Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A11
S. Lee, Si Jae Park
Introduction Historical Outline General Metabolic Pathways for the Synthesis of PHAs Production of SCL-MCL-PHAs by Wild-type Bacteria Production of SCL-MCL-PHAs by Metabolically Engineered Bacteria Biosynthesis of MCL- and SCL-MCL-PHAs in Recombinant E. coli Biosynthesis of MCL-PHAs and SCL-MCL-PHAs in Recombinant Pseudomonas sp. Biosynthesis of SCL-MCL-PHAs in Recombinant R. eutropha Outlook and Perspectives Patents Acknowledgments Keywords: polyhydroxyalkanoates; PHAs; Ralstonia eutropha; Pseudomonas sp.; metabolic engineering; recombinant Escherichia coli; PHA synthase; fatty acid biosynthesis; β-oxidation
{"title":"Biosynthesis and Fermentative Production of SCL and MCL Polyhydroxyalkanoates (SCL-MCL-PHAs)","authors":"S. Lee, Si Jae Park","doi":"10.1002/3527600035.BPOL3A11","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A11","url":null,"abstract":"Introduction \u0000Historical Outline \u0000General Metabolic Pathways for the Synthesis of PHAs \u0000Production of SCL-MCL-PHAs by Wild-type Bacteria \u0000Production of SCL-MCL-PHAs by Metabolically Engineered Bacteria \u0000Biosynthesis of MCL- and SCL-MCL-PHAs in Recombinant E. coli \u0000Biosynthesis of MCL-PHAs and SCL-MCL-PHAs in Recombinant Pseudomonas sp. \u0000Biosynthesis of SCL-MCL-PHAs in Recombinant R. eutropha \u0000 \u0000 \u0000Outlook and Perspectives \u0000Patents \u0000Acknowledgments \u0000 \u0000 \u0000Keywords: \u0000 \u0000polyhydroxyalkanoates; \u0000PHAs; \u0000Ralstonia eutropha; \u0000Pseudomonas sp.; \u0000metabolic engineering; \u0000recombinant Escherichia coli; \u0000PHA synthase; \u0000fatty acid biosynthesis; \u0000β-oxidation","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"107 17 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125084072","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A15
Y. Poirier, K. Gruys
Introduction Historical Perspective Synthesis of PHA in Plants Synthesis of Poly(3HB) in Arabidopsis thaliana Synthesis of Poly(3HB) in Other Plants Synthesis of Poly(3HB-co-3HV) Copolymer in Plants Synthesis of MCL-PHA in Plants Novel Uses for PHA in Plants PHA to Modify Fiber Properties PHA as a Feed Supplement PHA as a Tool to Study Plant Metabolic Pathways Patents on PHA in plants Perspective on PHA Production in Agricultural Crops Keywords: β-oxidation; Arabidopsis; corn; fatty acid; metabolic engineering; peroxisome; plastid; poly(3-hydroxybutyrate); polyester; polyhydroxyalkanoates; polyhydroxybutyrate; rapeseed; transgenic plants
{"title":"Production of Polyhydroxyalkanoates (PHAs) in Transgenic Plants","authors":"Y. Poirier, K. Gruys","doi":"10.1002/3527600035.BPOL3A15","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A15","url":null,"abstract":"Introduction \u0000Historical Perspective \u0000Synthesis of PHA in Plants \u0000Synthesis of Poly(3HB) in Arabidopsis thaliana \u0000Synthesis of Poly(3HB) in Other Plants \u0000Synthesis of Poly(3HB-co-3HV) Copolymer in Plants \u0000Synthesis of MCL-PHA in Plants \u0000 \u0000 \u0000Novel Uses for PHA in Plants \u0000PHA to Modify Fiber Properties \u0000PHA as a Feed Supplement \u0000PHA as a Tool to Study Plant Metabolic Pathways \u0000 \u0000 \u0000Patents on PHA in plants \u0000Perspective on PHA Production in Agricultural Crops \u0000 \u0000 \u0000Keywords: \u0000 \u0000β-oxidation; \u0000Arabidopsis; \u0000corn; \u0000fatty acid; \u0000metabolic engineering; \u0000peroxisome; \u0000plastid; \u0000poly(3-hydroxybutyrate); \u0000polyester; \u0000polyhydroxyalkanoates; \u0000polyhydroxybutyrate; \u0000rapeseed; \u0000transgenic plants","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"13 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123363185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A01
P. Kolattukudy
Introduction Historical Outline Occurrence and Ultrastructure of Cutin Isolation of Cutin Depolymerization of Cutin Chemical Depolymerization Enzymatic Depolymerization Monomer Composition of Cutin Structure of Cutin Biosynthesis of Cutin Biosynthesis of the C16 Family of Cutin Monomers Biosynthesis of the C18 Family of Cutin Monomers Synthesis of Cutin from Monomers Cutin Biodegradation Cutin Degradation in Plants Degradation of Cutin by Animals Cutin Degradation by Bacteria Fungal Degradation Function of Cutin Material Exchange with the Environment Low-temperature Adaptation Role of Cutin in the Interaction with Microbes Cutin Required for Proper Development of Plant Organs Potential Commercial Use for Cutin and Cutinase Outlook and Perspectives Patents Keywords: cutin; cuticle; cutinase; hydroxy fatty acids; epoxyfatty acids; biosynthesis; biodegradation; ω-hydroxylase; epoxidation; epoxide hydration; transcriptional regulation; cytochrome P450; esterification; lipase; fungal cutinase; bacterial cutinase; plant cutinase; environment; infection; O-glycosidic bonds; active serine; catalytic triad; nuclear magnetic resonance; mass spectrometry
{"title":"Cutin from Plants","authors":"P. Kolattukudy","doi":"10.1002/3527600035.BPOL3A01","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A01","url":null,"abstract":"Introduction \u0000Historical Outline \u0000Occurrence and Ultrastructure of Cutin \u0000Isolation of Cutin \u0000Depolymerization of Cutin \u0000Chemical Depolymerization \u0000Enzymatic Depolymerization \u0000 \u0000 \u0000Monomer Composition of Cutin \u0000Structure of Cutin \u0000Biosynthesis of Cutin \u0000Biosynthesis of the C16 Family of Cutin Monomers \u0000Biosynthesis of the C18 Family of Cutin Monomers \u0000Synthesis of Cutin from Monomers \u0000 \u0000 \u0000Cutin Biodegradation \u0000Cutin Degradation in Plants \u0000Degradation of Cutin by Animals \u0000Cutin Degradation by Bacteria \u0000Fungal Degradation \u0000 \u0000 \u0000Function of Cutin \u0000Material Exchange with the Environment \u0000Low-temperature Adaptation \u0000Role of Cutin in the Interaction with Microbes \u0000Cutin Required for Proper Development of Plant Organs \u0000 \u0000 \u0000Potential Commercial Use for Cutin and Cutinase \u0000Outlook and Perspectives \u0000Patents \u0000 \u0000 \u0000Keywords: \u0000 \u0000cutin; \u0000cuticle; \u0000cutinase; \u0000hydroxy fatty acids; \u0000epoxyfatty acids; \u0000biosynthesis; \u0000biodegradation; \u0000ω-hydroxylase; \u0000epoxidation; \u0000epoxide hydration; \u0000transcriptional regulation; \u0000cytochrome P450; \u0000esterification; \u0000lipase; \u0000fungal cutinase; \u0000bacterial cutinase; \u0000plant cutinase; \u0000environment; \u0000infection; \u0000O-glycosidic bonds; \u0000active serine; \u0000catalytic triad; \u0000nuclear magnetic resonance; \u0000mass spectrometry","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"78 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122449344","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A12
H. Satoh, T. Mino
Introduction Activated Sludge Processes Historical Outline Studies on PHA in Activated Sludge Microbial Studies Chemical Structure and its Occurrence Biochemistry of PHA Production by Activated Sludge PHA Production by PAOs under Anaerobic Conditions PHA Production by GAOs under Anaerobic Conditions Microbiologic and Genetic Aspects of PHA Accumulation by Activated Sludge Outlook and Perspectives Patents Keywords: activated sludge; polyhydroxyalkanoates; polyphosphate-accumulating organisms; glycogen-accumulating organisms; unculturable organisms; polyphosphate; glycogen; glycolysis; TCA cycle; 3HV fermentation; anaerobic-aerobic; microbial ecology; enhanced biological phosphorus removal
{"title":"Production of Polyhydroxyalkanoates from Activated Sludge","authors":"H. Satoh, T. Mino","doi":"10.1002/3527600035.BPOL3A12","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A12","url":null,"abstract":"Introduction \u0000Activated Sludge Processes \u0000 \u0000 \u0000Historical Outline \u0000Studies on PHA in Activated Sludge \u0000Microbial Studies \u0000 \u0000 \u0000Chemical Structure and its Occurrence \u0000Biochemistry of PHA Production by Activated Sludge \u0000PHA Production by PAOs under Anaerobic Conditions \u0000PHA Production by GAOs under Anaerobic Conditions \u0000 \u0000 \u0000Microbiologic and Genetic Aspects of PHA Accumulation by Activated Sludge \u0000Outlook and Perspectives \u0000Patents \u0000 \u0000 \u0000Keywords: \u0000 \u0000activated sludge; \u0000polyhydroxyalkanoates; \u0000polyphosphate-accumulating organisms; \u0000glycogen-accumulating organisms; \u0000unculturable organisms; \u0000polyphosphate; \u0000glycogen; \u0000glycolysis; \u0000TCA cycle; \u00003HV fermentation; \u0000anaerobic-aerobic; \u0000microbial ecology; \u0000enhanced biological phosphorus removal","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"53 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121156912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A08
S. Lee, S. Hong, Si Jae Park, R. V. Wegen, A. Middelberg
{"title":"Metabolic Flux Analysis on the Production of Poly(3‐hydroxybutyrate)","authors":"S. Lee, S. Hong, Si Jae Park, R. V. Wegen, A. Middelberg","doi":"10.1002/3527600035.BPOL3A08","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A08","url":null,"abstract":"","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"114 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124773676","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A09
S. Lee, Si Jae Park
Introduction Historical Outline Production of SCL-PHAs by Bacterial Fermentation Ralstonia eutropha Alcaligenes latus Other Bacteria Biosynthesis and Production of PHAs by Metabolically Engineered Bacteria Recombinant E. coli Recombinant R. eutropha Economic Considerations in the Production of SCL-PHAs by Bacterial Fermentation Outlook and Perspectives Patents Acknowledgments Keywords: polyhydroxyalkanoates; PHAs; Ralstonia eutropha; Alcaligenes latus; recombinant Escherichia coli; metabolic engineering; fermentation
{"title":"Fermentative Production of SCL Polyhydroxyalkanoates (SCL-PHAs)","authors":"S. Lee, Si Jae Park","doi":"10.1002/3527600035.BPOL3A09","DOIUrl":"https://doi.org/10.1002/3527600035.BPOL3A09","url":null,"abstract":"Introduction \u0000Historical Outline \u0000Production of SCL-PHAs by Bacterial Fermentation \u0000Ralstonia eutropha \u0000Alcaligenes latus \u0000Other Bacteria \u0000 \u0000 \u0000Biosynthesis and Production of PHAs by Metabolically Engineered Bacteria \u0000Recombinant E. coli \u0000Recombinant R. eutropha \u0000 \u0000 \u0000Economic Considerations in the Production of SCL-PHAs by Bacterial Fermentation \u0000Outlook and Perspectives \u0000Patents \u0000Acknowledgments \u0000 \u0000 \u0000Keywords: \u0000 \u0000polyhydroxyalkanoates; \u0000PHAs; \u0000Ralstonia eutropha; \u0000Alcaligenes latus; \u0000recombinant Escherichia coli; \u0000metabolic engineering; \u0000fermentation","PeriodicalId":165163,"journal":{"name":"Biopolymers Online","volume":"2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2002-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128999891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A02
P. Kolattukudy
Introduction Historical Outline Occurrence and Ultrastructure of Suberin Isolation of Suberized Cell Walls Chemical Composition of Suberin Aliphatic Components of Suberin Aromatic Components of Suberin Structure of Suberin Biosynthesis of Suberin Biosynthesis of Aliphatic Monomers Enzymatic Synthesis of the Aromatic Monomers of Suberin Synthesis of the Polymer from Monomers Degradation of Suberin Function of Suberin Potential Commercial Use for Suberin Outlook and Perspectives Patents Keywords: suberin; ω-hydroxy fatty acids; dicarbocylic acids; phenolics; chain elongation; ω-hydroxylation; ω-hydroxy acid dehydrogenase; cork; cell wall; lamellae; glycerol; cytochrome P450; abscisic acid; peroxidase; nuclear magnetic resonance; mass spectrometry; periderm; suberization; Casparian band; endodermis; cinnamic acid; phenylalanine: ammonia lyase; aromatic domain; aliphatic domain; crosspolarization magic angle spin; biosynthesis; fatty alcohols; biodegradation; diffusion resistance
Pub Date : 2002-11-29DOI: 10.1002/3527600035.BPOL3A13
Shiming Zhang, R. Lenz, S. Goodwin
Introduction Historical Outline Characterization of PHA Synthase Activity Isolation and Activity of Soluble PHA Synthase Properties of PHA Synthases Lag Phase in Polymerization Reaction Elimination of Lag Phase Substrate Specificity Mechanism of Polymerization Reaction In vitro Polymerization of HACoA Monomers Control of Polymer Properties New Types of PHAs Diversity of PHA Synthases CoA Recycling Systems Patents Outlook and Perspectives Keywords: synthase; polymerase; PHA synthase; PHA polymerase; in vitro polymerization; bacterial synthase; enzymatic polymerization; in vitro synthesis of PHA
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