed dispersal network for both forest types and dominated by opportunistic and neutral processes, given the absence of specialized nectarivorous. The proportion of birds transporting seeds decreased, while those carrying pollen significantly increased in the anthropogenic forest compared to the native forest. Our work highlights the impact of anthropogenic forests on bird abundance, with consequences for seed dispersal services and forest regeneration.

自然原生林正迅速被人为森林所取代,外来入侵植物物种往往在其中大行其道。桉树物种在世界各地广泛种植,在葡萄牙,球叶桉种植园尤为突出。不良的林业实践往往会导致入侵物种(如金合欢)的扩大。然而,我们对人为森林的功能(如种子和花粉传播服务)仍然知之甚少。在这里,我们比较了两种森林中鸟类的丰度和丰富度以及种子和花粉传播网络。与天然林相比,人工林的鸟类丰度较低,种子传播服务更小、更简化、更随机(基于丰度)。有趣的是,与种子传播网络相比,两种森林类型的花粉传播网络更为相似,而且由于缺乏专门的食蜜鸟类,花粉传播网络以机会主义和中性过程为主。与原生林相比,人为森林中运输种子的鸟类比例下降,而携带花粉的鸟类比例显著上升。我们的研究强调了人为森林对鸟类数量的影响,以及对种子传播服务和森林再生的影响。
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引用次数: 0
Assessing the role of habitat, climate, and anthropization gradients on terrestrial mammal diversity in the western Mediterranean basin. 评估栖息地、气候和人类化梯度对西地中海盆地陆生哺乳动物多样性的影响。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-14 DOI: 10.1111/1749-4877.12866
Ignasi Fernández-Cabello, Marc Franch, Marc Vilella, Nerea Fernandez-Arrieta, Marc Rota, Ariadna Sanglas, Eric Baqué-Díaz, Marc Gallardet, Pau Federico, Albert Peris, Eric Serratosa, Joan Real, Ferran Sayol, Roger Puig-Gironès

Mammal species globally exhibit distribution patterns conditioned by environmental conditions and human impact. The Mediterranean basin provides an ideal system to study these effects due to its diverse climate, and habitat conditions. In this work, we aim to assess the impact of landscape heterogeneity and anthropization degree on terrestrial mammal diversity in this region. Accordingly, we deployed over 300 camera traps across 28 sites for 3 months. Detected mammal species (weighing more than 1kg) were classified as domestic carnivores, domestic ungulates, wild carnivores, wild ungulates, lagomorphs, and large rodents. Alpha and beta diversity were calculated for each group and all wild mammals. Simple linear regressions and multimodal analysis were conducted between mammal diversities and climate, environmental conditions, landscape heterogeneity, and anthropization degree variables. Redundancy analyses were performed to identify variables and species determining the mammalian community composition. Indexes measuring landscape heterogeneity, anthropization degree, and its 30-year change did not correlate with mammal diversity. However, the difference in elevation within sites and domestic carnivore abundance showed a significant positive correlation with some of the diversity indexes. Nonetheless, rainfall and mean elevation factors generally showed the highest correlation with mammal diversity. Instead, a few influential species, including generalists and open-habitat specialists, highlighted the importance of conserving open areas, as well as the importance of the Pyrenees region as a key habitat for certain species. Therefore, climatic variables emerged as the key determinants of mammal diversity, highlighting climate change as a potential threat to mammal diversity in this area.

全球哺乳动物的分布模式受环境条件和人类影响的制约。地中海盆地因其多样的气候和栖息地条件,为研究这些影响提供了一个理想的系统。在这项研究中,我们旨在评估景观异质性和人类化程度对该地区陆生哺乳动物多样性的影响。因此,我们在28个地点部署了300多个相机陷阱,历时3个月。探测到的哺乳动物物种(体重超过 1 千克)被分为家养食肉动物、家养有蹄类动物、野生食肉动物、野生有蹄类动物、袋鼬和大型啮齿类动物。计算了每个类群和所有野生哺乳动物的α和β多样性。在哺乳动物多样性与气候、环境条件、景观异质性和人类化程度变量之间进行了简单的线性回归和多模式分析。通过冗余分析,确定了决定哺乳动物群落组成的变量和物种。测量景观异质性、人类化程度及其 30 年变化的指标与哺乳动物多样性没有相关性。然而,地块内的海拔差异和家养食肉动物数量与一些多样性指数呈显著正相关。然而,降雨量和平均海拔因素通常与哺乳动物多样性的相关性最高。相反,一些有影响的物种,包括通食性和开阔栖息地专家,强调了保护开阔地区的重要性,以及比利牛斯地区作为某些物种主要栖息地的重要性。因此,气候变量成为哺乳动物多样性的主要决定因素,突出了气候变化对该地区哺乳动物多样性的潜在威胁。
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引用次数: 0
From buzz to brilliance: how bees shape social learning and cultural evolution 从嗡嗡声到辉煌:蜜蜂如何塑造社会学习和文化进化。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-12 DOI: 10.1111/1749-4877.12877
Hao WANG, Hao ZHENG
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引用次数: 0
Environmental conditions influence host-parasite interactions and host fitness in a migratory passerine. 环境条件影响迁徙鸟类宿主与寄生虫之间的相互作用以及宿主的适应性。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-08 DOI: 10.1111/1749-4877.12864
Enrique González-Bernardo, Gregorio Moreno-Rueda, Carlos Camacho, Jesús Martínez-Padilla, Jaime Potti, David Canal

The study of host-parasite co-evolution is a central topic in evolutionary ecology. However, research is still fragmented and the extent to which parasites influence host life history is debated. One reason for this incomplete picture is the frequent omission of environmental conditions in studies analyzing host-parasite dynamics, which may influence the exposure to or effects of parasitism. To contribute to elucidating the largely unresolved question of how environmental conditions are related to the prevalence and intensity of infestation and their impact on hosts, we took advantage of 25 years of monitoring of a breeding population of pied flycatchers, Ficedula hypoleuca, in a Mediterranean area of central Spain. We investigated the influence of temperature and precipitation during the nestling stage at a local scale on the intensity of blowfly (Protocalliphora azurea) parasitism during the nestling stage. In addition, we explored the mediating effect of extrinsic and intrinsic factors and blowfly parasitism on breeding success (production of fledglings) and offspring quality (nestling mass on day 13). The prevalence and intensity of blowfly parasitism were associated with different intrinsic (host breeding date, brood size) and extrinsic (breeding habitat, mean temperature) factors. Specifically, higher average temperatures during the nestling phase were associated with lower intensities of parasitism, which may be explained by changes in blowflies' activity or larval developmental success. In contrast, no relationship was found between the prevalence of parasitism and any of the environmental variables evaluated. Hosts that experienced high parasitism intensities in their broods produced more fledglings as temperature increased, suggesting that physiological responses to severe parasitism during nestling development might be enhanced in warmer conditions. The weight of fledglings was, however, unrelated to the interactive effect of parasitism intensity and environmental conditions. Overall, our results highlight the temperature dependence of parasite-host interactions and the importance of considering multiple fitness indicators and climate-mediated effects to understand their complex implications for avian fitness and population dynamics.

宿主与寄生虫共同进化的研究是进化生态学的一个核心课题。然而,目前的研究仍很零散,寄生虫对宿主生活史的影响程度还存在争议。造成这种不完整情况的一个原因是,在分析宿主-寄生虫动态的研究中经常忽略环境条件,而环境条件可能会影响寄生的暴露或效果。环境条件与寄生虫感染的发生率和强度及其对宿主的影响之间存在怎样的关系,这个问题在很大程度上尚未得到解决,为了帮助阐明这个问题,我们利用了对西班牙中部地中海地区的一个鶺鴒(Ficedula hypoleuca)繁殖种群长达25年的监测。我们在当地范围内调查了雏鸟期气温和降水对雏鸟期吹蝇(Protocalliphora azurea)寄生强度的影响。此外,我们还探究了外在和内在因素以及蝇类寄生对繁殖成功率(雏鸟产量)和后代质量(第13天的雏鸟质量)的中介作用。蝇类寄生的发生率和强度与不同的内在因素(寄主繁殖日期、雏鸟大小)和外在因素(繁殖生境、平均温度)有关。具体来说,雏鸟期平均气温越高,寄生强度越低,这可能是由于吹蝇的活动或幼虫发育成功率发生了变化。相比之下,寄生率与任何环境变量之间都没有关系。随着温度的升高,寄生虫寄生强度高的寄主雏鸟数量增加,这表明在较温暖的条件下,雏鸟发育过程中对严重寄生虫寄生的生理反应可能会增强。然而,雏鸟的体重与寄生强度和环境条件的交互作用无关。总之,我们的研究结果强调了寄生虫-宿主相互作用的温度依赖性,以及考虑多种适应性指标和气候介导效应的重要性,以了解它们对鸟类适应性和种群动态的复杂影响。
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引用次数: 0
Population and community ecology: past progress and future directions. 种群和群落生态学:过去的进展和未来的方向。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-07-02 DOI: 10.1111/1749-4877.12863
Charles J Krebs, Stan Boutin, Rudy Boonstra

Population and community ecology as a science are about 100 years old, and we discuss here our opinion of what approaches have progressed well and which point to possible future directions. The three major threads within population and community ecology are theoretical ecology, statistical tests and models, and experimental ecology. We suggest that our major objective is to understand what factors determine the distribution and abundance of organisms within populations and communities, and we evaluate these threads against this major objective. Theoretical ecology is elegant and compelling and has laid the groundwork for achieving our overall objectives with useful simple models. Statistics and statistical models have contributed informative methods to analyze quantitatively our understanding of distribution and abundance for future research. Population ecology is difficult to carry out in the field, even though we may have all the statistical methods and models needed to achieve results. Community ecology is growing rapidly with much description but less understanding of why changes occur. Biodiversity science cuts across all these subdivisions but rarely digs into the necessary population and community science that might solve conservation problems. Climate change affects all aspects of ecology but to assume that everything in population and community ecology is driven by climate change is oversimplified. We make recommendations on how to advance the field with advice for present and future generations of population and community ecologists.

种群与群落生态学作为一门科学已有约 100 年的历史,我们在此讨论我们对哪些方法进展顺利以及哪些方法指明了未来可能的方向的看法。种群和群落生态学的三大主线是理论生态学、统计检验和模型以及实验生态学。我们认为,我们的主要目标是了解哪些因素决定了种群和群落中生物的分布和丰度,我们将根据这一主要目标来评估这些方法。理论生态学优雅而令人信服,为我们通过有用的简单模型实现总体目标奠定了基础。统计学和统计模型提供了信息丰富的方法,可定量分析我们对分布和丰度的理解,为今后的研究提供参考。尽管我们可能拥有取得成果所需的所有统计方法和模型,但在实地开展种群生态学研究却很困难。群落生态学发展迅速,描述很多,但对发生变化的原因了解较少。生物多样性科学横跨所有这些细分领域,但很少深入研究可能解决保护问题的必要种群和群落科学。气候变化影响生态学的方方面面,但假设种群和群落生态学中的一切都由气候变化驱动则过于简单化。我们就如何推动该领域的发展提出了建议,并为当代和后代的种群与群落生态学家提供了建议。
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引用次数: 0
Uncovering the immune evasion mechanism of microbial pathogens: lessons from anti-encapsulation strategies adopted by a fungus 揭示微生物病原体的免疫逃避机制:从真菌采取的反包囊策略中汲取教训。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-06-28 DOI: 10.1111/1749-4877.12867
Jing WEI, Yuxin ZHANG, Letian XU

Overview of Hemocytin-Mediated Cellular Encapsulation and Melanization Responses in Insects Against Fungal Pathogens.

昆虫对真菌病原体的血细胞素介导的细胞包裹和黑色化反应概述
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引用次数: 0
Cutaneous shedding in amphibians causes shifts in bacterial microbiomes. 两栖动物的皮肤脱落会导致细菌微生物群的变化。
IF 3.5 1区 生物学 Q1 ZOOLOGY Pub Date : 2024-06-19 DOI: 10.1111/1749-4877.12858
Chava L Weitzman, Gregory P Brown, Karen Gibb, Keith Christian

Considerable research has focused on microbes on amphibian skin, as they act as the first line of defense against invading pathogens. This effort has generated substantial data on patterns across species, space, time, and ontogeny, alongside a growing list of beneficial antifungal symbionts. Though there is evidence of stability in amphibian skin microbial communities, there is also an indication that regular skin shedding reduces cultivable bacteria, with regrowth and recolonization in the period between sheds. This suggests that skin communities are in constant flux, and we lack an understanding of how the membership and structure of those communities are affected by shedding events. In this study, we conducted experiments on cane toads (Rhinella marina) to investigate the influence of shedding on skin microbiomes. We first used quantitative PCR to verify a positive correlation between bacterial loads and time in the days after shedding. We then resampled individuals over time to describe changes in community composition in the 38 h after shedding using amplicon sequencing. Similar to trends of bacterial loads, we found increases in alpha diversity over time after shedding, suggesting that shedding reduces bacterial diversity as it knocks down bacterial loads. During the 38-h period, community structure became similar to pre-shed communities in some individuals, but there was no consistent pattern in structural changes among individuals. In light of the amphibian chytridiomycosis pandemic, understanding how physiological events such as skin shedding affect beneficial bacteria and communities on amphibians would provide important insight into amphibian ecology.

大量研究集中于两栖动物皮肤上的微生物,因为它们是抵御病原体入侵的第一道防线。这项工作产生了大量关于不同物种、空间、时间和个体发育模式的数据,同时也产生了越来越多有益的抗真菌共生体。虽然有证据表明两栖动物皮肤微生物群落具有稳定性,但也有迹象表明,定期脱皮会减少可培养的细菌,而在脱皮间隔期,细菌会重新生长并重新定殖。这表明皮肤群落处于不断变化之中,而我们对这些群落的成员和结构如何受到脱落事件的影响还缺乏了解。在本研究中,我们对蔗蟾蜍(Rhinella marina)进行了实验,研究脱落对皮肤微生物群的影响。我们首先使用定量 PCR 验证了脱落后几天内细菌负荷与时间之间的正相关性。然后,我们随着时间的推移对个体重新取样,利用扩增子测序法描述脱落后 38 小时内群落组成的变化。与细菌负荷的趋势相似,我们发现脱落后随着时间的推移,α多样性也在增加,这表明脱落会降低细菌负荷,从而减少细菌多样性。在38小时期间,一些个体的群落结构变得与脱落前的群落相似,但不同个体之间的结构变化没有一致的模式。鉴于两栖动物糜烂性真菌病的流行,了解皮肤脱落等生理事件如何影响两栖动物身上的有益细菌和群落将对两栖动物生态学提供重要的启示。
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引用次数: 0
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Integrative zoology
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