首页 > 最新文献

Journal of Animal Science and Technology最新文献

英文 中文
Development of nutrigenomic based precision management model for Hanwoo steers. 基于营养基因组学的韩宇舵机精细化管理模型的开发。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-05-01 DOI: 10.5187/jast.2023.e38
Chandima Gajaweera, Dong Hun Kang, Doo Ho Lee, Yeong-Kuk Kim, Bo Hye Park, Sun Sik Chang, Ui Hyung Kim, Seung Hwan Lee, Ki Yong Chung

Focusing high marble deposition, Hanwoo feedlot system uses high-energy diet over the prolonged fattening period. However, due to the individual genetic variation, around 40% of them are graded into inferior quality grades (QG), despite they utilized the same resources. Therefore, focusing on development of a nutrigenomic based precision management model, this study was to evaluated the response to the divergent selection on genetic merit for marbling score (MS), under different dietary total digestible nutrient (TDN) levels. Total of 111 calves were genotyped and initially grouped according to estimated breeding value (high and low) for marbling score (MS-EBV). Subsequently, managed under two levels of feed TDN%, over the calf period, early, middle, and final fattening periods following 2 × 2 factorial arrangement. Carcasses were evaluated for MS, Back fat thickness (BFT) and Korean beef quality grading standard. As the direct response to the selection was significant, the results confirmed the importance of initial genetic grouping of Hanwoo steers for MS-EBV. However, dietary TDN level did not show an effect (p > 0.05) on the MS. Furthermore, no genetic-by-nutrition interaction for MS (p > 0.05) was also observed. The present results showed no correlation response on BFT (p > 0.05), which indicates that the selection based on MS-EBV can be used to enhance the MS without undesirable effect on BFT. Ultimate turnover of the Hanwoo feedlot operation is primarily determined by the QGs. The present model shows that the initial grouping for MS-EBV increased the proportion of carcasses graded for higher QGs (QG1++ and QG1+) by approximately 20%. Moreover, there appear to be a potential to increase the proportion of QG 1++ animals among the high-genetic group by further increasing the dietary energy content. Overall, this precision management strategy suggests the importance of adopting an MS based initial genetic grouping system for Hanwoo steers with a subsequent divergent management based on dietary energy level.

针对高大理石沉积,韩宇饲养场系统在长时间育肥期间使用高能量饲料。然而,由于个体遗传差异,尽管它们利用了相同的资源,但其中约40%被评为劣质等级(QG)。因此,本研究旨在建立一种基于营养基因组学的精确管理模型,以评估不同饲粮总可消化养分(TDN)水平下大理石纹评分(MS)遗传优势分化选择的响应。对111头犊牛进行基因分型,并根据大理石纹评分(MS-EBV)的估计育种值(高、低)进行初步分组。随后,按照2 × 2因子安排,在犊牛期、早期、中期和最终育肥期按两种饲料TDN%水平进行管理。采用MS、背膘厚(BFT)和韩牛肉质量分级标准对胴体进行评价。由于对选择的直接反应显著,结果证实了韩牛对MS-EBV的初始遗传分组的重要性。饲粮TDN水平对MS无显著影响(p > 0.05),且不存在遗传-营养互作作用(p > 0.05)。结果表明,基于MS- ebv的选择可以在不影响BFT的情况下提高MS。韩宇饲养场运营的最终营业额主要由qg决定。该模型显示,MS-EBV的初始分组使高QGs (QG1++和QG1+)的胴体比例增加了约20%。此外,进一步提高饲粮能量含量有可能提高qg1 ++在高遗传组中的比例。总的来说,这种精确管理策略表明,采用基于MS的初始遗传分组系统对韩宇阉牛具有重要意义,随后根据日粮能量水平进行分散管理。
{"title":"Development of nutrigenomic based precision management model for Hanwoo steers.","authors":"Chandima Gajaweera,&nbsp;Dong Hun Kang,&nbsp;Doo Ho Lee,&nbsp;Yeong-Kuk Kim,&nbsp;Bo Hye Park,&nbsp;Sun Sik Chang,&nbsp;Ui Hyung Kim,&nbsp;Seung Hwan Lee,&nbsp;Ki Yong Chung","doi":"10.5187/jast.2023.e38","DOIUrl":"https://doi.org/10.5187/jast.2023.e38","url":null,"abstract":"<p><p>Focusing high marble deposition, Hanwoo feedlot system uses high-energy diet over the prolonged fattening period. However, due to the individual genetic variation, around 40% of them are graded into inferior quality grades (QG), despite they utilized the same resources. Therefore, focusing on development of a nutrigenomic based precision management model, this study was to evaluated the response to the divergent selection on genetic merit for marbling score (MS), under different dietary total digestible nutrient (TDN) levels. Total of 111 calves were genotyped and initially grouped according to estimated breeding value (high and low) for marbling score (MS-EBV). Subsequently, managed under two levels of feed TDN%, over the calf period, early, middle, and final fattening periods following 2 × 2 factorial arrangement. Carcasses were evaluated for MS, Back fat thickness (BFT) and Korean beef quality grading standard. As the direct response to the selection was significant, the results confirmed the importance of initial genetic grouping of Hanwoo steers for MS-EBV. However, dietary TDN level did not show an effect (<i>p</i> > 0.05) on the MS. Furthermore, no genetic-by-nutrition interaction for MS (<i>p</i> > 0.05) was also observed. The present results showed no correlation response on BFT (<i>p</i> > 0.05), which indicates that the selection based on MS-EBV can be used to enhance the MS without undesirable effect on BFT. Ultimate turnover of the Hanwoo feedlot operation is primarily determined by the QGs. The present model shows that the initial grouping for MS-EBV increased the proportion of carcasses graded for higher QGs (QG1<sup>++</sup> and QG1<sup>+</sup>) by approximately 20%. Moreover, there appear to be a potential to increase the proportion of QG 1<sup>++</sup> animals among the high-genetic group by further increasing the dietary energy content. Overall, this precision management strategy suggests the importance of adopting an MS based initial genetic grouping system for Hanwoo steers with a subsequent divergent management based on dietary energy level.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 3","pages":"596-610"},"PeriodicalIF":2.3,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/89/3c/jast-65-3-596.PMC10271920.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9715791","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Estimating vegetation index for outdoor free-range pig production using YOLO. 利用YOLO估算室外散养生猪生产的植被指数。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-05-01 DOI: 10.5187/jast.2023.e41
Sang-Hyon Oh, Hee-Mun Park, Jin-Hyun Park

The objective of this study was to quantitatively estimate the level of grazing area damage in outdoor free-range pig production using a Unmanned Aerial Vehicles (UAV) with an RGB image sensor. Ten corn field images were captured by a UAV over approximately two weeks, during which gestating sows were allowed to graze freely on the corn field measuring 100 × 50 m2. The images were corrected to a bird's-eye view, and then divided into 32 segments and sequentially inputted into the YOLOv4 detector to detect the corn images according to their condition. The 43 raw training images selected randomly out of 320 segmented images were flipped to create 86 images, and then these images were further augmented by rotating them in 5-degree increments to create a total of 6,192 images. The increased 6,192 images are further augmented by applying three random color transformations to each image, resulting in 24,768 datasets. The occupancy rate of corn in the field was estimated efficiently using You Only Look Once (YOLO). As of the first day of observation (day 2), it was evident that almost all the corn had disappeared by the ninth day. When grazing 20 sows in a 50 × 100 m2 cornfield (250 m2/sow), it appears that the animals should be rotated to other grazing areas to protect the cover crop after at least five days. In agricultural technology, most of the research using machine and deep learning is related to the detection of fruits and pests, and research on other application fields is needed. In addition, large-scale image data collected by experts in the field are required as training data to apply deep learning. If the data required for deep learning is insufficient, a large number of data augmentation is required.

本研究的目的是利用带有RGB图像传感器的无人机(UAV)定量估计户外散养猪生产中放牧区域的损害水平。在大约两周的时间里,无人机捕获了10张玉米田图像,在此期间,允许妊娠母猪在100 × 50 m2的玉米田上自由放牧。将图像校正为鸟瞰图,然后分成32个片段,依次输入到YOLOv4探测器中,根据玉米图像的状态进行检测。从320张分割图像中随机选择43张原始训练图像,翻转生成86张图像,然后以5度增量旋转这些图像,进一步增强这些图像,共生成6192张图像。通过对每张图像应用三次随机颜色变换,进一步增强了增加的6192张图像,从而产生24,768个数据集。利用You Only Look Once (YOLO)方法对玉米在田间的占用率进行了有效估算。在观察的第一天(第2天),很明显,到第9天,几乎所有的玉米都消失了。在50 × 100 m2的玉米地(250 m2/头)放牧20头母猪时,至少5天后应将这些母猪轮换到其他放牧区以保护覆盖作物。在农业技术中,使用机器和深度学习的研究大多与水果和害虫的检测有关,还需要对其他应用领域进行研究。此外,需要该领域专家收集的大规模图像数据作为应用深度学习的训练数据。如果深度学习所需的数据不足,则需要进行大量的数据扩充。
{"title":"Estimating vegetation index for outdoor free-range pig production using YOLO.","authors":"Sang-Hyon Oh,&nbsp;Hee-Mun Park,&nbsp;Jin-Hyun Park","doi":"10.5187/jast.2023.e41","DOIUrl":"https://doi.org/10.5187/jast.2023.e41","url":null,"abstract":"<p><p>The objective of this study was to quantitatively estimate the level of grazing area damage in outdoor free-range pig production using a Unmanned Aerial Vehicles (UAV) with an RGB image sensor. Ten corn field images were captured by a UAV over approximately two weeks, during which gestating sows were allowed to graze freely on the corn field measuring 100 × 50 m<sup>2</sup>. The images were corrected to a bird's-eye view, and then divided into 32 segments and sequentially inputted into the YOLOv4 detector to detect the corn images according to their condition. The 43 raw training images selected randomly out of 320 segmented images were flipped to create 86 images, and then these images were further augmented by rotating them in 5-degree increments to create a total of 6,192 images. The increased 6,192 images are further augmented by applying three random color transformations to each image, resulting in 24,768 datasets. The occupancy rate of corn in the field was estimated efficiently using You Only Look Once (YOLO). As of the first day of observation (day 2), it was evident that almost all the corn had disappeared by the ninth day. When grazing 20 sows in a 50 × 100 m<sup>2</sup> cornfield (250 m<sup>2</sup>/sow), it appears that the animals should be rotated to other grazing areas to protect the cover crop after at least five days. In agricultural technology, most of the research using machine and deep learning is related to the detection of fruits and pests, and research on other application fields is needed. In addition, large-scale image data collected by experts in the field are required as training data to apply deep learning. If the data required for deep learning is insufficient, a large number of data augmentation is required.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 3","pages":"638-651"},"PeriodicalIF":2.3,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/10/63/jast-65-3-638.PMC10271927.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9715792","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Measuring the effects of estrus on rumen temperature and environment, behavior and physiological attributes in Korean Native breeding cattle. 测定发情期对韩国地方种牛瘤胃温度、环境、行为和生理特性的影响。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-05-01 DOI: 10.5187/jast.2022.e117
Jae-Young Kim, Jae-Sung Lee, Yong-Ho Jo, Hong-Gu Lee

In this study, rumen temperature and environment in estral and non-estral Korean Native breeding cattle were evaluated by using a bolus sensor. Behavioral and physiological changes in study animals were also assessed. To assess the rumen temperature and environment, we inserted bolus sensors into 12 Korean Native cattle with an average age of 35.5 months, then measured temperature and activity within the rumen using the wireless bolus sensor. Drinking, feeding and mounting behavior, and measured vaginal temperature and levels of intravaginal mucus resistance were recorded. We found that cattle in estrus exhibited more acts of mounting (37.4 vs. 0 times/day), increased vaginal temperature (39.0°C vs. 38.4°C), and decreased vaginal mucus resistance (136.3 Ω vs 197.4 Ω), compared with non-estral animals. Furthermore, increased levels of rumen activity were most significant in estrus cattle at the highest activity levels (p < 0.01). Overall, the estrus group exhibited increased rumen temperature (p = 0.01), compared with the non-estrus group. In conclusion, the results of this study not only provide basic physiological data related to estrus in improved Korean Native breeding cattle, but also suggest that monitoring of rumen temperature and activity might be used as an effective smart device for estrus detection.

本研究采用丸式传感器对韩国地方种牛的发情和非发情的瘤胃温度和环境进行了测定。对实验动物的行为和生理变化也进行了评估。为了评估瘤胃温度和环境,我们在12头平均年龄为35.5月龄的韩国本土牛体内插入了微丸传感器,然后使用无线微丸传感器测量了瘤胃内的温度和活动。记录小鼠的饮水、喂养和坐骑行为,并测量阴道温度和阴道内黏液抵抗水平。我们发现,与非发情动物相比,发情牛表现出更多的骑畜行为(37.4次/天vs 0次/天),阴道温度升高(39.0°C vs 38.4°C),阴道粘液阻力降低(136.3 Ω vs 197.4 Ω)。发情牛瘤胃活性最高时,瘤胃活性水平的提高最为显著(p < 0.01)。总体而言,发情组瘤胃温度高于非发情组(p = 0.01)。综上所述,本研究结果不仅为韩国改良地方种牛提供了与发情相关的基本生理数据,而且为监测瘤胃温度和活动提供了一种有效的发情智能检测设备。
{"title":"Measuring the effects of estrus on rumen temperature and environment, behavior and physiological attributes in Korean Native breeding cattle.","authors":"Jae-Young Kim,&nbsp;Jae-Sung Lee,&nbsp;Yong-Ho Jo,&nbsp;Hong-Gu Lee","doi":"10.5187/jast.2022.e117","DOIUrl":"https://doi.org/10.5187/jast.2022.e117","url":null,"abstract":"<p><p>In this study, rumen temperature and environment in estral and non-estral Korean Native breeding cattle were evaluated by using a bolus sensor. Behavioral and physiological changes in study animals were also assessed. To assess the rumen temperature and environment, we inserted bolus sensors into 12 Korean Native cattle with an average age of 35.5 months, then measured temperature and activity within the rumen using the wireless bolus sensor. Drinking, feeding and mounting behavior, and measured vaginal temperature and levels of intravaginal mucus resistance were recorded. We found that cattle in estrus exhibited more acts of mounting (37.4 vs. 0 times/day), increased vaginal temperature (39.0°C vs. 38.4°C), and decreased vaginal mucus resistance (136.3 Ω vs 197.4 Ω), compared with non-estral animals. Furthermore, increased levels of rumen activity were most significant in estrus cattle at the highest activity levels (<i>p</i> < 0.01). Overall, the estrus group exhibited increased rumen temperature (<i>p</i> = 0.01), compared with the non-estrus group. In conclusion, the results of this study not only provide basic physiological data related to estrus in improved Korean Native breeding cattle, but also suggest that monitoring of rumen temperature and activity might be used as an effective smart device for estrus detection.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 3","pages":"579-587"},"PeriodicalIF":2.3,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/d8/5c/jast-65-3-579.PMC10271928.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10035447","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Automatic identification and analysis of multi-object cattle rumination based on computer vision. 基于计算机视觉的多目标牛反刍行为自动识别与分析。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-05-01 DOI: 10.5187/jast.2022.e87
Yueming Wang, Tiantian Chen, Baoshan Li, Qi Li

Rumination in cattle is closely related to their health, which makes the automatic monitoring of rumination an important part of smart pasture operations. However, manual monitoring of cattle rumination is laborious and wearable sensors are often harmful to animals. Thus, we propose a computer vision-based method to automatically identify multi-object cattle rumination, and to calculate the rumination time and number of chews for each cow. The heads of the cattle in the video were initially tracked with a multi-object tracking algorithm, which combined the You Only Look Once (YOLO) algorithm with the kernelized correlation filter (KCF). Images of the head of each cow were saved at a fixed size, and numbered. Then, a rumination recognition algorithm was constructed with parameters obtained using the frame difference method, and rumination time and number of chews were calculated. The rumination recognition algorithm was used to analyze the head image of each cow to automatically detect multi-object cattle rumination. To verify the feasibility of this method, the algorithm was tested on multi-object cattle rumination videos, and the results were compared with the results produced by human observation. The experimental results showed that the average error in rumination time was 5.902% and the average error in the number of chews was 8.126%. The rumination identification and calculation of rumination information only need to be performed by computers automatically with no manual intervention. It could provide a new contactless rumination identification method for multi-cattle, which provided technical support for smart pasture.

牛的反刍行为与健康密切相关,因此反刍行为的自动监测是智能牧场运营的重要组成部分。然而,人工监测牛的反刍是费力的,可穿戴传感器往往对动物有害。为此,我们提出了一种基于计算机视觉的多目标牛反刍自动识别方法,并计算出每头牛的反刍时间和咀嚼次数。视频中的牛头最初使用多目标跟踪算法进行跟踪,该算法结合了You Only Look Once (YOLO)算法和kernel correlation filter (KCF)算法。每头牛的头部图像都以固定的大小保存,并编号。然后,利用帧差法获得的参数构建反刍识别算法,计算反刍时间和咀嚼次数;利用反刍识别算法对每头牛的头部图像进行分析,自动检测多目标牛的反刍行为。为了验证该方法的可行性,对多目标牛反刍视频进行了测试,并将结果与人工观察结果进行了比较。实验结果表明,反刍时间平均误差为5.902%,咀嚼次数平均误差为8.126%。反刍识别和反刍信息的计算只需由计算机自动完成,无需人工干预。该方法可为多头牛提供一种新的非接触式反刍识别方法,为智能牧场提供技术支持。
{"title":"Automatic identification and analysis of multi-object cattle rumination based on computer vision.","authors":"Yueming Wang,&nbsp;Tiantian Chen,&nbsp;Baoshan Li,&nbsp;Qi Li","doi":"10.5187/jast.2022.e87","DOIUrl":"https://doi.org/10.5187/jast.2022.e87","url":null,"abstract":"<p><p>Rumination in cattle is closely related to their health, which makes the automatic monitoring of rumination an important part of smart pasture operations. However, manual monitoring of cattle rumination is laborious and wearable sensors are often harmful to animals. Thus, we propose a computer vision-based method to automatically identify multi-object cattle rumination, and to calculate the rumination time and number of chews for each cow. The heads of the cattle in the video were initially tracked with a multi-object tracking algorithm, which combined the You Only Look Once (YOLO) algorithm with the kernelized correlation filter (KCF). Images of the head of each cow were saved at a fixed size, and numbered. Then, a rumination recognition algorithm was constructed with parameters obtained using the frame difference method, and rumination time and number of chews were calculated. The rumination recognition algorithm was used to analyze the head image of each cow to automatically detect multi-object cattle rumination. To verify the feasibility of this method, the algorithm was tested on multi-object cattle rumination videos, and the results were compared with the results produced by human observation. The experimental results showed that the average error in rumination time was 5.902% and the average error in the number of chews was 8.126%. The rumination identification and calculation of rumination information only need to be performed by computers automatically with no manual intervention. It could provide a new contactless rumination identification method for multi-cattle, which provided technical support for smart pasture.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 3","pages":"519-534"},"PeriodicalIF":2.3,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/fb/37/jast-65-3-519.PMC10271932.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10017914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Effects of dietary supplementation of Pediococcus pentosaceus strains from kimchi in weaned piglet challenged with Escherichia coli and Salmonella enterica. 在大肠杆菌和肠炎沙门氏菌攻毒的断奶仔猪饲粮中添加泡菜中戊糖球菌菌株的效果。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-05-01 DOI: 10.5187/jast.2023.e31
Dongcheol Song, Jihwan Lee, Kangheun Kim, Hanjin Oh, Jaewoo An, Seyeon Chang, Hyunah Cho, Sehyun Park, Kyeongho Jeon, Yohan Yoon, Yoonjeong Yoo, Younghyun Cho, Jinho Cho

Escherichia coli (E. coli) and Salmonella enterica (SE) infections in pigs are major source associated with enteric disease such as post weaning diarrhea. The aim of this study was to investigate the effects of Pediococcus pentosaceus in weaned piglets challenged with pathogen bacteria. In Experiment.1 90 weaned piglets with initial body weights of 8.53 ± 0.34 kg were assigned to 15 treatments for 2 weeks. The experiments were conducted two trials in a 2 × 5 factorial arrangement of treatments consisting of two levels of challenge (challenge and non-challenge) with E. coli and SE, respectively and five levels of probiotics (Control, Lactobacillus plantarum [LA], Pediococcus pentosaceus SMFM2016-WK1 [38W], Pediococcus acidilactici K [PK], Lactobacillus reuteri PF30 [PF30]). In Experiment.2 a total of 30 weaned pigs (initial body weight of 9.84 ± 0.85 kg) were used in 4 weeks experiment. Pigs were allocated to 5 groups in a randomized complete way with 2 pens per group and 3 pigs per pen. Supplementation of LA and 38W improved (p < 0.05) growth performance, intestinal pathogen bacteria count, fecal noxious odor and diarrhea incidence. In conclusion, supplementation of 38W strains isolated from white kimchi can act as probiotics by inhibiting E. coli and SE.

猪的大肠杆菌(E. coli)和肠沙门氏菌(SE)感染是与断奶后腹泻等肠道疾病相关的主要来源。本研究旨在探讨戊糖Pediococcus penttosaceus对感染致病菌的断奶仔猪的影响。试验1选用90头初始体重为8.53±0.34 kg的断奶仔猪,分为15个处理,为期2周。试验采用2 × 5因子处理,分别采用大肠杆菌和SE两种攻毒水平(攻毒和非攻毒)和5种益生菌水平(对照、植物乳杆菌[LA]、戊糖Pediococcus SMFM2016-WK1 [38W]、酸化Pediococcus K [PK]、罗伊氏乳杆菌PF30 [PF30])。试验2选用初体重为9.84±0.85 kg的断奶仔猪30头,进行为期4周的试验。试验采用完全随机法分为5组,每组2个猪圈,每个猪圈3头猪。添加LA和38W提高了仔猪生长性能、肠道病原菌数量、粪便异味和腹泻发生率(p < 0.05)。综上所述,添加从白泡菜中分离的38W菌株可以抑制大肠杆菌和SE,起到益生菌的作用。
{"title":"Effects of dietary supplementation of <i>Pediococcus pentosaceus</i> strains from kimchi in weaned piglet challenged with <i>Escherichia coli</i> and <i>Salmonella enterica</i>.","authors":"Dongcheol Song,&nbsp;Jihwan Lee,&nbsp;Kangheun Kim,&nbsp;Hanjin Oh,&nbsp;Jaewoo An,&nbsp;Seyeon Chang,&nbsp;Hyunah Cho,&nbsp;Sehyun Park,&nbsp;Kyeongho Jeon,&nbsp;Yohan Yoon,&nbsp;Yoonjeong Yoo,&nbsp;Younghyun Cho,&nbsp;Jinho Cho","doi":"10.5187/jast.2023.e31","DOIUrl":"https://doi.org/10.5187/jast.2023.e31","url":null,"abstract":"<p><p><i>Escherichia coli</i> (<i>E. coli</i>) and <i>Salmonella enterica</i> (SE) infections in pigs are major source associated with enteric disease such as post weaning diarrhea. The aim of this study was to investigate the effects of <i>Pediococcus pentosaceus</i> in weaned piglets challenged with pathogen bacteria. In Experiment.1 90 weaned piglets with initial body weights of 8.53 ± 0.34 kg were assigned to 15 treatments for 2 weeks. The experiments were conducted two trials in a 2 × 5 factorial arrangement of treatments consisting of two levels of challenge (challenge and non-challenge) with <i>E. coli</i> and SE, respectively and five levels of probiotics (Control, <i>Lactobacillus plantarum</i> [LA], <i>Pediococcus pentosaceus</i> SMFM2016-WK1 [38W], <i>Pediococcus acidilactici</i> K [PK], <i>Lactobacillus reuteri</i> PF30 [PF30]). In Experiment.2 a total of 30 weaned pigs (initial body weight of 9.84 ± 0.85 kg) were used in 4 weeks experiment. Pigs were allocated to 5 groups in a randomized complete way with 2 pens per group and 3 pigs per pen. Supplementation of LA and 38W improved (p < 0.05) growth performance, intestinal pathogen bacteria count, fecal noxious odor and diarrhea incidence. In conclusion, supplementation of 38W strains isolated from white kimchi can act as probiotics by inhibiting <i>E. coli</i> and SE.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 3","pages":"611-626"},"PeriodicalIF":2.3,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/7c/90/jast-65-3-611.PMC10271919.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9715793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Differences in bedding material could alter the growth performance of White Pekin ducks raised for 42 days. 垫料的不同会改变饲养42 d的白北京鸭的生长性能。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-03-01 DOI: 10.5187/jast.2022.e116
Elijah Ogola Oketch, Yu Bin Kim, Myunghwan Yu, Jun Seon Hong, Shan Randima Nawarathne, Jung Min Heo

The effect of different commercially available bedding materials on the growth performance and carcass characteristics of ducks for 42 days was investigated. 336 one-day-old White-Pekin ducklings (60.48 ± 0.16 g) were randomly allocated into 24-floor pens with one of the three beddings namely i) coco peat, ii) rice husks, or iii) sawdust. 14 ducklings per pen and 8 replicate pens per bedding material were used. Birds were fed a starter diet from days 1-21 and a grower diet from days 22-42. Weekly growth performance evaluation was conducted for the average body weight, weight gains, daily feed intake, and feed conversion efficiency. One bird per pen was sacrificed on day 42 for the evaluation of carcass characteristics including the carcass, breast, and leg muscle percentages. Breast and leg muscle samples were then collected and analyzed for their proximate and pH values. Higher body weights (p < 0.05) were noticed with rice husks on day 42 only. Improved daily gains (p < 0.05) were also noticed for birds raised with rice husks over the entire period (days 1-42). Concerning feed intake, higher values (p < 0.05) were similarly noted with rice husks for the grower phase (days 22-42), and the entire experimental period (days 1-42). Marginally improved feed intake values were also noted with the use of rice husks as the bedding materials on day 42 (p = 0.092). Improved feed efficiency (p < 0.05) was noticed with rice husks on day 35, the grower period, and the entire 42-day period. However, no significant differences were noticed for most of the carcass characteristics that were evaluated. Nevertheless, higher (p < 0.05) pH values for the breast muscle were noticed with the use of coco peat and sawdust as the bedding. Conclusively, the bedding type could have a significant impact on the growth performance of ducks without adverse effects on carcass characteristics. The use of rice husks as bedding might be advantageous and is therefore recommended.

研究了不同市售垫料对42 d肉鸭生长性能和胴体特性的影响。试验将336只1日龄白京鸭(60.48±0.16 g)随机分配到24层的围栏中,围栏的垫层分别为:1)可可泥炭、2)稻壳、3)木屑。每栏14只,每层垫料8个重复栏。试验第1 ~ 21天饲喂初级饲粮,第22 ~ 42天饲喂生长饲粮。对平均体重、增重、日采食量和饲料转化效率进行周生长性能评价。第42天,每栏处死1只,评价胴体特征,包括胴体、胸肌和腿肌百分比。然后收集乳房和腿部肌肉样本并分析其近似值和pH值。仅在第42天,添加稻壳可显著提高肉鸡的体重(p < 0.05)。在整个饲养期内(第1 ~ 42天),用稻壳饲养的雏鸟日增重也显著提高(p < 0.05)。在采食量方面,生长期(22 ~ 42 d)和整个试验期(1 ~ 42 d)稻壳的采食量均显著高于对照组(p < 0.05)。在第42天,使用稻壳作为床上材料也略微提高了采食量(p = 0.092)。在第35天、生育期和整个42 d期间,稻壳均显著提高了饲料效率(p < 0.05)。然而,在大多数被评估的胴体特征上没有发现显著差异。然而,使用椰子泥炭和锯末作为垫层时,乳房肌肉的pH值较高(p < 0.05)。综上所述,垫层类型对鸭的生长性能有显著影响,但对胴体特性没有不利影响。使用稻壳作为垫层可能是有利的,因此建议使用。
{"title":"Differences in bedding material could alter the growth performance of White Pekin ducks raised for 42 days.","authors":"Elijah Ogola Oketch,&nbsp;Yu Bin Kim,&nbsp;Myunghwan Yu,&nbsp;Jun Seon Hong,&nbsp;Shan Randima Nawarathne,&nbsp;Jung Min Heo","doi":"10.5187/jast.2022.e116","DOIUrl":"https://doi.org/10.5187/jast.2022.e116","url":null,"abstract":"<p><p>The effect of different commercially available bedding materials on the growth performance and carcass characteristics of ducks for 42 days was investigated. 336 one-day-old White-Pekin ducklings (60.48 ± 0.16 g) were randomly allocated into 24-floor pens with one of the three beddings namely i) coco peat, ii) rice husks, or iii) sawdust. 14 ducklings per pen and 8 replicate pens per bedding material were used. Birds were fed a starter diet from days 1-21 and a grower diet from days 22-42. Weekly growth performance evaluation was conducted for the average body weight, weight gains, daily feed intake, and feed conversion efficiency. One bird per pen was sacrificed on day 42 for the evaluation of carcass characteristics including the carcass, breast, and leg muscle percentages. Breast and leg muscle samples were then collected and analyzed for their proximate and pH values. Higher body weights (p < 0.05) were noticed with rice husks on day 42 only. Improved daily gains (<i>p</i> < 0.05) were also noticed for birds raised with rice husks over the entire period (days 1-42). Concerning feed intake, higher values (<i>p</i> < 0.05) were similarly noted with rice husks for the grower phase (days 22-42), and the entire experimental period (days 1-42). Marginally improved feed intake values were also noted with the use of rice husks as the bedding materials on day 42 (<i>p</i> = 0.092). Improved feed efficiency (<i>p</i> < 0.05) was noticed with rice husks on day 35, the grower period, and the entire 42-day period. However, no significant differences were noticed for most of the carcass characteristics that were evaluated. Nevertheless, higher (<i>p</i> < 0.05) pH values for the breast muscle were noticed with the use of coco peat and sawdust as the bedding. Conclusively, the bedding type could have a significant impact on the growth performance of ducks without adverse effects on carcass characteristics. The use of rice husks as bedding might be advantageous and is therefore recommended.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 2","pages":"377-386"},"PeriodicalIF":2.3,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/30/f8/jast-65-2-377.PMC10119447.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9423112","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Measurement of greenhouse gas emissions from a dairy cattle barn in Korea. 韩国乳牛场温室气体排放量的测量。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-03-01 DOI: 10.5187/jast.2023.e25
Eska Nugrahaeningtyas, So-Hee Jeong, Eliza Novianty, Mohammad Ataallahi, Geun Woo Park, Kyu-Hyun Park

Korea is currently developing country-specific emission factors to support the 2050 zero-carbon campaign. Dairy cattle represent one of the largest livestock industries in Korea, and the industry is estimated to continue increasing because of an increase in milk demand. However, country-specific emission factors for dairy cattle are currently only available for calculating methane (CH4) emissions from enteric fermentation. Two experiments were conducted to evaluate CH4 and nitrous oxide (N2O) fluxes from sawdust-bedded barn in dairy cow and steer, as well as dairy cattle manure composting lots. The greenhouse gas (GHG) fluxes were quantified using the open-chamber method and gas chromatography. CH4 fluxes from steer, dairy cow, and manure compost were 27.88 ± 5.84, 36.12 ± 10.85, and 259.44 ± 61.78 µg/head/s, respectively. N2O fluxes from steer, dairy cow, and manure compost were 14.04 ± 1.27, 4.11 ± 1.57, and 3.97 ± 1.08 µg/head/s, respectively. The result of this study can be used to construct country-specific data for GHG emissions from manure management. Thus, the application of mitigation strategies can be prioritized based on the GHG profile and targeted source.

目前,韩国正在为2050年零碳运动开发具体的排放因子。奶牛是韩国最大的畜牧业之一,由于牛奶需求的增加,该行业预计将继续增长。然而,奶牛的国别排放因子目前仅可用于计算肠道发酵产生的甲烷(CH4)排放。通过两个试验,对奶牛、阉牛和牛粪堆肥场的木屑层状牲口棚中CH4和氧化亚氮(N2O)通量进行了评价。采用开室法和气相色谱法对温室气体(GHG)通量进行定量分析。阉牛、奶牛和粪肥的CH4通量分别为27.88±5.84、36.12±10.85和259.44±61.78µg/头/s。牛、奶牛和粪肥的N2O通量分别为14.04±1.27、4.11±1.57和3.97±1.08µg/头/s。本研究的结果可用于构建粪便管理产生的温室气体排放的国别数据。因此,可以根据温室气体概况和目标来源确定减缓战略应用的优先次序。
{"title":"Measurement of greenhouse gas emissions from a dairy cattle barn in Korea.","authors":"Eska Nugrahaeningtyas,&nbsp;So-Hee Jeong,&nbsp;Eliza Novianty,&nbsp;Mohammad Ataallahi,&nbsp;Geun Woo Park,&nbsp;Kyu-Hyun Park","doi":"10.5187/jast.2023.e25","DOIUrl":"https://doi.org/10.5187/jast.2023.e25","url":null,"abstract":"<p><p>Korea is currently developing country-specific emission factors to support the 2050 zero-carbon campaign. Dairy cattle represent one of the largest livestock industries in Korea, and the industry is estimated to continue increasing because of an increase in milk demand. However, country-specific emission factors for dairy cattle are currently only available for calculating methane (CH<sub>4</sub>) emissions from enteric fermentation. Two experiments were conducted to evaluate CH<sub>4</sub> and nitrous oxide (N<sub>2</sub>O) fluxes from sawdust-bedded barn in dairy cow and steer, as well as dairy cattle manure composting lots. The greenhouse gas (GHG) fluxes were quantified using the open-chamber method and gas chromatography. CH<sub>4</sub> fluxes from steer, dairy cow, and manure compost were 27.88 ± 5.84, 36.12 ± 10.85, and 259.44 ± 61.78 µg/head/s, respectively. N<sub>2</sub>O fluxes from steer, dairy cow, and manure compost were 14.04 ± 1.27, 4.11 ± 1.57, and 3.97 ± 1.08 µg/head/s, respectively. The result of this study can be used to construct country-specific data for GHG emissions from manure management. Thus, the application of mitigation strategies can be prioritized based on the GHG profile and targeted source.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 2","pages":"459-472"},"PeriodicalIF":2.3,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/dc/1d/jast-65-2-459.PMC10119453.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9416663","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Complete genome sequence of functional probiotic candidate Lactobacillus amylovorus CACC736. 功能性候选益生菌淀粉样乳杆菌CACC736的全基因组序列。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-03-01 DOI: 10.5187/jast.2022.e85
Soyeon Park, Jung-Ae Kim, Hyun-Jun Jang, Dae-Hyuk Kim, Yangseon Kim

Lactobacillus amylovorus CACC736 was originated from swine feces in Korea. The complete genome sequences of the strain contained one circular chromosome (2,057,809 base pair [bp]) with 38.2% guanine-cytosine (GC) content and two circular plasmids, namely, pCACC736-1 and pCACC736-2. The predicted protein-coding genes, which are encoding the clustered regularly interspaced short palindromic repeats (CRISPR)-associated proteins, biosynthesis of bacteriocin (helveticin J), and the related proteins of the bile, acid tolerance. Notably, the genes related to vitamin B-group biosynthesis (riboflavin and cobalamin) were also found in L. amylovorus CACC736. Collectively, the complete genome sequence of the L. amylovorus CACC736 will aid in the development of functional probiotics in the animal industry.

淀粉样乳杆菌CACC736来源于韩国的猪粪便。该菌株全基因组序列包含一条环状染色体(2057809碱基对[bp]),鸟嘌呤-胞嘧啶(GC)含量为38.2%,两个环状质粒分别为pCACC736-1和pCACC736-2。预测的蛋白质编码基因,编码聚集规律间隔短回文重复序列(CRISPR)相关蛋白,生物合成细菌素(helveticin J),以及胆汁、酸耐受性相关蛋白。值得注意的是,在L. amylovorus CACC736中也发现了与维生素b族生物合成相关的基因(核黄素和钴胺素)。总的来说,淀粉状乳杆菌CACC736的全基因组序列将有助于动物工业中功能性益生菌的开发。
{"title":"Complete genome sequence of functional probiotic candidate <i>Lactobacillus amylovorus</i> CACC736.","authors":"Soyeon Park,&nbsp;Jung-Ae Kim,&nbsp;Hyun-Jun Jang,&nbsp;Dae-Hyuk Kim,&nbsp;Yangseon Kim","doi":"10.5187/jast.2022.e85","DOIUrl":"https://doi.org/10.5187/jast.2022.e85","url":null,"abstract":"<p><p><i>Lactobacillus amylovorus</i> CACC736 was originated from swine feces in Korea. The complete genome sequences of the strain contained one circular chromosome (2,057,809 base pair [bp]) with 38.2% guanine-cytosine (GC) content and two circular plasmids, namely, pCACC736-1 and pCACC736-2. The predicted protein-coding genes, which are encoding the clustered regularly interspaced short palindromic repeats (CRISPR)-associated proteins, biosynthesis of bacteriocin (helveticin J), and the related proteins of the bile, acid tolerance. Notably, the genes related to vitamin B-group biosynthesis (riboflavin and cobalamin) were also found in <i>L. amylovorus</i> CACC736. Collectively, the complete genome sequence of the <i>L. amylovorus</i> CACC736 will aid in the development of functional probiotics in the animal industry.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 2","pages":"473-477"},"PeriodicalIF":2.3,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/a6/10/jast-65-2-473.PMC10119451.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9776381","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A case study of CO2 emissions from beef and pork production in South Korea. 韩国牛肉和猪肉生产的二氧化碳排放案例研究。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-03-01 DOI: 10.5187/jast.2022.e109
Dawoon Jeong, Young Soon Kim, Soohyun Cho, Inho Hwang

The current study evaluated carbon dioxide (CO2) emissions from beef and pork production and distribution chains in the South Korean meat industry. Data from industrial example farms and slaughterhouses were assessed on the basis of both the guidelines from the United Kingdom's Publicly Available Specification (PAS) 2050:2011 and the Korea Environmental Industry & Technology Institute carbon footprint calculation. The main factors for our estimations were animal feeds, manure waste, transportation, energy and water, refrigerants, and package data. Our analyses show that 16.55 kg CO2 equivalent (eq) was emitted during the production of 1 kg of live cattle. When retail yields and packing processes were considered, the CO2-eq of 1 kg of packaged Hanwoo beef was 27.86 kg. As for pigs, emissions from 1 kg of live pigs and packaged pork meat were 2.62 and 12.75 kg CO2-eq, respectively. While we gathered data from only two farms and slaughterhouses and our findings can therefore not be extrapolated to all meats produced in the South Korean meat industry, they indicate that manure waste is the greatest factor affecting ultimate CO2 emissions of packaged meats.

目前的研究评估了韩国肉类工业中牛肉和猪肉生产和分销链的二氧化碳排放。来自工业农场和屠宰场的数据是根据英国公开规范(PAS) 2050:2011的指导方针和韩国环境产业与技术研究所的碳足迹计算进行评估的。我们估计的主要因素是动物饲料、粪便废物、运输、能源和水、制冷剂和包装数据。我们的分析表明,在生产1公斤活牛的过程中,排放了16.55公斤二氧化碳当量(eq)。考虑到零售产量和包装过程,1公斤包装韩宇牛肉的二氧化碳当量为27.86公斤。生猪方面,每千克生猪和包装猪肉的排放量分别为2.62千克和12.75千克二氧化碳当量。虽然我们只收集了两个农场和屠宰场的数据,因此我们的发现不能推断出韩国肉类行业生产的所有肉类,但它们表明粪便废物是影响包装肉类最终二氧化碳排放的最大因素。
{"title":"A case study of CO<sub>2</sub> emissions from beef and pork production in South Korea.","authors":"Dawoon Jeong,&nbsp;Young Soon Kim,&nbsp;Soohyun Cho,&nbsp;Inho Hwang","doi":"10.5187/jast.2022.e109","DOIUrl":"https://doi.org/10.5187/jast.2022.e109","url":null,"abstract":"<p><p>The current study evaluated carbon dioxide (CO<sub>2</sub>) emissions from beef and pork production and distribution chains in the South Korean meat industry. Data from industrial example farms and slaughterhouses were assessed on the basis of both the guidelines from the United Kingdom's Publicly Available Specification (PAS) 2050:2011 and the Korea Environmental Industry & Technology Institute carbon footprint calculation. The main factors for our estimations were animal feeds, manure waste, transportation, energy and water, refrigerants, and package data. Our analyses show that 16.55 kg CO<sub>2</sub> equivalent (eq) was emitted during the production of 1 kg of live cattle. When retail yields and packing processes were considered, the CO<sub>2</sub>-eq of 1 kg of packaged Hanwoo beef was 27.86 kg. As for pigs, emissions from 1 kg of live pigs and packaged pork meat were 2.62 and 12.75 kg CO<sub>2</sub>-eq, respectively. While we gathered data from only two farms and slaughterhouses and our findings can therefore not be extrapolated to all meats produced in the South Korean meat industry, they indicate that manure waste is the greatest factor affecting ultimate CO<sub>2</sub> emissions of packaged meats.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 2","pages":"427-440"},"PeriodicalIF":2.3,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/d2/5b/jast-65-2-427.PMC10119444.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9792102","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Identification of long non-coding RNA-mRNA interactions and genome-wide lncRNA annotation in animal transcriptome profiling. 动物转录组分析中长链非编码RNA-mRNA相互作用的鉴定和全基因组lncRNA注释。
IF 2.3 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2023-03-01 DOI: 10.5187/jast.2023.e17
Yoon-Been Park, Jun-Mo Kim

Protein-translated mRNA analysis has been extensively used to determine the function of various traits in animals. The non-coding RNA (ncRNA), which was known to be non-functional because it was not encoded as a protein, was re-examined as it was studied to actually function. One of the ncRNAs, long non-coding RNA (lncRNA), is known to have a function of regulating mRNA expression, and its importance is emerging. Therefore, lncRNAs are currently being used to understand the traits of various animals as well as human diseases. However, studies on lncRNA annotation and its functions are still lacking in most animals except humans and mice. lncRNAs have unique characteristics of lncRNAs and interact with mRNA through various mechanisms. In order to make lncRNA annotations in animals in the future, it is essential to understand the characteristics of lncRNAs and the mechanisms by which lncRNAs function. In addition, this will allow lncRNAs to be used for a wider variety of traits in a wider range of animals, and it is expected that integrated analysis using other biological information will be possible.

蛋白质翻译mRNA分析已被广泛用于确定动物各种性状的功能。非编码RNA (ncRNA),被认为是无功能的,因为它不是作为蛋白质编码的,在研究其实际功能时被重新检查。其中一种ncrna,长链非编码RNA (lncRNA),已知具有调节mRNA表达的功能,其重要性正在显现。因此,lncrna目前被用于了解各种动物以及人类疾病的特征。然而,除了人类和小鼠外,大多数动物对lncRNA注释及其功能的研究仍然缺乏。lncRNAs具有lncRNAs特有的特性,并通过多种机制与mRNA相互作用。为了将来能够在动物中进行lncRNA的注释,了解lncRNA的特性以及lncRNA的功能机制至关重要。此外,这将允许lncrna在更广泛的动物中用于更广泛的性状,并且预计使用其他生物信息的综合分析将成为可能。
{"title":"Identification of long non-coding RNA-mRNA interactions and genome-wide lncRNA annotation in animal transcriptome profiling.","authors":"Yoon-Been Park,&nbsp;Jun-Mo Kim","doi":"10.5187/jast.2023.e17","DOIUrl":"https://doi.org/10.5187/jast.2023.e17","url":null,"abstract":"<p><p>Protein-translated mRNA analysis has been extensively used to determine the function of various traits in animals. The non-coding RNA (ncRNA), which was known to be non-functional because it was not encoded as a protein, was re-examined as it was studied to actually function. One of the ncRNAs, long non-coding RNA (lncRNA), is known to have a function of regulating mRNA expression, and its importance is emerging. Therefore, lncRNAs are currently being used to understand the traits of various animals as well as human diseases. However, studies on lncRNA annotation and its functions are still lacking in most animals except humans and mice. lncRNAs have unique characteristics of lncRNAs and interact with mRNA through various mechanisms. In order to make lncRNA annotations in animals in the future, it is essential to understand the characteristics of lncRNAs and the mechanisms by which lncRNAs function. In addition, this will allow lncRNAs to be used for a wider variety of traits in a wider range of animals, and it is expected that integrated analysis using other biological information will be possible.</p>","PeriodicalId":14923,"journal":{"name":"Journal of Animal Science and Technology","volume":"65 2","pages":"293-310"},"PeriodicalIF":2.3,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/21/89/jast-65-2-293.PMC10119446.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9478816","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
期刊
Journal of Animal Science and Technology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1