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Flexible Trilinearity Alignment (FTA) and Shift Invariant Transformation (SIT) Constraints in Three-Way Multivariate Curve Resolution Data Analysis 三向多元曲线解析数据分析中的灵活三线性对齐(FTA)和位移不变变换(SIT)约束条件
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-08 DOI: 10.1002/cem.3581
Xin Zhang, Romà Tauler

In this work, two alternative ways of analyzing three-way data with multivariate curve resolution alternating least squares (MCR-ALS) using the trilinearity constraint are described and compared. Different synthetic datasets and experimental three-way datasets covering different scenarios are analyzed, and the results obtained are compared. The two new different ways of applying the trilinearity constraint are named flexible trilinearity alignment (FTA) and shift invariant transformation (SIT). The effects of noise in the application of both types of constraints are investigated in detail. Results show that both approaches are particularly adequate for those cases like in gas chromatography and especially in liquid chromatography where the elution profiles of the same chemical component in different chromatographic runs are not totally reproducible because they are time shifted, although they preserve their shape. When strong time shifts and co-elution occur, then the “standard” trilinear model does not work, and alternative approaches should be used, such as the MCR extended bilinear model to multiset (multirun) data, or the proposed relaxation of the trilinearity constraint in the FTA and SIT methods to capture the time drift changes produced in the elution profiles of the resolved components.

在这项工作中,描述并比较了使用三线性约束的多变量曲线分辨率交替最小二乘法(MCR-ALS)分析三向数据的两种替代方法。对涵盖不同场景的不同合成数据集和实验三向数据集进行了分析,并对所得结果进行了比较。应用三线性约束的两种新的不同方法被命名为灵活三线性配准(FTA)和移位不变变换(SIT)。在应用这两种约束时,对噪声的影响进行了详细研究。结果表明,这两种方法都特别适用于气相色谱法,尤其是液相色谱法中同一化学成分在不同色谱运行中的洗脱剖面图虽然形状保持不变,但由于时间偏移而无法完全重现的情况。当发生强烈的时间偏移和共洗脱时,"标准 "三线性模型就不起作用了,此时应采用其他方法,如针对多集(多运行)数据的 MCR 扩展双线性模型,或建议放宽 FTA 和 SIT 方法中的三线性约束,以捕捉已解析组分洗脱剖面中产生的时间漂移变化。
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引用次数: 0
A Novel One-Class Convolutional Autoencoder Combined With Excitation–Emission Matrix Fluorescence Spectroscopy for Authenticity Identification of Food 新型单类卷积自动编码器与激发-发射矩阵荧光光谱技术相结合用于食品真伪鉴别
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-05 DOI: 10.1002/cem.3592
Xiaoqin Yan, Baoshuo Jia, Wanjun Long, Kun Huang, Tong Wang, Hailong Wu, Ruqin Yu

In this work, a novel one-class classification algorithm one-class convolutional autoencoder (OC-CAE) was proposed for the detection of abnormal samples in the excitation–emission matrix (EEM) fluorescence spectra dataset. The OC-CAE used Boxplot to analyze the reconstruction errors and used the LOF algorithm to handle features extracted by the hidden layer in the convolutional autoencoder (CAE). The fused information provides the basis for more accurate pattern recognition, ensures flexibility in model training, and can obtain higher model specificity, which is important in the field of food quality control. To demonstrate the reliability and advantages of OC-CAE, two EEM cases related to the authentication of food including the Zhenjiang aromatic vinegar (ZAV) case and the camellia oil (CAO) case were studied. The results showed that OC-CAE identified all abnormal samples in the two cases, reflecting excellent performance in the detection of abnormal samples, and that it, coupled with EEM, would be an effective tool for the authenticity identification of food.

本研究提出了一种新型的一类分类算法一类卷积自动编码器(OC-CAE),用于检测激发-发射矩阵(EEM)荧光光谱数据集中的异常样本。OC-CAE 使用 Boxplot 分析重构误差,并使用 LOF 算法处理卷积自动编码器 (CAE) 隐藏层提取的特征。融合后的信息为更精确的模式识别提供了基础,确保了模型训练的灵活性,并能获得更高的模型特异性,这在食品质量控制领域非常重要。为了证明 OC-CAE 的可靠性和优势,研究了两个与食品认证相关的 EEM 案例,包括镇江香醋(ZAV)案例和山茶油(CAO)案例。结果表明,OC-CAE 能识别这两个案例中的所有异常样品,在检测异常样品方面表现出色,与 EEM 相结合将成为食品真伪鉴定的有效工具。
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引用次数: 0
Robust Multiplicative Scatter Correction Using Quantile Regression 利用定量回归进行稳健的乘法散点校正
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-05 DOI: 10.1002/cem.3589
Bahram Hemmateenejad, Nabiollah Mobaraki, Knut Baumann

A robust method for multiplicative scatter correction (MSC) in infrared spectroscopy is presented. Using quantile regression, the outlier wavelengths (concentration-dependent wavelengths) that are irrelevant to the regression are identified and therefore excluded from the regression model. This new MCS method, which could be implemented in its simple or extended form, is much simpler than the recently proposed methods and has only one hyperparameter (the quantile value) to be adjusted. To achieve this, a scoring function based on residual analysis can automatically determine the correct quantile value. The method is first explained using simulation data sets and then its validation is explained by analysing some experimental data sets. It was found that our new method can perform well in the presence of strong outlying variables. On the other hand, when the data sets are not associated outlying wavelengths, this method behaves similarly to the conventional MSC method.

本文介绍了一种用于红外光谱乘法散射校正(MSC)的稳健方法。通过使用量子回归,可以识别出与回归无关的离群波长(与浓度相关的波长),从而将其排除在回归模型之外。这种新的 MCS 方法可以以简单或扩展的形式实现,比最近提出的方法简单得多,而且只需调整一个超参数(量值)。为此,基于残差分析的评分函数可以自动确定正确的量化值。首先使用模拟数据集对该方法进行了说明,然后通过分析一些实验数据集对其进行了验证。结果发现,我们的新方法在存在强离群变量的情况下表现良好。另一方面,当数据集与离群波长无关时,这种方法的表现与传统的 MSC 方法类似。
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引用次数: 0
Adjusted Pareto Scaling for Multivariate Calibration Models 多变量校准模型的调整帕累托缩放法
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-03 DOI: 10.1002/cem.3588
Kurt Varmuza, Peter Filzmoser

The performance of multivariate calibration models ŷ = f(x) for the prediction of a numerical property y from a set of x-variables depends on the type of scaling of the x-variables. Common scaling methods are autoscaling (dividing the centered x by its standard deviation s) and Pareto scaling (dividing the centered x by sP with P = 0.5). The adjusted Pareto scaling presented here varies the exponent P between 0 (no scaling) and 1 (autoscaling) with the aim of obtaining an optimum prediction performance for ŷ. Related scaling methods based on the variable spread are range scaling and vast scaling; while level scaling is based on the location (central value) of the variable. These scaling methods and robust versions are compared for models created by partial least-squares (PLS) regression. The applied strategy repeated double cross validation (rdCV) evaluates the model performance for test set objects and considers its variability. Results with three data sets from chemistry show: (a) the efficacy of the different scaling methods depends on the data structure; (b) optimization of the Pareto exponent P is recommended; (c) range scaling or vast scaling may be better than adjusted Pareto scaling; (d) in general a heuristic search for the best scaling method is advisable. Overall, the consideration of different variants of scaling allow for a flexible adjustment of the variable contributions to the calibration model.

多元校准模型 ŷ = f(x)从一组 x 变量预测数值属性 y 的性能取决于 x 变量的缩放类型。常见的缩放方法有自动缩放(将中心 x 除以标准偏差 s)和帕累托缩放(将中心 x 除以 sP,p = 0.5)。本文介绍的调整帕累托缩放法在 0(无缩放)和 1(自动缩放)之间改变指数 P,目的是获得 ŷ 的最佳预测性能。基于变量分布的相关缩放方法有范围缩放和广度缩放;而水平缩放则基于变量的位置(中心值)。通过偏最小二乘(PLS)回归创建的模型,对这些缩放方法和稳健版本进行了比较。所采用的重复双重交叉验证(rdCV)策略可评估测试集对象的模型性能,并考虑其可变性。三个化学数据集的结果表明:(a) 不同缩放方法的效果取决于数据结构;(b) 建议优化帕累托指数 P;(c) 范围缩放或广域缩放可能比调整后的帕累托缩放更好;(d) 一般来说,最好采用启发式搜索最佳缩放方法。总之,考虑不同的缩放变量可以灵活调整校准模型的变量贡献。
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引用次数: 0
Investigation of the Physiological and Post-training Effects of Ecdysteroid Supplementation by Multivariate Analysis of the Human Serum Metabolome 通过人体血清代谢组的多元分析研究补充蜕皮激素对生理和训练后的影响
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-02 DOI: 10.1002/cem.3594
Patrizia Leogrande, Daniel Jardines, Dayamin Martinez Brito, Xavier de la Torre, Francesco Botrè, Andreas Luch, Patrick Diel, Maria Kristina Parr

This work aims to characterize the serum profile of athletes after the administration of ecdysteroids, natural steroid hormones recently reported to enhance athletic performance. The combination of mass spectrometry and chemometric tools may allow to differentiate physiological effects from post-training and intake-driven effects. Serum samples were collected from 46 healthy male volunteers and divided into four groups: control (two capsules/day of Peak Ecdysone without training), placebo (two capsules without ecdysteroids with training), Ec1 (two capsules/day Peak Ecdysone with training), and Ec2 (eight capsules/day Peak Ecdysone with training). Metabolic profiling was measured using a SCIEX Triple Quadrupole LC-MS/MS system coupled with the Biocrates AbsoluteIDQ p180 kit, which allows quantitation of a large panel of metabolites that were subjected to multivariate analysis. Unsupervised analysis of the data found no significant differences between the placebo and the ecdysteroid supplementation groups. By merging Ec1 and Ec2 into a single group, coded as treated, a clear discrimination between the control and placebo groups was observed. Phosphatidylcholines were among the most significant features of ecdysteroids administration, showing a dose-dependent effect in Ec1 and Ec2 groups. As specific metabolic phenotypes can result from years of training, the discrimination of physiological effects from those caused by the administration of banned substances can be a valuable analytical strategy for the interpretation of adverse analytical findings in the anti-doping field.

这项研究旨在分析运动员服用蜕皮激素后血清的特征,据报道,这种天然类固醇激素可提高运动员的运动成绩。质谱法和化学计量学工具的结合可以区分生理效应和训练后效应以及摄入驱动效应。研究人员收集了 46 名健康男性志愿者的血清样本,并将其分为四组:对照组(每天两粒峰值蜕皮激素,不进行训练)、安慰剂组(每天两粒不含蜕皮激素的胶囊,进行训练)、Ec1 组(每天两粒峰值蜕皮激素,进行训练)和 Ec2 组(每天八粒峰值蜕皮激素,进行训练)。代谢谱分析使用 SCIEX 三重四极杆 LC-MS/MS 系统和 Biocrates AbsoluteIDQ p180 试剂盒进行测量。对数据的无监督分析发现,安慰剂组和补充蜕皮激素组之间没有明显差异。将蜕皮激素 1 和蜕皮激素 2 合并为一个组,编码为 "治疗组",可以明显区分对照组和安慰剂组。磷脂酰胆碱是服用蜕皮激素的最显著特征之一,在 Ec1 和 Ec2 组中显示出剂量依赖性效应。由于多年的训练可能会产生特定的代谢表型,因此将生理效应与服用禁用物质所产生的效应区分开来,是解释反兴奋剂领域不良分析结果的一种有价值的分析策略。
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引用次数: 0
The MCR-ALS Trilinearity Constraint for Data With Missing Values 缺失值数据的 MCR-ALS 三线性约束
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-08-02 DOI: 10.1002/cem.3584
Adrián Gómez-Sánchez, Raffaele Vitale, Pablo Loza-Alvarez, Cyril Ruckebusch, Anna de Juan

Trilinearity is a property of some chemical data that leads to unique decompositions when curve resolution or multiway decomposition methods are used. Curve resolution algorithms, such as Multivariate Curve Resolution–Alternating Least Squares (MCR-ALS), can provide trilinear models by implementing the trilinearity condition as a constraint. However, some trilinear analytical measurements, such as excitation–emission matrix (EEM) measurements, usually exhibit systematic patterns of missing data due to the nature of the technique, which imply a challenge to the classical implementation of the trilinearity constraint. In this instance, extrapolation or imputation methodologies may not provide optimal results. Recently, a novel algorithmic strategy to constrain trilinearity in MCR-ALS in the presence of missing data was developed. This strategy relies on the sequential imposition of a classical trilinearity restriction on different submatrices of the original investigated dataset, but, although effective, was found to be particularly slow and requires a proper submatrix selection criterion. In this paper, a much simpler implementation of the trilinearity constraint in MCR-ALS capable of handling systematic patterns of missing data and based on the principles of the Nonlinear Iterative Partial Least Squares (NIPALS) algorithm is proposed. This novel approach preserves the trilinearity of the retrieved component profiles without requiring data imputation or subset selection steps and, as with all other constraints designed for MCR-ALS, offers the flexibility to be applied component-wise or data block-wise, providing hybrid bilinear/trilinear models. Furthermore, it can be easily extended to cope with any trilinear or higher-order dataset with whatever pattern of missing values.

三线性是某些化学数据的一个特性,在使用曲线解析或多向分解方法时会产生独特的分解。曲线解析算法,如多元曲线解析-替代最小二乘法(MCR-ALS),可以通过将三线性条件作为约束条件来提供三线性模型。然而,一些三线性分析测量,如激发-发射矩阵(EEM)测量,由于其技术性质,通常会出现系统性的数据缺失模式,这对经典的三线性约束条件的实现提出了挑战。在这种情况下,外推法或估算法可能无法提供最佳结果。最近,我们开发了一种新的算法策略,用于在存在缺失数据的情况下对 MCR-ALS 中的三线性进行约束。这种策略依赖于对原始调查数据集的不同子矩阵依次施加经典的三线性限制,但尽管有效,却发现速度特别慢,而且需要适当的子矩阵选择标准。本文根据非线性迭代部分最小二乘法(NIPALS)算法的原理,提出了一种更简单的 MCR-ALS 中三线性约束的实现方法,该方法能够处理系统性缺失数据模式。这种新颖的方法无需数据估算或子集选择步骤,就能保留检索到的成分剖面的三线性,而且与为 MCR-ALS 设计的所有其他约束一样,可以灵活地按成分或数据块应用,提供混合双线性/三线性模型。此外,它还可以很容易地扩展到任何三线性或高阶数据集,以应对任何缺失值模式。
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引用次数: 0
X-Ray Computed Tomography Meets Robust Chemometric Latent Space Modeling for Lean Meat Percentage Prediction in Pig Carcasses X 射线计算机断层扫描与用于猪胴体瘦肉率预测的鲁棒化学计量潜空间建模相结合
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-07-31 DOI: 10.1002/cem.3591
Puneet Mishra, Maria Font-i-Furnols

This study presents a case of processing X-ray computed tomography (CT) data for pork scans using chemometric latent space modeling. The distribution of voxel intensities is shown to exemplify a multivariate, multi-collinear signal mixture. While this concept is not novel, it is revisited here from a chemometric perspective. To extract meaningful information from such multivariate signals, latent space modeling based on partial least squares (PLS) is an ideal solution. Furthermore, a robust PLS approach is even more effective for latent space modeling, as it can extract latent spaces unaffected by outliers, thereby enhancing predictive modeling. As an example, lean meat percentage is predicted using X-ray CT data and robust PLS regression. This method is applicable to X-ray CT quantification analysis, particularly in cases where unclear, erroneous, and outlying observations are suspected in the data.

本研究介绍了利用化学计量潜空间建模处理猪肉扫描的 X 射线计算机断层扫描(CT)数据的案例。研究表明,体素强度的分布是多变量、多共线性信号混合物的典范。虽然这一概念并不新颖,但本文从化学计量学的角度对其进行了重新审视。要从这种多变量信号中提取有意义的信息,基于偏最小二乘法(PLS)的潜在空间建模是一种理想的解决方案。此外,稳健的偏最小二乘法对潜在空间建模更为有效,因为它可以提取不受异常值影响的潜在空间,从而增强预测建模能力。例如,利用 X 射线 CT 数据和稳健 PLS 回归预测瘦肉率。这种方法适用于 X 射线 CT 定量分析,特别是在怀疑数据中存在不清晰、错误和离群观测值的情况下。
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引用次数: 0
Determination of Tetracaine and Oxymetazoline in Drugs and Saliva via Potentiometric Sensor Arrays Based on Fluoropolymer/Polyaniline Composites 通过基于含氟聚合物/聚苯胺复合材料的电位计传感器阵列测定药物和唾液中的四氢卡因和羟甲唑啉
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-07-30 DOI: 10.1002/cem.3583
Anna Parshina, Anastasia Yelnikova, Valeria Shimbareva, Alla Komogorova, Polina Yurova, Irina Stenina, Olga Bobreshova, Andrey Yaroslavtsev

A growing interest in dental practice in intranasal anesthesia using tetracaine and oxymetazoline dictates the need for their simultaneous determination in combination drugs and human saliva. Potentiometric multisensory systems based on perfluorosulfonic acid membranes, including polyaniline-modified ones, were developed for these purposes. A change in the distribution of the sensor sensitivity to the related analytes was achieved by variation of the conditions for concentration polarization at the membrane interface with a studied solution due to a change in the intrapore volume, nature, and availability of the sorption centers, as well as the hydrophilicity of the membrane surface that were specified by the conditions for their synthesis and subsequent hydrothermal treatment. Reversibility of the analyte sorption using the chosen conditions for regeneration provided long-term stable work of both the sensors and the calibration equations established by multivariate linear regression. The membrane modification promoted their resistance to fouling. The relative errors of the simultaneous tetracaine and oxymetazoline determination in the combination drug solutions were no greater than 7% and 11%, while in the artificial saliva solutions, they were 15% and 17%, respectively, when an array of the cross-sensitive sensors based on the composite membranes prepared by different methods was used. The analysis errors were reduced to 3%–6% when analyzing the drug and to 0.2%–6% when analyzing the artificial saliva if an array was organized with the sensors based on the membrane with the dopant and the membrane without it, due to the decreasing correlation between their responses.

牙科医师对使用四卡因和奥美沙唑啉进行鼻内麻醉的兴趣日益浓厚,因此需要同时测定这两种药物在混合药物和人体唾液中的含量。为此,我们开发了基于全氟磺酸膜(包括聚苯胺改性膜)的电位计多感觉系统。通过改变膜与所研究溶液界面的浓度极化条件,可以改变传感器对相关分析物的灵敏度分布,这是由于膜的孔内体积、性质、吸附中心的可用性以及膜表面的亲水性发生了变化,这些都是由膜的合成和后续水热处理条件所决定的。利用所选择的再生条件进行分析吸附的可逆性为传感器和通过多元线性回归建立的校准方程提供了长期稳定的工作。膜改性提高了其抗污能力。使用以不同方法制备的复合膜为基础的交叉敏感传感器阵列,在混合药物溶液中同时测定四卡因和羟甲唑啉的相对误差分别不超过 7% 和 11%,而在人工唾液溶液中的误差分别为 15% 和 17%。如果使用基于含掺杂剂膜和不含掺杂剂膜的传感器组成阵列,分析药物时的分析误差可降至 3%-6%,分析人工唾液时的分析误差可降至 0.2%-6%,这是因为它们的响应之间的相关性降低了。
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引用次数: 0
Prediction of Flash Point of Materials Using Bayesian Kernel Machine Regression Based on Gaussian Processes With LASSO-Like Spike-and-Slab Hyperprior 利用基于高斯过程的贝叶斯核机器回归和类似于 LASSO 的尖峰和实验室超先验预测材料闪点
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-07-30 DOI: 10.1002/cem.3586
Keunhong Jeong, Ji Hyun Nam, Seul Lee, Jahyun Koo, Jooyeon Lee, Donghyun Yu, Seongil Jo, Jaeoh Kim

The determination of flash points is a critical aspect of chemical safety, essential for assessing explosion hazards and fire risks associated with flammable solutions. With the advent of new chemical blends and the increasing complexity of chemical waste management, the need for accurate and reliable flash point prediction methods has become more pronounced. This study introduces a novel predictive approach using Bayesian kernel machine regression (BKMR) with Gaussian process priors, designed to meet the growing demand for precise flash point estimation in the context of chemical safety. The BKMR model, underpinned by Bayesian statistics, offers a comprehensive framework that not only quantifies prediction uncertainty but also enhances interpretability amidst experimental data variability. Our comparative analysis reveals that BKMR surpasses traditional predictive models, including support vector machines, kernel ridge regression, and Gaussian process regression, in terms of accuracy and reliability across multiple metrics. By elucidating the intricate interactions between molecular features and flash point properties, the BKMR model provides profound insights into the chemical dynamics that influence flash point determinations. This study signifies a methodological leap in flash point prediction, offering a valuable tool for chemical safety analysis and contributing to the development of safer chemical handling and storage practices.

闪点的测定是化学品安全的一个重要方面,对于评估与易燃溶液相关的爆炸危险和火灾风险至关重要。随着新型化学混合物的出现和化学废物管理的日益复杂,对准确可靠的闪点预测方法的需求变得更加突出。本研究介绍了一种使用贝叶斯核机器回归(BKMR)和高斯过程先验的新型预测方法,旨在满足在化学品安全方面对精确闪点估计日益增长的需求。以贝叶斯统计为基础的 BKMR 模型提供了一个全面的框架,不仅能量化预测的不确定性,还能在实验数据多变的情况下提高可解释性。我们的比较分析表明,BKMR 在多个指标的准确性和可靠性方面超过了传统的预测模型,包括支持向量机、核岭回归和高斯过程回归。通过阐明分子特征与闪点特性之间错综复杂的相互作用,BKMR 模型对影响闪点测定的化学动力学提供了深刻的见解。这项研究标志着闪点预测方法的飞跃,为化学安全分析提供了宝贵的工具,并有助于开发更安全的化学品处理和储存方法。
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引用次数: 0
Extreme Learning Machine Combined With Whale Optimization Algorithm for Spectral Quantitative Analysis of Complex Samples 极限学习机与鲸鱼优化算法相结合,用于复杂样本的光谱定量分析
IF 2.3 4区 化学 Q1 SOCIAL WORK Pub Date : 2024-07-23 DOI: 10.1002/cem.3590
Yuxia Liu, Hao Sun, Chunyan Zhao, Changkun Ai, Xihui Bian

Extreme learning machine (ELM) is combined with the discretized whale optimization algorithm (WOA) for spectral quantitative analysis of complex samples. In this method, the spectral variables selected by the discretized WOA were used to build the ELM model. Before establishing the model, the activation function and the number of hidden nodes in ELM as well as the transfer function of the discretized WOA are determined. Furthermore, the predictive performance of the full-spectrum partial least squares (PLS), ELM, and WOA-ELM models was compared with four complex sample datasets: blood, light gas oil and diesel fuels, ternary mixture, and corn samples using root mean square error of prediction (RMSEP) and correlation coefficient (R). The results show that the WOA-ELM model has the best prediction accuracy compared to full-spectrum PLS and ELM models. Therefore, the proposed method provides a novel approach for the quantitative analysis of complex samples.

极限学习机(ELM)与离散鲸鱼优化算法(WOA)相结合,用于复杂样品的光谱定量分析。在该方法中,离散鲸鱼优化算法选择的光谱变量被用于建立 ELM 模型。在建立模型之前,先确定 ELM 的激活函数和隐节点数以及离散化 WOA 的传递函数。此外,还使用预测均方根误差(RMSEP)和相关系数(R)对全谱偏最小二乘法(PLS)、ELM 和 WOA-ELM 模型的预测性能与四个复杂样本数据集进行了比较:血液、轻质汽油和柴油燃料、三元混合物和玉米样本。结果表明,与全谱 PLS 和 ELM 模型相比,WOA-ELM 模型的预测精度最高。因此,所提出的方法为复杂样品的定量分析提供了一种新方法。
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引用次数: 0
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