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2013 39th Annual Northeast Bioengineering Conference最新文献

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Cross-Comparison between Two Multi-channel EMG Decomposition Algorithms Assessed with Experimental and Simulated Data 两种多通道肌电信号分解算法的实验与模拟对比研究
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.72
Yejin Li, C. Dai, E. Clancy, A. Christie, P. Bonato, K. McGill
The reliability of automated electromyogram (EMG) decomposition algorithms is important in clinical and scientific studies. In this paper, we analyzed the performance of two multi-channel decomposition algorithms -- Montreal and Fuzzy Expert using both experimental and simulated data. Comparison data consisted of quadrifiler needle EMG from the tibialis anterior muscle of 12 subjects (young and elderly) at three contraction levels (10, 20 and 50% MVC), and matched simulation data. Performance was assessed via agreement between the two algorithms for experimental data and accuracy with respect to the known decomposition for simulated data. For the experimental data, median agreement between the Montreal and Fuzzy Expert algorithms at 10, 20 and 50% MVC was 95.7, 86.4 and 64.8%, respectively. For the simulation data, median accuracy was 99.8%, 100% and 95.9% for Montreal, and 100%, 98% and 93.5% for Fuzzy Expert at the different contraction levels.
肌电图自动分解算法的可靠性在临床和科学研究中都很重要。在本文中,我们使用实验和模拟数据分析了两种多通道分解算法蒙特利尔和模糊专家的性能。对比数据包括12名受试者(青年和老年人)胫骨前肌在三个收缩水平(10,20和50% MVC)的四针肌电图,以及匹配的模拟数据。通过两种算法对实验数据和相对于已知的模拟数据分解的准确性之间的协议来评估性能。对于实验数据,Montreal和Fuzzy Expert算法在10、20和50% MVC下的一致性中位数分别为95.7、86.4和64.8%。对于模拟数据,蒙特利尔的中位数准确率为99.8%,100%和95.9%,模糊专家在不同收缩水平下的中位数准确率为100%,98%和93.5%。
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引用次数: 3
Constructing 3D-Printable CAD Models of Prostates from MR Images 从MR图像构建3d打印前列腺CAD模型
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.8
K. Breseman, Christopher L. Lee, B. Bloch, C. Jaffe
This paper describes the development of a procedure to generate patient-specific, three-dimensional (3D) solid models of prostates (and related anatomy) from magnetic resonance (MR) images. The 3D models are rendered in STL file format which can be physically printed or visualized on a holographic display system. An example is presented in which a 3D model is printed following this procedure.
本文描述了一种从磁共振(MR)图像中生成患者特异性的三维(3D)前列腺(及相关解剖)实体模型的程序的发展。3D模型以STL文件格式呈现,可以在全息显示系统上进行物理打印或可视化。给出了一个按照该方法打印3D模型的实例。
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引用次数: 2
Evaluation of Circumferential and Longitudinal Strain in a Rabbit Fetal Heart Model Using 4D Echocardiography 四维超声心动图评价兔胎心模型的周向和纵向应变
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.18
V. Apte, Lydia Tam, Angela Han, M. Zhu, M. Ashraf, D. Sahn, Zhijun Zhang
Strain determination in fetal hearts is essential but conventional methods do not provide opportunities for orthogonal strain analysis and require the use of EKG-gating. A new non-gated 4D echocardiography method was tested for accuracy in strain computation. Fifteen rabbit hearts were studied. Each heart was mounted in a water tank to facilitate ultrasound scanning, connected to a calibrated pump by a balloon sutured into the left ventricle (LV), and pumped at Stroke Volumes (SV) 1-5 ml and Stroke Rates (SR) 40 and 80 bpm. Three 0.7mm sonomicrometry crystals were secured in the myocardium to conduct longitudinal strain (LS) and circumferential strain (CS) measurements. At each SV and each SR, 4D images were obtained by an X6-1 probe interfaced with the Philips iU-22 ultrasound system while sonomicrometry displacement was recorded. This process was performed pre and post simulated myocardial infarction (MI). 4D images were analyzed offline for strain by a MATLAB-based program. 4D echocardiography-derived strain data correlated with sonomicrometry-derived strain at each SV (CS: R2 = 0.91, p<;0.05; LS: R2 = 0.87, p<;0.05). A decrease in strain post-MI was detected by both echocardiography and sonomicrometry. Non-gated 4D echocardiography is an accurate method for strain determination of fetal hearts.
胎儿心脏的应变测定是必要的,但传统的方法不提供正交应变分析的机会,需要使用心电图门控。试验了一种新的无门控四维超声心动图应变计算方法的准确性。研究了15只兔子的心脏。每颗心脏安装在水箱中便于超声扫描,通过缝合在左心室(LV)的球囊连接到校准泵,并以每搏1-5毫升(SV)和每搏速率(SR) 40和80 bpm的速度泵送。将3个0.7mm声压测量晶体固定在心肌中,进行纵向应变(LS)和周向应变(CS)测量。在每个SV和SR处,通过X6-1探针与Philips iU-22超声系统接口获得4D图像,同时记录声压测量位移。该过程分别在模拟心肌梗死(MI)前后进行。通过matlab程序离线分析4D图像的应变。4D超声心动图衍生应变数据与声速测量法衍生应变在各SV的相关性(CS: R2 = 0.91, p<;0.05;LS: R2 = 0.87, p<;0.05)。超声心动图和超声显微镜均检测到心肌梗死后应变下降。无门控四维超声心动图是一种准确的胎儿心脏应变测定方法。
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引用次数: 1
Vascular Smooth Muscle Cell Matrix-Degradation by Podosomes 血管平滑肌细胞基质的降解
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.151
Julie C. Kohn, François Bordeleau, C. Reinhart-King
During plaque formation, vascular smooth muscle cells migrate from the medial layer into the intima. The exact mechanism by which vascular smooth muscle cells (VSMCs) invade through the extracellular matrix into the intimal layer remains unclear. VSMCs have been shown to exhibit podosomes, sub-cellular structures known to release matrix metalloproteinases. Here, we investigated the formation and matrix degrading ability of podosomes in VSMCs before and after treatment with phorbol 12, 13-dibutyrate (PDBu), an activator of protein kinase C (PKC). Using a fluorescently-labeled gelatin substrate, we find that VSMC degrade matrix even in the absence of observable podosome formation. However, the extent of degradation is significantly increased when podosome formation is induced using PDBu. Our current work is expanding these studies to identify the physical triggers of podosome formation in the in vivo microenvironment.
在斑块形成过程中,血管平滑肌细胞从内层迁移到内膜。血管平滑肌细胞(VSMCs)通过细胞外基质侵入内膜的确切机制尚不清楚。VSMCs已显示出足质体,已知释放基质金属蛋白酶的亚细胞结构。在此,我们研究了蛋白激酶C (PKC)激活剂phorbol 12,13 -二丁酸酯(PDBu)处理前后VSMCs中足小体的形成和基质降解能力。使用荧光标记的明胶底物,我们发现VSMC即使在没有可观察到的足体形成的情况下降解基质。然而,当PDBu诱导足体形成时,降解程度显著增加。我们目前的工作是扩大这些研究,以确定体内微环境中足体形成的物理触发因素。
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引用次数: 0
Shape Memory Scaffold with a Tunable Recovery Temperature for Filling Critical-Size Bone Defects 具有可调恢复温度的形状记忆支架用于填充临界尺寸骨缺损
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.159
R. M. Baker, J. H. Henderson, P. Mather
Traditionally, critical-size defects have been treated using autologous bone grafts which, while being effective, have limitations that include donor site scarcity, additional pain, and donor site morbidity. Synthetic scaffolds show promise as alternate graft materials, but current scaffolds have limitations associated with filling and conforming to the defect site. In this study, we aimed to synthesize a cytocompatible scaffold with shape memory functionality that could address limitations associated with filling and conforming to the defect site. To achieve this goal we employed a porogen-leaching technique to fabricate a shape memory poly(epsilon-caprolactone) (PCL) foam capable of expanding to fill space under physiological temperatures. Tuning of the recovery temperature to a physiological temperature was achieved by copolymerizing with a second, hydrophilic polymer, as well as by varying the deformation temperature. The scaffold showed excellent shape fixing and shape recovery, and the transition temperature was tuned to a physiological range. Preliminary cell studies showed qualitatively that cells remain viable and proliferate on the scaffold.
传统上,使用自体骨移植治疗临界大小的缺损,虽然有效,但有局限性,包括供体部位稀缺、额外的疼痛和供体部位发病率。合成支架作为一种替代的移植物材料显示出良好的前景,但目前的支架在填充和符合缺陷部位方面存在局限性。在这项研究中,我们的目标是合成一种具有形状记忆功能的细胞相容性支架,可以解决与填充和符合缺陷部位相关的限制。为了实现这一目标,我们采用了一种孔隙浸出技术来制造一种形状记忆聚(epsilon-己内酯)(PCL)泡沫,该泡沫能够在生理温度下膨胀以填充空间。通过与第二种亲水性聚合物共聚以及改变变形温度,可以将恢复温度调整到生理温度。支架具有良好的形状固定和形状恢复能力,转变温度调节在生理范围内。初步的细胞研究定性地表明,细胞在支架上保持活力并增殖。
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引用次数: 0
Identifying a Structural Basis for Plexin A3 Homomeric Interactions 丛蛋白A3同质相互作用的结构基础鉴定
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.100
Rachael Barton, B. Berger, M. Iovine
Plexins are large transmembrane receptors known to interact with neuropilin 2 co-receptors and semaphorin ligands to regulate neuronal development. These receptors and ligands have recently been implicated in assisting cancer metastasis. While it is understood that plexin signaling occurs via Ras GTPase-activating proteins (Ras GAPs) and semaphorin binding occurs extracellularly, little is understood about the role of the transmembrane (TM) and cytosolic juxtamembrane (CYTO) regions in signaling and oligomerization. In this study, we focus on plexin A3 (PlA3) and show that individual amino acids in the TM and CYTO regions influence homooligomerization and, subsequently, function. We propose a model for the PlA3 oligomerization interface and use site-directed mutagenesis and the AraTM method to identify the role of individual amino acids in the TM-CYTO region that influence this oligomerization. Bioluminescent resonance energy transfer was used to confirm the impact of select amino acids on oligomerization in a mammalian cell membrane with a truncated receptor.
丛蛋白是一种大型的跨膜受体,已知与神经肽2共受体和信号素配体相互作用,调节神经元发育。这些受体和配体最近被认为与协助癌症转移有关。虽然我们知道丛蛋白信号通过Ras gtpase激活蛋白(Ras GAPs)发生,信号蛋白结合发生在细胞外,但我们对跨膜(TM)和胞质近膜(CYTO)区域在信号传导和寡聚化中的作用知之甚少。在这项研究中,我们将重点放在丛蛋白A3 (PlA3)上,并表明TM和CYTO区域的单个氨基酸影响同源寡聚并随后影响功能。我们提出了PlA3寡聚化界面的模型,并使用定点诱变和AraTM方法来确定TM-CYTO区域中影响这种寡聚化的单个氨基酸的作用。利用生物发光共振能量转移来证实选择氨基酸对具有截断受体的哺乳动物细胞膜中寡聚化的影响。
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引用次数: 0
EMG Bandwidth used in Signal Whitening 信号白化中肌电信号带宽的应用
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.87
Meera Dasog, Kishor Koirala, Pu Liu, E. Clancy
It has been demonstrated that whitening the surface electromyogram (EMG) improves EMG amplitude (EMGσ) estimation. But, due to the wide bandwidth ranges often used when whitening, custom high-cost electrodes (bandwidth of ~2000 Hz) have been used. This paper investigates the effect of limiting the bandwidth for the whitened EMG data. The change in the average error of EMG to torque estimation was observed for 54 subjects over different whitening bandwidths ranging from 20-2000 Hz. We found that the average error remained the same for bandwidth limits between 600 Hz to 2000 Hz, suggesting that wider EMG electrodes were not helpful with this data set.
研究表明,表面肌电白化可以改善肌电振幅(EMGσ)的估计。但是,由于美白时经常使用的带宽范围很宽,因此使用了定制的高成本电极(带宽为~2000 Hz)。本文研究了限制带宽对白化肌电图数据的影响。观察了54名受试者在20 ~ 2000 Hz不同白化带宽下肌电图对转矩估计的平均误差变化。我们发现,在600 Hz到2000 Hz的带宽范围内,平均误差保持不变,这表明更宽的肌电电极对该数据集没有帮助。
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引用次数: 4
Spatial Variation in Aorta Composition and Correlation with Mechanical Properties 主动脉组成的空间变异及其与力学性能的相关性
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.140
A. Hemmasizadeh, R. Cheheltani, S. Assari, N. Pleshko, K. Darvish
Aorta is composed of distinct anatomical layers and components with different mechanical characteristics. Understanding and characterization of the interactions between aorta building blocks and their mechanical properties enable us to quantify changes that may occur in the material behavior of aorta as a result of cardiovascular diseases. In the present work the microstructural and components' heterogeneity along the porcine thoracic aorta wall thickness was studied with histology and infrared spectroscopy, and the changes were correlated to the mechanical properties along the wall thickness determined from nanoindentation tests. Two layers of equal thickness were distinguishable based on the radial variations in the instantaneous Young's modulus E, elastic lamellae density (ELD) as calculated from histology, and the total amount of protein as determined from infrared spectroscopy. The results showed that compared with the inner half, the outer half layer is stiffer, elastic lamellae are denser and total protein content is higher. ELD and total protein are strongly correlated with mechanical properties. It is likely that disruption of this balance has a major effect on cardiovascular health and disease.
主动脉由不同的解剖层和具有不同力学特性的部件组成。了解和表征主动脉构件及其机械特性之间的相互作用,使我们能够量化心血管疾病导致的主动脉材料行为可能发生的变化。本文采用组织学和红外光谱技术研究了猪胸主动脉沿壁厚的微观结构和成分的异质性,并将其变化与纳米压痕试验测定的沿壁厚的力学性能相关联。根据瞬时杨氏模量E的径向变化,根据组织学计算的弹性片层密度(ELD)和红外光谱测定的蛋白质总量,可以区分两层厚度相等的层。结果表明,与内半层相比,外半层较硬,弹性片层较密,总蛋白含量较高。ELD和总蛋白与力学性能密切相关。这种平衡的破坏很可能对心血管健康和疾病产生重大影响。
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引用次数: 0
Integrated Indium Micromirrors for Optofluidics 光流体集成铟微镜
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.105
Rafael Gomez-Bule, Raul Broto-Cervera, C. Hsiao, R. Perez-Castillejos
Metallic mirrors are important components of optomicrofluidic systems for their good reflection properties. Their use, however, has remained challenging due to their difficult integration. We describe the integration of Indium (In) mirrors into microfluidic devices for optical detection using an approach that is fast, simple, and inexpensive.
金属反射镜具有良好的反射性能,是光学微流控系统的重要组成部分。然而,由于难以集成,它们的使用仍然具有挑战性。我们描述了铟(In)反射镜集成到微流体器件的光学检测,使用一种快速,简单,廉价的方法。
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引用次数: 0
Shear Properties of Cancellous Bone from Osteoporotic Sheep Treated with Synthetic Bone Mineral 合成骨矿物质对骨质疏松羊松质骨剪切性能的影响
Pub Date : 2013-04-05 DOI: 10.1109/NEBEC.2013.137
G. Feuer, James Bennett, S. Saha, D. Mijares
The aim of this study was to determine whether a calcium phosphate-based synthetic bone mineral (SBM) could increase bone strength by preventing bone loss induced by estrogen deficiency and accelerated by a combination of a low mineral diet plus corticosteroid injections in a large animal (ovine) model. Twenty-eight sheep were randomly allocated to four different groups: sham-operated, ovariectomy, SBM without fluoride (-F), and SBM with fluoride (+F). After eight months of treatment the sheep were sacrificed. There was a significant difference in the peak load, shear stress, stiffness, and density of the cancellous bone between the four different groups. Specifically, when the SBM with fluoride was compared to the ovariectomy group there was a significant improvement in peak load (p<;0.05), shear stress (p<;0.05), stiffness (p<;0.05), and density (p<;0.01) in the cancellous bone.
本研究的目的是确定在大型动物(羊)模型中,磷酸钙合成骨矿物质(SBM)是否可以通过预防雌激素缺乏引起的骨质流失来增加骨强度,并通过低矿物质饮食和皮质类固醇注射的组合加速骨质流失。将28只羊随机分为4组:假手术组、卵巢切除术组、不加氟组(-F)和加氟组(+F)。经过8个月的治疗,羊被宰杀了。四组间松质骨的峰值载荷、剪切应力、刚度和密度均有显著差异。具体而言,与卵巢切除术组相比,氟化SBM在松质骨的峰值负荷(p< 0.05)、剪切应力(p< 0.05)、刚度(p< 0.05)和密度(p< 0.01)方面均有显著改善。
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引用次数: 0
期刊
2013 39th Annual Northeast Bioengineering Conference
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