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RETRACTION: Long Noncoding RNA lnc-ABCA12-3 Promotes Cell Migration, Invasion, and Proliferation by Regulating Fibronectin 1 in Esophageal Squamous Cell Carcinoma 摘要:长链非编码RNA lnc-ABCA12-3通过调节纤维连接蛋白1在食管鳞状细胞癌中促进细胞迁移、侵袭和增殖
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-08 DOI: 10.1002/jcb.70081

RETRACTION: J. Ma, Y. Xiao, B. Tian, S. Chen, B. Zhang, J. Wu, Z. Wu, X. Li, J. Tang, D. Yang, Y. Zhou, H. Wang, M. Su, and W. Wang, “Long Noncoding RNA lnc-ABCA12-3 Promotes Cell Migration, Invasion, and Proliferation by Regulating Fibronectin 1 in Esophageal Squamous Cell Carcinoma,” Journal of Cellular Biochemistry 121, no. 2 (2020): 1374–1387, https://doi.org/10.1002/jcb.29373.

The above article, published online on 12 September 2019 in Wiley Online Library (wileyonlinelibrary.com), has been retracted by agreement between the authors; the journal Editor-in-Chief, Christian Behl; and Wiley Periodicals LLC. The retraction has been agreed due to concerns raised by third parties. Specifically, several instances of image duplication within and across Figures 3B and 7 C have been detected. The clarification and materials provided by the authors upon request did not address the concerns. Accordingly, the article is retracted as the editors have lost confidence in the integrity and accuracy of the whole body of data presented in the article and consider its conclusions invalid.

引用本文:马建军,肖彦,田斌,陈淑娟,张斌,吴建军,吴志杰,李晓霞,唐建军,杨德东,周勇,王红红,苏明,王伟,“长链非编码RNA lnc-ABCA12-3通过调控纤维连接蛋白1促进食管癌细胞迁移、侵袭和增殖”,《细胞生物化学》,第21期,no。2 (2020): 1374-1387, https://doi.org/10.1002/jcb.29373.The上述文章于2019年9月12日在线发表于Wiley online Library (wileyonlinelibrary.com),经作者同意撤回;杂志主编克里斯蒂安·贝尔;和Wiley期刊有限责任公司。由于第三方提出的担忧,已同意撤回。具体来说,在图3B和图7c内和图7c之间检测到几个图像重复的实例。提交人应要求所作的澄清和提供的材料没有解决这些问题。因此,由于编辑对文章中提供的整个数据的完整性和准确性失去信心,并认为其结论无效,因此文章被撤回。
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引用次数: 0
New Insights Into the Role of Polo-Like Kinase 3 in Lung Tumorigenesis polo样激酶3在肺肿瘤发生中的作用的新认识。
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-05 DOI: 10.1002/jcb.70084
Cen Li, Arko Samad, Casey Ostrowski, S. M. Shafiqul Alam, Changhong Yin, Selvaraj Ayyamperumal, Jinjin Chen, Minghao Zhong, Weihua Huang, Yinsheng Wang, Humayun K. Islam, John L. Phillips, Marietta Y. W. T. Lee, Dazhong Xu

Polo-like kinase 3 (PLK3) plays major roles in cell cycle regulation, DNA repair, and cellular responses to hypoxia. Our prior studies demonstrated that PLK3 negatively regulates the hypoxic response by directly phosphorylating and destabilizing HIF-1α and by destabilizing the E3 ubiquitin ligase SIAH2. We also find that PLK3 stabilizes PTEN by direct phosphorylation. Plk3 knockout mice exhibit increased spontaneous tumorigenesis in multiple organs, particularly the lung, at an advanced age. Tumors from these mice tend to be highly vascularized, consistent with the function of PLK3 in the hypoxic response. However, another study only observed increased tumorigenesis in female Plk3 knockout mice. The present study further explored the role of PLK3 in lung tumorigenesis. We find that PLK3 can phosphorylate SIAH2 in vitro, confirming our hypothesis that PLK3 regulates SIAH2 by direct phosphorylation. We detected a negative correlation between the levels of PLK3 and SIAH2 and a positive correlation between HIF-1α and SIAH2 in both human lung adenocarcinoma and squamous cell carcinoma. We observed an increase in lung tumorigenesis in Plk3 knockout mice in the A/J strain background. Our RNA-Seq analysis revealed significantly increased expression of genes involved in oncogenic pathways and the immune response in lung tumors from Plk3 knockout mice. Finally, we find that induced systemic SIAH2 expression promotes CD8 T cell infiltration into subcutaneous tumors in a syngeneic mouse model. Our work further supports the tumor suppressive role of PLK3 in lung cancer and discovered a novel involvement of PLK3 in the regulation of the immune microenvironment of lung tumors.

polo样激酶3 (PLK3)在细胞周期调节、DNA修复和细胞缺氧反应中起重要作用。我们之前的研究表明,PLK3通过直接磷酸化和破坏HIF-1α和破坏E3泛素连接酶SIAH2来负性调节缺氧反应。我们还发现PLK3通过直接磷酸化来稳定PTEN。Plk3基因敲除小鼠在老年时多器官自发性肿瘤发生增加,尤其是肺。来自这些小鼠的肿瘤往往是高度血管化的,与PLK3在缺氧反应中的功能一致。然而,另一项研究仅观察到雌性Plk3敲除小鼠的肿瘤发生增加。本研究进一步探讨了PLK3在肺肿瘤发生中的作用。我们发现PLK3可以在体外磷酸化SIAH2,证实了我们的假设,即PLK3通过直接磷酸化来调节SIAH2。我们发现PLK3和SIAH2在人肺腺癌和鳞状细胞癌中呈负相关,HIF-1α和SIAH2呈正相关。我们观察到在A/J菌株背景下Plk3敲除小鼠的肺肿瘤发生增加。我们的RNA-Seq分析显示,在Plk3基因敲除小鼠的肺肿瘤中,参与致癌途径和免疫反应的基因表达显著增加。最后,我们发现在同基因小鼠模型中,诱导的全身SIAH2表达促进CD8 T细胞浸润到皮下肿瘤。我们的工作进一步支持了PLK3在肺癌中的肿瘤抑制作用,并发现了PLK3参与肺肿瘤免疫微环境调节的新途径。
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引用次数: 0
Structural and Functional Insights Into Lyn Kinase: From Immune Regulation to Therapeutic Targeting 林恩激酶的结构和功能:从免疫调节到治疗靶向。
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-27 DOI: 10.1002/jcb.70082
Alisha Khan, Aaliya Taiyab, Gulam Mustafa Hasan, Saima Wajid, Md. Imtaiyaz Hassan

Lyn kinase, a member of the Src family of kinases, is a critical regulator of immune cell signaling, regulating key processes including activation, proliferation, survival, and apoptosis. Dysregulated Lyn kinase activity causes haematological malignancies, autoimmune disorders, solid tumors, neurodegenerative, cardiovascular, and metabolic disorders. Here, we aimed to provide a comprehensive account of Lyn kinase biology, highlighting its structural features, regulatory roles in immune and cellular signaling, and pathological implications across diseases, including cancers, neurodegenerative disorders, autoimmune diseases, and metabolic disorders. We further examined emerging therapeutic strategies, including small-molecule inhibitors, monoclonal antibodies, and natural compounds, and highlighted the therapeutic potential of Lyn kinase as a promising drug target. Overexpression of Lyn contributes to tumor growth, metastasis, and resistance to treatment in leukaemia, prostate, breast, lung, and pancreatic cancers. Beyond oncology, emerging evidence links Lyn kinase to neuroinflammation, synaptic dysfunction, and metabolic regulation, further underscoring its broad disease relevance. Lyn kinase is considered a viable therapeutic target, with ongoing research focusing on small-molecule inhibitors, monoclonal antibodies, and natural compounds like flavonoids and polyphenols that have exhibited promising preclinical and clinical outcomes. We summarized current insights into Lyn kinase biology, highlighting its pathological significance and discussing therapeutic opportunities arising from the modulation of this enzyme.

Lyn激酶是Src激酶家族的一员,是免疫细胞信号传导的关键调节因子,调节包括激活、增殖、存活和凋亡在内的关键过程。Lyn激酶活性失调导致血液恶性肿瘤、自身免疫性疾病、实体瘤、神经退行性疾病、心血管疾病和代谢紊乱。在这里,我们的目的是提供一个全面的Lyn激酶生物学,突出其结构特征,在免疫和细胞信号传导中的调节作用,以及疾病的病理意义,包括癌症,神经退行性疾病,自身免疫性疾病和代谢紊乱。我们进一步研究了新兴的治疗策略,包括小分子抑制剂、单克隆抗体和天然化合物,并强调了Lyn激酶作为一个有希望的药物靶点的治疗潜力。Lyn的过度表达有助于白血病、前列腺癌、乳腺癌、肺癌和胰腺癌的肿瘤生长、转移和对治疗的抵抗。除了肿瘤学,新出现的证据将Lyn激酶与神经炎症、突触功能障碍和代谢调节联系起来,进一步强调了其广泛的疾病相关性。Lyn激酶被认为是一种可行的治疗靶点,目前正在进行的研究主要集中在小分子抑制剂、单克隆抗体和类黄酮和多酚等天然化合物上,这些化合物在临床前和临床结果都很有希望。我们总结了目前对Lyn激酶生物学的见解,强调了它的病理意义,并讨论了这种酶的调节所带来的治疗机会。
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引用次数: 0
HEPES in Cell Culture Alters the Multi-Omics Profile Exhibited by Gaucher Disease Fibroblasts 细胞培养中的HEPES改变了戈谢病成纤维细胞的多组学特征。
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-16 DOI: 10.1002/jcb.70080
Eleonore M. Corazolla, Bauke V. Schomakers, Maria M. Trętowicz, Jill Hermans, Michel van Weeghel, Frédéric M. Vaz, Mia L. Pras-Raves, Karen Ghauharali-van der Vlugt, Femke S. Beers-Stet, Susanna M. I. Goorden, Judith Jansen-Meijer, Georges E. Janssens, Carla E. M. Hollak, Riekelt H. Houtkooper, André B. P. van Kuilenburg

Lysosomal function can be affected by components in cell culture. This in turn may influence cellular metabolism and, consequently, research and diagnostics outcomes. One such component is the commonly used pH buffer 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES). HEPES specifically impacts the trafficking of the lysosomal enzyme glucocerebrosidase, which is deficient in Gaucher disease (GD). Understanding how HEPES affects cellular models of GD is essential, since glucocerebrosidase is central to diagnostic testing and the investigation of GD pathophysiology. Therefore, we examined the broader effects of HEPES on cultured fibroblasts from individuals with GD and healthy controls. We cultured dermal fibroblasts of eight adults with GD and seven healthy age- and sex-matched controls. The cells were cultured in two culture media, Ham's F10 and DMEM, both with and without HEPES. We assessed glucocerebrosidase enzyme activity and sphingolipid concentrations using a quantitative UPLC-MS/MS method. Additionally, we conducted multi-omics analyses, consisting of lipidomics, metabolomics and proteomics, to explore the broader impact of HEPES in cell culture on fibroblasts. Glucocerebrosidase activity in cell lysates increased after HEPES exposure in both GD and control fibroblasts, to an extent that may influence diagnostic outcomes. In GD fibroblasts, substrate accumulation was absent and not altered by HEPES exposure. GD fibroblasts exhibited a multi-omics profile largely overlapping with healthy controls and lacking the typical pathological features associated with GD in other cell types, such as mitochondrial dysfunction, dysregulated autophagy, disruption of intracellular calcium homeostasis, ER stress and chronic oxidative stress. In addition, the multi-omics profile was altered by HEPES, however in a non-specific manner. In conclusion, HEPES influences fibroblasts in culture, both from healthy controls and from patients with GD. Furthermore, GD fibroblasts lack a specific disease-related profile. This renders cultured fibroblasts unsuitable for studying pathophysiological processes in GD. Culturing GD fibroblasts with HEPES may compromise the reliability of diagnostics.

溶酶体功能可受细胞培养成分的影响。这反过来又可能影响细胞代谢,从而影响研究和诊断结果。其中一种成分是常用的pH缓冲液4-(2-羟乙基)-1-哌嗪乙烷磺酸(HEPES)。HEPES特异性影响溶酶体葡萄糖脑苷酶的转运,这是戈谢病(GD)缺乏的。了解HEPES如何影响GD的细胞模型是必要的,因为葡萄糖脑苷酶是诊断测试和GD病理生理学研究的核心。因此,我们研究了HEPES对GD患者和健康对照者培养成纤维细胞的广泛影响。我们培养了8名患有GD的成年人和7名年龄和性别匹配的健康对照者的皮肤成纤维细胞。细胞分别在含HEPES和不含HEPES的Ham’s F10和DMEM两种培养基中培养。我们使用定量UPLC-MS/MS方法评估葡萄糖脑苷酶活性和鞘脂浓度。此外,我们进行了多组学分析,包括脂质组学、代谢组学和蛋白质组学,以探索HEPES在细胞培养中对成纤维细胞的广泛影响。GD和对照成纤维细胞暴露于HEPES后,细胞裂解物中葡萄糖脑苷酶活性增加,其程度可能影响诊断结果。在GD成纤维细胞中,底物积累不存在,并且不受HEPES暴露的影响。GD成纤维细胞的多组学特征在很大程度上与健康对照重叠,缺乏其他细胞类型中与GD相关的典型病理特征,如线粒体功能障碍、自噬失调、细胞内钙稳态破坏、内质网应激和慢性氧化应激。此外,HEPES以非特异性的方式改变了多组学特征。总之,HEPES影响培养的成纤维细胞,无论是健康对照还是GD患者。此外,GD成纤维细胞缺乏特定的疾病相关特征。这使得培养成纤维细胞不适合研究GD的病理生理过程。用HEPES培养GD成纤维细胞可能会降低诊断的可靠性。
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引用次数: 0
SPI1 Regulates Autophagy by Promoting ATG7 Transcription to Enhance Ferroptosis in Myocardial Ischemia/Reperfusion Injury SPI1在心肌缺血/再灌注损伤中通过促进ATG7转录调控自噬,促进铁下沉
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-09 DOI: 10.1002/jcb.70078
Wu-lin Li, Xiao Han, Wei-long Pan, Hui Wang, Da-li You, Xian-ting Chen, Xiao Wu, Ming-ming Jin, Fei Wang

Myocardial ischemia/reperfusion injury (MIRI) commonly arises during medical procedures for coronary artery disease (CAD), a global health issue. Inhibiting autophagy-dependent ferroptosis has emerged as an effective strategy for MIRI treatment, yet its precise mechanisms warrant further exploration. A murine model of myocardial ischemia/reperfusion (I/R) was employed, and cardiac myocytes were subjected to hypoxia/reoxygenation (H/R). Myocardial tissue alterations were assessed using Evans blue/TTC staining, HE staining, and TUNEL assays. An automated biochemical analyzer was used to quantify serum creatine kinase (CK) and lactate dehydrogenase (LDH) levels. Myocardial cell viability was evaluated using Cell Counting Kit-8 (CCK-8) assays. The interaction of the ATG7 promoter with SPI1 was explored through ChIP experiments. The expression levels of autophagy markers (Beclin-1, LC3The expr, ATG7, and SPI1 were assessed via immunohistochemistry, immunofluorescence, quantitative real-time polymerase chain reaction (qRT-PCR), and western blot analysis. Various indicators, including LDH, ROS, MDA, Fe2 + , GSH, GPx4, and FTH1, were measured to characterize the ferroptosis process. In MIRI model mice, autophagy-dependent ferroptosis clearly occurred, and ATG7 expression was elevated. ATG7 knockdown effectively alleviated MIRI and inhibited autophagy-induced ferroptosis. SPI1 was identified as a key regulator in this process. SPI1 bound to the ATG7 promoter region, enhancing ATG7 transcription during myocardial I/R and thereby modulating both ferroptosis and autophagy. SPI1 knockdown inhibited ferroptosis and alleviated MIRI by suppressing autophagy. The results of our study revealed that SPI1 promoted ATG7 transcription, exacerbating ferroptosis in MIRI. These findings suggest that therapeutic strategies targeting ferroptosis and autophagy may mitigate cardiovascular diseases in MIRI.

心肌缺血/再灌注损伤(MIRI)通常出现在冠状动脉疾病(CAD)的医疗过程中,这是一个全球性的健康问题。抑制自噬依赖性铁下垂已成为MIRI治疗的有效策略,但其确切机制有待进一步探索。采用小鼠心肌缺血/再灌注(I/R)模型,心肌细胞缺氧/再氧合(H/R)。采用Evans蓝/TTC染色、HE染色和TUNEL检测评估心肌组织改变。采用全自动生化分析仪定量测定血清肌酸激酶(CK)和乳酸脱氢酶(LDH)水平。采用细胞计数试剂盒-8 (CCK-8)检测心肌细胞活力。通过ChIP实验探索ATG7启动子与SPI1的相互作用。采用免疫组织化学、免疫荧光、定量实时聚合酶链式反应(qRT-PCR)和western blot分析自噬标志物Beclin-1、lc3、expr、ATG7和SPI1的表达水平。通过测定LDH、ROS、MDA、Fe2 +、GSH、GPx4、FTH1等指标来表征铁下垂过程。MIRI模型小鼠明显出现自噬依赖性铁下垂,ATG7表达升高。ATG7下调可有效缓解MIRI,抑制自噬诱导的铁下垂。SPI1被认为是这一过程中的关键调控因子。SPI1结合ATG7启动子区,在心肌I/R期间增强ATG7转录,从而调节铁下垂和自噬。SPI1敲低抑制铁下垂,通过抑制自噬减轻MIRI。我们的研究结果表明,SPI1促进ATG7转录,加剧了MIRI中的铁下垂。这些发现提示针对铁下垂和自噬的治疗策略可能减轻MIRI中的心血管疾病。
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引用次数: 0
Integrative Multi-Omics Analysis Unveils the Molecular Mechanisms by Which TP53 Mutation Influence Early Decitabine Resistance in Myelodysplastic Syndrome 综合多组学分析揭示TP53突变影响骨髓增生异常综合征早期地西他滨耐药的分子机制
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-09 DOI: 10.1002/jcb.70076
Wei Chen, Xiaojing Ge, Hailing Xu, Tong Yang, Xiuying Wu, Jinting An, Yuye Ren, Lan Zhang

The myelodysplastic syndrome (MDS) is group of clonal hematopoietic stem cell disorders typified by peripheral cytopenia, dysplastic hematopoietic progenitors, a hypercellular or hypocellular bone marrow, and a high risk of conversion to acute myeloid leukemia. TP53 is a tumor suppressor gene that plays an important role in tumor suppression. Decitabine (DAC) monotherapy has been shown to improve the response rates in TP53-mutated MDS, while the molecular mechanisms of clinical responses are unclear. This study aimed to initially evaluate the TP53 gene locus mutation and the regulation mechanism of DAC on gene expression in AML-MDS cell lines. We detected the mutation of TP53 gene locus in three myeloid tumor cell lines, SKM-1 (mutTP53), M-07e (wtTP53) and HL60 (nullTP53). Then, we performed transcriptomic and proteomic and methylation data in M-07e (wtTP53) and SKM-1 (mutTP53) cells and screened out LGALS1, which is a poor prognostic indicator, as the potential target of TP53 by comparing analysis. We uncovered 31 potential key genes showing differential early responses to DAC treatment in TP53-mutant versus wild-type cells, which may be associated with resistance development. This study revealed the potential molecular mechanisms of TP53 gene locus mutation in DAC-treated MDS.

骨髓增生异常综合征(MDS)是一组克隆性造血干细胞疾病,以外周血细胞减少、造血祖细胞增生异常、骨髓高细胞或低细胞为特征,并具有转化为急性髓系白血病的高风险。TP53是一种肿瘤抑制基因,在肿瘤抑制中起着重要作用。地西他滨(DAC)单药治疗已被证明可提高tp53突变MDS的应答率,但临床应答的分子机制尚不清楚。本研究旨在初步评估AML-MDS细胞系中TP53基因位点突变及DAC对基因表达的调控机制。我们在3株髓系肿瘤细胞系SKM-1 (mutTP53)、M-07e (wtTP53)和HL60 (nullTP53)中检测到TP53基因位点突变。然后,我们对M-07e (wtTP53)和SKM-1 (mutTP53)细胞进行转录组学、蛋白质组学和甲基化数据,通过对比分析筛选出预后不良指标LGALS1作为TP53的潜在靶点。我们发现31个潜在的关键基因在tp53突变型细胞和野生型细胞中对DAC治疗表现出不同的早期反应,这可能与耐药性的发展有关。本研究揭示了dac治疗的MDS中TP53基因位点突变的潜在分子机制。
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引用次数: 0
The Role of Hsp72 in Handing Misfolded Proteins Metabolism in Heat-Stressed Cells: Mechanisms and Hypotheses 热休克蛋白72在处理热应激细胞中错误折叠蛋白代谢中的作用:机制和假设
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-27 DOI: 10.1002/jcb.70075
Yue Guo, Haotian Lan, Haoying Wang, Xiaoyu Sun, Benge Zou, Wei Zhang, Yu Wang, Xiaowei Wang, Chunying Li, Shiyong Zhu, Rongfeng Cao, Kaiqiang Fu

The accumulation of misfolded proteins within cells, often induced by stress, is a major contributor to cellular dysfunction. Heat shock proteins, which serve as critical chaperone molecules in response to stress-related damage, are essential for maintaining protein homeostasis within cells. In this family of proteins, Heat Shock Protein 72 (Hsp72) stands out for its acute responsiveness to thermal stress. It can swiftly be produced in reaction to the surge of misfolded proteins caused by heat, thus maintaining the equilibrium of intracellular protein metabolism. This analysis explores the function of Hsp72 in maintaining protein homeostasis, focusing on its ability to assist in the refolding of incorrectly folded proteins and to guide their breakdown through the ubiquitin-proteasome and autophagy systems. Furthermore, the potential mechanisms through which cells may eliminate misfolded protein aggregates via the secretory autophagy pathway under heat stress conditions are explored. This study systematically analyzes the various mechanisms by which Hsp72 influences misfolded protein metabolism and discusses the relevance of each pathway in the context of heat stress. Integrating findings from prior laboratory research, it is concluded that Hsp72 plays a pivotal role in regulating misfolded protein metabolism through the secretory autophagy pathway, thereby sustaining intracellular protein homeostasis during heat stress. This investigation expands the functional network of Hsp72 in maintaining protein homeostasis and elucidates the molecular pathways involved in its regulation of misfolded protein metabolism under heat stress, providing a framework for future research on Hsp72's role in cellular recovery from heat stress.

细胞内错误折叠蛋白的积累,通常是由压力引起的,是细胞功能障碍的主要原因。热休克蛋白作为应激相关损伤的关键伴侣分子,对维持细胞内蛋白质稳态至关重要。在这个蛋白家族中,热休克蛋白72 (Hsp72)因其对热应激的急性反应而脱颖而出。它可以在热引起的错误折叠蛋白质激增的反应中迅速产生,从而维持细胞内蛋白质代谢的平衡。本分析探讨了Hsp72在维持蛋白质稳态中的功能,重点关注其协助错误折叠蛋白质的再折叠和引导其通过泛素-蛋白酶体和自噬系统分解的能力。此外,我们还探讨了热应激条件下细胞通过分泌性自噬途径消除错误折叠蛋白聚集体的潜在机制。本研究系统分析了Hsp72影响错误折叠蛋白代谢的各种机制,并讨论了每种途径在热应激背景下的相关性。综合前期实验室研究结果,我们认为Hsp72在热应激过程中通过分泌性自噬途径调节错误折叠蛋白代谢,从而维持细胞内蛋白稳态中发挥关键作用。本研究拓展了Hsp72维持蛋白稳态的功能网络,阐明了热应激下Hsp72调节错误折叠蛋白代谢的分子途径,为进一步研究Hsp72在热应激后细胞恢复中的作用提供了框架。
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引用次数: 0
Rescue of Aging-Dependent Reduction of Claudin-10b Expression by Glutamate in Mouse Intestinal MCE301 Cells 谷氨酸对小鼠肠MCE301细胞衰老依赖性Claudin-10b表达的抑制作用
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-26 DOI: 10.1002/jcb.70077
Miki Tanabe, Shunsuke Matsuda, Yuta Yoshino, Yoshiaki Tabuchi, Toshiyuki Matsunaga, Akira Ikari

Paracellular permeability of mineral ions and water in the intestines is restricted by claudins (CLDNs), which are key components of tight junctions (TJs). Glutamate (Glu) plays a role in regulating absorption mechanisms in the intestines, but the effect on paracellular permeability remains unclear. In mouse intestine-derived MCE301 cells, Glu treatment increased the mRNA levels of CLDN10b, while the levels of other CLDNs and zonula occludens-1, a scaffolding protein in TJs, remained unchanged. Similar results were obtained in rat intestine-derived IEC6 cells without CLDN1 and CLDN15. Glu also increased the protein level and TJ localization of CLDN10. The Glu-induced increase in CLDN10b mRNA expression was suppressed by knockdown of taste receptor type 1, T1R1 and T1R3. Glu treatment stimulated Ca2+ influx, which was inhibited by BAPTA, a Ca2+ chelator, and ebselen, a voltage-dependent Ca2+ channel inhibitor. Furthermore, the upregulation of CLDN10b mRNA by Glu was inhibited by BAPTA, ebselen, and rapamycin, an inhibitor of mammalian target of rapamycin (mTOR). These results suggest that Glu upregulates CLDN10b expression in MCE301 cells mediated by a T1R1/T1R3-Ca2+-mTOR signaling pathway. The mRNA levels of CLDN10b were decreased in the colon of aged mice and MCE301 cells treated with tenovin-1 (Ten-1), an inducer of cellular senescence. Glu reversed the Ten-1-induced reduction of CLDN10b mRNA and restored paracellular barrier function. These results suggest that Glu enhances the intestinal paracellular barrier function through the regulation of CLDN10b expression.

肠内矿物质离子和水的细胞旁通透性受到紧密连接(TJs)的关键成分CLDNs的限制。谷氨酸(Glu)在调节肠道吸收机制中起作用,但对细胞旁通透性的影响尚不清楚。在小鼠肠源性MCE301细胞中,Glu处理增加了CLDN10b的mRNA水平,而其他CLDNs和TJs中的一种支架蛋白zonula occludens-1的水平保持不变。在不含CLDN1和CLDN15的大鼠肠源性IEC6细胞中也获得了类似的结果。Glu还增加了CLDN10的蛋白水平和TJ定位。glu诱导的CLDN10b mRNA表达增加可通过敲低味觉受体1型、T1R1和T1R3来抑制。谷氨酸处理刺激Ca2+内流,这是由BAPTA, Ca2+螯合剂和ebselen,电压依赖性Ca2+通道抑制剂抑制。此外,Glu上调CLDN10b mRNA可被BAPTA、依布selen和雷帕霉素(一种哺乳动物雷帕霉素靶蛋白(mTOR)抑制剂)抑制。这些结果表明,Glu上调了T1R1/T1R3-Ca2+-mTOR信号通路介导的MCE301细胞中CLDN10b的表达。衰老小鼠结肠和MCE301细胞中CLDN10b mRNA表达水平在细胞衰老诱导剂tenovin-1 (Ten-1)处理后降低。Glu逆转了ten -1诱导的CLDN10b mRNA的减少,恢复了细胞旁屏障功能。这些结果表明,Glu通过调节CLDN10b的表达增强肠道细胞旁屏障功能。
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引用次数: 0
In Silico Study of Molecular Docking Between Lactoferrin and Autophagy-apoptosis Genes ATG3, ATG5, and ATG12 and In Vitro Study of Lactoferrin Effect on These Gene Expressions in Breast Cancer 乳铁蛋白与自噬-凋亡基因ATG3、ATG5、ATG12分子对接的硅晶实验研究及乳铁蛋白对乳腺癌中这些基因表达的影响
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-26 DOI: 10.1002/jcb.70072
Seyedeh Fatemeh Noorani, Fatemeh Moradian, Havva Mehralitabar, Mohammed Kuddus

Cancer is a major global health problem. Considering the special role of lactoferrin (Lf) in inhibiting the growth of cancer cells, a new approach has emerged for cancer treatment. The present study aimed to investigate the effect of Lf on the expression level of autophagy-apoptotic genes ATG5, ATG3, and ATG12 in breast cancer cell line MCF7 and an in silico study of the interaction between lactoferrin and the promoter of these genes and their proteins. The survival percentage of MCF7 cells in concentrations of 200, 300, and 500 µg was 94.4%, 91.64%, and 52%, respectively. The expression level of the ATG3 gene in treatment with different concentrations of Lf was increased, but for the ATG5 gene, it decreased. The expression level of the ATG12 gene in cancer cells treated with Lf concentrations of 200 and 300 µg/ml was increased; however, it decreased at the concentration of 500 μg/ml. All concentrations significantly differed from the control (p < 0.05). The interaction of lactoferrin with ATG3, ATG5, and ATG12 proteins showed that the N-lobe region of the lactoferrin interacted with the N-lobe, catalytic domain, and the HR domain of the ATG3 protein, with the HR domain and the UblB domain of the ATG5 protein, and with the C domain of the ATG12 protein. Analysis of HADDOCK data showed that Lf interacted with the promoter of the genes. Lf, in addition to its effect on the expression of the genes, also interacts with the promoter of genes and their protein.

癌症是一个主要的全球健康问题。考虑到乳铁蛋白(Lf)在抑制癌细胞生长中的特殊作用,一种新的治疗癌症的方法出现了。本研究旨在探讨Lf对乳腺癌细胞系MCF7中自噬凋亡基因ATG5、ATG3和ATG12表达水平的影响,并通过计算机实验研究乳铁蛋白与这些基因启动子及其蛋白的相互作用。MCF7细胞在200、300和500µg浓度下的存活率分别为94.4%、91.64%和52%。不同浓度Lf处理下,ATG3基因表达量升高,而ATG5基因表达量降低。200µg/ml和300µg/ml的Lf处理后,肿瘤细胞中ATG12基因的表达水平升高;浓度为500 μg/ml时,呈下降趋势。所有浓度均与对照组有显著差异(p < 0.05)。乳铁蛋白与ATG3、ATG5和ATG12蛋白的相互作用表明,乳铁蛋白的n -叶区与ATG3蛋白的n -叶、催化结构域和HR结构域相互作用,与ATG5蛋白的HR结构域和UblB结构域相互作用,与ATG12蛋白的C结构域相互作用。对HADDOCK数据的分析表明,Lf与基因的启动子相互作用。Lf除了影响基因的表达外,还与基因的启动子及其蛋白相互作用。
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引用次数: 0
Potential Mechanisms of Lipid-Soluble Vitamins Alleviate Brain Damage in Preterm Infants: Integration of Network Pharmacology and Molecular Docking 脂溶性维生素减轻早产儿脑损伤的潜在机制:网络药理学与分子对接的整合。
IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-11-24 DOI: 10.1002/jcb.70068
Xiao Li, Li Liu

Vitamin A, E, and other vitamins have been demonstrated to potentially be used in the treatment of brain injury in preterm infants; however, whether all types of vitamins can be utilized for this purpose remains unclear. In this study, we systematically investigated the therapeutic mechanisms of vitamins in preterm infant brain injury using network pharmacology and molecular docking techniques. A total of 23 potential targets for four vitamin components against preterm infant brain injury were identified through public databases. Key genes mediating preterm infant brain injury were obtained via transcriptome analysis of human cells from the GEO database. The intersection of therapeutic targets for brain injury and key genes revealed potential targets for vitamin action in the treatment of preterm infant brain injury. Protein-protein interaction (PPI) analysis identified two key targets (PFKFB3 and PDGFRB). KEGG pathway and GO enrichment analyses elucidated the critical pathways. Molecular docking results indicated that the key targets effectively bind with vitamin components (E and Vitamin K) through hydrogen bonds and hydrophobic interactions. This study theoretically explores the potential mechanisms of vitamin therapy for preterm infant brain injury and provides a preliminary theoretical basis for the development and application of vitamins as potential functional therapeutic agents for preventing brain injury in preterm infants.

维生素A、E和其他维生素已被证明可用于治疗早产儿脑损伤;然而,是否所有类型的维生素都能用于这一目的仍不清楚。本研究采用网络药理学和分子对接技术,系统探讨了维生素对早产儿脑损伤的治疗机制。通过公共数据库确定了四种维生素成分对抗早产儿脑损伤的总共23个潜在目标。通过对GEO数据库中人类细胞的转录组分析,获得了介导早产儿脑损伤的关键基因。脑损伤治疗靶点与关键基因的交叉揭示了维生素在早产儿脑损伤治疗中的潜在靶点。蛋白-蛋白相互作用(PPI)分析确定了两个关键靶点(PFKFB3和PDGFRB)。KEGG途径和GO富集分析阐明了关键途径。分子对接结果表明,关键靶点通过氢键和疏水相互作用与维生素E和维生素K有效结合。本研究从理论上探讨了维生素治疗早产儿脑损伤的潜在机制,为维生素作为预防早产儿脑损伤的潜在功能性治疗剂的开发和应用提供了初步的理论基础。
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引用次数: 0
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Journal of cellular biochemistry
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