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Increasing photosynthetic benefit with decreasing irrigation frequency in an Australian temperate pasture exposed to elevated carbon dioxide. 减少灌溉频率增加澳大利亚温带牧场暴露于高二氧化碳的光合效益。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-07 DOI: 10.1093/jxb/erae511
Melika L Missen, Martin G De Kauwe, Mark J Hovenden

Elevated atmospheric CO2 (e[CO2]) often enhances plant photosynthesis and improves water status. However, the effects of e[CO2] vary significantly and are believed to be influenced by water availability. With the future warmer climate expected to increase the frequency and severity of extreme rainfall, the response of plants to e[CO2] under changing precipitation patterns remains uncertain. We examined the effects of e[CO2] and different irrigation regimes on perennial ryegrass in a Free-Air CO2 Enrichment (FACE) experiment. Immediately after irrigation, the mean net photosynthetic rate was 21.2% higher under e[CO2] compared to ambient conditions. This benefit increased over time, reaching 31.3% higher as days since watering increased, indicating a substantial increase in photosynthetic benefit with longer intervals between watering. Mean stomatal conductance was 21% lower in ryegrass under e[CO2] immediately after irrigation compared to ambient plots. However, the reduction in stomatal conductance under e[CO2] decreased as the interval between irrigation events increased, showing no difference 7-10 days after an irrigation event. These results imply that plants benefit most from carbon fertilisation, assimilating relatively more carbon and losing less water, during periods with less frequent rainfall. These findings have significant implications for understanding leaf-level responses to climate change.

大气中升高的CO2 (e[CO2])常常增强植物的光合作用并改善水分状况。然而,e[CO2]的影响差异很大,而且据信受到水供应的影响。随着未来气候变暖预计将增加极端降雨的频率和严重程度,在降水模式变化的情况下,植物对e[CO2]的响应仍然不确定。在自由空气CO2富集(FACE)试验中,研究了e[CO2]和不同灌溉制度对多年生黑麦草的影响。灌水后立即,e[CO2]处理下的平均净光合速率比环境条件下高21.2%。这一效益随着时间的推移而增加,随着浇水天数的增加,达到31.3%,表明随着浇水间隔的延长,光合效益大幅增加。灌水后立即灌入e[CO2]的黑麦草的平均气孔导度比环境样地低21%。然而,在e[CO2]条件下,气孔导度的降低随灌水事件间隔的增加而减少,在灌水事件发生后7-10天没有差异。这些结果表明,在降雨较少的时期,植物从碳施肥中获益最多,吸收了相对较多的碳,失去了较少的水分。这些发现对于理解叶片对气候变化的响应具有重要意义。
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引用次数: 0
Recent advances in paclitaxel biosynthesis and regulation. 紫杉醇生物合成与调控的最新进展。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae240
Toby Coombe-Tennant, Xiaoping Zhu, Shihua Wu, Gary J Loake

Paclitaxel (PTX) is a high value plant natural product derived from Taxus (yew) species. This plant specialized metabolite (PSM) and its derivatives constitute a cornerstone for the treatment of an increasing variety of cancers. New applications for PTX also continue to emerge, further promoting demand for this WHO-designated essential medicine. Here we review recent advances in our understanding of PTX biosynthesis and its cognate regulation, which have been enabled by the development of transcriptomic approaches and the recent sequencing and annotation of three Taxus genomes. Collectively, this has resulted in the elucidation of two functional gene sets for PTX biosynthesis, unlocking new potential for the use of heterologous hosts to produce PTX. Knowledge of the PTX pathway also provides a valuable resource for understanding the regulation of this key PSM. Epigenetic regulation of PSM in plant cell culture is a major concern for PTX production, given the loss of PSM production in long-term cell cultures. Recent developments aim to design tools for manipulating epigenetic regulation, potentially providing a means to reverse the silencing of PSM caused by DNA methylation. Exciting times clearly lie ahead for our understanding of this key PSM and improving its production potential.

紫杉醇(PTX)是从紫杉树种中提取的一种高价值植物天然产物(PNP)。这种植物次生代谢物(PSM)及其衍生物是治疗越来越多癌症的基石。PTX 的新应用也不断涌现,进一步促进了对这种世界卫生组织指定基本药物的需求。在此,我们回顾了最近在了解 PTX 生物合成及其同源调控方面取得的进展,这些进展得益于转录组学方法的发展以及最近对三个紫杉基因组的测序和注释。总之,这使得 PTX 生物合成的两个功能基因组得以阐明,为利用异源宿主生产 PTX 释放了新的潜力。对 PTX 途径的了解也为了解这一关键 PSM 的调控提供了宝贵的资源。植物细胞培养(PCC)中 PSM 的表观遗传调控是 PTX 生产的一个主要问题,因为长期细胞培养会损失 PSM 的生产。最近的发展旨在设计操纵表观遗传调控的工具,有可能提供一种逆转 DNA 甲基化导致的 PSM 沉默的方法。显然,未来将是我们了解这种关键 PSM 并提高其生产潜力的激动人心的时刻。
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引用次数: 0
Harnessing controlled-environment systems for enhanced production of medicinal plants. 利用受控环境系统提高药用植物的产量。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae248
Ajwal Dsouza, Mike Dixon, Mukund Shukla, Thomas Graham

Medicinal plants are valued for their contributions to human health. However, the growing demand for medicinal plants and the concerns regarding their quality and sustainability have prompted the reassessment of conventional production practices. Controlled-environment cropping systems, such as vertical farms, offer a transformative approach to production of medicinal plants. By enabling precise control over environmental factors, such as light, carbon dioxide, temperature, humidity, nutrients, and airflow, controlled environments can improve the consistency, concentration, and yield of bioactive phytochemicals in medicinal plants. This review explores the potential of controlled-environment systems for enhancing production of medicinal plants. First, we describe how controlled environments can overcome the limitations of conventional production in improving the quality of medicinal plants. Next, we propose strategies based on plant physiology to manipulate environmental conditions for enhancing the levels of bioactive compounds in plants. These strategies include improving photosynthetic carbon assimilation, light spectrum signalling, purposeful stress elicitation, and chronoculture. We describe the underlying mechanisms and practical applications of these strategies. Finally, we highlight the major knowledge gaps and challenges that limit the application of controlled environments, and discuss future research directions.

药用植物(MPs)因其对人类健康的贡献而备受重视。然而,对药用植物日益增长的需求以及对其质量和可持续性的担忧,促使人们重新评估传统的生产实践。受控环境种植系统(如垂直农场)为药用植物生产提供了一种变革性方法。通过对光照、二氧化碳、温度、湿度、养分和气流等环境因素进行精确控制,受控环境可以提高 MPs 中生物活性植物化学物质的一致性、浓度和产量。本综述探讨了受控环境系统在提高 MP 生产方面的潜力。首先,我们介绍了受控环境如何克服传统生产在提高 MP 质量方面的局限性。接下来,我们提出了基于植物生理学的策略,以操纵环境条件来提高植物中生物活性化合物的水平。这些策略包括改善光合碳同化、光光谱信号、有目的的胁迫诱导和时序栽培。我们将介绍这些策略的基本机制和实际应用。最后,我们强调了限制受控环境应用的主要知识差距和挑战,并讨论了未来的研究方向。
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引用次数: 0
Sink strength, nutrient allocation, cannabinoid yield, and associated transcript profiles vary in two drug-type Cannabis chemovars. 两种药物型大麻化学变种的沉降强度、养分分配、大麻素产量和相关转录本特征各不相同。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae367
Ricarda Jost, Oliver Berkowitz, Amelia Pegg, Bhavna Hurgobin, Muluneh Tamiru-Oli, Matthew T Welling, Myrna A Deseo, Hannah Noorda, Filippa Brugliera, Mathew G Lewsey, Monika S Doblin, Antony Bacic, James Whelan

Cannabis sativa L. is one of the oldest domesticated crops. Hemp-type cultivars, which predominantly produce non-intoxicating cannabidiol (CBD), have been selected for their fast growth, seed, and fibre production, while drug-type chemovars were bred for high accumulation of tetrahydrocannabinol (THC). We investigated how the generation of CBD-dominant chemovars by introgression of hemp- into drug-type Cannabis impacted plant performance. The THC-dominant chemovar showed superior sink strength, higher flower biomass, and demand-driven control of nutrient uptake. By contrast, the CBD-dominant chemovar hyperaccumulated phosphate in sink organs leading to reduced carbon and nitrogen assimilation in leaves, which limited flower biomass and cannabinoid yield. RNA-seq analyses determined organ- and chemovar-specific differences in expression of genes associated with nitrate and phosphate homeostasis as well as growth-regulating transcription factors that were correlated with measured traits. Among these were genes positively selected for during Cannabis domestication encoding an inhibitor of the phosphate starvation response, SPX DOMAIN GENE3, nitrate reductase, and two nitrate transporters. Altered nutrient sensing, acquisition, or distribution are likely a consequence of adaption to growth on marginal, low-nutrient-input lands in hemp. Our data provide evidence that such ancestral traits may become detrimental for female flower development and consequently overall CBD yield in protected cropping environments.

大麻(Cannabis sativa L.)是最古老的驯化作物之一。大麻型栽培品种主要生产无毒大麻二酚(CBD),因其生长快、种子和纤维产量高而被选育出来,而毒品型化学变种则因四氢大麻酚(THC)的高积累而被培育出来。我们研究了通过将大麻引种到药物型大麻中产生的 CBD 优势化学变种对植物性能的影响。四氢大麻酚主导型化学变种表现出更强的吸水能力、更高的花朵生物量以及对养分吸收的需求驱动控制。相比之下,CBD 优势化学变种在沉降器官中过度积累磷酸盐,导致叶片中的碳和氮同化减少,从而限制了花的生物量和大麻素产量。RNA-seq 分析确定了与硝酸盐和磷酸盐平衡相关的基因以及生长调节转录因子在表达上的器官特异性和化生体特异性差异,这些差异与测量的性状相关。这些基因包括在大麻驯化过程中被积极选择的编码磷酸盐饥饿反应抑制剂 SPX DOMAIN GENE3、硝酸盐还原酶和两个硝酸盐转运体的基因。养分感应、获取或分配的改变很可能是大麻适应在贫瘠、低养分输入土地上生长的结果。我们的数据提供的证据表明,在受保护的种植环境中,这些祖先性状可能会不利于雌花的发育,进而不利于CBD的总体产量。
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引用次数: 0
Same, yet different: towards understanding nutrient use in hemp- and drug-type Cannabis. 相同却又不同:了解大麻和毒品大麻的营养成分使用情况。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae362
Benjamin Wee Y, Oliver Berkowitz, James Whelan, Ricarda Jost

Cannabis sativa L., one of the oldest cultivated crops, has a complex domestication history due to its diverse uses for fibre, seed, oil, and drugs, and its wide geographic distribution. This review explores how human selection has shaped the biology of hemp and drug-type Cannabis, focusing on acquisition and utilization of nitrogen and phosphorus, and how resulting changes in source-sink relations shape their contrasting phenology. Hemp has been optimized for rapid, slender growth and nutrient efficiency, whereas drug-type cultivars have been selected for compact growth with large phytocannabinoid-producing female inflorescences. Understanding these nutrient use and ontogenetic differences will enhance our general understanding of resource allocation in plants. Knowledge gained in comparison with other model species, such as tomato, rice, or Arabidopsis can help inform crop improvement and sustainability in the cannabis industry.

大麻(Cannabis sativa L.)是人类最古老的栽培作物之一,由于其纤维、种子、油脂和药物等多种用途及其广泛的地理分布,其驯化历史十分复杂。本综述探讨人类的选择如何塑造了大麻和毒品大麻的生物学特性,重点是氮和磷的获取和利用,以及由此导致的源-汇关系变化如何塑造了它们截然不同的物候学。大麻经过优化,能够快速、纤细地生长并提高养分效率,而毒品类栽培品种则经过筛选,能够紧凑生长并形成大型的植物大麻素雌花序。了解这些养分利用和本体发育的差异,将加深我们对植物资源分配的总体认识。通过与其他模式物种(如番茄、水稻或拟南芥)进行比较而获得的知识有助于为大麻产业的作物改良和可持续发展提供信息。
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引用次数: 0
From fibers to flowering to metabolites: unlocking hemp (Cannabis sativa) potential with the guidance of novel discoveries and tools. 从纤维到开花,再到代谢物:在新发现和新工具的指导下释放大麻(Cannabis sativa L.)的潜力。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae405
Francesco Pancaldi, Elma M J Salentijn, Luisa M Trindade

Cannabis sativa L. is an ancient crop, but its agricultural adoption has been interrupted to prevent the use of marijuana as a psychoactive drug. Nevertheless, hemp-the C. sativa type with low concentrations of intoxicating Δ9-tetrahydrocannabinoid-is experiencing a resurgence in interest due to loosened cultivation restrictions and its potential as a multipurpose bio-based crop. Hemp has valuable applications, including production of medicines from its non-intoxicating cannabinoids, food, medical, and industrial uses of its seed oil rich in polyunsaturated fatty acids, and production of fibers for textiles and industry from its stems. Recently, several hemp genomic and genetic resources have been developed, allowing significant expansion of our knowledge of major hemp traits, such as synthesis of cannabinoids, oil, and fibers, and regulation of flowering and sex determination. Still, hemp is an underimproved crop, and its development will depend on the ability to expand and collectively use the novel resources arising from fast advancements in bioinformatics and plant phenotyping. This review discusses current genetic and genomic knowledge of the most important hemp traits, and provides a perspective on how to further expand such knowledge and tackle hemp improvement with the most up-to-date tools for plant and hemp research.

大麻(Cannabis sativa L.)是一种古老的作物,其农业应用曾一度中断,以防止大麻被用作精神活性药物。然而,由于种植限制的放宽以及大麻作为多用途生物基作物的潜力,人们对大麻(大麻属植物,含有低浓度的Δ9-四氢大麻酚)的兴趣又重新燃起。事实上,大麻具有宝贵的应用价值,包括利用其不具毒性的大麻素生产药物,利用其富含多不饱和脂肪酸的种子油进行食品、医疗和工业用途,以及利用其茎生产纺织和工业用纤维。最近,开发了一些大麻基因组和遗传资源,大大扩展了有关大麻主要性状的遗传知识,如大麻素、油和纤维的合成,以及开花和性别决定的调控。不过,大麻仍是一种未得到充分改良的作物,其发展将取决于能否根据生物信息学和植物表型技术的快速发展,扩大并共同利用现有的新资源。本综述讨论了当前有关最重要大麻性状的遗传和基因组知识,并就如何进一步扩展这些知识以及如何利用植物和大麻研究的最新工具来改良大麻提供了一个视角。
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引用次数: 0
Genomic and cell-specific regulation of benzylisoquinoline alkaloid biosynthesis in opium poppy. 罂粟中苄基异喹啉类生物碱合成的基因组和细胞特异性调控
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae317
Uyen Vu Thuy Hong, Muluneh Tamiru-Oli, Bhavna Hurgobin, Mathew G Lewsey

Opium poppy is a crop of great commercial value as a source of several opium alkaloids for the pharmaceutical industries including morphine, codeine, thebaine, noscapine, and papaverine. Most enzymes involved in benzylisoquinoline alkaloid (BIA) biosynthesis in opium poppy have been functionally characterized, and opium poppy currently serves as a model system to study BIA metabolism in plants. BIA biosynthesis in opium poppy involves two biosynthetic gene clusters associated respectively with the morphine and noscapine branches. Recent reports have shown that genes in the same cluster are co-expressed, suggesting they might also be co-regulated. However, the transcriptional regulation of opium poppy BIA biosynthesis is not well studied. Opium poppy BIA biosynthesis involves three cell types associated with the phloem system: companion cells, sieve elements, and laticifers. The transcripts and enzymes associated with BIA biosynthesis are distributed across cell types, requiring the translocation of key enzymes and pathway intermediates between cell types. Together, these suggest that the regulation of BIA biosynthesis in opium poppy is multilayered and complex, involving biochemical, genomic, and physiological mechanisms. In this review, we highlight recent advances in genome sequencing and single cell and spatial transcriptomics with a focus on how these efforts can improve our understanding of the genomic and cell-specific regulation of BIA biosynthesis. Such knowledge is vital for opium poppy genetic improvement and metabolic engineering efforts targeting the modulation of alkaloid yield and composition.

罂粟是一种极具商业价值的作物,是多种鸦片生物碱(包括吗啡、可待因、蒂巴因、莨菪碱和罂粟碱)的制药来源。参与罂粟中苄基异喹啉生物碱(BIAs)生物合成的大多数酶都已具有功能特征,目前罂粟是研究植物中 BIA 代谢的模型系统。罂粟中的 BIA 生物合成涉及两个生物合成基因簇,分别与吗啡和莨菪碱分支相关。最近的报告显示,同一基因簇中的基因是共同表达的,这表明它们也可能是共同调控的。然而,对罂粟 BIA 生物合成的转录调控还没有进行深入研究。罂粟 BIA 的生物合成涉及与韧皮部系统相关的三种细胞类型:伴细胞、筛分元件和叶状体。与 BIA 生物合成相关的转录本和酶分布在不同的细胞类型中,需要在细胞类型之间转运关键酶和途径中间产物。这些因素共同表明,罂粟中 BIA 生物合成的调控是多层次和复杂的,涉及生化、基因组和生理机制。在这篇综述中,我们将重点介绍基因组测序以及单细胞和空间转录组学的最新进展,并着重说明这些工作如何能提高我们对 BIA 生物合成的基因组和细胞特异性调控的认识。这些知识对于以调节生物碱产量和组成为目标的罂粟遗传改良和代谢工程工作至关重要。
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引用次数: 0
Identification of genes associated with sex expression and sex determination in hemp (Cannabis sativa L.). 鉴定大麻(Cannabis sativa L.)中与性别表达和性别决定相关的基因。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae429
Jiaqi Shi, Matteo Toscani, Caroline A Dowling, Susanne Schilling, Rainer Melzer

Dioecy in flowering plants has evolved independently many times, and thus the genetic mechanisms underlying sex determination are diverse. In hemp (Cannabis sativa), sex is controlled by a pair of sex chromosomes (XX for females and XY for males). In an attempt to understand the molecular mechanism responsible for sex expression in hemp plants, we carried out RNA sequencing of male and female plants at different developmental stages. Using a pipeline involving differential gene expression analysis and weighted gene co-expression network analysis, we identified genes important for male and female flower development. We also demonstrate that sex-biased expression is already established at very early vegetative stages, before the onset of reproductive development, and identify several genes encoding transcription factors of the REM, bZIP, and MADS families as candidate sex-determination genes in hemp. Our findings demonstrate that the gene regulatory networks governing male and female development in hemp diverge at a very early stage, leading to profound morphological differences between male and female hemp plants.

有花植物的雌雄异体经历了多次独立进化,因此性别决定的遗传机制也多种多样。在大麻(Cannabis sativa)中,性别由一对性染色体(雌性为 XX,雄性为 XY)控制。为了了解大麻植物性别表达的分子机制,我们对不同发育阶段的雌雄植物进行了 RNA 序列分析。通过差异基因表达分析和加权基因共表达网络分析,我们发现了对雌雄花发育很重要的基因。我们还证明,在生殖发育开始之前,性别偏向表达已经在很早的无性系阶段建立起来,而编码 REM、bZIP 和 MADS 家族转录因子的几个基因是大麻中候选的性别决定基因。我们的研究结果表明,管理大麻雌雄发育的基因调控网络在很早的阶段就已经出现分歧,从而导致雌雄大麻植株在形态上的深刻差异。
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引用次数: 0
Improving medicinal plant cultivation through in-depth understanding of environmental, physiological, metabolic, and genetic constraints. 通过深入了解环境、生理、代谢和遗传制约因素,改进药用植物栽培。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-01-01 DOI: 10.1093/jxb/erae463
Ricarda Jost, Susanne Schilling, Rainer Melzer
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引用次数: 0
Correction to: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 13 (SPL13) together with SPL9 redundantly regulates wax biosynthesis under drought stress. SQUAMOSA启动子结合蛋白样13 (SPL13)与SPL9一起冗余调控干旱胁迫下蜡的生物合成。
IF 5.6 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-31 DOI: 10.1093/jxb/erae505
{"title":"Correction to: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 13 (SPL13) together with SPL9 redundantly regulates wax biosynthesis under drought stress.","authors":"","doi":"10.1093/jxb/erae505","DOIUrl":"https://doi.org/10.1093/jxb/erae505","url":null,"abstract":"","PeriodicalId":15820,"journal":{"name":"Journal of Experimental Botany","volume":" ","pages":""},"PeriodicalIF":5.6,"publicationDate":"2024-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142909761","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Journal of Experimental Botany
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