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Correction to “Cytokinetic Abscission: Phosphoinositides and ESCRTs Direct the Final Cut” 细胞分裂:磷酸肌酸和 ESCRT 指导最后的剪切"。
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-15 DOI: 10.1002/jcb.30626

F. Gulluni, M. Martini, E. Hirsch, “Cytokinetic Abscission: Phosphoinositides and ESCRTs Direct the Final Cut,” Journal of Cellular Biochemistry 118, no. 11 (2017): 3561–3568, https://doi.org/10.1002/jcb.26066.

The authors hereby recognize that in writing the article above, they did not adequately acknowledge the significant contributions of sources [1] and [2], which profoundly influenced the shaping of the content of the article.

The compilation of this review benefited substantially from the insights and research provided by the aforementioned sources and the authors regret any oversight in properly attributing the influence of these sources within the text of their article.

F.Gulluni, M. Martini, E. Hirsch, "Cytokinetic Abscission:磷酸肌酸和 ESCRTs 指导最终切割》,《细胞生物化学杂志》第 118 期,第 11 号(2017 年):3561-3568, https://doi.org/10.1002/jcb.26066.The 作者在此承认,在撰写上述文章时,他们没有充分肯定资料来源[1]和[2]的重要贡献,这些贡献对文章内容的形成产生了深远的影响。本综述的编撰在很大程度上得益于上述资料来源提供的见解和研究,作者对在文章正文中未能正确归因于这些资料来源的影响表示遗憾。
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引用次数: 0
Let‑7f‑5p Regulated by Hsa_circ_0000437 Ameliorates Bleomycin-Induced Skin Fibrosis 由 Hsa_circ_0000437 调控的 Let-7f-5p 可改善博莱霉素诱导的皮肤纤维化。
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-14 DOI: 10.1002/jcb.30629
Baiting Liu, Chenxi Li, Yunyao Bo, Guiping Tian, Lijun Yang, Jianjun Si, Lin Zhang, Yuan Yan

The current treatment of skin fibrosis is limited in its effectiveness due to a lack of understanding of the underlying mechanisms. Previous research has shown a connection between microRNAs (miRNAs) and the development of skin fibrosis. Therefore, investigating miRNA for the treatment of skin fibrotic diseases is highly important and merits further exploration. In this study, we have discovered that let-7f-5p could suppress the proliferation, migration, and expression of collagen type I alpha 1 (COL1A1) in human dermal fibroblasts (HDFs). It was further determined that let-7f-5p could target thrombospondin-1 (THBS1), thereby inhibiting the TGF-β2/Smad3 signaling pathway and exerting its biological effects. Additionally, let-7f-5p is regulated by Hsa_circ_0000437, which acts as a sponge molecule for let-7f-5p and consequently regulates the biological function of HDFs. Furthermore, our findings indicate that in vivo overexpression of let-7f-5p leads to a reduction in dermal thickness and COL1A1 expression, effectively inhibiting the progression of bleomycin (BLM)-induced skin fibrosis in mice. Hence, our research enhances the comprehension of the Hsa_circ_0000437/let-7f-5p/THBS1/TGF-β2/Smad3 regulatory network, highlighting the potential of let-7f-5p as a therapeutic approach for the treatment of skin fibrosis.

由于缺乏对潜在机制的了解,目前治疗皮肤纤维化的效果有限。以往的研究表明,微小核糖核酸(miRNA)与皮肤纤维化的发展之间存在联系。因此,研究用于治疗皮肤纤维化疾病的 miRNA 非常重要,值得进一步探索。本研究发现,let-7f-5p 可抑制人真皮成纤维细胞(HDFs)的增殖、迁移和胶原 I 型α1(COL1A1)的表达。研究进一步确定,let-7f-5p 可靶向凝血酶原-1(THBS1),从而抑制 TGF-β2/Smad3 信号通路并发挥其生物效应。此外,let-7f-5p 还受 Hsa_circ_0000437 的调控,Hsa_circ_0000437 是 let-7f-5p 的海绵分子,从而调控 HDFs 的生物功能。此外,我们的研究结果表明,体内过表达 let-7f-5p 会导致真皮厚度和 COL1A1 表达的减少,从而有效抑制博莱霉素(BLM)诱导的小鼠皮肤纤维化的进展。因此,我们的研究加深了对Hsa_circ_0000437/let-7f-5p/THBS1/TGF-β2/Smad3调控网络的理解,凸显了let-7f-5p作为一种治疗方法治疗皮肤纤维化的潜力。
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引用次数: 0
SARS-CoV-2 Spike Protein Induces Time-Dependent CTSL Upregulation in HeLa Cells and Alveolarspheres SARS-CoV-2 Spike 蛋白在 HeLa 细胞和肺泡球中诱导时间依赖性 CTSL 上调
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-07 DOI: 10.1002/jcb.30627
Magdalena M. Bolsinger, Alice Drobny, Sibylle Wilfling, Stephanie Reischl, Florian Krach, Raul Moritz, Denise Balta, Ute Hehr, Elisabeth Sock, Florian Bleibaum, Frank Hanses, Beate Winner, Susy Prieto Huarcaya, Philipp Arnold, Friederike Zunke

Autophagy and lysosomal pathways are involved in the cell entry of SARS-CoV-2 virus. To infect the host cell, the spike protein of SARS-CoV-2 binds to the cell surface receptor angiotensin-converting enzyme 2 (ACE2). To allow the fusion of the viral envelope with the host cell membrane, the spike protein has to be cleaved. One possible mechanism is the endocytosis of the SARS-CoV-2–ACE2 complex and subsequent cleavage of the spike protein, mainly by the lysosomal protease cathepsin L. However, detailed molecular and dynamic insights into the role of cathepsin L in viral cell entry remain elusive. To address this, HeLa cells and iPSC-derived alveolarspheres were treated with recombinant SARS-CoV-2 spike protein, and the changes in mRNA and protein levels of cathepsins L, B, and D were monitored. Additionally, we studied the effect of cathepsin L deficiency on spike protein internalization and investigated the influence of the spike protein on cathepsin L promoters in vitro. Furthermore, we analyzed variants in the genes coding for cathepsin L, B, D, and ACE2 possibly associated with disease progression using data from Regeneron's COVID Results Browser and our own cohort of 173 patients with COVID-19, exhibiting a variant of ACE2 showing significant association with COVID-19 disease progression. Our in vitro studies revealed a significant increase in cathepsin L mRNA and protein levels following exposure to the SARS-CoV-2 spike protein in HeLa cells, accompanied by elevated mRNA levels of cathepsin B and D in alveolarspheres. Moreover, an increase in cathepsin L promoter activity was detected in vitro upon spike protein treatment. Notably, the knockout of cathepsin L resulted in reduced internalization of the spike protein. The study highlights the importance of cathepsin L and lysosomal proteases in the SARS-CoV-2 spike protein internalization and suggests the potential of lysosomal proteases as possible therapeutic targets against COVID-19 and other viral infections.

自噬和溶酶体途径参与了 SARS-CoV-2 病毒进入细胞的过程。为了感染宿主细胞,SARS-CoV-2 的尖峰蛋白与细胞表面受体血管紧张素转换酶 2(ACE2)结合。为了使病毒包膜与宿主细胞膜融合,尖峰蛋白必须被裂解。一种可能的机制是,SARS-CoV-2-ACE2 复合物被内吞,随后尖峰蛋白被裂解,主要是被溶酶体蛋白酶 cathepsin L 裂解。为了解决这个问题,我们用重组 SARS-CoV-2 穗状病毒蛋白处理 HeLa 细胞和源自 iPSC 的肺泡球,并监测螯合蛋白 L、B 和 D 的 mRNA 和蛋白水平的变化。此外,我们还研究了螯合蛋白 L 缺乏对尖峰蛋白内化的影响,并在体外研究了尖峰蛋白对螯合蛋白 L 启动子的影响。此外,我们还利用 Regeneron 的 COVID Results Browser 和我们自己的 173 名 COVID-19 患者队列中的数据,分析了可能与疾病进展相关的 cathepsin L、B、D 和 ACE2 编码基因的变异。我们的体外研究显示,在 HeLa 细胞中暴露于 SARS-CoV-2 穗状病毒后,酪蛋白酶 L mRNA 和蛋白水平显著增加,同时肺泡球中酪蛋白酶 B 和 D 的 mRNA 水平也升高。此外,在体外检测到尖峰蛋白处理后, cathepsin L 启动子活性增加。值得注意的是,螯合蛋白 L 的敲除导致尖峰蛋白的内化减少。该研究强调了酪蛋白酶 L 和溶酶体蛋白酶在 SARS-CoV-2 穗状病毒蛋白内化过程中的重要性,并表明溶酶体蛋白酶有可能成为针对 COVID-19 和其他病毒感染的治疗靶点。
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引用次数: 0
14-3-3 Family of Proteins: Biological Implications, Molecular Interactions, and Potential Intervention in Cancer, Virus and Neurodegeneration Disorders 14-3-3 蛋白家族:生物学意义、分子相互作用以及对癌症、病毒和神经变性疾病的潜在干预。
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-30 DOI: 10.1002/jcb.30624
Zheng Yao Low, Ashley Jia Wen Yip, Alvin Man Lung Chan, Wee Sim Choo

The 14-3-3 family of proteins are highly conserved acidic eukaryotic proteins (25–32 kDa) abundantly present in the body. Through numerous binding partners, the 14-3-3 is responsible for many essential cellular pathways, such as cell cycle regulation and gene transcription control. Hence, its dysregulation has been linked to the onset of critical illnesses such as cancers, neurodegenerative diseases and viral infections. Interestingly, explorative studies have revealed an inverse correlation of 14-3-3 protein in cancer and neurodegenerative diseases, and the direct manipulation of 14-3-3 by virus to enhance infection capacity has dramatically extended its significance. Of these, COVID-19 has been linked to the 14-3-3 proteins by the interference of the SARS-CoV-2 nucleocapsid (N) protein during virion assembly. Given its predisposition towards multiple essential host signalling pathways, it is vital to understand the holistic interactions between the 14-3-3 protein to unravel its potential therapeutic unit in the future. As such, the general structure and properties of the 14-3-3 family of proteins, as well as their known biological functions and implications in cancer, neurodegeneration, and viruses, were covered in this review. Furthermore, the potential therapeutic target of 14-3-3 proteins in the associated diseases was discussed.

14-3-3 蛋白家族是高度保守的酸性真核生物蛋白(25-32 kDa),大量存在于人体中。通过众多结合伙伴,14-3-3 负责许多重要的细胞通路,如细胞周期调节和基因转录控制。因此,14-3-3 的失调与癌症、神经退行性疾病和病毒感染等重大疾病的发病有关。有趣的是,探索性研究发现,14-3-3 蛋白与癌症和神经退行性疾病呈反相关,而病毒直接操纵 14-3-3 蛋白以增强感染能力,则大大扩展了其意义。其中,COVID-19 通过在病毒组装过程中干扰 SARS-CoV-2 核头壳(N)蛋白而与 14-3-3 蛋白联系在一起。鉴于 COVID-19 易与多种重要的宿主信号通路发生作用,因此了解 14-3-3 蛋白之间的整体相互作用对未来揭示其潜在的治疗单元至关重要。因此,本综述涵盖了 14-3-3 蛋白家族的一般结构和特性,以及它们在癌症、神经变性和病毒中的已知生物学功能和影响。此外,还讨论了 14-3-3 蛋白在相关疾病中的潜在治疗目标。
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引用次数: 0
Divergent Biochemical Properties and Disparate Impact of Arrhythmogenic Calmodulin Mutations on Zebrafish Cardiac Function 致心律失常钙调蛋白突变对斑马鱼心脏功能的不同生化特性和不同影响
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-30 DOI: 10.1002/jcb.30619
Sahar I. Da'as, Angelos Thanassoulas, Brian L. Calver, Alaaeldin Saleh, Doua Abdelrahman, Waseem Hasan, Bared Safieh-Garabedian, Iris Kontogianni, Gheyath K. Nasrallah, George Nounesis, F. Anthony Lai, Michail Nomikos

Calmodulin (CaM) is a ubiquitous, small cytosolic calcium (Ca2+)-binding sensor that plays a vital role in many cellular processes by binding and regulating the activity of over 300 protein targets. In cardiac muscle, CaM modulates directly or indirectly the activity of several proteins that play a key role in excitation-contraction coupling (ECC), such as ryanodine receptor type 2 (RyR2), l-type Ca2+ (Cav1.2), sodium (NaV1.5) and potassium (KV7.1) channels. Many recent clinical and genetic studies have reported a series of CaM mutations in patients with life-threatening arrhythmogenic syndromes, such as long QT syndrome (LQTS) and catecholaminergic polymorphic ventricular tachycardia (CPVT). We recently showed that four arrhythmogenic CaM mutations (N98I, D132E, D134H, and Q136P) significantly reduce the binding of CaM to RyR2. Herein, we investigate in vivo functional effects of these CaM mutations on the normal zebrafish embryonic heart function by microinjecting complementary RNA corresponding to CaMN98I, CaMD132E, CaMD134H, and CaMQ136P mutants. Expression of CaMD132E and CaMD134H mutants results in significant reduction of the zebrafish heart rate, mimicking a severe form of human bradycardia, whereas expression of CaMQ136P results in an increased heart rate mimicking human ventricular tachycardia. Moreover, analysis of cardiac ventricular rhythm revealed that the CaMD132E and CaMN98I zebrafish groups display an irregular pattern of heart beating and increased amplitude in comparison to the control groups. Furthermore, circular dichroism spectroscopy experiments using recombinant CaM proteins reveals a decreased structural stability of the four mutants compared to the wild-type CaM protein in the presence of Ca2+. Finally, Ca2+-binding studies indicates that all CaM mutations display reduced CaM Ca2+-binding affinities, with CaMD132E exhibiting the most prominent change. Our data suggest that CaM mutations can trigger different arrhythmogenic phenotypes through multiple and complex molecular mechanisms.

钙调蛋白(CaM)是一种无处不在的小型细胞膜钙(Ca2+)结合传感器,它通过结合和调节 300 多种蛋白质靶标的活性,在许多细胞过程中发挥着重要作用。在心肌中,CaM 直接或间接地调节在兴奋-收缩耦联(ECC)中发挥关键作用的几种蛋白质的活性,如雷诺丁受体 2 型(RyR2)、l 型 Ca2+ 通道(Cav1.2)、钠通道(NaV1.5)和钾通道(KV7.1)。最近的许多临床和遗传研究报告了一系列CaM突变在危及生命的致心律失常综合征(如长QT综合征(LQTS)和儿茶酚胺能多形性室性心动过速(CPVT))患者中的应用。我们最近发现,四种致心律失常的 CaM 突变(N98I、D132E、D134H 和 Q136P)会显著减少 CaM 与 RyR2 的结合。在此,我们通过显微注射与 CaMN98I、CaMD132E、CaMD134H 和 CaMQ136P 突变体相对应的互补 RNA,研究这些 CaM 突变对斑马鱼胚胎正常心脏功能的体内功能影响。表达 CaMD132E 和 CaMD134H 突变体会导致斑马鱼心率显著下降,模拟人类心动过缓的严重形式,而表达 CaMQ136P 则会导致心率上升,模拟人类室性心动过速。此外,对心室节律的分析表明,与对照组相比,CaMD132E 和 CaMN98I 斑马鱼组显示出不规则的心脏跳动模式和增大的振幅。此外,利用重组 CaM 蛋白进行的圆二色性光谱实验显示,与野生型 CaM 蛋白相比,这四种突变体在 Ca2+ 存在时的结构稳定性降低。最后,Ca2+ 结合研究表明,所有 CaM 突变体都显示出 CaM Ca2+ 结合亲和力降低,其中 CaMD132E 的变化最为显著。我们的数据表明,CaM 突变可通过多种复杂的分子机制引发不同的致心律失常表型。
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引用次数: 0
The Prognostic Biomarker RAB7A Promotes Growth and Metastasis of Liver Cancer Cells by Regulating Glycolysis and YAP1 Activation 预后生物标志物RAB7A通过调节糖酵解和YAP1活化促进肝癌细胞的生长和转移
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-26 DOI: 10.1002/jcb.30621
Jun-Yuan Zhang, Xilin Zhu, Ying Liu, Xiaopan Wu

Activating transcription factor 6 (ATF6) and its downstream genes are involved in progression of hepatocellular carcinoma (HCC). Herein, we demonstrated that sulfhydration of Ras-related protein Rab-7a (RAB7A) was regulated by ATF6. High expression of RAB7A indicated poor prognosis of HCC patients. RAB7A overexpression contributed to proliferation, colony formation, migration, and invasion of HepG2 and Hep3B cells. Furthermore, we found that RAB7A enhanced aerobic glycolysis in HepG2 cells, indicating a higher degree of tumor malignancy. Mechanistically, RAB7A suppressed Yes-associated protein 1 (YAP1) binding to 14-3-3 and conduced to YAP1 nuclear translocation and activation, promoting its downstream gene expression, thereby promoting growth and metastasis of liver cancer cells. In addition, knocking down RAB7A attenuated the progression of orthotopic liver tumors in mice. These findings illustrate the important role of RAB7A in regulating HCC progression. Thus, RAB7A may be a potential innovative target for HCC treatment.

激活转录因子 6(ATF6)及其下游基因参与了肝细胞癌(HCC)的进展。在此,我们证实了 Ras 相关蛋白 Rab-7a (RAB7A)的硫氢化受 ATF6 的调控。RAB7A 的高表达预示着 HCC 患者的不良预后。RAB7A 过表达有助于 HepG2 和 Hep3B 细胞的增殖、集落形成、迁移和侵袭。此外,我们还发现 RAB7A 增强了 HepG2 细胞的有氧糖酵解,这表明肿瘤的恶性程度更高。从机理上讲,RAB7A抑制了Yes相关蛋白1(YAP1)与14-3-3的结合,并导致YAP1核转位和活化,促进其下游基因的表达,从而促进肝癌细胞的生长和转移。此外,敲除 RAB7A 可减轻小鼠正位肝肿瘤的进展。这些发现说明了 RAB7A 在调控 HCC 进展中的重要作用。因此,RAB7A 可能是治疗 HCC 的潜在创新靶点。
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引用次数: 0
The Role and Clinical Relevance of Glycolysis-Associated Genes on Immune Infiltration in Hepatocellular Carcinoma 糖酵解相关基因对肝细胞癌免疫渗透的作用及临床意义
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-25 DOI: 10.1002/jcb.30620
Jing Li, Peng Su, Ting Li, Yang Hao, Tianjun Wang, Lei Fu, Xin Liu

Hepatocellular carcinoma (HCC) poses a significant challenge with dismal survival rates, necessitating a deeper understanding of its molecular mechanisms and the development of improved therapies. Metabolic reprogramming, particularly heightened glycolysis, plays a crucial role in HCC progression. Glycolysis-associated genes (GAGs) emerge as key players in HCC pathogenesis, influencing the tumor microenvironment and immune responses. This study aims to investigate the intricate interplay between GAGs and the immune landscape within HCC, offering valuable insights into potential prognostic markers and therapeutic targets to enhance treatment strategies and patient outcomes. Through the exploration of GAGs, we have identified two distinct molecular glycolytic subtypes in HCC patients, each exhibiting significant differences in both the immune microenvironment and prognosis. A risk model comprising five key GAGs was formulated and subsequently evaluated for their predictive accuracy. Our findings underscore the diverse tumor microenvironment and immune responses associated with the varying glycolytic subtypes observed in HCC. The identified key GAGs hold promise as prognostic indicators for evaluating HCC risk levels, predicting patient outcomes, and guiding clinical treatment decisions, particularly in the context of anticipating responses to immunotherapy drugs.

肝细胞癌(HCC)的存活率很低,是一项重大挑战,因此有必要加深对其分子机制的了解,并开发出更好的疗法。代谢重编程,尤其是糖酵解的增加,在 HCC 的进展中起着至关重要的作用。糖酵解相关基因(GAGs)在 HCC 发病机制中扮演着关键角色,影响着肿瘤微环境和免疫反应。本研究旨在探究 GAGs 与 HCC 内部免疫环境之间错综复杂的相互作用,为潜在的预后标志物和治疗靶点提供有价值的见解,从而改善治疗策略和患者预后。通过对 GAGs 的研究,我们在 HCC 患者中发现了两种不同的分子糖代谢亚型,每种亚型在免疫微环境和预后方面都有显著差异。我们建立了一个由五个关键 GAGs 组成的风险模型,并随后对其预测准确性进行了评估。我们的研究结果表明,不同的肿瘤微环境和免疫反应与 HCC 中观察到的不同糖代谢亚型有关。已确定的关键 GAGs 有望成为评估 HCC 风险水平、预测患者预后和指导临床治疗决策的预后指标,尤其是在预测对免疫疗法药物的反应方面。
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引用次数: 0
Investigating the Involvement of C−X−C Motif Chemokine 5 and P2X7 Purinoceptor in Ectopic Calcification in Mouse Models of Duchenne Muscular Dystrophy 研究 C-X-C Motif Chemokine 5 和 P2X7 Purinoceptor 在杜氏肌肉萎缩症小鼠模型异位钙化中的参与作用
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-25 DOI: 10.1002/jcb.30617
Robin M. H. Rumney, Joanna Pomeroy, Dariusz C. Górecki

Ectopic calcification of myofibers is an early pathogenic feature in patients and animal models of Duchenne muscular dystrophy (DMD). In previous studies using the Dmdmdx-βgeo mouse model, we found that the dystrophin-null phenotype exacerbates this abnormality and that mineralised myofibers are surrounded by macrophages. Furthermore, the P2X7 purinoceptor, functioning in immune cells offers protection against dystrophic calcification. In the present study, by exploring transcriptomic data from Dmdmdx mice, we hypothesised these effects to be mediated by C−X−C motif chemokine 5 (CXCL5) downstream of P2X7 activation. We found that CXCL5 is upregulated in the quadriceps muscles of Dmdmdx-βgeo mice compared to wild-type controls. In contrast, at the cell level, dystrophic (SC5) skeletal muscle cells secreted less CXCL5 chemokine than wild-type (IMO) controls. Although release from IMO cells was increased by P2X7 activation, this could not explain the elevated CXCL5 levels observed in dystrophic muscle tissue. Instead, we found that CXCL5 is released by dystrophin-null macrophages in response to P2X7 activation, suggesting that macrophages are the source of CXCL5 in dystrophic muscles. The effects of CXCL5 upon mineralisation were investigated using the Alizarin Red assay to quantify calcium deposition in vitro. In basal (low phosphate) media, CXCL5 increased calcification in IMO but not SC5 myoblasts. However, in cultures treated in high phosphate media, to mimic dysregulated phosphate metabolism occurring in DMD, CXCL5 decreased calcification in both IMO and SC5 cells. These data indicate that CXCL5 is part of a homoeostatic mechanism regulating intracellular calcium, that CXCL5 can be released by macrophages in response to the extracellular ATP damage-associated signal, and that CXCL5 can be part of a damage response to protect against ectopic calcification. This mechanism is affected by DMD gene mutations.

肌纤维异位钙化是杜氏肌营养不良症(DMD)患者和动物模型的早期致病特征。在之前使用 Dmdmdx-βgeo 小鼠模型进行的研究中,我们发现肌营养不良蛋白缺失表型会加剧这种异常,而且矿化的肌纤维被巨噬细胞包围。此外,免疫细胞中的 P2X7 嘌呤受体可防止肌营养不良性钙化。在本研究中,通过探索 Dmdmdx 小鼠的转录组数据,我们假设这些效应是由 P2X7 激活下游的 C-X-C motif 趋化因子 5(CXCL5)介导的。我们发现,与野生型对照组相比,CXCL5 在 Dmdmdx-βgeo 小鼠股四头肌中上调。相反,在细胞水平上,肌营养不良(SC5)骨骼肌细胞分泌的 CXCL5 趋化因子少于野生型(IMO)对照组。虽然 P2X7 激活会增加 IMO 细胞的释放,但这并不能解释肌营养不良症肌肉组织中 CXCL5 水平升高的原因。相反,我们发现,在 P2X7 激活时,肌营养不良蛋白无效巨噬细胞会释放 CXCL5,这表明巨噬细胞是肌营养不良肌肉中 CXCL5 的来源。CXCL5 对矿化的影响是通过茜素红测定法来量化体外钙沉积的。在基础(低磷酸盐)培养基中,CXCL5 增加了 IMO 肌细胞的钙化,但没有增加 SC5 肌细胞的钙化。然而,在高磷酸盐培养基中,为了模拟 DMD 中发生的磷酸盐代谢紊乱,CXCL5 可减少 IMO 和 SC5 细胞的钙化。这些数据表明,CXCL5 是调节细胞内钙的平衡机制的一部分,巨噬细胞可释放 CXCL5 以响应细胞外 ATP 损伤相关信号,而 CXCL5 可作为损伤响应的一部分,以防止异位钙化。这一机制受到 DMD 基因突变的影响。
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引用次数: 0
Network-Based Transcriptome Analysis Reveals FAM3C as a Novel Potential Biomarker for Glioblastoma 基于网络的转录组分析发现 FAM3C 是胶质母细胞瘤的新型潜在生物标记物
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-25 DOI: 10.1002/jcb.30612
Pablo Shimaoka Chagas, Henrique Izumi Shimaoka Chagas, Sahar Emami Naeini, Bidhan Bhandari, Jules Gouron, Tathiane M. Malta, Évila Lopes Salles, Lei P. Wang, Jack C. Yu, Babak Baban

Glioblastoma (GBM) is the most common form of malignant primary brain tumor with a high mortality rate. The aim of the present study was to investigate the clinical significance of Family with Sequence Similarity 3, Member C, FAM3C, in GBM using bioinformatic-integrated analysis. First, we performed the transcriptomic integration analysis to assess the expression profile of FAM3C in GBM using several data sets (RNA-sequencing and scRNA-sequencing), which were obtained from TCGA and GEO databases. By using the STRING platform, we investigated FAM3C-coregulated genes to construct the protein–protein interaction network. Next, Metascape, Enrichr, and CIBERSORT databases were used. We found FAM3C high expression in GBM with poor survival rates. Further, we observed, via FAM3C coexpression network analysis, that FAM3C plays key roles in several hallmarks of cancer. Surprisingly, we also highlighted five FAM3C‑coregulated genes overexpressed in GBM. Specifically, we demonstrated the association between the high expression of FAM3C and the abundance of the different immune cells, which may markedly worsen GBM prognosis. For the first time, our findings suggest that FAM3C not only can be a new emerging biomarker with promising therapeutic values to GBM patients but also gave a new insight into a potential resource for future GBM studies.

胶质母细胞瘤(GBM)是最常见的恶性原发性脑肿瘤,死亡率很高。本研究的目的是利用生物信息学整合分析,探讨序列相似性3家族成员C(FAM3C)在GBM中的临床意义。首先,我们利用从 TCGA 和 GEO 数据库获得的多个数据集(RNA 序列和 scRNA 序列)进行了转录组整合分析,以评估 FAM3C 在 GBM 中的表达谱。通过使用 STRING 平台,我们研究了 FAM3C 的调控基因,从而构建了蛋白-蛋白相互作用网络。接着,我们使用了 Metascape、Enrichr 和 CIBERSORT 数据库。我们发现 FAM3C 在存活率较低的 GBM 中高表达。此外,我们还通过 FAM3C 共表达网络分析发现,FAM3C 在几种癌症特征中发挥着关键作用。令人惊讶的是,我们还发现了五个 FAM3C 共表达基因在 GBM 中过表达。具体而言,我们证明了 FAM3C 的高表达与不同免疫细胞的丰度之间的关联,这可能会明显恶化 GBM 的预后。我们的研究结果首次表明,FAM3C 不仅可以成为一种新兴的生物标记物,对 GBM 患者有很好的治疗价值,而且还为未来的 GBM 研究提供了一种新的潜在资源。
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引用次数: 0
Prostaglandin F2 Receptor Negative Regulator (PTGFRN) Expression Correlates With a Metastatic-like Phenotype in Epidermoid Carcinoma, Pediatric Medulloblastoma, and Mesothelioma 前列腺素 F2 受体负调节因子 (PTGFRN) 的表达与表皮样癌、小儿髓母细胞瘤和间皮瘤的转移样表型有关。
IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-24 DOI: 10.1002/jcb.30616
Jorge Marquez, Jianping Dong, Jun Hayashi, Ginette Serrero

Prostaglandin F2 receptor negative regulator (PTGFRN) is a transmembrane protein associated with metastatic characteristics of certain cancer types. However, it remains poorly characterized and its direct function in cancer remains unclear. The study presented here aims to further examine whether PTGFRN expression affects a cancer cell's phenotype, as well as metastatic-like characteristics. We used stable shRNA and cDNA transfections to respectively knockdown and overexpress PTGFRN in three different cancer cell lines, two of which are representative of rare and aggressive cancers (Mesothelioma and Pediatric Medulloblastoma). We then examined the characteristics of the resulting clones and showed a decrease in proliferation, migration, colony formation, and spheroid growth capabilities in cells where PTGFRN expression had been inhibited, while cells overexpressing PTGFRN showed the opposite. In addition, we showed that PTGFRN displayed direct binding to two protein partners, Integrin β1 and E. Cadherin, the latter of which is a novel direct binding partner to PTGFRN. Furthermore, silencing PTGFRN expression impacted the cellular process of autophagy, thereby providing another avenue by which PTGFRN potentially contributes to a cancer cell phenotype. Our findings demonstrate the potential role of PTGFRN in cancer metastasis and suggest PTGFRN as a future target for drug development in the treatment of metastatic cancers.

前列腺素 F2 受体负调节因子(PTGFRN)是一种跨膜蛋白,与某些癌症类型的转移特征有关。然而,该蛋白的特性仍不明确,其在癌症中的直接功能也不清楚。本研究旨在进一步探讨 PTGFRN 的表达是否会影响癌细胞的表型以及类似转移的特征。我们使用稳定的 shRNA 和 cDNA 转染技术分别敲除和过表达 PTGFRN 在三种不同的癌细胞系中,其中两种是罕见的侵袭性癌症(间皮瘤和小儿髓母细胞瘤)的代表。我们随后研究了所产生克隆的特征,结果表明抑制了 PTGFRN 表达的细胞的增殖、迁移、集落形成和球状生长能力下降,而过表达 PTGFRN 的细胞则相反。此外,我们还发现 PTGFRN 与两个蛋白伙伴--Integrin β1 和 E. Cadherin 直接结合,后者是 PTGFRN 的新型直接结合伙伴。此外,抑制 PTGFRN 的表达会影响细胞的自噬过程,从而提供了 PTGFRN 可能导致癌细胞表型的另一种途径。我们的研究结果证明了 PTGFRN 在癌症转移中的潜在作用,并建议将 PTGFRN 作为未来治疗转移性癌症的药物开发靶点。
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Journal of cellular biochemistry
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