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Marker-trait association analysis for grain shape traits in rice (Oryza sativa L.) 水稻粒形性状的标记-性状关联分析
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-12-12 DOI: 10.1163/22238980-bja10068
S. Sinha, Y. Kumar, Saurav Kumar, Mankesh Kumar, K. Rashmi, Sareeta Nahakpam, Satyendra Tomar, S. P. Singh
Marker-trait association study was undertaken to identify genomic regions linked to SSR markers with grain shape traits in rice. The association analysis identified 20 and 8 marker-trait association by GLM and MLM approaches, respectively at P values ≤ 0.005. GLM approach identified association for three traits on chromosome 1, 2, 4, 5, 6, 8, 9, 11 and 12 explaining 16.07% to 38.66% phenotypic variance whereas MLM approach detected association for four traits on chromosome 1, 4, 7, 8 and 11 explaining 15.51% to 27.24%. In GLM approach, the marker loci RM430_200 located on chromosome 5 showed highly significant association with test weight explained maximum phenotypic variance of 38.66%. While in MLM, marker RM320_250 located on chromosome 7 showed highly significant association with grain breadth accounted for 27.24% of phenotypic variance. The significant marker-trait association was lower in MLM compared to those in GLM. MLM method was proven to be useful in controlling false associations. The marker-trait association identified from the present study would be validated and utilized in marker assisted breeding programs of grain shape traits in rice.
采用标记-性状关联研究方法,对水稻粒形性状与SSR标记连锁的基因组区域进行了鉴定。关联分析通过GLM和MLM方法分别确定了20个和8个标记-性状关联,P值≤0.005。GLM方法确定了1、2、4、5、6、8、9、11和12号染色体上三个性状的相关性,解释了16.07%至38.66%的表型变异,而MLM方法检测了1、4、7、8和11号染色体上四个性状的关联,解释了15.51%至27.24%,位于5号染色体上的标记RM430_200与试验重呈高度显著相关,解释了38.66%的最大表型变异,而位于7号染色体的标记RM320_250与粒宽呈高度显著相关性,解释了27.24%的表型变异。与GLM相比,MLM的显著标记-性状关联性较低。传销方法被证明在控制虚假关联方面是有用的。本研究确定的标记-性状关联将在水稻粒形性状的标记辅助育种计划中得到验证和利用。
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引用次数: 0
Seed priming using Moringa oleifera leaf decoction increases BPT 5204 rice yield 辣木叶煎液灌种可提高BPT 5204水稻产量
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-12-07 DOI: 10.1163/22238980-bja10069
Varun Kusampudi, Shilpa Kusampudi, Lakshmi B.S.
The present study screened different concentrations of Moringa oleifera (M. oleifera) leaf decoction (M. oleifera hot water extract-MWE) (100, 10, 1, and 0.1 g/L) to investigate their potential in increasing the yield of BPT 5204 rice variety. We aimed to analyze the effect of MWE on rice yield with different modes of treatment such as seed soaking, root treatment, and foliar spray. Rice seeds were soaked at different concentrations of MWE for 24 h before seeding. Plants grown from rice seeds soaked in 100 g/L MWE produced 6.6 tons/ha yield, whereas, roots of rice seedlings soaked for 4 h in varied MWE concentrations before transplantation and plants treated with 100 g/L MWE produced an yield of 6 tons/ha. In the last group, 45 day old rice plants were subjected to foliar spray with varying concentrations of MWE, where the foliar spray of rice plants with 100 g/L MWE showed a 6.5 tons/ha yield. As plants grown from rice seeds soaked in 100 g/L MWE produced a high yield, the leaves from these plants were analyzed to study the effect of MWE treatment on phenylalanine lyase and hydrogen peroxide (H2O2) and nitric oxide levels and genes involved in rice yield. The leaves of plants grown from rice seeds soaked in 100 g/L MWE showed increased H2O2 and SAM2 gene levels compared to control plants. This study reports the potential role of MWE as an environmentally safe, cost-effective and easy-to-use biostimulant for enhancing yield of rice.
本研究筛选了不同浓度的辣木叶煎液(辣木热水提取物MWE)(100、10、1和0.1 g/L),以研究其在提高BPT5204水稻品种产量方面的潜力。我们旨在分析MWE在浸种、根系处理和叶面喷雾等不同处理方式下对水稻产量的影响。将水稻种子在不同浓度的MWE中浸泡24小时 播种前h。用浸泡在100中的水稻种子种植的植物 g/L MWE可产生6.6吨/公顷的产量,而浸泡4 在移植前和用100 g/L MWE的产量为6吨/公顷。在最后一组中,对45天龄的水稻植株进行不同浓度MWE的叶面喷雾,其中100 g/L MWE显示出6.5吨/公顷的产量。用浸泡在100 对这些植物的叶片进行了分析,研究了MWE处理对苯丙氨酸裂解酶、过氧化氢(H2O2)和一氧化氮水平以及与水稻产量有关的基因的影响。浸泡在100 g/L MWE显示与对照植物相比H2O2和SAM2基因水平增加。本研究报告了MWE作为一种环境安全、成本效益高且易于使用的生物刺激剂在提高水稻产量方面的潜在作用。
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引用次数: 0
An updated checklist of seaweeds and seagrasses from the Syrian Mediterranean Sea coast 更新的叙利亚地中海沿岸的海藻和海草清单
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-08-08 DOI: 10.1163/22238980-bja10066
R. Einav, Á. Israel
In the last two decades, major taxonomic modifications have taken place on marine macroalgae with important changes at the genera level and discovery of cryptic species worldwide. These updates have an important role by serving as a baseline for future ecological interpretations related to on-going climate changes in the marine environment. Hence, this study aimed to elaborate a comprehensive and revised checklist of seaweeds and seagrasses reported in the literature over the years for Syrian Mediterranean Sea shorelines. It was found that the marine flora is quite diverse with a recounted total of 290 species of which 52 are Chlorophyta, 178 Rhodophyta and 60 Ochrophyta (Phaeophyceae). The Syrian shores also host five marine angiosperms (seagrasses), even though Zostera marinaLinnaeus has been unaccounted for in recent years. This study will further contribute to a better understanding of seaweed distribution within the Levant basin.
近二十年来,海洋大型藻类的分类发生了重大变化,属水平发生了重大变化,并发现了世界范围内的隐种。这些更新具有重要作用,可以作为未来与海洋环境中持续气候变化有关的生态解释的基线。因此,本研究旨在为叙利亚地中海沿岸多年来文献中报道的海藻和海草制定一份全面和修订的清单。结果表明,该海域植物区系十分丰富,共有290种,其中绿藻类52种,红藻类178种,绿藻类60种。叙利亚海岸还生长着五种海洋被子植物(海草),尽管近年来已经找不到Zostera marininnaeus的踪影。这项研究将进一步有助于更好地了解黎凡特盆地内的海藻分布。
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引用次数: 1
Potential uses of some Araceae species in Vietnam 一些天南星科植物在越南的潜在用途
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-06-29 DOI: 10.1163/22238980-bja10065
H. Van
Vietnam is one of the diverse regions for Araceae and possesses a large number of endemic Araceae species. Many Araceae species in Vietnam have been used as food and traditional medicines. Accordingly, species belonging to the genera, including Amorphohallus, Aglaonema, Arisaema, Alocasia, Colocasia, Homalomena, Lasia and Typhonium possessed many potential applications. Based on my knowledge and observations as well as the literatures on values of Araceae species, the present review aims to provide the information regarding the potential uses in medicine, food and ornamental plant industry of 27 Araceae species in Vietnam. In addition, the illustrative photos of all 27 Araceae species from this study are also given.
越南是天南星科植物的多样性地区之一,拥有大量的天南星科特有物种。越南许多天南星科植物被用作食品和传统药物。因此,Amorphohallus属、Aglaonema属、Arisaema属、Alocasia属、Colocasia属、Homalomena属、Lasia属和Typhonium属具有很大的应用潜力。本文根据本人对天南星科植物的了解和观察,结合文献资料,对越南27种天南星科植物在医药、食品和观赏植物等方面的潜在应用进行综述。此外,本文还给出了天南星科27种植物的图解图。
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引用次数: 0
Role of heterosis for photosynthetic traits and sink organs in seed yield enhancement in safflower 红花光合性状和汇器官杂种优势在种子增产中的作用
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-06-27 DOI: 10.1163/22238980-bja10064
K. Anjani, R. Pasala, S. N. Sudhakara Babu
Genetic basis of heterosis has been exploited for yield improvement in safflower (Carthamus tinctorius L.) but little is known about physiological basis of heterosis for yield. The objective of this study was to quantify the physiological basis of heterosis for seed yield in safflower by examining 19 safflower hybrids and their parents for photosynthetic traits, and yield and its components. The results showed that heterosis for yield and its components was high and positive but was low and negative for photosynthetic traits in most of the hybrids studied. There were weak and non-significant relations between photosynthetic traits and yield and its components. Hybrids were more efficient in translocating photoassimilates to two major sink organs viz., number of seeds and number of capitula despite having low net photosynthesis than parents. Seed yield increase in safflower is more sink-than source-limited and was necessary through heterosis for sink organs. Heterosis breeding for larger sink size with parallel increase in effectiveness of sink organs in translocation of photo-assimilates is suggested for yield improvement in safflower.
红花(Carthamus tinctorius L.)利用杂种优势的遗传基础来提高产量,但对杂种优势的生理基础知之甚少。本研究的目的是通过检测19个红花杂交种及其亲本的光合特性、产量及其组成,量化红花种子产量杂种优势的生理基础。结果表明,大多数杂交种产量及其组成部分的杂种优势较高且为正,而光合性状的杂种优势较低且为负。光合特性与产量及其组成成分之间存在微弱和不显著的关系。杂交种在将光同化物转移到两个主要的库器官(即种子数量和头状体数量)方面更有效,尽管其净光合作用比亲本低。红花种子产量的增加更多的是库而非源限制,这是通过库器官的杂种优势所必需的。为了提高红花的产量,建议进行更大库大小的杂种优势育种,同时提高库器官在光同化物转运中的有效性。
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引用次数: 0
Genetic diversity of ber (Ziziphus mauritiana L.) cultivars using physico-chemical characteristics 利用物化特性分析毛里亚紫枣(Ziziphus mauritiana L.)品种遗传多样性
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-06-03 DOI: 10.1163/22238980-bja10059
Utpal Das, Ahok Hugar, Shantanu Das, S. Das, A. Kurubar
The present experiment was conducted to estimate the physico-chemical diversity of twelve Indian jujube cultivars. A sum of fifteen quantitative characters were explored and subjected to multivariate analyses. Significant variability was observed across the ber cultivars under study. Pearson’s correlation analysis identified days to first flower initiation, a higher number of flowers per cluster and a higher number of retained fruits per cluster which could be used as the basis of selection for identification of high yielding ber cultivars. The principal component analysis (PCA) estimates 60.2% of the total variability in ber cultivars is contributed by PC1 and PC2. The scatter plot of the first two components highlights the number of retained fruits per cluster, yield per tree, pulp weight, fruit width, stone weight and number of flowers per cluster as principal characters that played a significant role in the total variability. Further, PCA also helped to identify Mehrun, Manuki and Chhuhara as superior ber cultivars which performed well with respect to the PC1 and PC2. The Mahalanobis D2 statistics grouped all the twelve ber cultivars into five clusters indicating the existence of ample genetic diversity among the cultivars. Considering the inter-cluster distance along with cluster mean it could be concluded that the cultivars of cluster II and Cluster III may be utilized to estimate the combining ability for effective exploitation of heterosis or to isolate desirable transgressive segregants.
本试验对12个印度大枣品种的理化多样性进行了评价。对总共15个数量性状进行了探索,并进行了多变量分析。在所研究的ber品种中观察到显著的变异性。Pearson的相关分析确定了第一次开花的天数、每个簇的花数和每个簇的保留果实数,这可以作为鉴定高产ber品种的选择基础。主成分分析(PCA)估计,PC1和PC2对ber品种总变异性的贡献率为60.2%。前两个组成部分的散点图突出了每簇保留果实的数量、每棵树的产量、果肉重量、果实宽度、核重和每簇花的数量,它们是对总变异性起重要作用的主要特征。此外,主成分分析也有助于确定Mehrun、Manuki和Chhuhara是相对于PC1和PC2表现良好的优良ber品种。Mahalanobis D2统计数据将所有12个ber品种分为5个聚类,表明这些品种之间存在充足的遗传多样性。考虑到簇间距离和簇平均值,可以得出结论,簇II和簇III的品种可以用来估计有效利用杂种优势的配合力或分离出理想的海侵分体。
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引用次数: 0
Study on storage techniques and temperature conditions for sporocarp germination and development in azolla 杜鹃花孢子皮萌发与发育的贮藏技术与温度条件研究
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-06-01 DOI: 10.1163/22238980-bja10063
A. Jha, R. Padbhushan, Arun Kumar
Azolla is a small freshwater fern reproduces sexually and asexually (by splitting). The spores’ formation through sexual reproduction in the azolla species is influenced by climatic condition. Keeping this fact in view, the present study was conducted with an aim to study the impact of temperature on the sporocarp formation and also developing storage techniques for sexual propagation in the azolla species. The study showed that the sporulation in Azolla pinnata was more sensitive to increase in the temperature than Azolla microphylla. Azolla pinnata did not sporulate on rising maximum temperature; however sporulation in Azolla microphylla was delayed by one month due to rise in the temperature during second year compared to the first year. Conversion of the freshly collected sporocarps into Azolla microphylla plants were decreased by 4.2–9.3% on increasing minimum and maximum temperatures by 5°C and 8°C, respectively and conversion of the one month old sporocarps into plants was decreased by 1.8–8.7% on rising minimum and maximum temperatures. On storing sporocarps in the refrigerator resulted in higher germination percentage than stored at room temperature. Conversion of freshly collected sporocarps into Azolla plants increased on storage of the sporocarps mixing with soil (1:15) in the refrigerator than at room temperature. Germination of one month old Azolla microphylla sporocarps on storage in refrigerator after mixing with soil decreased during second year compared to first year. Therefore, in a controlled environment, azolla may be encouraged to grow sporocarps for exploiting full potential of azolla for eco-friendly agricultural and livestock management.
Azolla是一种小型淡水蕨类植物,有性繁殖和无性繁殖(通过分裂)。唑菌有性繁殖孢子的形成受气候条件的影响。考虑到这一事实,本研究旨在研究温度对子孢子形成的影响,并开发唑类有性繁殖的储存技术。研究表明,羽状亚速藻的产孢对温度的升高比小叶亚速藻更敏感。最高温度升高时,羽状亚速藻不产孢;然而,由于第二年的温度比第一年升高,小叶亚速木的孢子形成延迟了一个月。当最低和最高温度分别升高5°C和8°C时,新鲜采集的孢子果转化为小叶紫苏植物的转化率分别降低了4.2-9.3%,而当最低和最高温升高时,一个月大的孢子果的转化率降低了1.8-8.7%。在冰箱中储存孢子果比在室温下储存的孢子果发芽率更高。与室温下相比,在冰箱中储存与土壤(1:15)混合的孢子果时,新收集的孢子果转化为亚速拉植物的几率增加。与第一年相比,一个月大的小叶Azolla孢子果与土壤混合后在冰箱中储存的第二年发芽率下降。因此,在受控的环境中,可以鼓励唑菌种植孢子果,以充分利用唑菌在生态友好农业和畜牧业管理方面的潜力。
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引用次数: 0
In vitro study of virus new strain JLCuGV infected nodal explants and production of planting material through meristem culture from virus-infected Jatropha curcas plants 病毒新菌株JLCuGV感染麻疯树节外植体的体外研究及分生组织培养生产种植材料
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-06-01 DOI: 10.1163/22238980-bja10062
Aneesha Singh
Jatropha curcas is an important biodiesel plant as its seed contains 27–40% oil. The virus infection causes adverse effects on plant growth, and yield. The present study was carried out to develop plantlets from virus-infected plants using meristematic cultures. Cultures were also raised using nodal explant to figure out culture loss caused by the new strain of Jatropha leaf curl Gujarat virus (JLCuGV). Poor (48.3 ± 15.1 %) shoot bud induction was noted in virus-infected explants on MS medium supplemented with 6-benzylaminopurine (BAP) and Indole-3-acetic acid (IAA). Severe culture loss was noted upon subsequent sub-cultures of nodal explants. Apical meristem (MC) developed the highest (86.3 ± 12.5 %) shoot bud induction on Murashige and Skoog (MS) medium supplemented with 0.5 mg/L Thidiazuron (TDZ). Best results in shoot proliferation and elongation were achieved on 1.0 mg/L BAP, 1.5 mg/L IAA and 0.5 mg/L Gibberellic acid (GA3) containing medium with 9.9 ± 1.7 number of shoot buds of 5.2 ± 0.5 cm shoot length. It was interesting to note that the rooting percentage was not affected by virus infection. Shoots obtained from virus-infected and meristem cultures rooted well without any significant difference in rooting percentage. It was known by the study that the generation of planting material from virus-infected plants was possible with meristem explants but recalcitrant with nodal explants.
麻疯树是一种重要的生物柴油植物,其种子含油量为27-40%。病毒感染对植物生长和产量产生不利影响。本研究是利用分生组织培养从病毒感染的植物中培养植株。利用结节外植体培养,研究了新毒株麻疯树卷曲古吉拉特病毒(JLCuGV)造成的培养损失。在添加6-苄基氨基嘌呤(BAP)和吲哚-3-乙酸(IAA)的MS培养基上,病毒感染的外植体的芽诱导率(48.3±15.1%)较差。在节形外植体的继代培养中发现了严重的培养损失。在添加0.5 mg/L噻地唑龙(TDZ)的Murashige和Skoog (MS)培养基上,顶端分生组织(MC)的芽诱导率最高(86.3±12.5%)。在含1.0 mg/L BAP、1.5 mg/L IAA和0.5 mg/L赤霉素(GA3)的培养基中,芽数为9.9±1.7个,芽长为5.2±0.5 cm时,芽的增殖和伸长效果最好。有趣的是,生根率不受病毒感染的影响。病毒感染和分生组织培养的芽生根良好,生根率无显著差异。研究结果表明,用分生组织外植体可以从受病毒感染的植物中产生种植材料,但用节段外植体则难以产生。
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引用次数: 0
Modulation of physiological responses and tolerance of Alternanthera tenella Colla (Amaranthaceae) to cadmium during in vitro cultivation 紫花苋(amaranaceae)对镉的生理反应和耐受性调控
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-05-30 DOI: 10.1163/22238980-bja10060
E. Clairvil, J. Martins, P. Braga, R. Cipriano, L. T. Conde, S. W. Moreira, Franciele Pereira Rossini, A. R. Falqueto, A. Gontijo
The use of plants that present clear physiological responses to heavy metals such as cadmium (Cd) can assist in environmental monitoring. The aim was to evaluate physiological responses of Cd in Alternanthera tenella plants in micro-controlled conditions and to assess the its tolerance level and bioindicator potential. Nodal segments of A. tenella were grown in flasks containing semi-solid MS medium supplemented with (0, 50, 100, and 150 μM Cd). The total fresh and dry weight of the plants, in addition to physiological analyses, were determined after 30 days of cultivation. Plants submitted to Cd showed a reduction in biomass and photosynthetic pigments content. The decline in the Chl a/b ratio indicated the deleterious effects of Cd, as evidenced by the decrease in the density of active reaction centers (RC/CSM). The levels of deterioration in the functionality or structural integrity of the thylakoid membranes (WL) and the activity of the oxygen evolution complex (WK) increased as a function of Cd concentrations. The decreases in photochemical and non-photochemical quenching (qP and qN, respectively) observed in plants exposed to Cd indicated photochemical dysfunctions. Additionally, the increase in the quantum yield of non-regulated energy dissipation (ΦNO) indicated the presence of photodamage. Plants had a low/intermediate TI level (≥21.7) in the analyzed concentration range. A. tenella plants can bioaccumulate high amounts of Cd. The level of physiological responses of A. tenella is dependent on the concentration of Cd, which makes the use of this species even more promising as a bioindicator for this metal.
利用对重金属(如镉)有明确生理反应的植物有助于环境监测。目的是评价微控制条件下柔嫩交替花植株对Cd的生理反应,评价其耐Cd水平和生物指标潜力。在含有添加(0、50、100和150 μM Cd)的半固体MS培养基的烧瓶中培养柔顺芽孢杆菌的节段。培养30天后测定植株的总鲜重和总干重,并进行生理分析。Cd处理的植株生物量和光合色素含量下降。Chl a/b比值的下降表明Cd的有害作用,活性反应中心(RC/CSM)密度的下降证明了这一点。类囊体膜(WL)功能或结构完整性的退化程度以及析氧复合物(WK)的活性随Cd浓度的增加而增加。Cd胁迫下植物光化学猝灭和非光化学猝灭(qP和qN)的减少表明光化学功能失调。此外,非调节能量耗散量子产率的增加(ΦNO)表明存在光损伤。在分析的浓度范围内,植物TI含量为中低水平(≥21.7)。tenella植物可以生物积累大量的Cd。tenella的生理反应水平取决于Cd的浓度,这使得该物种更有希望作为这种金属的生物指示物。
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引用次数: 1
Altitudinal variation in flower color and attraction pattern of Rhododendron arboreum Sm. in central Himalayan Region of Uttarakhand, India 印度北阿坎德邦喜马拉雅山脉中部杜鹃花花色和吸引模式的海拔变化
IF 1 4区 生物学 Q4 PLANT SCIENCES Pub Date : 2022-05-27 DOI: 10.1163/22238980-bja10061
Akshay Mamgain
This study highlights the importance of flower color variation and attraction as a mechanism for pollination and protection of floral parts. As part of this study, a survey relating to flower color variation and differences in spotting pattern (nectar guides) was conducted on Rhododendron arboreum, a widespread tree species in the mountainous region of Uttarakhand state, at 43 different altitudinal locations. Seven original color morphs of flowers and five types of spot variation in the nectar guide were observed. The study underlines the role of flower color polymorphism in both pollination and adaptation to varied environmental conditions. Further, the significance of nectar guides in directing the visitor to the reward is discussed. This study has the potential to enhance existing knowledge about flower color variation and attraction to the environment.
本研究强调了花的颜色变化和吸引作为传粉和保护花体的机制的重要性。作为本研究的一部分,对北阿坎德邦(Uttarakhand)山区广泛分布的树种杜鹃花(Rhododendron arboreum)在43个不同的海拔位置进行了颜色变化和斑点模式(花蜜指南)差异的调查。观察了花的7种原始颜色变化和花蜜指南中的5种斑点变化。该研究强调了花色多态性在传粉和适应不同环境条件中的作用。此外,还讨论了花蜜向导在引导来访者获得奖励方面的意义。这项研究有可能增强现有的关于花的颜色变化和对环境的吸引力的知识。
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引用次数: 0
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Israel Journal of Plant Sciences
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