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Mutating PD-1 to Avoid PD-L1 From Binding Therefore Regulates NSCLC 突变PD-1以避免PD-L1结合从而调节非小细胞肺癌
Yih-wen Chen
Lung cancer is one of the most common types of cancer in human clinical cases. It has been a worldwide problem for hundreds of years. Currently, there are more research done on blocking the pathway between PD-1 and PD-L1 using drugs or antibodies; however, there are not that many papers that write about other ways to block the pathway such as knocking down ASN 45 in the PD-1 and PD-L1 binding domain using CRISPR to change PD-1’s structure, therefore, regulating the binding. This study investigates the effect of genetic engineered T cells on NSCLC xenograft mice. CRISPR to mutate PD1 amino acids(ASN 45) in the PDL1 binding domain in effector T cells and then inject the cells into NSCLC xenograft mice and see if tumor shrinks more than Wild Type PD1 control injections. Also measure the activation of the t cells in the tumor by isolating them by FACS and using FACS for CD69, pSrc, pErk to detect activation. Negative control is Wild Type PD1, positive control is Keytruda treatments with Wild Type PD1. The result of this study will provide essential information for the future research of PD-1 mutation. By mutating certain amino acid that is on the binding domain of PD-1 would change the structure of the glycoprotein and therefore avoid the combination of PD-1 and PD-L1, which would then forbid cancerous cells from evading immune detection.
肺癌是人类临床病例中最常见的癌症类型之一。数百年来,这一直是一个世界性的问题。目前,利用药物或抗体阻断PD-1与PD-L1之间通路的研究较多;然而,通过CRISPR敲除PD-1和PD-L1结合域的ASN 45,从而改变PD-1的结构,从而调节结合等其他阻断途径的文章并不多见。本研究探讨基因工程T细胞对非小细胞肺癌异种移植小鼠的影响。CRISPR突变效应T细胞中PDL1结合区域的PD1氨基酸(ASN 45),然后将细胞注射到NSCLC异种移植小鼠中,观察肿瘤是否比野生型PD1对照注射剂缩小得更多。同时通过FACS分离肿瘤中的t细胞,并使用FACS检测CD69、pSrc、pErk的活化情况,来测量肿瘤中t细胞的活化情况。阴性对照为野生型PD1,阳性对照为Keytruda治疗的野生型PD1。本研究结果将为今后PD-1突变的研究提供重要信息。通过改变PD-1结合区域上的某些氨基酸,可以改变糖蛋白的结构,从而避免PD-1和PD-L1的结合,从而阻止癌细胞逃避免疫检测。
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引用次数: 0
Construction of Knowledge Graph of Spleen and Stomach Diseases in Traditional Chinese Medicine Based on Neo4j 基于Neo4j的中医脾胃疾病知识图谱构建
Can Li, Feng Lin, Dan Xie
Traditional Chinese Medicine (TCM) has a lot of valuable experience in the treatment of spleen and stomach diseases. Over the years, a large number of clinical resources have been accumulated in electronic medical records (EMR), and researchers have also published many related research papers. In order to make better use of these data resources, this paper introduces a process and method to build a knowledge graph of spleen and stomach diseases in TCM, and takes the EMR of TCM for spleen and stomach diseases and related literature inscriptions as data sources, and selects four commonly used named entity recognition (NER) models for comparative experiments of NER. Then relation extraction is executed. Finally, the neo4j graphical database is used to realize the construction and visualization of the knowledge graph of the spleen and stomach diseases of TCM. The experimental results showed that the BERT-BiLSTM-CRF model is the best in extracting entities, extracting symptoms, Chinese and Western medical diagnoses, and other medical entities with an average F1 value of 88.31%, and extracting relationships between medical entities using the BiGRU-Attention model with an Acc value of 88.26%. The knowledge graph of spleen and stomach diseases constructed can be retrieved under neo4j from a number of diseases, symptoms, and others. The knowledge graph of spleen and stomach diseases can be retrieved from multiple perspectives, such as disease and symptoms under neo4j. The knowledge graph constructed in this paper will help to deeply explore the potential knowledge and intrinsic relationships in the clinical treatment data resources of spleen and stomach diseases of TCM, help to better inherit the experience, and improve the clinical level of TCM.
中医在脾胃疾病的治疗上有许多宝贵的经验。多年来,电子病历(electronic medical records, EMR)积累了大量的临床资源,研究者也发表了许多相关的研究论文。为了更好地利用这些数据资源,本文介绍了构建中医脾胃疾病知识图谱的流程和方法,并以中医脾胃疾病的EMR和相关文献铭文为数据源,选取了四种常用的命名实体识别(NER)模型进行NER对比实验。然后执行关系提取。最后,利用neo4j图形数据库实现中医脾胃病知识图谱的构建和可视化。实验结果表明,BERT-BiLSTM-CRF模型在提取实体、提取症状、中西医学诊断和其他医学实体方面效果最好,平均F1值为88.31%,使用BiGRU-Attention模型提取医学实体之间关系的Acc值为88.26%。在neo4j下,可以从许多疾病、症状和其他疾病中检索构建的脾胃疾病知识图谱。脾胃疾病的知识图谱可以从多个角度检索,例如neo4j下的疾病和症状。本文构建的知识图谱有助于深入挖掘中医脾胃病临床治疗数据资源中的潜在知识和内在关系,有助于更好地传承经验,提高中医临床水平。
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引用次数: 0
Cryptophycin's Clinical Use in Xenograft Pancreatic Tumor Cell Treatments Based on Computer Science 基于计算机科学的隐霉素在异种胰腺肿瘤细胞移植中的临床应用
Xi-ning Yao
Cryptophycin is a type a Cyanobacteria known for its anti-proliferation effect. In this experiment the effect of Cp-309 and Cryptophycin derivative on pancreatic tumor cells would be investigated. Mouse model was used, flow cytometry, Kaplan-Meier, tumor-size graph and weight monitor graph was plotted. These results were compared between different mouse models, treated with Germzar/5-FU/ONIVYDE, Cp-309 and derivative respectively. These experiments were meant to compare the effect of Cp-309 and derivative with Germzar/5-FU/ONIVYDE to determine clinical potential of Cp-309 and derivative.
隐藻素是一种以其抗增殖作用而闻名的蓝藻。本实验旨在探讨Cp-309及其隐藻素衍生物对胰腺肿瘤细胞的作用。采用小鼠模型,绘制流式细胞术、Kaplan-Meier图、肿瘤大小图和体重监测图。这些结果在不同小鼠模型中进行了比较,分别用gerzar /5-FU/ONIVYDE、Cp-309和衍生物处理。这些实验旨在比较Cp-309及其衍生物与gerzar /5-FU/ONIVYDE的效果,以确定Cp-309及其衍生物的临床潜力。
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引用次数: 0
Clinical research progress of acupuncture in the treatment of sciatica 针刺治疗坐骨神经痛的临床研究进展
Fengyuan Bai, Renjun Cai, Jiajia Fan, Tao Liu, Qiu-ling Xu
Sciatica is a common chronic pain, which poses a great pain and suffering to patients and a serious burden to individuals and society. In recent years, acupuncture therapy, moxibustion therapy, and acupuncture combined with Chinese medicine techniques have made some achievements in the treatment of sciatica, and acupuncture has great advantages in the treatment of sciatica. However, with the rapid development of information technology in contemporary society, traditional acupuncture research methods can no longer cope with the development of modern acupuncture, and artificial intelligence technology has greatly improved acupuncture research methods, which is an acupuncture research method worthy of in-depth promotion and application. In the new era of artificial intelligence, in this article, to further explore the clinical efficacy characteristics of acupuncture in the treatment of sciatica and to explore the best treatment options, the clinical research status of common acupuncture therapies in the treatment of sciatica in recent years is reviewed.
坐骨神经痛是一种常见的慢性疼痛,给患者带来了巨大的痛苦和痛苦,给个人和社会带来了严重的负担。近年来,针刺疗法、艾灸疗法、针刺结合中医手法在治疗坐骨神经痛方面取得了一定的成果,针刺在治疗坐骨神经痛方面具有很大的优势。然而,随着当代社会信息技术的飞速发展,传统的针灸研究方法已经无法应对现代针灸的发展,而人工智能技术极大地改进了针灸研究方法,是一种值得深入推广应用的针灸研究方法。在人工智能新时代,本文为进一步探讨针刺治疗坐骨神经痛的临床疗效特点,探索最佳治疗方案,对近年来常用针刺疗法治疗坐骨神经痛的临床研究现状进行综述。
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引用次数: 0
Research on identification of abnormal foot arch in school-age children based on foot pressure analysis 基于足压分析的学龄期儿童异常足弓识别研究
Hongjie Chen, Yuan-Ming Pan, Jiaxin Zhao, Yawen Zhou, Mingyang Li, Xupeng Wang
Abnormal arch can have a persistent impact on children's gait, causing severe foot diseases include hallux valgus and foot valgus, even causing irreversible interference with gait in adulthood. Therefore, it is of very important theoretical and practical significance to realize the early identification and abnormal arch identification of school-age children. In this paper, a method for rapid identification of foot arch based on plantar pressure was used to conduct foot pressure test and foot arch identification experiments on 16 school-age children of grade 3. The study found that 12.5% of the male students had flatfoot on their left foot and 62.5% had flatfoot on their right foot; Among the female students, 25% were left flatfoot and 37.5% were right flatfoot. It can be seen that the abnormal arch in school-age children is more common, which should be paid more attention to. In addition, medical diagnosis and intervention treatment are performed as early as possible.
足弓异常会对儿童的步态产生持续性影响,引起严重的足部疾病,包括拇外翻和足外翻,甚至对成年后的步态造成不可逆的干扰。因此,实现学龄儿童的早期识别和异常弓识别具有非常重要的理论和现实意义。本文采用基于足底压力快速识别足弓的方法,对16名3年级学龄儿童进行足压测试和足弓识别实验。研究发现,12.5%的男生左脚有扁平足,62.5%的男生右脚有扁平足;女生中左扁平足占25%,右扁平足占37.5%。由此可见,学龄儿童的弓异常较为常见,应引起更多的重视。此外,尽早进行医疗诊断和干预治疗。
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引用次数: 1
Three-dimensional morphology was used to analyze the influence of posterior teeth loss on temporomandibular joint 采用三维形态学方法分析后牙脱落对颞下颌关节的影响
Chongzhi Yin, Yuanli Zhang
Objective: To explore the influence of posterior teeth loss on temporomandibular joint by three-dimensional morphological analysis. Methods: 3D data were obtained by holographic scanning and measuring the models of teeth and chin, and the 3D models were constructed by computer. Results: Under normal conditions, the maximum compressive stress of temporomandibular joint is located in the anterior medial side of condylar cartilage, the stress of condylar head is higher than that of medial and lateral sides, and the compressive stress of articular disc is the highest in medial and lateral sides. The compressive stress of the anterior condyle slope is significantly higher than that of the corresponding part of the articular disc (P<0.01). Conclusion: The change of temporomandibular joint pressure caused by tooth loss will be greatly improved after denture restoration. Therefore, in the case of missing posterior teeth, especially when a large number of molars and loose ends are missing, in order to prevent periodontal disease and temporomandibular joint disease, it is strongly required to repair them as soon as possible.
目的:通过三维形态学分析探讨后牙脱落对颞下颌关节的影响。方法:通过全息扫描测量牙齿和下巴模型,获得三维数据,并通过计算机建立三维模型。结果:正常情况下,颞下颌关节的最大压应力位于髁软骨的前内侧,髁头的应力高于内侧和外侧,关节盘的压应力在内侧和外侧最高。前髁坡的压应力显著高于关节盘相应部位(P<0.01)。结论:假牙修复后,因牙齿脱落引起的颞下颌关节压力变化将得到明显改善。因此,在后牙缺失的情况下,特别是当大量臼齿和松动末端缺失时,为了预防牙周病和颞下颌关节疾病,强烈要求尽快修复。
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引用次数: 0
An adaptive weight texture classification method based on Local Binary Pattern Variance 基于局部二值模式方差的自适应加权纹理分类方法
Hao Chen, Wending Tang, Ran Tao
The extraction of local texture information using the traditional Local Binary Mode (LBP) is limited, and it ignores the representation of global texture information, which leads to an unsatisfactory outcome for the texture classification task. Local Binary Mode (LBP) has been widely used in texture classification. This paper utilizes LBPV to resolve this issue (Local Binary Pattern Variance) and proposes a novel adaptive weight joint multi-scale LBPV2 texture picture classification algorithm. The typical variance weight is replaced by the square of covariance as the cumulative weight of the histogram in this method, and the multi-scale texture information is retrieved using an adaptive weight and multi-scale scheme. Thus, the texture classification performance is further improved. Simulation experiments on the commonly used Outex reference texture database show that the proposed adaptive weight combined with multi-scale LBPV2 can significantly improve the performance of texture classification. In the fields of computer vision and pattern recognition, texture analysis is a fundamental visual problem with a wide range of applications, including object detection, remote sensing, content-based image retrieval, and medical picture analysis. For various research questions, numerous academics have put forth various LBP versions in recent years. The dominant LBP [2] model was proposed by Liao et al. in 2009, and it was empirically chosen as the best model out of all the models. Guo et al. proposed LBPV [3], which expresses local contrast information into the straight square of texture images using a local variance confidence and global matching scheme. In order to increase classification performance, the author also proposed a Completed Local Binary Pattern (CLBP) [4] in the same year. This pattern combines three complimentary groups—CLBPS, CLBPM, and CLBPC—using a combined probability distribution. To enhance the traditional local binary pattern's noise resistance and texture expression, Liu et al. proposed the extension of LBP [5] in 2012. Relevant scholars developed a pixel block sampling structure and local neighborhood intensity relationship model for texture classification in 2013 on the basis of conventional LBP [6], and produced notable results. More recently, in 2017, a multiscale LBP [7] was presented, transcending the constraints of conventional LBP representation and not only reflecting the microscopic texture structure but also effectively expressing the macroscopic texture structure of bigger areas. Although LBP and its variations have produced a number of remarkable texture classification results, there are still a lot of possible shortcomings. The expression of nearly entirely lost global information, for instance, results in inadequate texture classification results because most LBP versions are only capable of representing local texture information [1]. In order to significantly improve texture performance, this paper proposed a new me
传统的局部二值模式(local Binary Mode, LBP)在提取局部纹理信息时存在局限性,并且忽略了全局纹理信息的表示,导致纹理分类任务的结果不理想。局部二值模式(LBP)在纹理分类中得到了广泛的应用。本文利用LBPV算法解决了局部二值模式方差问题,提出了一种新的自适应加权联合多尺度LBPV2纹理图像分类算法。该方法以协方差平方代替典型方差权重作为直方图的累积权重,采用自适应权值和多尺度方案检索多尺度纹理信息。从而进一步提高了纹理分类性能。在常用的Outex参考纹理数据库上进行的仿真实验表明,本文提出的自适应权值与多尺度LBPV2相结合可以显著提高纹理分类的性能。在计算机视觉和模式识别领域,纹理分析是一个具有广泛应用的基本视觉问题,包括目标检测、遥感、基于内容的图像检索和医学图像分析。针对不同的研究问题,近年来众多学者提出了不同的LBP版本。支配性LBP[2]模型由Liao等人于2009年提出,并经经验选择为所有模型中的最佳模型。Guo等人提出了LBPV[3],利用局部方差置信度和全局匹配方案,将纹理图像的局部对比度信息表达为直方形。为了提高分类性能,作者还在同年提出了一种完整的局部二值模式(complete Local Binary Pattern, CLBP)[4]。此模式使用组合概率分布将三个互补组(clbps、CLBPM和clbpc)组合在一起。为了增强传统局部二值模式的抗噪性和纹理表达能力,Liu等人在2012年提出了LBP的扩展[5]。2013年,相关学者在传统LBP的基础上开发了一种用于纹理分类的像素块采样结构和局部邻域强度关系模型[6],并取得了显著的成果。最近,在2017年,提出了一种多尺度LBP[7],超越了传统LBP表示的限制,不仅可以反映微观纹理结构,还可以有效地表达更大区域的宏观纹理结构。尽管LBP及其变化产生了许多显著的纹理分类结果,但仍然存在许多可能存在的缺点。例如,由于大多数LBP版本仅能够表示局部纹理信息,因此几乎完全丢失全局信息的表达导致纹理分类结果不充分[1]。为了显著提高纹理图像的分类性能,本文提出了一种自适应权重联合多尺度LBPV2纹理图像分类方法。通过引入自适应权重分类,将LBPV计算方法中的方差权重替换为方差平方作为直方图的累积权重。
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引用次数: 1
Overview of Filtering Algorithms for Autonomous Mobile Robots 自主移动机器人滤波算法综述
Zihao Zhang
In this paper, three filtering algorithms in SLAM for autonomous mobile robots will be referred to, which are Kalman Filter Family (Kalman Filter and Extended Kalman Fiter), Particle Filtering (PF) and Rao-Blackwellized Particle Filter (RBPF). For a mobile robot, localization and mapping are the key indicators that determine whether it can be called “autonomous” or not. The algorithm is the most important of them all. In the case of SLAM algorithms, there exist three algorithms based on optimization, based on filtering, and based on Georgia Tech Smoothing and Mapping (GTSAM). The filtering algorithm, as the oldest algorithm, is the focus of this paper. And a large number of existing studies in the broader literature have examined that Bayesian filtering is the basis of KF, EKF and PF. In the following paragraphs, in order to better represent the development process of filtering algorithms, we will start with Bayesian filtering and introduce its theoretical framework, as well as the origin and derivation process of several subsequent filters.
本文将介绍自主移动机器人SLAM中的三种滤波算法,分别是卡尔曼滤波族(Kalman Filter和Extended Kalman Filter)、粒子滤波(Particle filtering, PF)和Rao-Blackwellized Particle Filter (RBPF)。对于一个移动机器人来说,定位和映射是决定它是否能被称为“自主”的关键指标。算法是其中最重要的。在SLAM算法中,主要有基于优化、基于滤波和基于Georgia Tech Smoothing and Mapping (GTSAM)的三种算法。滤波算法作为最古老的算法,是本文研究的重点。而且已有的大量研究和更广泛的文献已经检验了贝叶斯滤波是KF、EKF和PF的基础。在接下来的段落中,为了更好地代表滤波算法的发展过程,我们将从贝叶斯滤波开始,介绍它的理论框架,以及后续几种滤波器的起源和推导过程。
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引用次数: 0
Distinguishing the Hook Effect in Lateral Flow Sandwich Immunoassays Using Deep-Learning Algorithm 利用深度学习算法识别横向流夹心免疫分析中的钩效应
Shang Liu, Jianbin Tang
Hook effect is now widely present in sandwich lateral flow assay reactions, which refers to the phenomenon of false-negative results due to inappropriate antigen-antibody ratios, and can greatly limit the true color development of test strip strips under high sample concentration conditions, thus limiting quantitative detection. In this study, we developed a novel deep learning-based discrimination algorithm to accurately distinguish whether the strips are affected by the hook effect, which not only saves cost and manpower, but also clears the way for subsequent immunochromatographic quantification.
钩效应目前广泛存在于夹心横向流动测定反应中,是指由于抗原-抗体比例不合适而导致假阴性结果的现象,在高样品浓度条件下,钩效应极大地限制了检测条的真色显色,从而限制了定量检测。在本研究中,我们开发了一种新的基于深度学习的判别算法,能够准确判别条带是否受到钩效应的影响,不仅节省了成本和人力,而且为后续的免疫层析定量扫清了道路。
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引用次数: 0
Research progress on transmission routes of COVID-19 COVID-19传播途径研究进展
Dazhang Yang, Zhikang Yang, Qing-Min Zhang
The COVID-19 (SARS-CoV-2) pandemic has become an urgent issue and attracted extensive attention all over the world due to its strong infectivity and high mortality. The outbreak of COVID-19 has a negative impact on the development of the world economy, brought inconvenience to people's daily life and threatened our health safety. Considering the global spread of COVID-19 disease with the tremendous number of infections and also deaths, understanding the transmission modes of this virus to formulate effective prevention and control strategies is of vital importance. This paper reviews three main transmission routes (contact, droplet and aerosol) and three possible transmission routes (maternal-infant, fecal-oral and cross-species) of COVID-19, which has reference value and guiding significance for the prevention and control of COVID-19 in the future.
新型冠状病毒肺炎(SARS-CoV-2)因其传染性强、致死率高,已成为一个紧迫的问题,引起了全世界的广泛关注。新冠肺炎疫情给世界经济发展带来负面影响,给人们的日常生活带来不便,威胁到我们的健康安全。鉴于COVID-19疾病在全球范围内传播,感染和死亡人数巨大,了解病毒的传播方式对制定有效的预防和控制策略至关重要。本文综述了COVID-19的三种主要传播途径(接触、飞沫和气溶胶)和三种可能的传播途径(母婴、粪口和跨种),对今后COVID-19的防控具有参考价值和指导意义。
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引用次数: 0
期刊
Proceedings of the 3rd International Symposium on Artificial Intelligence for Medicine Sciences
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