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Correction to: Training the next generation of pharmacometric modelers: a multisector perspective. 更正:培训下一代药物计量学建模人员:多部门视角。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 DOI: 10.1007/s10928-023-09885-5
Peter L Bonate, Jeffrey S Barrett, Sihem Ait-Oudhia, Richard Brundage, Brian Corrigan, Stephen Duffull, Marc Gastonguay, Mats O Karlsson, Shinichi Kijima, Andreas Krause, Mark Lovern, Matthew M Riggs, Michael Neely, Daniele Ouellet, Elodie L Plan, Gauri G Rao, Joseph Standing, Justin Wilkins, Hao Zhu
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引用次数: 0
Characterization of anti-drug antibody dynamics using a bivariate mixed hidden-markov model by nonlinear-mixed effects approach. 通过非线性混合效应方法,使用双变量混合隐马尔可夫模型表征抗药物抗体动力学。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 Epub Date: 2023-11-09 DOI: 10.1007/s10928-023-09890-8
Ari Brekkan, Rocío Lledo-Garcia, Brigitte Lacroix, Siv Jönsson, Mats O Karlsson, Elodie L Plan

Biological therapies may act as immunogenic triggers leading to the formation of anti-drug antibodies (ADAs). Population pharmacokinetic (PK) models can be used to characterize the relationship between ADA and drug disposition but often rely on the ADA bioassay results, which may not be sufficiently sensitive to inform on this characterization.In this work, a methodology that could help to further elucidate the underlying ADA production and impact on the drug disposition was explored. A mixed hidden-Markov model (MHMM) was developed to characterize the underlying (hidden) formation of ADA against the biologic, using certolizumab pegol (CZP), as a test drug. CZP is a PEGylated Fc free TNF-inhibitor used in the treatment of rheumatoid arthritis and other chronic inflammatory diseases.The bivariate MHMM used information from plasma drug concentrations and ADA measurements, from six clinical studies (n = 845), that were correlated through a bivariate Gaussian function to infer about two hidden states; production and no-production of ADA influencing PK. Estimation of inter-individual variability was not supported in this case. Parameters associated with the observed part of the model were reasonably well estimated while parameters associated with the hidden part were less precise. Individual state sequences obtained using a Viterbi algorithm suggested that the model was able to determine the start of ADA production for each individual, being a more assay-independent methodology than traditional population PK. The model serves as a basis for identification of covariates influencing the ADA formation, and thus has the potential to identify aspects that minimize its impact on PK and/or efficacy.

生物疗法可以作为免疫原性触发因素,导致抗药物抗体(ADAs)的形成。群体药代动力学(PK)模型可用于表征ADA和药物处置之间的关系,但通常依赖于ADA生物测定结果,该结果可能不够敏感,无法告知该表征。在这项工作中,探索了一种有助于进一步阐明潜在ADA产生及其对药物处置的影响的方法。使用塞妥珠单抗聚乙二醇(CZP)作为试验药物,开发了一种混合隐马尔可夫模型(MHMM)来表征ADA对生物的潜在(隐藏)形成。CZP是一种聚乙二醇化的不含Fc的TNF抑制剂,用于治疗类风湿性关节炎和其他慢性炎症性疾病。双变量MHMM使用了来自六项临床研究(n = 845),它们通过二元高斯函数相关以推断大约两个隐藏状态;ADA的产生和没有产生影响PK。在这种情况下,个体间变异性的估计不受支持。与模型的观察部分相关的参数被合理地很好地估计,而与隐藏部分有关的参数则不那么精确。使用Viterbi算法获得的个体状态序列表明,该模型能够确定每个个体ADA产生的开始,是一种比传统群体PK更独立于测定的方法。该模型是识别影响ADA形成的协变量的基础,并且因此具有识别将其对PK和/或疗效的影响最小化的方面的潜力。
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引用次数: 0
Training the next generation of pharmacometric modelers: a multisector perspective. 培训下一代药物计量学建模人员:多部门视角。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 Epub Date: 2023-08-13 DOI: 10.1007/s10928-023-09878-4
Peter L Bonate, Jeffrey S Barrett, Sihem Ait-Oudhia, Richard Brundage, Brian Corrigan, Stephen Duffull, Marc Gastonguay, Mats O Karlsson, Shinichi Kijima, Andreas Krause, Mark Lovern, Matthew M Riggs, Michael Neely, Daniele Ouellet, Elodie L Plan, Gauri G Rao, Joseph Standing, Justin Wilkins, Hao Zhu

The current demand for pharmacometricians outmatches the supply provided by academic institutions and considerable investments are made to develop the competencies of these scientists on-the-job. Even with the observed increase in academic programs related to pharmacometrics, this need is unlikely to change in the foreseeable future, as the demand and scope of pharmacometrics applications keep expanding. Further, the field of pharmacometrics is changing. The field largely started when Lewis Sheiner and Stuart Beal published their seminal papers on population pharmacokinetics in the late 1970's and early 1980's and has continued to grow in impact and use since its inception. Physiological-based pharmacokinetics and systems pharmacology have grown rapidly in scope and impact in the last decade and machine learning is just on the horizon. While all these methodologies are categorized as pharmacometrics, no one person can be an expert in everything. So how do you train future pharmacometricians? Leading experts in academia, industry, contract research organizations, clinical medicine, and regulatory gave their opinions on how to best train future pharmacometricians. Their opinions were collected and synthesized to create some general recommendations.

目前对药物计量学人员的需求超过了学术机构的供应量,因此需要大量投资来培养这些科学家的在职能力。即使药物计量学相关的学术课程有所增加,这种需求在可预见的未来也不太可能改变,因为药物计量学的需求和应用范围在不断扩大。此外,药物计量学领域也在不断变化。该领域主要始于 Lewis Sheiner 和 Stuart Beal 在 20 世纪 70 年代末和 80 年代初发表的关于群体药物动力学的开创性论文,自诞生以来,其影响和应用不断扩大。在过去十年中,基于生理的药代动力学和系统药理学在范围和影响上都得到了迅速发展,而机器学习则刚刚起步。虽然所有这些方法都被归类为药物计量学,但没有一个人可以成为所有方面的专家。那么,如何培养未来的药物计量学专家呢?学术界、工业界、合同研究组织、临床医学和监管部门的顶尖专家就如何最好地培训未来的药物计量学家发表了自己的意见。我们收集并综合了他们的意见,提出了一些一般性建议。
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引用次数: 0
Thoughts on plagiarism and the case against Claudine Gay. 关于剽窃和克劳迪娜-盖伊案件的思考。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 DOI: 10.1007/s10928-024-09904-z
Peter L Bonate
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引用次数: 0
Correction to: Classical structural identifiability methodology applied to low-dimensional dynamic systems in receptor theory. 更正:经典结构可识别性方法应用于受体理论中的低维动态系统。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 DOI: 10.1007/s10928-023-09879-3
Carla White, Vivi Rottschäfer, Lloyd Bridge
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引用次数: 0
Correction: External control arms for rare diseases: building a body of supporting evidence. 更正:罕见疾病的外部控制臂:建立支持证据库。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 DOI: 10.1007/s10928-024-09900-3
Artak Khachatryan, Stephanie H Read, Terri Madison
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引用次数: 0
Classical structural identifiability methodology applied to low-dimensional dynamic systems in receptor theory. 将经典的结构可识别性方法应用于受体理论中的低维动态系统。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2024-02-01 Epub Date: 2023-06-30 DOI: 10.1007/s10928-023-09870-y
Carla White, Vivi Rottschäfer, Lloyd Bridge

Mathematical modelling has become a key tool in pharmacological analysis, towards understanding dynamics of cell signalling and quantifying ligand-receptor interactions. Ordinary differential equation (ODE) models in receptor theory may be used to parameterise such interactions using timecourse data, but attention needs to be paid to the theoretical identifiability of the parameters of interest. Identifiability analysis is an often overlooked step in many bio-modelling works. In this paper we introduce structural identifiability analysis (SIA) to the field of receptor theory by applying three classical SIA methods (transfer function, Taylor Series and similarity transformation) to ligand-receptor binding models of biological importance (single ligand and Motulsky-Mahan competition binding at monomers, and a recently presented model of a single ligand binding at receptor dimers). New results are obtained which indicate the identifiable parameters for a single timecourse for Motulsky-Mahan binding and dimerised receptor binding. Importantly, we further consider combinations of experiments which may be performed to overcome issues of non-identifiability, to ensure the practical applicability of the work. The three SIA methods are demonstrated through a tutorial-style approach, using detailed calculations, which show the methods to be tractable for the low-dimensional ODE models.

数学模型已成为药理学分析的重要工具,可用于了解细胞信号的动态和量化配体与受体的相互作用。受体理论中的常微分方程(ODE)模型可用于利用时程数据对这种相互作用进行参数化,但需要注意相关参数的理论可识别性。在许多生物建模工作中,可识别性分析往往是一个被忽视的步骤。在本文中,我们将结构可识别性分析(SIA)引入受体理论领域,将三种经典的 SIA 方法(传递函数、泰勒级数和相似性变换)应用于具有重要生物学意义的配体-受体结合模型(单体上的单配体和莫图尔斯基-马汉竞争结合,以及最近提出的受体二聚体上的单配体结合模型)。我们获得的新结果表明了莫图尔斯基-马汉结合和二聚受体结合的单一时间历程的可识别参数。重要的是,我们进一步考虑了为克服不可识别性问题而可能进行的实验组合,以确保这项工作的实际应用性。我们通过教程式的方法演示了三种 SIA 方法,并进行了详细计算,结果表明这些方法对于低维 ODE 模型是可行的。
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引用次数: 0
Special issue: Model-informed drug development in rare diseases: connecting the dots in an information rich ecosystem. 特刊:基于模型的罕见疾病药物开发:在信息丰富的生态系统中连接各个点。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-12-01 Epub Date: 2023-04-27 DOI: 10.1007/s10928-023-09862-y
Rajesh Krishna
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引用次数: 0
Rare oncology therapeutics: review of clinical pharmacology package of drug approvals (2019-2023) by US FDA, best practices and recommendations. 罕见肿瘤治疗学:美国食品药品监督管理局对临床药理学药物批准包(2019-2023)的审查、最佳实践和建议。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-12-01 Epub Date: 2023-11-04 DOI: 10.1007/s10928-023-09896-2
Amitava Mitra, Jong Bong Lee, Douglas Steinbach, Anasuya Hazra, Rajesh Krishna

There are many challenges with rare diseases drug development and rare oncology indications are not different. To understand the regulatory landscape as it relates to application of clinical pharmacology principles in rare oncology product development, we reviewed publicly available information of 39 approvals by US FDA between January 2019 and March 2023. The objective was to understand the expected clinical pharmacology studies and knowledge base in such approvals. Model informed drug development (MIDD) applications were also reviewed, as such approaches are expected to play a critical role in filling clinical pharmacology gaps in rare oncology, where number of clinical trials and size of these trials will perhaps continue to be small. The findings highlighted how clinical pharmacology contributed to the evidence of effectiveness, dose optimization and elucidation of intrinsic and extrinsic factors affecting drug's behavior. Clinical pharmacology studies were often integrated with modeling in many of the NDAs/BLAs. Of the post marketing requirements (PMR) received, 18% were for dose optimization, 49% for DDI, 8% for QTc, 49% for specific population, and 5% for food effect. Two post marketing commitments (PMC) were issued for immunogenicity of the 11 biologics submissions. 15% (6 of 39) of the submissions used maximum tolerated dose (MTD) to advance their molecule into Phase 2 studies. Of them 3 approvals received PMR for dose optimization. 3 + 3 was the most prevalent Phase 1 design with use in 74% of the New Drug Applications (NDA)/Biologic License Applications (BLA) reviewed. Rest used innovative approaches such as BLRM, BOIN or mTPi, with BLRM being the most common. Seamless clinical pharmacology and MIDD approaches are paramount for rare oncology drug development.

罕见病药物开发面临许多挑战,罕见肿瘤适应症也没有什么不同。为了了解与临床药理学原理在罕见肿瘤产品开发中的应用有关的监管格局,我们审查了2019年1月至2023年3月期间美国食品药品监督管理局39项批准的公开信息。目的是了解此类批准中预期的临床药理学研究和知识库。还对模型知情药物开发(MIDD)的应用进行了审查,因为这些方法有望在填补罕见肿瘤学的临床药理学空白方面发挥关键作用,在罕见肿瘤学中,临床试验的数量和规模可能会继续很小。研究结果强调了临床药理学如何有助于证明有效性、剂量优化以及阐明影响药物行为的内在和外在因素。临床药理学研究经常与许多NDA/BLA的建模相结合。在收到的上市后需求(PMR)中,18%用于剂量优化,49%用于DDI,8%用于QTc,49%用于特定人群,5%用于食物效果。针对提交的11种生物制品的免疫原性,发布了两项上市后承诺(PMC)。15%(39份中的6份)的提交材料使用最大耐受剂量(MTD)将其分子推进2期研究。其中3项批准获得了用于剂量优化的PMR。3. + 3是最普遍的1期设计,在审查的新药申请(NDA)/生物许可证申请(BLA)中使用了74%。Rest使用了创新方法,如BLRM、BOIN或mTPi,其中BLRM是最常见的。无缝的临床药理学和MIDD方法对于罕见肿瘤药物的开发至关重要。
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引用次数: 0
Population pharmacokinetic modeling and dosing simulation of avalglucosidase alfa for selecting alternative dosing regimen in pediatric patients with late-onset pompe disease. 儿童迟发性庞贝病患者avalalglucosidase alfa的人群药代动力学建模和给药模拟选择替代给药方案。
IF 2.5 4区 医学 Q3 PHARMACOLOGY & PHARMACY Pub Date : 2023-12-01 Epub Date: 2023-08-03 DOI: 10.1007/s10928-023-09874-8
Gilles Tiraboschi, David Marchionni, Gilles Tuffal, David Fabre, Jean-Marie Martinez, Kristina An Haack, Patrick Miossec, Barbara Kittner, Nadia Daba, Fabrice Hurbin

Avalglucosidase alfa (AVAL) was approved in the United States (2021) for patients with late-onset Pompe disease (LOPD), aged ≥ 1 year. In the present study, pharmacokinetic (PK) simulations were conducted to propose alternative dosing regimens for pediatric LOPD patients based on a bodyweight cut-off. Population PK (PopPK) analysis was performed using nonlinear mixed effect modeling approach on pooled data from three clinical trials with LOPD patients, and a phase 2 study (NCT03019406) with infantile-onset Pompe disease (IOPD: 1-12 years) patients. A total of 2257 concentration-time points from 91 patients (LOPD, n = 75; IOPD, n = 16) were included in the analysis. The model was bodyweight dependent allometric scaling with time varying bodyweight included on clearance and distribution volume. Simulations were performed for two dosing regimens (20 mg/kg or 40 mg/kg) with different bodyweight cut-off (25, 30, 35 and 40 kg) by generating virtual pediatric (1-17 years) and adult patients. Corresponding simulated individual exposures (maximal concentration, Cmax and area under the curve in the 2-week dosing interval, AUC2W), and distributions were calculated. It was found that dosing of 40 mg/kg and 20 mg/kg in pediatric patients < 30 kg and ≥ 30 kg, respectively, achieved similar AVAL exposure (based on AUC2W) to adult patients receiving 20 mg/kg. PK simulations conducted on the basis of this model provided supporting data for the currently approved US labelling for dosing adapted bodyweight in LOPD patients ≥ 1 year by USFDA.

Avalglucosidase alfa (AVAL)于2021年在美国被批准用于治疗年龄≥1岁的晚发型庞贝病(LOPD)患者。在本研究中,进行药代动力学(PK)模拟,以体重为基础提出儿科LOPD患者的替代给药方案。人群PK (PopPK)分析采用非线性混合效应建模方法,对来自三个LOPD患者的临床试验和一个婴儿发病Pompe病(IOPD: 1-12岁)患者的2期研究(NCT03019406)的汇总数据进行分析。91例患者共2257个浓度时间点(LOPD, n = 75;IOPD, n = 16)纳入分析。该模型是体重依赖的异速尺度,随时间变化的体重包括间隙和分布体积。通过生成虚拟儿科(1-17岁)和成人患者,对不同体重临界值(25、30、35和40 kg)的两种给药方案(20 mg/kg或40 mg/kg)进行了模拟。计算相应的模拟个体暴露(2周给药间隔内的最大浓度、Cmax和曲线下面积AUC2W)及其分布。发现40 mg/kg和20 mg/kg儿科患者的剂量比20 mg/kg成人患者的剂量低。基于该模型进行的PK模拟为美国fda目前批准的LOPD≥1年患者给药适应体重标签提供了支持数据。
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引用次数: 0
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Journal of Pharmacokinetics and Pharmacodynamics
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