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Involvement of FoVEL1 and FoLAE1 in conidiation, virulence and secondary metabolism of Fusarium oxysporum f. sp. Niveum FoVEL1 和 FoLAE1 参与 Fusarium oxysporum f. sp. Niveum 的分生、毒力和次生代谢
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-20 DOI: 10.1016/j.jia.2024.01.029
Yang Sun, Xuhuan Zhang, Zhenqin Chai, Yuying Li, Zheng Ren, Miaomiao Wang, Zhiqing Ma, Yong Wang, Juntao Feng

The velvet protein family plays a key factor in coordinating development and secondary metabolism in many pathogenic fungi. However, no previous research has investigated the function of the velvet protein family in Fusarium oxysporum f. sp. Niveum (FON), which causes a highly destructive disease on watermelon. In this study, ∆fovel1 and ∆folae1 deletion mutants and ∆fovel1-C and ∆folae1-C corresponding complementation mutants of FON were confirmed. Meanwhile, effects of phenotype, biochemistry and virulence of the deletion mutants were protected. Compared with the wild-type strains, the ∆fovel1 and ∆folae1 mutants showed different mycelia phenotype, depressed of conidiation and reduced production of bikaverin and fusaric acid. Moreover, their virulence on watermelon plant roots was significant decreased. In addition, all of these alterations in mutants were restored in corresponding complementation strains. Importantly, yeast two hybrid results indicated an interaction relationship between FoVel1 and FoLae1. The results of this study indicated that FoVEL1 and FoLAE1 play critical roles in secondary metabolisms, conidiation, and virulence in FON. These information will deepen our understanding on the genetic and functional roles of the VEL1 and LAE1 in pathogenic fungi.

绒毛蛋白家族在许多病原真菌的发育和次生代谢中起着关键的协调作用。然而,以前的研究还没有调查过绒毛蛋白家族在 Fusarium oxysporum f. sp. Niveum(FON)中的功能,FON 在西瓜上会引起一种破坏性很强的病害。本研究证实了 FON 的 ∆fovel1 和 ∆folae1 缺失突变体以及 ∆fovel1-C 和 ∆folae1-C 相应互补突变体。同时,对缺失突变体的表型、生化和毒力影响进行了保护。与野生型菌株相比,∆fovel1和∆ffolae1突变体表现出不同的菌丝表型,分生孢子抑制,bikaverin和fusaric acid产量减少。此外,它们对西瓜植株根部的毒力也明显下降。此外,突变体的所有这些变化在相应的互补株中都得到了恢复。重要的是,酵母双杂交结果表明 FoVel1 和 FoLae1 之间存在相互作用关系。本研究结果表明,FoVEL1 和 FoLAE1 在 FON 的次生代谢、分生孢子和毒力中起着关键作用。这些信息将加深我们对 VEL1 和 LAE1 在病原真菌中的遗传和功能作用的理解。
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引用次数: 0
The microbial community, nutrient supply and crop yields differ along a potassium fertilizer gradient under wheat–maize double-cropping systems 小麦-玉米双茬种植系统下的微生物群落、养分供应和作物产量在钾肥梯度上的差异
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-20 DOI: 10.1016/j.jia.2024.01.031
Zeli Li, Fuli Fang, Liang Wu, Feng Gao, Mingyang Li, Benhang Li, Kaidi Wu, Xiaomin Hu, Shuo Wang, Zhanbo Wei, Qi Chen, Min Zhang, Zhiguang Liu

Soil microorganisms play critical roles in ecosystem function. However, the relative impact of the potassium (K) fertilizer gradient on the microbial community in wheat‒maize double-cropping systems remains unclear. In this long-term field experiment (2008-2019), we researched bacterial and fungal diversity, composition, and community assemblage in the soil along a K fertilizer gradient (in the wheat season: K0, no K fertilizer; K1, 45 kg ha−1 K2O; K2, 90 kg ha−1 K2O; K3, 135 kg ha−1 K2O; and in the maize season: K0, no K fertilizer; K1, 150 kg ha−1 K2O; K2, 300 kg ha−1 K2O; K3, 450 kg ha−1 K2O) using bacterial 16S rRNA and fungal ITS data. We observed that environmental variables (such as mean annual soil temperature (MAT) and precipitation, available K, ammonium, nitrate, and organic matter) impacted the soil bacterial and fungal communities, and their impacts varied with fertilizer treatments and crop species. Furthermore, the relative abundance of bacteria involved in soil nutrient transformation (phylum Actinobacteria and class Alphaproteobacteria) in the wheat season was significantly increased compared to the maize season, and the optimal K fertilizer dosage (K2 treatment) boosted the relative bacterial abundance of soil nutrient transformation (genus Lactobacillus) and soil denitrification (phylum Proteobacteria) bacteria in the wheat season. The abundance of the soil bacterial community promoting root growth and nutrient absorption (genus Herbaspirillum) in the maize season was improved compared to the wheat season, and the K2 treatment enhanced the bacterial abundance of soil nutrient transformation (genus MND1) and soil nitrogen cycling (genus Nitrospira) genera in the maize season. The results indicated that the bacterial and fungal communities in the double-cropping system exhibited variable sensitivities and assembly mechanisms along a K fertilizer gradient, and microhabitats explained the largest amount of the variation in crop yields, and improved wheat‒maize yields by 11.2-22.6 and 9.2-23.8% with K addition, respectively. These modes are shaped contemporaneously by the different meteorological factors and soil nutrient changes in the K fertilizer gradients.

土壤微生物在生态系统功能中发挥着至关重要的作用。然而,钾肥梯度对小麦-玉米双季作业系统中微生物群落的相对影响仍不清楚。在这项长期田间试验(2008-2019 年)中,我们沿钾肥梯度研究了土壤中细菌和真菌的多样性、组成和群落组合(在小麦生长季节:K0,不施钾肥;K1,45 千克/公顷-1 K2O;K2,90 千克/公顷-1 K2O;K3,135 千克/公顷-1 K2O:K0,不施钾肥;K1,150 千克/公顷-1 K2O;K2,300 千克/公顷-1 K2O;K3,450 千克/公顷-1 K2O)。我们观察到,环境变量(如年平均土壤温度(MAT)和降水量、可利用的钾、铵、硝酸盐和有机质)对土壤细菌和真菌群落有影响,而且它们的影响随肥料处理和作物种类的不同而变化。此外,与玉米季相比,小麦季参与土壤养分转化的细菌(放线菌门和变形菌类)的相对丰度显著增加,最佳钾肥用量(K2 处理)提高了小麦季土壤养分转化细菌(乳酸杆菌属)和土壤反硝化细菌(蛋白细菌门)的相对丰度。与小麦季相比,玉米季促进根系生长和养分吸收的土壤细菌群落(Herbaspirillum 属)的丰度有所提高,K2 处理提高了玉米季土壤养分转化菌属(MND1 属)和土壤氮循环菌属(Nitrospira 属)的细菌丰度。结果表明,沿钾肥梯度,双季稻系统中的细菌和真菌群落表现出不同的敏感性和组装机制,微生境解释了作物产量的最大变化量,添加钾肥后,小麦-玉米产量分别提高了11.2-22.6%和9.2-23.8%。这些模式是由钾肥梯度中不同的气象因素和土壤养分变化同时形成的。
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引用次数: 0
TbNACα negatively regulates Trichoderma breve T069 synthesis of ethyl caffeate and enhances antagonism of Sclerotium rolfsii1 TbNACα 负向调节布氏毛霉 T069 咖啡酸乙酯的合成,并增强其对根瘤硬菌的拮抗作用1
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-20 DOI: 10.1016/j.jia.2024.01.030
Zhen Liu, Ning Xu, Jumei Hou, Tong Liu

The nascent polypeptide-associated complex (NAC) is involved in various biological functions in eukaryotes which have been extensively studied in animals and plants, but its role in the biocontrol action of microorganisms needs to be better understood. In this study, we investigated the function of TbNACα, one of the subunits of NAC, in the biocontrol activity of Trichoderma breve T069 against Sclerotium rolfsii. The TbNACα gene was deleted from T. breve T069, and the ΔTbNACα mutant showed significantly reduced mycelial growth, spore production, and spore germination. Additionally, volatile substances from ΔTbNACα had no significant effect on S. rolfsii, while non-volatile substances significantly inhibited the growth of S. rolfsii. Transcriptome sequencing results showed that compared to wild-type T069, the ΔTbNACα mutant had 3,398 differentially expressed genes, mainly regulating the expression of genes related to secondary metabolite biosynthetic enzymes, hydrolases, and membrane transport proteins. Untargeted metabolomics identified 50 upregulated metabolites (27 in positive ion mode and 23 in negative ion mode) in crude extracts from ΔTbNACα mutant metabolite broth. Moreover, the metabolic substances of ethyl caffeate had the strongest activity against S. rolfsii, with an EC50 of 107.15 μg·mL-1. Quantitative Real-time PCR (qPCR) analysis revealed that genes involved in the ethyl caffeate synthesis pathway were significantly upregulated in ΔTbNACα strains. This study provides a basis for the negative regulation of ethyl caffeate synthesis and elucidates the antagonistic inhibition mechanism of TbNACα in T. breve T069.

新生多肽相关复合物(NAC)参与真核生物的多种生物学功能,在动物和植物中已被广泛研究,但其在微生物的生物防治作用中的作用还有待进一步了解。在本研究中,我们研究了 TbNACα(NAC 的亚基之一)在毛霉菌 T069 对 Sclerotium rolfsii 的生物防治活性中的功能。T. breve T069 中的 TbNACα 基因被删除,ΔTbNACα 突变体的菌丝生长、孢子产生和孢子萌发均显著降低。此外,ΔTbNACα 的挥发性物质对 S. rolfsii 没有明显影响,而非挥发性物质则能明显抑制 S. rolfsii 的生长。转录组测序结果显示,与野生型 T069 相比,ΔTbNACα 突变体有 3,398 个差异表达基因,主要调控与次生代谢物生物合成酶、水解酶和膜转运蛋白相关的基因的表达。非靶向代谢组学在ΔTbNACα突变体代谢物肉汤的粗提取物中发现了50种上调代谢物(正离子模式27种,负离子模式23种)。此外,咖啡酸乙酯代谢物对 S. rolfsii 的活性最强,EC50 为 107.15 μg-mL-1。定量实时 PCR(qPCR)分析表明,参与咖啡酸乙酯合成途径的基因在 ΔTbNACα 菌株中显著上调。这项研究为咖啡酸乙酯合成的负调控提供了依据,并阐明了 TbNACα 在布氏杆菌 T069 中的拮抗抑制机制。
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引用次数: 0
Proteomic analysis revealed the function of PoElp3 in development, pathogenicity, and autophagy through the tRNA-mediated translation efficiency in the rice blast fungus1 蛋白质组分析揭示了 PoElp3 通过 tRNA 介导的翻译效率在稻瘟病真菌发育、致病性和自噬中的功能1
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-20 DOI: 10.1016/j.jia.2024.01.027
Yuanhao Liu, Ting Sun, Yuyong Li, Jianqiang Huang, Xianjun Wang, Huimin Bai, Jiayi Hu, Zifan Zhang, Shuai Wang, Dongmei Zhang, Xiuxiu Li, Zonghua Wang, Huakun Zheng, Guifang Lin

The Elongator complex is conserved in a wide range of species and plays crucial roles in diverse cellular processes. We have previously shown that the Elongator protein PoELp3 was involved in the asexual development, pathogenicity, and autophagy of the rice blast fungus. In this study, we further revealed that PoElp3 functions via tRNA-mediated protein integrity. Phenotypic analyses revealed that overexpression of two of the tRNAs, tK(UUU) and tQ(UUG) could rescue the defects in ΔPoelp3 strain. TMT-based proteomic and transcriptional analyses demonstrated that 386 proteins were down-regulated in ΔPoelp3 strain compared with wild type strain Guy11, in a transcription-independent manner. Codon usage assays revealed an enrichment of Glutamine CAA-biased mRNA in the 386 proteins compared with the 70-15 genome. In addition to those reported previously, we also found that PoErp9, a sphingolipid C9-methyltransferase, was down-regulated in the ΔPoelp3 strain. Through an ILV2-specific integration of PoERP9-GFP into the wild type and ΔPoelp3 strain, we were able to show that PoErp9 was positively regulated by PoElp3 translationally but not transcriptionally. Functional analyses revealed that PoErp9 was involved in the fungal growth, conidial development, pathogenicity, and TOR-related autophagy homeostasis in P. oryzae. Taken together, our results suggested that PoElp3 acts through the tRNA-mediated translational efficiency to regulate asexual development, pathogenicity, sphingolipid metabolism, and autophagy in the rice blast fungus.

伸长因子复合体在多种物种中都是保守的,并在多种细胞过程中发挥着关键作用。我们之前研究发现,Elongator 蛋白 PoELp3 参与了稻瘟病真菌的无性发育、致病性和自噬过程。在本研究中,我们进一步揭示了 PoElp3 通过 tRNA 介导的蛋白质完整性发挥作用。表型分析表明,tK(UUU)和tQ(UUG)这两种tRNA的过表达可以挽救ΔPoelp3菌株的缺陷。基于TMT的蛋白质组和转录分析表明,与野生型菌株Guy11相比,ΔPoelp3菌株中有386个蛋白质以转录无关的方式下调。密码子使用分析表明,与 70-15 基因组相比,386 个蛋白质中富含谷氨酰胺 CAA 偏基的 mRNA。除了之前报道的那些,我们还发现鞘脂 C9-甲基转移酶 PoErp9 在 ΔPoelp3 菌株中被下调。通过在野生型和ΔPoelp3菌株中整合ILV2特异性PoERP9-GFP,我们发现PoErp9受PoElp3的正向转录调控。功能分析显示,PoErp9参与了P. oryzae的真菌生长、分生孢子发育、致病性以及与TOR相关的自噬平衡。综上所述,我们的研究结果表明,PoElp3通过tRNA介导的翻译效率调控稻瘟病真菌的无性发育、致病性、鞘脂代谢和自噬。
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引用次数: 0
PDL1-dependent trans-acting siRNAs regulate lateral organ polarity development in rice 依赖于 PDL1 的反式作用 siRNA 调控水稻侧器官极性发育
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-17 DOI: 10.1016/j.jia.2024.01.025
Yi Zhang, Jing You, Jun Tang, Wenwen Xiao, Mi Wei, Ruhui Wu, Jinyan Liu, Hanying Zong, Shuoyu Zhang, Jie Qiu, Huan Chen, Yinghua Ling, Fangming Zhao, Yunfeng Li, Guanghua He, Ting Zhang

Leaves and glumes act as lateral organs and have essential effects on photosynthesis and seed morphology, thus affecting yield. However, the molecular mechanisms controlling their polarity development in rice is still worth further analysis. Here, we isolated a polarity defect of lateral organs 1 (pdl1) mutant in rice, which exhibits twisted/filamentous-shaped leaves and cracked/filamentous-shaped lemmas caused by defects in polarity development. PDL1 encodes a SUPPRESSOR OF GENE SILENCING 3 protein localized in the cytoplasm granules. PDL1 is expressed in the shoot apical meristem, inflorescence meristem, floral meristem, and lateral organs including leaf and floral organs. PDL1 is involved in the synthesis of tasiR-ARF, which may subsequently modulate the expression of OsARFs. Meanwhile, the expression of abaxial miR165/166 and the adaxial identity genes OSHBs was increased and decreased significantly, respectively. The results of this study clarified the molecular mechanism that the PDL1-mediated tasiR-ARF synthesis regulates the lateral organ polarity development in rice.

叶和颖片作为侧生器官,对光合作用和种子形态有重要影响,从而影响产量。然而,控制水稻叶和颖片极性发育的分子机制仍值得进一步分析。在此,我们分离了水稻侧生器官极性缺陷 1(pdl1)突变体,该突变体因极性发育缺陷而表现出扭曲/丝状叶片和开裂/丝状外稃。PDL1 编码一种定位于细胞质颗粒中的基因沉默抑制因子 3 蛋白。PDL1 在芽顶端分生组织、花序分生组织、花分生组织以及侧生器官(包括叶和花器官)中均有表达。PDL1 参与了 tasiR-ARF 的合成,随后可能调控 OsARFs 的表达。同时,背面 miR165/166 和正面特征基因 OSHBs 的表达分别显著增加和减少。该研究结果阐明了 PDL1 介导的 tasiR-ARF 合成调控水稻侧生器官极性发育的分子机制。
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引用次数: 0
GWAS analysis reveals candidate genes associated with dense tolerance (ear leaf structure) in maize (Zea mays L.) GWAS 分析揭示了与玉米(Zea mays L.)耐密性(穗叶结构)相关的候选基因
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-15 DOI: 10.1016/j.jia.2024.01.023
Chunxiang Li, Yongfeng Song, Yong Zhu, Mengna Cao, Xiao Han, Jinsheng Fan, Zhichao Lv, Yan Xu, Yu Zhou, Xing Zeng, Lin Zhang, Ling Dong, Dequan Sun, Zhenhua Wang, Hong Di

Planting density is a major limiting factor for maize yield, and breeding for density tolerance breeding has become an urgent issue. The leaf structure of the maize ear leaf is the main factor that restricts planting density and yield composition. In this study, a natural population of 201 maize inbred lines was used for genome-wide association analysis, which identified nine SNPs on chromosomes 2, 5, 8, 9, and 10 that were significantly associated with ear leaf type structure. Further verification through qRT-PCR confirmed the association of five candidate genes with these SNPs, with the Zm00001d008651 gene showing significant differential expression in compact and flat maize inbred lines. Enrichment analysis using the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) suggested that this gene is involved in the glycolysis process. The analysis of the basic properties of this gene revealed that it encodes a stable, basic protein consisting of 593 amino acids with some hydrophobic ability. The promoter region contains stress and hormone (ABA) related elements. The mutant of this gene increased the uppermost ear leaf angle (eLA) and the first leaf below the uppermost ear (bLA) by 4.96° and 0.97° compared with normal inbred lines. Overall, this research sheds light on the regulatory mechanism of ear and leaf structure that influence density tolerance and provides solid foundational work for the development of new varieties.

种植密度是玉米产量的主要限制因素,耐密育种已成为一个紧迫的问题。玉米穗叶的叶片结构是制约种植密度和产量构成的主要因素。本研究利用 201 个玉米近交系的自然群体进行了全基因组关联分析,发现 2、5、8、9 和 10 号染色体上的 9 个 SNP 与穗叶型结构显著相关。通过 qRT-PCR 进一步验证,确认了五个候选基因与这些 SNPs 的关联,其中 Zm00001d008651 基因在紧凑型和扁平型玉米近交系中表现出显著的差异表达。利用京都基因组百科全书(KEGG)和基因本体(GO)进行的富集分析表明,该基因参与糖酵解过程。对该基因基本特性的分析表明,该基因编码一种稳定的基本蛋白质,由 593 个氨基酸组成,具有一定的疏水性。启动子区域含有与胁迫和激素(ABA)相关的元件。该基因的突变体与正常近交系相比,最上穗叶角(eLA)和最上穗下第一叶角(bLA)分别增加了 4.96°和 0.97°。总之,该研究揭示了影响耐密性的穗叶结构调控机制,为新品种的研发提供了坚实的基础工作。
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引用次数: 0
Induced CTL-S15 gene expression by Bacillus thuringiensis declines susceptibility in Spodoptera exigua 苏云金芽孢杆菌诱导 CTL-S15 基因表达可降低 Spodoptera exigua 的易感性
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-15 DOI: 10.1016/j.jia.2024.01.024
Jianqiang Bao, Yuxuan Chen, Suwan Jiang, Rui Liu, Xi Zhang, Fangzheng Zhang, Zhiwei Chen, Chen Luo, Hailong Kong

It has been reported that C-type lectins (CTLs), which are pattern recognition receptors of the insect innate immunity response, may compete with Cry toxin for the receptor alkaline phosphatase to decrease its toxicity in insects. However, to date, which CTLs affect larval susceptibility to Bt in Spodoptera exigua is not clear. In this study, thirty-three CTL genes were identified from S. exigua. Based on the number of carbohydrate-recognition domains (CRDs) and the domain architectures, they were classified into three groups: (1) nineteen CTL-S (single-CRD), (2) eight immulectin (dual-CRD) and (3) six CTL-X (CRD with other domains). RT-qPCR analysis revealed that expression levels of SeCTL-S15, IML-4 and CTL-X6 were upregulated after challenge with Bt and Cry1Ab. Tissue and developmental stage expression analysis showed that only SeCTL-S15was mainly expressed in the midgut and larva, respectively. Knockdown of SeCTL-S15 significantly increased Bt susceptibility, as indicated by reduced survival and larval weight. These results suggest that CTL-S15 might play a vital role in the low susceptibility of larvae to Bt in S. exigua. Our results provide new insights into CTL function in insects.

据报道,作为昆虫先天免疫反应模式识别受体的 C 型凝集素(CTLs)可能会与 Cry 毒素竞争碱性磷酸酶受体,从而降低其对昆虫的毒性。然而,迄今为止,哪些 CTLs 会影响 Spodoptera exigua 幼虫对 Bt 的敏感性还不清楚。在这项研究中,从 S. exigua 中鉴定出了 33 个 CTL 基因。根据碳水化合物识别结构域(CRD)的数量和结构域的结构,将它们分为三组:(1) 19 个 CTL-S(单 CRD),(2) 8 个 immulectin(双 CRD)和 (3) 6 个 CTL-X(具有其他结构域的 CRD)。RT-qPCR 分析显示,SeCTL-S15、IML-4 和 CTL-X6 的表达水平在受到 Bt 和 Cry1Ab 挑战后上调。组织和发育阶段表达分析表明,只有 SeCTL-S15 主要分别在中肠和幼虫中表达。敲除 SeCTL-S15 会显著增加对 Bt 的敏感性,表现为存活率和幼虫体重的降低。这些结果表明,CTL-S15 可能在 S. exigua 幼虫对 Bt 的低敏感性中发挥了重要作用。我们的研究结果为了解 CTL 在昆虫中的功能提供了新的视角。
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引用次数: 0
Development of Gossypium hirsutum-Gossypium raimondii introgression lines and its usages in QTL mapping of agricultural traits 赫氏棉-苎麻引种系的开发及其在农业性状 QTL 图谱中的应用
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-14 DOI: 10.1016/j.jia.2024.01.016
Liang Wang, Nijiang Ai, Zechang Zhang, Chenhui Zhou, Guoli Feng, Sheng Cai, Ningshan Wang, Liuchun Feng, Yu Chen, Min Xu, Yingying Wang, Haoran Yue, Mengfei Chen, Liangshuai Xing, Baoliang Zhou

Gossypium raimondii (2n=2x=26, D5), an untapped wild species, is the putative progenitor of the D-subgenome of G. hirsutum (2n=4x=52, AD1), an extensively cultivated species. Here, we developed a G. hirsutum (recipient)-G. raimondii (donor) introgression population to exploit favorable QTLs/genes and mapped potential quantitative trait loci (QTLs) from wild cotton species. The introgression population consists of 256 lines with an introgression rate of 52.33% of the genome G. raimondii. The range of introgression segment length was 0.03-19.12 Mb, with an average of 1.22 Mb. The coverage of total introgression fragments was 386.98 Mb from G. raimondii. Further genome-wide association analysis (Q+K+MLM) and QTL mapping (RSTEP-LRT) identified 59 common QTLs, including 14 stable QTLs and 6 common QTL (co-QTL) clusters, and one hotspot of MIC. The common QTLs for seed index showed all positive additive effects, while the common QTLs for boll weight were all negative additive effects, indicating that the linkage between seed index and boll weight could be broken. QTLs for lint percentage showed positive effect and could be beneficial for improving cotton yield. Most QTLs for fiber quality had negative additive effects, implying these QTLs were domesticated/improved in G. hirsutum. A few fiber quality QTLs showed positive additive effects, which could be used to improve cotton fiber quality. These introgression lines developed would be useful for molecular marker-assisted breeding and facilitate us to map QTLs precisely for mining desirable genes from the wild species G. raimondii to improve cultivated cotton in future via a design-breeding approach.

Gossypium raimondii(2n=2x=26,D5)是一种尚未开发的野生物种,它可能是G. hirsutum(2n=4x=52,AD1)(一种广泛栽培的物种)D亚基因组的祖先。在此,我们开发了一个 G. hirsutum(受体)-G. raimondii(供体)引种群体,以利用有利的 QTLs/基因,并绘制了来自野生棉种的潜在数量性状位点(QTLs)。引种群体由 256 个品系组成,基因组 G. raimondii 的引种率为 52.33%。导入片段长度范围为 0.03-19.12 Mb,平均为 1.22 Mb。G. raimondii 的总引种片段覆盖率为 386.98 Mb。进一步的全基因组关联分析(Q+K+MLM)和 QTL 绘图(RSTEP-LRT)发现了 59 个共有 QTLs,包括 14 个稳定 QTLs 和 6 个共有 QTL(co-QTL)群,以及 1 个 MIC 热区。种子指数的共性 QTL 均为正加性效应,而棉铃重的共性 QTL 均为负加性效应,表明种子指数与棉铃重之间的联系可能被切断。皮棉率的 QTLs 显示了正效应,可能有利于提高棉花产量。大多数纤维质量 QTL 具有负加性效应,这意味着这些 QTL 在 G. hirsutum 中被驯化/改良。少数纤维质量 QTLs 显示出正的加性效应,可用于改善棉花纤维质量。开发的这些引种品系将有助于分子标记辅助育种,并有助于我们绘制精确的 QTLs 图,以便从野生种 G. raimondii 中挖掘理想基因,在未来通过设计育种方法改良栽培棉花。
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引用次数: 0
Errata regarding missing Ethical Statements in previously published articles: Part 5 关于以前发表的文章中缺少伦理声明的勘误:第 5 部分
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-14 DOI: 10.1016/j.jia.2024.01.022
Abstract not available
无摘要
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引用次数: 0
Errata regarding missing Ethical Statements in previously published articles: Part 2 关于以前发表的文章中缺少伦理声明的勘误:第 2 部分
IF 4.8 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-01-14 DOI: 10.1016/j.jia.2024.01.019
Abstract not available
无摘要
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引用次数: 0
期刊
Journal of Integrative Agriculture
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