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Eco-Evolutionary Optimality in Soil Organic Matter Models 土壤有机质模型的生态进化最优性
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-19 DOI: 10.1111/ele.70278
Erik Schwarz, Elsa Abs, Arjun Chakrawal, Luciana Chavez Rodriguez, Pierre Quévreux, Stefano Manzoni

Soil microorganisms mediate carbon and nutrient fluxes in soils, and—as all organisms—are subject to eco-evolutionary dynamics. Adaptation of soil microbial functionality to environmental conditions across space and time has consequences for biogeochemical fluxes that are often not explicitly considered in models describing soil organic matter (SOM) dynamics. Eco-evolutionary optimization (EEO) tries to anticipate the outcome of eco-evolutionary dynamics, and can inform on how microbial functional traits might adapt to environmental conditions based on the maximisation of different proxies of microbial fitness. While different approaches employ different fitness proxies, they all aim to increase realism and generality by grounding SOM models in eco-evolutionary theory and introducing constraints on model parametrization. Despite this potential, challenges for widely applying EEO approaches to advance SOM models persist and open questions remain, primarily concerning implicit assumptions, convergence of predictions, and empirical validation of the different EEO approaches. In this Synthesis, we review EEO approaches that have been applied to SOM models and provide an instructive primer to EEO approaches. We then propose a general categorization, aiming to make their underlying assumptions explicit and give an outlook for future research directions.

土壤微生物介导土壤中碳和养分的流动,并且与所有生物一样,受生态进化动力学的影响。土壤微生物功能对跨越空间和时间的环境条件的适应会对生物地球化学通量产生影响,而在描述土壤有机质(SOM)动力学的模型中往往没有明确考虑到这一点。生态进化优化(EEO)试图预测生态进化动态的结果,并可以根据微生物适应度的不同代理最大化来告知微生物功能性状如何适应环境条件。虽然不同的方法采用不同的适应度代理,但它们都旨在通过将SOM模型建立在生态进化理论中并引入模型参数化约束来增加现实性和通用性。尽管存在这种潜力,但广泛应用EEO方法来推进SOM模型的挑战仍然存在,并且仍然存在一些悬而未决的问题,主要涉及隐含假设、预测的收敛性以及不同EEO方法的经验验证。在本文中,我们回顾了应用于SOM模型的EEO方法,并为EEO方法提供了一个指导性的入门。然后,我们提出了一个总的分类,旨在明确他们的潜在假设,并对未来的研究方向进行了展望。
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引用次数: 0
Linking Climate and Demography to Predict Population Dynamics and Persistence Under Global Change 联系气候和人口预测全球变化下的人口动态和持久性
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-16 DOI: 10.1111/ele.70283
Jennifer L. Williams, Amy L. Angert, Aldo Compagnoni, Ali Campbell, Megan L. DeMarche, Margaret E. K. Evans, Joshua C. Fowler, Edgar J. González, Amy M. Iler, Jenna A. Loesberg, Allison M. Louthan, Alexandra B. Martin, Jacob K. Moutouama, Scott W. Nordstrom, William K. Petry, Bilgecan Şen, Seema N. Sheth, Tom E. X. Miller

Predicting the effects of climate change on plant and animal populations is an urgent challenge for understanding the fate of biodiversity under global change. At the surface, quantifying how climate drives the vital rates that underlie population dynamics appears simple, yet many decisions are required to connect climate to demographic data. Competing approaches have emerged in the literature with little consensus around best practices. Here we provide a practical guide for how to best link vital rates to climate for the purposes of inference and projection of population dynamics. We first describe the sources of demographic and climate data underlying population models. We then focus on best practices to model the relationships between vital rates and climate, highlighting what we can learn from mechanistic and phenomenological models. Finally, we discuss the challenges of prediction and forecasting in the face of uncertainty about climate-demographic relationships as well as future climate. We conclude by suggesting ways forward to build this field of research into one that makes robust forecasts of population persistence, with opportunities for synthesis across species.

预测气候变化对动植物种群的影响是了解全球变化下生物多样性命运的紧迫挑战。从表面上看,量化气候如何驱动构成人口动态的关键速率似乎很简单,但需要做出许多决定才能将气候与人口数据联系起来。文献中出现了相互竞争的方法,但对最佳实践几乎没有共识。在这里,我们提供了一个实用的指南,说明如何最好地将生命率与气候联系起来,以便推断和预测人口动态。我们首先描述了人口模型的人口和气候数据来源。然后,我们将重点放在模拟生命速率和气候之间关系的最佳实践上,强调我们可以从机械和现象学模型中学到什么。最后,我们讨论了在面对气候-人口关系以及未来气候的不确定性时预测和预报所面临的挑战。最后,我们提出了一些方法,将这一研究领域建设成为一个对种群持久性做出可靠预测的领域,并有机会跨物种进行综合。
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引用次数: 0
No Refuge at the Edge for European Beech as Climate Warming Disproportionately Reduces Masting at Colder Margins 气候变暖导致欧洲山毛榉在较冷的边缘地区不成比例地减少
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-12 DOI: 10.1111/ele.70284
Jessie J. Foest, Jakub Szymkowiak, Marcin K. Dyderski, Szymon Jastrzębowski, Hanna Fuchs, Ewelina Ratajczak, Andrew Hacket-Pain, Michał Bogdziewicz

Reproduction is vital for forest resilience under climate change, enabling tree populations to recover from disturbances and migrate. Yet projections of habitat suitability often overlook seed production. For European beech (Fagus sylvatica), viable seed production depends on year-to-year variability and synchrony in reproduction (masting). Using data from 341 sites (mean record: 31.7 years), we show that, especially in colder sites, increased frequency of the main reproductive cue is linked to strong declines in masting (CVp decline up to ~54%). This suggests that high latitudes and elevations offer no refuge, countering common assumptions and trends in other demographic processes. Severe disruptions to masting are projected to become the norm, with the greatest reductions (up to ~83%) at colder margins. Masting disruption may threaten forest regeneration and have far-reaching ecological impacts. Monitoring recruitment and testing adaptive forest management in vulnerable areas will be essential to mitigate reproductive constraints on forest resilience.

生殖对气候变化下的森林复原力至关重要,使树木种群能够从干扰中恢复并迁移。然而,对生境适宜性的预测往往忽略了种子产量。对于欧洲山毛榉(Fagus sylvatica)来说,种子产量取决于繁殖(育种)的年际变异性和同步性。利用来自341个地点(平均记录:31.7年)的数据,我们发现,特别是在较冷的地点,主要生殖线索的频率增加与密集性的强烈下降有关(CVp下降高达54%)。这表明高纬度和高海拔地区无法提供庇护,这与其他人口统计过程中的常见假设和趋势背道而驰。预计对桅杆的严重破坏将成为常态,在较冷的边缘,降幅最大(高达83%)。密集破坏可能威胁森林再生,并产生深远的生态影响。在脆弱地区监测森林招募和测试适应性森林管理对于减轻对森林恢复力的生殖限制至关重要。
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引用次数: 0
Shifts in Assembly Rules and Loss of Zooplankton Functional Diversity Across Hypereutrophic Fishponds 富营养化鱼塘中浮游动物功能多样性的丧失和组装规则的变化。
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70289
Cihelio A. Amorim, Martin J. Kainz

Freshwater species are facing massive declines, often driven by eutrophication. Identifying which facets of biodiversity are sensitive is crucial, as species loss does not always translate to reduced ecosystem functioning and functional diversity. We examined how assembly rules shape zooplankton functional diversity in hypereutrophic fishponds. Higher eutrophication was hypothesised to cause functional homogenization through reduced functional diversity, habitat filtering, and trait convergence. Higher eutrophication indeed reduced functional diversity metrics, whereas species richness was kept stable. Functional richness, dispersion, and dissimilarity shifted from limiting similarity, where niche partitioning and competition shape community structure, to random (incidence data) and habitat filtering (biomass) with increasing eutrophication. Functional divergence transitioned from random to habitat filtering, whereas redundancy increased at higher trophic states. Trait convergence was the dominant process, with the environment selecting species with similar traits. Biodiversity assessments and managers should consider how functional diversity and ecosystem functions respond to anthropogenic and environmental changes.

淡水物种正面临着大规模的减少,这通常是由富营养化造成的。确定生物多样性的哪些方面是敏感的是至关重要的,因为物种损失并不总是转化为生态系统功能和功能多样性的减少。我们研究了组装规则如何影响富营养化鱼塘中浮游动物的功能多样性。高富营养化被假设通过减少功能多样性、栖息地过滤和性状趋同导致功能同质化。高富营养化确实降低了功能多样性指标,而物种丰富度保持稳定。随着富营养化程度的增加,功能丰富度、分散度和差异性从有限相似性(生态位划分和竞争形成群落结构)转变为随机(发生率数据)和栖息地过滤(生物量)。功能分化由随机向生境过滤过渡,而冗余度在高营养状态下增加。性状趋同是优势过程,环境选择具有相似性状的物种。生物多样性评估和管理人员应考虑功能多样性和生态系统功能如何响应人为和环境变化。
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引用次数: 0
Crown Exposure Regulates Aboveground Wood Productivity Responses to Soil Fertility in Lowland Tropical Forests 热带低地森林树冠暴露调节地上部木材生产力对土壤肥力的响应。
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70280
José A. Medina-Vega, Álvaro Duque, Daniel Zuleta, Nicolás Castaño, Renato Valencia, Salomón Aguilar, David Mitre, Rolando Pérez, Shawn K. Y. Lum, David F. R. P. Burslem, Michael J. O'Brien, Glen Reynolds, Sarayudh Bunyavejchewin, Nantachai Pongpattananurak, Sangsan Phumsathan, Corneille E. N. Ewango, Jean-Remy M. Makana, Akira Itoh, Mohizah Bt. Mohamad, Sylvester Tan, Jill Thompson, María Uriarte, Jess K. Zimmerman, Alexandre A. de Oliveira, Ana C. S. de Andrade, João Batista da Silva, Alberto Vicentini, Warren Y. Brockelman, Anuttara Nathalang, Tze Leong Yao, Sisira Ediriweera, Vojtech Novotny, George D. Weiblen, Stuart J. Davies

Understanding the drivers of aboveground wood productivity (AWP) in tropical forests is crucial for explaining ecosystem functioning and predicting their responses to environmental change. While climatic water availability is a well-established driver, the role of soil nutrients and their interaction with other resources remains uncertain. We investigated how soil nutrients and light interactions shape AWP in lowland tropical forests using fine-scale soil and tree (≥ 1 cm DBH) data from 15 large forest plots. Canopy-exposed trees are nutrient-limited, with AWP increasing more with phosphorus (P) than with potassium (K), indicating P's greater role in plant growth and productivity. Conversely, understory AWP declined in fertile areas, likely due to intensified size-asymmetric competition. At the population level (mean across canopy layers), no relationship between soil nutrients and AWP emerged because contrasting responses among layers offset any overall association. Our results suggest that fine-scale heterogeneity and canopy stratification drive nutrient effects on tropical forest productivity.

了解热带森林地上木材生产力(AWP)的驱动因素对于解释生态系统功能和预测其对环境变化的响应至关重要。虽然气候水分供应是一个公认的驱动因素,但土壤养分的作用及其与其他资源的相互作用仍不确定。利用15个大型样地土壤和树木(≥1 cm DBH)的精细尺度数据,研究了土壤养分和光相互作用对热带低地森林AWP的影响。暴露于冠层的树木是营养有限的,AWP随磷(P)的增加大于钾(K)的增加,表明磷在植物生长和生产力中的作用更大。相反,肥沃地区林下植被AWP下降,可能是由于面积不对称竞争加剧。在种群水平上(冠层均值),土壤养分与AWP之间不存在相关性,因为各层之间的差异抵消了任何总体关联。我们的研究结果表明,细尺度异质性和冠层分层驱动着热带森林生产力的养分效应。
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引用次数: 0
Molecular Functional Diversity of Foliar Endophytic Fungi and Their Contributions to Seedling Survival in a Subtropical Forest 亚热带森林叶片内生真菌的分子功能多样性及其对幼苗存活的贡献
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70290
Baocai Han, Yunquan Wang, Sirong Zhang, Xiangcheng Mi, Lei Chen, Xiaojuan Liu, Keping Ma, Yu Liang

Plant-microbe interactions are critical in shaping forest dynamics, yet the molecular functions through which foliar endophytic fungi (FEF) influence seedling survival and coexistence remain unresolved. By combining FEF transcriptomics with seedling dynamics in a subtropical forest, we tested whether FEF molecular functions regulate seedling survival via host fitness differences and niche differentiation under modern coexistence theory. We found that FEF transcript diversity was strongly associated with host divergence time and maximum height, and FEF functions significantly enhanced seedling survival through fitness-related and niche-related processes. Among these FEF functions, gene ontology (GO) terms with high host-phylogeny dependence enhance seedling survival through fitness differences associated with multi-organism interactions, while those with high host-trait dependence enhance seedling survival through niche differentiation related to basic life processes. Our findings establish a bridge between microbial functional genomics and modern coexistence theory in natural forests.

植物与微生物的相互作用对森林动态的形成至关重要,但叶面内生真菌(FEF)影响幼苗生存和共存的分子功能仍未得到解决。通过将FEF转录组学与亚热带森林幼苗动态相结合,在现代共存理论下,我们验证了FEF分子功能是否通过寄主适合度差异和生态位分化来调节幼苗存活。结果表明,FEF转录本多样性与寄主分化时间和最大高度密切相关,FEF功能通过适应度和生态位相关过程显著提高幼苗成活率。在这些FEF功能中,具有高度寄主系统发育依赖性的基因本体(GO)术语通过与多生物相互作用相关的适应度差异来提高幼苗存活率,而具有高度寄主性状依赖性的基因本体(GO)术语通过与基本生命过程相关的生态位分化来提高幼苗存活率。我们的研究结果在天然森林微生物功能基因组学和现代共存理论之间建立了一座桥梁。
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引用次数: 0
Beyond Predators: Carnivores as Secondary Dispersers of Mycorrhizal Fungi 超越捕食者:作为菌根真菌次级传播者的食肉动物。
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70282
Ryan B. Stephens, Remington J. Moll, Amanda M. McGraw, Marcos V. Caiafa, Matthew E. Smith, Deahn M. Donner, Alexis R. Grinde, Michael J. Joyce

Primary dispersers of seeds and spores play critical roles in structuring the distributions of species, yet the role of predators as secondary dispersers remains largely unknown. This is especially true of mycorrhizal fungi, which often rely on small mammals to consume and disperse spores. We investigated how predator size, diet, and movement influence secondary spore dispersal in a terrestrial carnivore community by quantifying spore loads in scats (dispersal quantity) and integrating movement rates with gut passage time to determine dispersal distance (dispersal quality). Spores in carnivore scats increased with consumption of small mammals and transport of spores closely tracked home range movements. Larger carnivores deposited fewer spores but moved them farther from their source, creating a continuum between the quantity and quality of dispersal effectiveness. Our findings highlight the importance of carnivores as long-distance dispersers of mycorrhizal fungi and reveal how trophic interactions contribute to ecosystem functioning through secondary dispersal.

种子和孢子的初级传播者在物种的分布结构中起着至关重要的作用,然而捕食者作为次级传播者的作用在很大程度上仍然未知。菌根真菌尤其如此,它们通常依靠小型哺乳动物来消耗和传播孢子。我们研究了捕食者的大小、饮食和运动如何影响陆生食肉动物群落中次生孢子的传播,方法是量化粪便中的孢子负荷(传播量),并将运动速率与肠道通过时间结合起来确定传播距离(传播质量)。食肉动物粪便中的孢子随着对小型哺乳动物的消耗而增加,孢子的运输密切地追踪着它们的活动范围。较大的食肉动物沉积的孢子较少,但将它们移离它们的来源更远,从而在传播效果的数量和质量之间形成了一个连续体。我们的研究结果强调了食肉动物作为菌根真菌长距离传播者的重要性,并揭示了营养相互作用如何通过二次传播促进生态系统功能。
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引用次数: 0
The Range-Resident Logistic Model: A New Framework to Formalise the Population-Dynamics Consequences of Range Residency 范围-居住逻辑模型:一个形式化范围居住的人口动态后果的新框架
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70269
Rafael Menezes, Justin M. Calabrese, William F. Fagan, Paulo Inácio Prado, Ricardo Martinez-Garcia

Individual movement is critical in shaping population dynamics. However, existing frameworks linking these two processes often rely on unrealistic assumptions or numerical simulations. To address this gap, we introduce the range-resident logistic model, an easy-to-simulate and mathematically tractable extension of the spatial logistic model that incorporates empirically supported range-resident movement. Our framework unifies non-spatial and (sessile) spatial formulations of the logistic model as limiting cases. Between these regimes, the long-term population size depends nonlinearly on home-range size and spatial distribution. Neglecting range residency can hence lead to under- or overestimating population carrying capacity. To better understand these results, we also introduce a novel crowding index that depends on movement parameters and can be estimated from tracking data. This index captures the influence of spatial structure on population size, and serves as a robust predictor of abundance. The range-resident logistic model is thus a unifying framework bridging movement and population ecology.

个体的流动对人口动态的形成至关重要。然而,将这两个过程联系起来的现有框架往往依赖于不切实际的假设或数值模拟。为了解决这一差距,我们引入了范围驻留逻辑模型,这是一种易于模拟和数学上易于处理的空间逻辑模型的扩展,它包含了经验支持的范围驻留运动。我们的框架统一了逻辑模型的非空间和(不变的)空间公式作为极限情况。在这些制度之间,长期的种群规模取决于家园规模和空间分布的非线性。因此,忽略范围居住可能导致低估或高估种群承载能力。为了更好地理解这些结果,我们还引入了一种新的拥挤指数,该指数依赖于运动参数,可以从跟踪数据中估计。该指数反映了空间结构对种群规模的影响,并可作为丰度的可靠预测指标。因此,范围-居民logistic模型是一个连接运动和种群生态学的统一框架。
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引用次数: 0
Annual Temperature Range Drives Thermal Breadth of Freshwater Insects Across Multiple Spatial Scales 年温度变化驱动淡水昆虫在多个空间尺度的热宽度
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-11 DOI: 10.1111/ele.70288
Beatrice S. Dewenter, Darren P. Giling, Alisha A. Shah, Jane Hughes, N. LeRoy Poff, Cameron K. Ghalambor, W. Chris Funk, Stephanie Bristow, Ross M. Thompson, Ben J. Kefford

Thermal breadth (Tbr) is a critical trait influencing organisms' response to climate change. Three hypotheses seek to explain interspecific and interpopulation variation in Tbr, each relying on a different temperature driver: Climate Variability Hypothesis (CVH)–annual temperature range; Thermal Constraints Hypothesis (TCH)–mean annual temperature; and Diel Narrowing Hypothesis (DNH)–mean diel temperature range. We test these hypotheses by measuring the Tbr of freshwater insects (Ephemeroptera, Plecoptera and Trichoptera) along elevational gradients in the Americas and Australia, contrasting warm and cool adapted species from low climate variability tropical regions and high climate variability temperate regions. We find strong and consistent support for the CVH, limited support for the TCH (in two of four regions) and no support for the DNH. We conclude that Tbr of freshwater insects is better explained by annual temperature variability, rather than high temperatures or diel temperature variability.

热宽度(Tbr)是影响生物对气候变化响应的重要性状。三种假设试图解释Tbr的种间和种群间差异,每种假设都依赖于不同的温度驱动因素:气候变率假设(CVH)-年温度范围;热约束假说(TCH)—年平均温度;Diel窄化假说(DNH)- Diel平均温度范围。我们通过测量美洲和澳大利亚沿海拔梯度的淡水昆虫(蜉蝣目、翼翅目和毛翅目)的Tbr来验证这些假设,对比了来自低气候变率热带地区和高气候变率温带地区的温暖和凉爽适应物种。我们发现CVH得到了强有力和一致的支持,TCH得到了有限的支持(在四个地区中的两个),DNH没有得到支持。我们得出的结论是,淡水昆虫的Tbr更好地解释了年温度变化,而不是高温或昼夜温度变化。
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引用次数: 0
Human-Induced Downsizing of Animal Communities Weakens Trait Matching Between Tropical Plants and Frugivores 人类导致的动物群落缩小削弱了热带植物和食果动物之间的性状匹配。
IF 7.9 1区 环境科学与生态学 Q1 ECOLOGY Pub Date : 2025-12-10 DOI: 10.1111/ele.70274
Daniel Guerra, Andressa Cabral, Mariana Paetzolt, Evan Fricke, W. Daniel Kissling, Frederic Lens, Renske E. Onstein

Defaunation of large-bodied animals threatens essential ecosystem functions, such as seed dispersal. However, the consequences of this human-induced downsizing of animal communities for plant-frugivore trait matching—the alignment between frugivory-related plant traits (e.g., fruit size) and frugivore traits (e.g., body mass)—remain unquantified at macroecological scales. Here, we examine how human disturbance and environmental conditions influence trait matching in tropical plant-frugivore networks. We compiled fruit size data for 1927 plant species from primary sources, along with body mass and dietary information for 1120 frugivorous animal species (birds, mammals and reptiles), and integrated these with 12,708 plant-frugivore interactions recorded across 102 networks. Using fourth-corner analyses and structural equation models (SEMs), we quantified how human disturbance and environmental conditions directly and indirectly affected trait matching strength (fruit-size-to-body-mass correlation) across networks. SEMs revealed that human disturbance weakened trait matching by reducing the range of frugivore body masses within networks, whereas wet and productive environments promoted a higher proportion of fruit in frugivore diets, leading to stronger trait matching. Our results demonstrate that human disturbance weakens plant-frugivore trait matching through the downsizing of animal communities, thereby providing a quantitative assessment of the decoupling of coevolved relationships between fruiting plants and their animal seed dispersers.

大型动物的灭绝威胁到基本的生态系统功能,如种子传播。然而,在宏观生态尺度上,人类导致的动物群落缩小对植物-果食性性状匹配(果食性相关的植物性状(如果实大小)和果食性性状(如体重)之间的匹配)的影响仍然无法量化。在这里,我们研究了人类干扰和环境条件如何影响热带植物-水果网络的性状匹配。我们从主要来源收集了1927种植物的果实大小数据,以及1120种食果动物(鸟类、哺乳动物和爬行动物)的体重和饮食信息,并将这些数据与102个网络中记录的12,708种植物-食果动物相互作用进行了整合。利用四角分析和结构方程模型(sem),我们量化了人类干扰和环境条件如何直接和间接地影响性状匹配强度(果实大小-体重相关性)。研究表明,人为干扰通过减少网络中果实质量的范围来削弱性状匹配,而潮湿和多产的环境促进了果实在果实饮食中的比例增加,从而导致性状匹配更强。我们的研究结果表明,人类干扰通过动物群落的缩小削弱了植物-果食性性状的匹配,从而为果植物与其动物种子传播者之间的共同进化关系的解耦提供了定量评估。
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引用次数: 0
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Ecology Letters
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