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Characterization and expression of phenylalanine hydroxylase in rabbits under different feeding conditions of faba bean (Vicia faba L.) 不同饲养条件下家兔蚕豆(Vicia faba L.)苯丙氨酸羟化酶的表征及表达
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100207
Sayed Ahmed Hanan I., Shebl Ghada, Hamza Mohamed, Haider Asraf
Phenylalanine hydroxylase (PAH) enzyme plays a key role in dopamine biosynthesis in humans, rabbits, and most mammals. Rabbits, as an ideal model, were used to study the expression of the PAH gene under different feeding conditions of faba bean (Vicia faba L., Sakha 3). PAH genes (≈1,400 bp) in control and faba beanfed rabbits were PCR amplified, sequenced, and aligned with the reference gene (acc. no. 013672). The first 320 pb of PAH sequences representing the N-terminal of the gene was almost identical. High genetic similarity values were detected in PAH gene sequences for both control and faba bean-fed rabbits with the reference gene (99.80%). The results indicated very little sequence variations, which have no effect on the enzyme activity in both control and faba bean-fed rabbits. Real Time quantitative Polymerase Chain Reaction (RT-qPCR) analysis showed that the PAH gene was overexpressed after feeding on dry faba bean form compared with feeding on the fresh form. Furthermore, Western blotting results reflected superior PAH protein due to the direct influence of feeding on dry faba bean. In conclusion, our findings indicated the direct effect of fresh and dry faba bean diet on increasing phenylalanine amino acid in rabbits’ blood, which consequently increases the expression of PAH gene, thus improving the quality of life for humans.
苯丙氨酸羟化酶(PAH)酶在人类、兔子和大多数哺乳动物的多巴胺生物合成中起着关键作用。以家兔为理想模型,研究了不同饲养条件下蚕豆(Vicia faba L., Sakha 3)中PAH基因的表达。对对照家兔和饲喂蚕豆家兔的PAH基因(约1,400 bp)进行PCR扩增、测序,并与内参基因(acc。不。013672)。代表该基因n端的前320 pb多环芳烃序列几乎相同。对照家兔和蚕豆饲家兔的PAH基因序列具有较高的遗传相似性(99.80%)。结果表明,在对照组和蚕豆饲兔中,酶的序列变化很小,对酶的活性没有影响。实时定量聚合酶链反应(RT-qPCR)分析结果显示,采食干蚕豆比采食新鲜蚕豆多环芳烃基因过表达。此外,Western blotting结果表明,由于摄食对干蚕豆的直接影响,PAH蛋白含量较高。综上所述,我们的研究结果表明,鲜蚕豆和干蚕豆的直接作用是增加家兔血液中的苯丙氨酸氨基酸,从而增加PAH基因的表达,从而提高人类的生活质量。
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引用次数: 0
Genetic polymorphism of soybean genotypes with contrasting levels of phosphatidylcholine, protein, and lipoxygenase-2 大豆基因型的遗传多态性与磷脂酰胆碱、蛋白质和脂氧合酶-2水平的对比
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100201
Anshu Aseem Kumar, Tayalkar Trupti, R. Anita, K. Vineet, Parmar Hamendra Singh
For the mapping of quantitative trait loci associated with a particular trait or introgression of desirable traits into a variety from donor parent through marker-assisted backcross breeding, parental polymorphism survey is the first prerequisite. In the present study, a total of 695 simple sequence repeats (SSR) markers spanning over 20 linkage groups were surveyed for parental polymorphism in 5 parental combinations comprising 7 soybean genotypes, namely NRC151, PS1476, IC275, IC574373, AVKS215, JS20-34, and JS20-98, with varying levels of phosphatidylcholine (PC), protein, and lipoxygenase-2. Five different parental combinations, namely NRC151 × IC275, PS1476 × IC275, NRC151 × IC574373, JS20-34 × AVKS215, and JS20-98 × AVKS215, exhibited 40.43%, 43.02%, 36.26%, 39.42%, and 41.29% parental polymorphisms, respectively. Polymorphic markers identified in these parental combinations can be utilized for genotyping of second filial generation (F2)/ recombinant inbred lines (RILs) population generated for the identification of genomic regions associated with PC, protein content, and for the recovery of recurrent parent genome content of respective recurrent parent for development of lipoxygenase-2 free high-yielding soybean genotypes.
为了通过标记辅助回交育种从供体亲本获得与特定性状相关的数量性状位点或将所需性状渗入到品种中,亲本多态性调查是第一个先决条件。本研究利用NRC151、PS1476、IC275、IC574373、AVKS215、JS20-34和JS20-98等7个大豆基因型的5个亲本组合,在不同水平的磷脂酰胆碱(PC)、蛋白质和脂氧合酶-2水平下,对20多个连锁组的695个SSR标记进行了亲本多态性分析。NRC151 × IC275、PS1476 × IC275、NRC151 × IC574373、JS20-34 × AVKS215和JS20-98 × AVKS215的亲本多态性分别为40.43%、43.02%、36.26%、39.42%和41.29%。在这些亲本组合中鉴定出的多态性标记可用于子代二代(F2)/重组自交系(RILs)群体的基因分型,以鉴定与PC、蛋白质含量相关的基因组区域,并恢复各亲本的复发亲本基因组含量,以发育无脂氧合酶-2高产大豆基因型。
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引用次数: 0
Lemongrass oil disrupts the biofilm of Candida albicans MTCC 1637T on soft denture reliners at lower concentrations compared to thyme and tea tree oils 与百里香和茶树油相比,柠檬草油在较低浓度下破坏软义齿衬套上白色念珠菌MTCC 1637T的生物膜
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100214
Patil Aishwarya Rajendra, M. Ravi, Swamy K.N. Raghavendra, Archer Ann Catherine, S. Sowmya, Soans Sanya Hazel, Achar Raghu Ram
Aishwarya Rajendra Patil1, Ravi M.B.1* , Raghavendra Swamy K.N.1, Ann Catherine Archer2 , Sowmya S1, Sanya Hazel Soans2, Raghu Ram Achar3 1Department of Prosthodontics, JSS Dental College and Hospital, JSS Academy of Higher Education and Research, Mysuru, India. 2Department of Microbiology, School of Life Sciences, JSS Academy of Higher Education Research, Mysuru, India. 3Division of Biochemistry, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, India.
Aishwarya Rajendra pati1, Ravi M.B.1*, Raghavendra Swamy k.n 1, Ann Catherine Archer2, Sowmya S1, Sanya Hazel Soans2, Raghu Ram Achar3 1 JSS高等教育与研究学院JSS口腔学院与医院修复科,印度,迈索尔2 JSS高等教育与研究学院生命科学学院微生物学系,印度,迈索尔3 JSS高等教育与研究学院生命科学学院生物化学学部,印度,迈索尔
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引用次数: 0
Report of the incidence of a new rare strain of Cladosporium species and incidence of three other Cladosporium species in the intramural environment of Bengaluru, India 一种新的枝孢菌属罕见菌株在印度班加罗尔郊区环境中的发病率及其他三种枝孢菌属的发病率报告
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100211
Marigoudar Jyoti Bharamgoud, Kuppan Narendra
The prevalence of airborne Cladosporium was investigated for seasonal occurrence in the internal environment (bedroom) in two adjacent localities of Bengaluru. The foremost objective was to study the fungal diversity in air by culturing it on nutrient media from April 2018 to March 2019. The incidence of airborne Cladosporium species exhibited significant deviation in the localities. The sampling exhibited the highest number of Cladosporium species in the winter. Cladosporium oxysporum showed the highest prevalence, followed by Cladosporium bruhnei, Cladosporium cladosporioides, and Cladosporium herbarum. The period with a highest value of CFUs (Colony Forming Units) concentration interrelated with seasonal distribution indoor aerofungi. The current study also involved the first time molecular characterization of a new rare strain of C. bruhnei obtained from the bedroom. Using 18S rDNA sequencing, the new strain (LP3CO) was identified. The sequence was submitted to the GenBank and an accession number was established. The major fungal species identified from the bedrooms were associated with the results obtained from fungal allergen detection tests carried out on respiratory allergy patients in a major hospital in Bengaluru.
调查了室内环境(卧室)空气传播枝孢子虫的季节性流行情况。2018年4月至2019年3月,通过在营养培养基上培养真菌,研究空气中真菌的多样性。空气传播枝孢子菌的发病率在不同地区有明显的差异。样地枝孢菌种类在冬季最多。其中,尖孢枝孢子菌感染率最高,其次为布氏枝孢子菌、枝孢子枝孢子菌和草本枝孢子菌。菌落形成单位(CFUs)浓度最高的时期与室内空气真菌的季节分布有关。目前的研究还涉及首次从卧室获得的一种新的罕见菌株的分子特征。通过18S rDNA测序,鉴定出新菌株LP3CO。将序列提交到GenBank,并建立加入号。从卧室中鉴定出的主要真菌种类与在班加罗尔一家大医院对呼吸道过敏患者进行的真菌过敏原检测试验的结果有关。
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引用次数: 1
Leaf senescence and its regulation with phytohormones and essential elements: An overview 叶片衰老及其与植物激素和必需元素的调控:综述
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100222
Singh Shatrupa, S. Madhulika, Bisht Sanskriti, Sharma Jai Gopal
Leaf senescence is a crucial developing phase that requires the orderly disassembly of macromolecules in order to transport the nutrients from leaves into other organs and is life-threatening for plants capability. The leaf senescence is the result of a multifaceted and highly regulated mechanism involving the corresponding activities of several pathways. A lot of progress has been made recently in understanding signaling pathways of senescence, as well as how to complete the orderly process of degeneration. This paper mainly covers recent developments in the senescence of leaf and describes the function of phytohormones and essential elements from the molecular network dynamics.
叶片衰老是一个重要的发育阶段,需要大分子的有序分解,以便将营养物质从叶片输送到其他器官,这对植物的能力是致命的。叶片衰老是一个多方面的、高度调控的机制,涉及多种途径的相应活动。近年来,在了解衰老的信号通路以及如何完成有序的退化过程方面取得了许多进展。本文主要介绍了叶片衰老的最新研究进展,并从分子网络动力学的角度阐述了植物激素和必需元素的作用。
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引用次数: 2
Synergistic effect of Hydnophytum formicarum tuber and Vatica diospyroides Symington cotyledon extracts with ampicillin on pathogenic bacteria 水合植物块茎和二ospyides Vatica Symington子叶提取物与氨苄西林对致病菌的协同作用
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100202
Keawchai Kanokrat, Chumkaew Parinuch, Permpoonpattana Patima, Srisawat Theera
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引用次数: 2
Cloning and expression of a GH11 xylanase from Bacillus pumilus SSP-34 in Pichia pastoris GS115: Purification and characterization 短小芽孢杆菌SSP-34 GH11木聚糖酶在毕赤酵母GS115中的克隆与表达:纯化与鉴定
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100215
Bhat Sagar Krishna, P. Kavya, Appu Rao Appu Rao Gopala Rao, Kini K Ramachandra
GH11 xylanase from Bacillus pumilus is a monofunctional low molecular weight single polypeptide chain xylanase with biotechnological applications. The codon-optimized xynA gene was modified to replace the signaling factor with Pichia expression system. 876 bp gene was synthesized and expressed in methylotrophic yeast Pichia pastoris GS115. The recombinant protein was purified to apparent homogeneity by conventional protein purifications methods. The specific activity, kinetic parameters Km and Vmax, temperature optima, and pH optima of the recombinant protein were similar to the native protein. The kinetic properties of native and recombinant protein indicated structural similarities of the two. The temperature stability of the recombinant protein was higher than the native protein. The half-life (t1⁄2) at 55°C was 10.5 and 21 minutes for native and recombinant xylanase, respectively. The native GH11 xylanase had a molecular weight of 22 kDa and the recombinant protein had a higher molecular weight of 25 kDa, which could be due to glycosylation. This cloning and expression of the GH11 xylanase in P. pastoris opens the possibilities of 1) production of GH11 xylanases for industrial applications in an economical way 2) creating mutants for improved activity 3) creating mutants for improved thermal stability, and 4) desirable pH optima to meet the industrial requirements.
短小芽孢杆菌GH11木聚糖酶是一种具有生物技术应用价值的单功能低分子量单多肽链木聚糖酶。对密码子优化后的xynA基因进行修饰,用毕赤酵母表达系统代替信号因子。合成了876 bp基因,并在毕赤酵母GS115中表达。采用常规蛋白纯化方法纯化重组蛋白,使其具有明显的均匀性。重组蛋白的比活性、动力学参数Km和Vmax、最适温度和最适pH值与天然蛋白相似。天然蛋白和重组蛋白的动力学性质表明两者在结构上具有相似性。重组蛋白的温度稳定性高于天然蛋白。天然木聚糖酶和重组木聚糖酶在55℃下的半衰期(t1 / 2)分别为10.5 min和21 min。天然GH11木聚糖酶分子量为22 kDa,重组蛋白分子量为25 kDa,这可能是由于糖基化所致。巴斯德酵母中GH11木聚糖酶的克隆和表达为以下方面提供了可能性:1)以经济的方式生产GH11木聚糖酶用于工业应用;2)创造提高活性的突变体;3)创造提高热稳定性的突变体;4)理想的pH优化以满足工业要求。
{"title":"Cloning and expression of a GH11 xylanase from Bacillus pumilus SSP-34 in Pichia pastoris GS115: Purification and characterization","authors":"Bhat Sagar Krishna, P. Kavya, Appu Rao Appu Rao Gopala Rao, Kini K Ramachandra","doi":"10.7324/jabb.2022.100215","DOIUrl":"https://doi.org/10.7324/jabb.2022.100215","url":null,"abstract":"GH11 xylanase from Bacillus pumilus is a monofunctional low molecular weight single polypeptide chain xylanase with biotechnological applications. The codon-optimized xynA gene was modified to replace the signaling factor with Pichia expression system. 876 bp gene was synthesized and expressed in methylotrophic yeast Pichia pastoris GS115. The recombinant protein was purified to apparent homogeneity by conventional protein purifications methods. The specific activity, kinetic parameters Km and Vmax, temperature optima, and pH optima of the recombinant protein were similar to the native protein. The kinetic properties of native and recombinant protein indicated structural similarities of the two. The temperature stability of the recombinant protein was higher than the native protein. The half-life (t1⁄2) at 55°C was 10.5 and 21 minutes for native and recombinant xylanase, respectively. The native GH11 xylanase had a molecular weight of 22 kDa and the recombinant protein had a higher molecular weight of 25 kDa, which could be due to glycosylation. This cloning and expression of the GH11 xylanase in P. pastoris opens the possibilities of 1) production of GH11 xylanases for industrial applications in an economical way 2) creating mutants for improved activity 3) creating mutants for improved thermal stability, and 4) desirable pH optima to meet the industrial requirements.","PeriodicalId":15032,"journal":{"name":"Journal of Applied Biology and Biotechnology","volume":"258 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76210984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Effect of extraction methods and temperature preservation on total anthocyanins compounds of Peristrophe bivalvis L. Merr leaf 不同提取方法及温度保存对双叶花青素总含量的影响
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100218
Thuyet Nguyen Minh, Han Dao Huynh Ngoc, Minh Vo Quang, Tai Ngo Van
This paper proposes anthocyanins extraction from Peristrophe bivalvis L. Merr. (“lá cẩm”) and preservation. Experiments were performed in water as a solvent using two different extraction methods [conventional extraction (CE) and microwave-assisted extraction (MAE)], including different solvent-to-raw material ratios, temperatures/microwave power, and times of extraction. The total anthocyanin in the extract was analyzed by UV-Vis. Multiple regression analysis was applied to analyze the influence of factors and select the optimal parameters for each extraction process. The influence of storage conditions on the quality of extracts from “lá cẩm” leaves was controlled. It was observed that the ratio of solvent and fresh leaf used, temperature/ microwave power, and extraction time all affected the anthocyanin content recovered from the extract when using different extraction techniques. The MAE technique gave superior results compared to the CE method. The solvent used was slightly higher and the extraction time was 6.2 times shorter than that of the CE method. The optimal parameters of each extraction technique are selected. With the CE method, the solvent-to-fresh leaf ratio was 11.22:1; the optimum temperature and time were 88°C and 27.21 minutes resulting in the anthocyanin content in the extract being 25.61 mg/g dry weight basic (db). Meanwhile, with the MAE method, the solventto-fresh leaf ratio used was 10.83:1 (v/w), the microwave power and the optimal extraction time were 600 W and 4.39 minutes, and the obtained extract had an anthocyanin content of 30.97 mg/g db. In addition, the extract was best preserved in the dark and the storage temperature was −9°C. The remaining anthocyanin content after 30 days of storage was 92.35%. The anthocyanin degradation kinetics was also analyzed. Changes in total anthocyanin followed a zero-order reaction kinetic model. The potential of the half-life of anthocyanin was 221, 114, and 19 days at −9°C, 4°C, and 28°C, respectively.
本文提出了从双瓣草中提取花青素的方法。(“ cẩm”)和保存。实验以水为溶剂,采用两种不同的提取方法[常规提取(CE)和微波辅助提取(MAE)],包括不同的溶剂与原料比、温度/微波功率和提取次数。用紫外-可见分光光度法测定提取物中总花青素的含量。采用多元回归分析方法对各提取工艺的影响因素进行分析,优选出最佳提取工艺参数。研究了贮存条件对“l cẩm”叶提取物质量的影响。不同提取工艺对花青素含量的影响有溶剂与鲜叶的配比、提取温度/微波功率、提取时间等。与CE法相比,MAE技术具有更好的结果。溶剂用量略高,提取时间比CE法缩短6.2倍。选择了各种提取工艺的最佳参数。CE法溶剂与鲜叶比为11.22:1;最佳温度为88℃,时间为27.21 min,提取液中花青素含量为25.61 mg/g干重(db)。同时,采用微波提取法,溶剂与鲜叶比为10.83:1 (v/w),微波功率为600 w,最佳提取时间为4.39 min,得到的花青素含量为30.97 mg/g db。此外,提取液在黑暗中保存效果最好,保存温度为- 9°C。贮藏30 d后,剩余花青素含量为92.35%。并对花青素降解动力学进行了分析。总花青素的变化遵循零级反应动力学模型。在- 9°C、4°C和28°C条件下,花青素的潜在半衰期分别为221、114和19天。
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引用次数: 7
Ultrasound-assisted enzymatic hydrolysis of broken Riceberry rice for sugar syrup production as a substrate for bacterial cellulose facial mask development 超声波辅助酶解破碎的米子大米用于糖浆生产作为细菌纤维素面膜开发的底物
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100212
Lomthong Thanasak, Siripornvisal Sirirat, Khunnamwong Pannida
Thanasak Lomthong1* , Sirirat Siripornvisal2, Pannida Khunnamwong3,4 1Division of Biology, Faculty of Science and Technology, Rajamangala University of Technology Thanyaburi, Pathumthani, Thailand. 2Department of Microbiology, Faculty of Science and Technology, Phranakhon Si Ayutthaya Rajabhat University, Ayutthaya, Thailand. 3Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, Thailand. 4Biodiversity Center Kasetsart University (BDCKU), Bangkok, Thailand
Thanasak Lomthong1*, Sirirat Siripornvisal2, Pannida khunnamwong3,4 1泰国巴吞他尼Thanyaburi拉贾曼加拉理工大学科学技术学院生物学部2泰国大城府Phranakhon Si Ayutthaya拉贾曼加拉大学科学技术学院微生物学部3泰国曼谷Kasetsart大学理学院微生物学部4泰国曼谷Kasetsart大学生物多样性中心(BDCKU
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引用次数: 1
Quantification of phytochemicals and in vitro antioxidant activities from various parts of Euphorbia neriifolia Linn. 大黄不同部位植物化学成分及体外抗氧化活性的定量研究。
Q3 Agricultural and Biological Sciences Pub Date : 2022-02-15 DOI: 10.7324/jabb.2022.100217
C. Priya, Janmeda Pracheta
This study aims to investigate the phytochemical content and antioxidant activity of the leaf, stem, latex, and bark of Euphorbia neriifolia (EN) Linn. using the solvent extraction method with petroleum ether, benzene, chloroform, ethyl acetate, methanol, and aqueous extracts. Total tannin content, total saponin content, total flavonoid content, total phenol content, and total flavonol content were investigated using spectrophotometric equivalents of the standards, tannic acid, quillaja, quercetin, gallic acid, and rutin, respectively. The EN extracts of various parts were screened for potential antioxidant activities by hydrogen peroxide scavenging assay (H2O2), ferric ion reducing antioxidant power assay (FRAP), 2,2-diphenylpicrylhydrazyl assay (DPPH), metal chelation assay, nitric oxide (NO), and superoxide (SO) scavenging methods. The quantitative analysis of phytochemicals from EN revealed the presence of tannins, saponins, flavonoids, phenols, and flavonols in considerable amounts. The in vitro antioxidant assay of EN determined that the leaf, stem, latex, and bark have prominent antioxidant potential. The results showed that all the plant parts possessed antioxidant properties which were strongly correlated with the phytoconstituents. From the present study, it can be concluded that the mean content of phytochemicals in the case of EN leaf is greater than the stem, latex, and bark of the plant and this may have contributed to its great antioxidant properties. This may also justify the frequent use of the leaf more than the stem, latex, and bark in the traditional medicinal systems for the cure of bronchial infections, abdominal swellings, inflammation, pain, and tumor.
本研究旨在研究大胡叶、茎、胶乳和树皮的植物化学成分及其抗氧化活性。采用石油醚、苯、氯仿、乙酸乙酯、甲醇和水萃取物的溶剂萃取法。采用分光光度法分别测定标准品、单宁酸、槲皮素、没食子酸和芦丁的总单宁含量、总皂苷含量、总黄酮含量、总酚含量和总黄酮醇含量。采用过氧化氢清除法(H2O2)、铁离子还原抗氧化能力法(FRAP)、2,2-二苯基picrylhydrazyl法(DPPH)、金属螯合法、一氧化氮(NO)和超氧化物(SO)清除法筛选各部位提取物的潜在抗氧化活性。对植物化学成分进行定量分析,发现其中含有大量的单宁、皂苷、类黄酮、酚类和类黄酮醇。体外抗氧化实验表明,其叶、茎、胶乳和树皮具有显著的抗氧化潜力。结果表明,各植物部位均具有抗氧化性能,且抗氧化性能与植物成分密切相关。从目前的研究中可以得出结论,在EN叶的情况下,植物化学物质的平均含量高于植物的茎、乳胶和树皮,这可能是其具有良好抗氧化性能的原因。这也可以证明,在传统的医疗系统中,为了治疗支气管感染、腹部肿胀、炎症、疼痛和肿瘤,经常使用叶子而不是茎、乳胶和树皮。
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引用次数: 9
期刊
Journal of Applied Biology and Biotechnology
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