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Diagnostic application in streptozotocin‐induced diabetic retinopathy rats: A study based on Raman spectroscopy and machine learning 链脲佐菌素诱导的糖尿病视网膜病变大鼠的诊断应用:基于拉曼光谱和机器学习的研究
IF 2.8 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-06-22 DOI: 10.1002/jbio.202400115
Kunhong Xiao, Li Li, Yang Chen, Rong Lin, Boyuan Wen, Zhiqiang Wang, Yan Huang
Vision impairment caused by diabetic retinopathy (DR) is often irreversible, making early‐stage diagnosis imperative. Raman spectroscopy emerges as a powerful tool, capable of providing molecular fingerprints of tissues. This study employs RS to detect ex vivo retinal tissue from diabetic rats at various stages of the disease. Transmission electron microscopy was utilized to reveal the ultrastructural changes in retinal tissue. Following spectral preprocessing of the acquired data, the random forest and orthogonal partial least squares‐discriminant analysis algorithms were employed for spectral data analysis. The entirety of Raman spectra and all annotated bands accurately and distinctly differentiate all animal groups, and can identify significant molecules from the spectral data. Bands at 524, 1335, 543, and 435 cm−1 were found to be associated with the preproliferative phase of DR. Bands at 1045 and 1335 cm−1 were found to be associated with early stages of DR.
糖尿病视网膜病变(DR)造成的视力损害往往是不可逆的,因此早期诊断势在必行。拉曼光谱是一种强大的工具,能够提供组织的分子指纹。本研究利用拉曼光谱检测糖尿病大鼠不同阶段的体外视网膜组织。透射电子显微镜用于揭示视网膜组织的超微结构变化。对获取的数据进行光谱预处理后,采用随机森林和正交偏最小二乘判别分析算法进行光谱数据分析。整个拉曼光谱和所有注释波段都能准确、清晰地区分所有动物组别,并能从光谱数据中识别出重要的分子。研究发现,524、1335、543 和 435 cm-1 处的条带与 DR 的增殖前阶段有关。1045 和 1335 cm-1 处的波段与 DR 的早期阶段有关。
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引用次数: 0
Probing polarization response of monolayer cell cultures with entangled photon pairs 用纠缠光子对探测单层细胞培养物的偏振响应
IF 2.8 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-06-22 DOI: 10.1002/jbio.202400018
L. Zhang, V. R. Besaga, P. Rühl, C. Zou, S. H. Heinemann, Y. Wang, F. Setzpfandt
This study addresses the critical need for high signal‐to‐noise ratio in optical detection methods for biological sample discrimination under low‐photon‐flux conditions to ensure accuracy without compromising sample integrity. We explore polarization‐based probing, which often excels over intensity modulation when assessing a specimen's morphology. Leveraging non‐classical light sources, our approach capitalizes on sub‐Poissonian photon statistics and quantum correlation‐based measurements. We present a novel, highly sensitive method for probing single‐layer cell cultures using entangled photon pairs. Our approach demonstrates potential for monolayer cell analysis, distinguishing between two types of monolayer cells and their host medium. The experimental results highlight our method's sensitivity, showcasing its potential for biological sample detection using quantum techniques, and paving the way for advanced diagnostic methodologies.
本研究探讨了在低光子通量条件下生物样本鉴别光学检测方法对高信噪比的关键需求,以确保准确性,同时不影响样本的完整性。我们探索了基于偏振的探测方法,这种方法在评估标本形态时往往优于强度调制。借助非经典光源,我们的方法利用了亚泊松子光子统计和基于量子相关性的测量。我们提出了一种利用纠缠光子对探测单层细胞培养物的新型高灵敏度方法。我们的方法展示了单层细胞分析的潜力,可以区分两种类型的单层细胞及其宿主培养基。实验结果凸显了我们方法的灵敏度,展示了利用量子技术检测生物样本的潜力,并为先进的诊断方法铺平了道路。
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引用次数: 0
Selective induction of senescence in cancer cells through near‐infrared light treatment via mitochondrial modulation 通过线粒体调控近红外光处理选择性诱导癌细胞衰老
IF 2.8 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-06-22 DOI: 10.1002/jbio.202400046
I. Kalampouka, R. R. Mould, S. W. Botchway, A. M. Mackenzie, A. V. Nunn, E. L. Thomas, J. D. Bell
Photobiomodulation, utilising non‐ionising light in the visible and near‐infrared (NIR) spectrum, has been suggested as a potential method for enhancing tissue repair, reducing inflammation and possibly mitigating cancer‐therapy‐associated side effects. NIR light is suggested to be absorbed intracellularly, mainly by chromophores within the mitochondria. This study examines the impact of 734 nm NIR light on cellular senescence. Cancer (MCF7 and A549) and non‐cancer (MCF10A and IMR‐90) cell populations were subjected to 63 mJ/cm2 NIR‐light exposure for 6 days. Senescence levels were quantified by measuring active senescence‐associated beta‐galactosidase. Exposure to NIR light significantly increases senescence levels in cancer (10.0%–203.2%) but not in non‐cancer cells (p > 0.05). Changes in senescence were associated with significant modulation of mitochondrial homeostasis, including increased levels of reactive oxygen species (p < 0.05) and mitochondrial membrane potential (p < 0.05) post‐NIR‐light treatment. These results suggest that NIR light modulates cellular chemistry, arresting the proliferation of cancer cells via senescence induction while sparing non‐cancer cells.
利用可见光和近红外(NIR)光谱中的非电离光进行光生物调节,已被认为是一种潜在的方法,可用于加强组织修复、减少炎症反应,并可能减轻癌症治疗相关的副作用。近红外线被认为可在细胞内被吸收,主要是被线粒体内的发色团吸收。本研究探讨了 734 纳米近红外线对细胞衰老的影响。将癌细胞(MCF7 和 A549)和非癌细胞(MCF10A 和 IMR-90)置于 63 mJ/cm2 的近红外光照射下 6 天。通过测量活性衰老相关的 beta-半乳糖苷酶来量化衰老水平。暴露于近红外光会明显增加癌细胞的衰老水平(10.0%-203.2%),但不会增加非癌细胞的衰老水平(p > 0.05)。衰老的变化与线粒体稳态的显著调节有关,包括近红外光处理后活性氧水平(p < 0.05)和线粒体膜电位(p < 0.05)的增加。这些结果表明,近红外光能调节细胞化学反应,通过诱导衰老阻止癌细胞增殖,同时保护非癌细胞。
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引用次数: 0
Optical coherence elastography with osmotically induced strains: Preliminary demonstration for express detection of cartilage degradation 利用渗透诱导应变进行光学相干弹性成像:快速检测软骨退化的初步验证
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-05-04 DOI: 10.1002/jbio.202400016
Yulia M. Alexandrovskaya, Ekaterina M. Kasianenko, Alexander A. Sovetsky, Alexander L. Matveyev, Dmitry A. Atyakshin, Olga I. Patsap, Mikhail A. Ignatiuk, Artem V. Volodkin, Vladimir Y. Zaitsev
Optical coherence elastography (OCE) demonstrated impressive abilities for diagnosing tissue types/states using differences in their biomechanics. Usually, OCE visualizes tissue deformation induced by some additional stimulus (e.g., contact compression or auxiliary elastic‐wave excitation). We propose a new variant of OCE with osmotically induced straining (OIS‐OCE) and demonstrate its application to assess various stages of proteoglycan content degradation in cartilage. The information‐bearing signatures in OIS‐OCE are the magnitude and rate of strains caused by the application of osmotically active solutions onto the sample surface. OCE examination of the induced strains does not require special tissue preparation, the osmotic stimulation is highly reproducible, and strains are observed in noncontact mode. Several minutes suffice to obtain a conclusion. These features are promising for intraoperative method usage when express assessment of tissue state is required during surgical operations. The “waterfall” images demonstrate the development of cumulative osmotic strains in control and degraded cartilage samples.
光学相干弹性成像(OCE)在利用生物力学差异诊断组织类型/状态方面的能力令人印象深刻。通常,光学相干弹性成像可观察到一些额外刺激(如接触压缩或辅助弹性波激励)引起的组织变形。我们提出了渗透诱导应变(OIS-OCE)的新变体,并展示了其在评估软骨中蛋白多糖含量降解的各个阶段的应用。OIS-OCE 的信息特征是在样品表面施加渗透活性溶液所引起的应变的大小和速率。OCE 对诱导应变的检测不需要特殊的组织准备,渗透刺激的可重复性很高,而且应变是在非接触模式下观察到的。几分钟即可得出结论。当手术操作过程中需要对组织状态进行快速评估时,这些特点很适合术中使用。瀑布 "图像展示了对照组和退化软骨样本中累积渗透应变的发展过程。
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引用次数: 0
Spatial targeted delivery of riboflavin with a controlled corneal iontophoresis delivery system in theranostic‐guided UV‐A light photo‐therapy 在治疗仪引导的紫外线-A 光光疗中使用可控角膜离子透入递送系统定向递送核黄素
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-05-02 DOI: 10.1002/jbio.202400068
Marco Lombardo, Sebastiano Serrao, Giuseppe Massimo Bernava, Giuseppe Lombardo
Seven human donor eye globes underwent corneal cross‐linking using theranostic UV‐A device with accessory corneal iontophoresis system for patterned delivery of a 0.22% riboflavin solution. Theranostic‐guided UV‐A light illumination assessed riboflavin distribution and treated corneas at 10 mW/cm2 for 9 min with a 5.0‐mm beam size. Corneal topography maps were taken at baseline and 2‐h post‐treatment. Analysis utilized corneal topography elevation data, with results showing controlled riboflavin delivery led to a consistent gradient, with 40% higher levels centrally (248 ± 79 μg/cm3) than peripherally (180 ± 72 μg/cm3 at ±2.5 mm from the center). Theranostic‐guided UV‐A light irradiation resulted in significant changes in corneal topography, with a decrease in best‐fit sphere value (−0.7 ± 0.2 D; p < 0.001) and consistent downward shift in corneal elevation map (−11.7 ± 3.7 μm). The coefficient of variation was 2.5%, indicating high procedure performance in achieving significant and reliable corneal flattening.
使用带有角膜离子透入系统附件的治疗仪紫外线-A 装置,以图案化方式输送 0.22% 核黄素溶液,对七只供体眼球进行了角膜交联。治疗仪引导的 UV-A 光照射评估了核黄素的分布情况,并以 10 mW/cm2 的功率和 5.0 mm 的光束尺寸对角膜进行了 9 分钟的处理。在基线和治疗后 2 小时拍摄角膜地形图。利用角膜地形图抬高数据进行分析,结果显示,控制核黄素的输送导致了一致的梯度,中心水平(248 ± 79 μg/cm3)比周边水平(180 ± 72 μg/cm3,距离中心 ± 2.5 mm)高出 40%。Theranostic 引导的 UV-A 光照射导致角膜地形图发生显著变化,最佳拟合球值下降(-0.7 ± 0.2 D; p < 0.001),角膜高程图持续下移(-11.7 ± 3.7 μm)。变异系数为 2.5%,表明手术在实现显著、可靠的角膜平整方面表现出色。
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引用次数: 0
Multiwavelength laser diode based portable photoacoustic and ultrasound imaging system for point of care applications 基于多波长激光二极管的便携式光声和超声成像系统,用于医疗点应用
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-05-02 DOI: 10.1002/jbio.202400058
Mahaan Mitra, Abigail Haworth, Prameth Gaddale, Faisal Badran, Nuzhath Lagno, Colette Pameijer, Faisal Aziz, Sri‐Rajasekhar Kothapalli
Vascular diseases are a leading cause of death and disability worldwide. Despite having precursor conditions like peripheral arterial disease (PAD), they are often only diagnosed after the onset of stroke or heart attack. Low‐cost, portable, noninvasive, point‐of‐care (POC), label‐free assessment of deep vascular function benefits PAD diagnosis, especially in resource poor settings of the world. Doppler ultrasound‐based blood flow measurements can diagnose PAD, albeit with limited sensitivity and specificity. To overcome this, here, we propose the first‐of‐its‐kind dual‐modality photoacoustic‐and‐ultrasound (PAUS) imaging system that integrates a multiwavelength pulsed laser diode (PLD) with a compact ultrasound data acquisition unit. The mesoscopic imaging depth of the portable PLD‐PAUS system was validated using tissue phantoms, and its multispectral photoacoustic imaging capabilities were validated using an atherosclerosis‐mimicking phantom. Furthermore, we demonstrated high‐contrast volumetric in vivo photoacoustic imaging of rodent abdominal vasculature and quantified vessel reactivity due to hypercapnia stimulation. The multiparametric functional and molecular imaging capabilities of the PLD‐PAUS system holds promise for POC applications.
血管疾病是导致全球死亡和残疾的主要原因。尽管有外周动脉疾病(PAD)等前驱疾病,但这些疾病往往在中风或心脏病发作后才被诊断出来。对深层血管功能进行低成本、便携式、无创、护理点(POC)、无标记的评估,有利于 PAD 诊断,尤其是在全球资源匮乏的环境中。基于多普勒超声的血流测量可诊断出急性心肌梗死,但灵敏度和特异性有限。为了克服这一问题,我们在此提出了首创的光声和超声(PAUS)双模态成像系统,该系统集成了多波长脉冲激光二极管(PLD)和紧凑型超声数据采集单元。使用组织模型验证了便携式 PLD-PAUS 系统的中观成像深度,并使用动脉粥样硬化模拟模型验证了其多光谱光声成像能力。此外,我们还展示了啮齿类动物腹部血管的高对比度体积光声成像,并量化了高碳酸血症刺激引起的血管反应性。PLD-PAUS 系统的多参数功能和分子成像能力为 POC 应用带来了希望。
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引用次数: 0
Teaching and learning in biophotonics: Crossing the bridge between educators and students. 生物光子学的教与学:架起教育者与学生之间的桥梁。
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-04-25 DOI: 10.1002/jbio.202300491
Marcelo S Nogueira, Jacqueline E Gunther, K. Komolibus, S. Ryan, Brian S Murray, Moises Jezzini, Declan Kennedy, S. Andersson-Engels
As a rapidly growing field, biophotonics demonstrates an increasingly higher demand for interdisciplinary professionals and requires the implementation of a structured approach to educational and outreach activities focused on appropriate curriculum, and teaching and learning for audiences with diverse technical backgrounds and learning styles. Our study shows the main findings upon applying this approach to biophotonics workshops delivered 2 consecutive years while updating and improving learning outcomes, teaching strategies, workshop content based on student and teacher feedback. We provided resources for a variety of lecture-based, experimental, computer simulation activities. Quality of subject matter, teaching, and overall learning was rated as "Very good" or "Good" by 88%, 76%, and 82% of students in average, respectively. Application of our teaching strategies and materials during short- and long-term workshops/courses could potentially increase the interest in pursuing careers in the biophotonics field and related areas, leading to standardized approaches in designing education and outreach events across centers.
作为一个快速发展的领域,生物光子学对跨学科专业人员的需求越来越高,这就要求在教育和外联活动中采用结构化方法,重点关注适当的课程以及针对具有不同技术背景和学习风格的受众的教学和学习。我们的研究显示了将这种方法应用于连续两年举办的生物光子学讲习班的主要结果,同时根据学生和教师的反馈意见更新和改进了学习成果、教学策略和讲习班内容。我们为各种讲座、实验和计算机模拟活动提供了资源。平均分别有 88%、76% 和 82% 的学生将主题、教学和整体学习质量评为 "非常好 "或 "好"。在短期和长期讲习班/课程中应用我们的教学策略和材料,有可能提高学生对生物光子学领域和相关领域职业的兴趣,从而在各中心设计教育和外联活动时采用标准化方法。
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引用次数: 0
Design and analysis of a fiber Bragg grating-based foot pressure assessment system. 基于光纤布拉格光栅的脚压评估系统的设计与分析。
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-04-25 DOI: 10.1002/jbio.202400070
P. Sharan, G. Khouqeer, B. A. El-Badry, Anup M. Upadhyaya
This research presents a comprehensive study focused on the design, implementation, and analysis of an innovative fiber Bragg grating (FBG) based foot pressure assessment system. FBG sensors strategically placed on the great toe, metatarsal 1, metatarsal 2, and heel provided distinct peak resonant wavelengths, strains, and pressures during experimental cycles. Participant 1 exhibited peak resonant wavelength of 1537.745 nm for great toe, 1537.792 nm for metatarsal 1, 1537.812 nm for metatarsal 2, and 1537.824 nm for heel. Participant 2 showcased distinct graphical representations with peak resonant wavelengths ranging from 1537.903 to 1537.917 nm. In a fracture patient condition, the FBG-based system monitored weight-bearing capacity, integrated with real-time X-ray imaging for dynamic insights of rehabilitation as distinct approach. The strains and pressures at each position exhibited notable variations along with the sensitivity of 1.31με obtained across all positions, underscoring the FBG-based system's reliability in capturing subtle foot pressure.
本研究介绍了一项综合研究,重点关注基于光纤布拉格光栅(FBG)的创新型足压评估系统的设计、实施和分析。FBG 传感器被战略性地放置在大脚趾、跖骨 1、跖骨 2 和脚跟处,在实验周期中提供了不同的峰值共振波长、应变和压力。参与者 1 的大脚趾共振峰值波长为 1537.745 纳米,跖骨 1 为 1537.792 纳米,跖骨 2 为 1537.812 纳米,脚跟为 1537.824 纳米。参与者 2 显示了不同的图形,共振峰值波长从 1537.903 纳米到 1537.917 纳米不等。在骨折患者的情况下,基于 FBG 的系统监控负重能力,并与实时 X 射线成像相结合,以动态方式了解康复情况。每个位置的应变和压力都表现出明显的变化,所有位置的灵敏度都达到了 1.31με,这说明基于 FBG 的系统在捕捉微妙的足部压力方面非常可靠。
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引用次数: 0
Lateralization of cortical activity, networks, and hemodynamic lag after stroke: A resting-state fNIRS study. 中风后皮层活动、网络和血液动力学滞后的侧化:静息态 fNIRS 研究。
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-04-24 DOI: 10.1002/jbio.202400012
Gongcheng Xu, Tiandi Chen, Jiahui Yin, Guangjian Shao, Yubo Fan, Zengyong Li
Focal damage due to stroke causes widespread abnormal changes in brain function and hemispheric asymmetry. In this study, functional near-infrared spectroscopy (fNIRS) was used to collect resting-state hemoglobin data from 85 patients with subacute stroke and 26 healthy controls, to comparatively analyze the characteristics of lateralization after stroke in terms of cortical activity, functional networks, and hemodynamic lags. Higher intensity of motor cortical activity, lower hemispheric autonomy, and more abnormal hemodynamic leads or lags were found in the affected hemisphere. Lateralization metrics of the three aspects were all associated with the Fugl-Meyer score. The results of this study prove that three lateralization metrics may provide clinical reference for stroke rehabilitation. Meanwhile, the present study piloted the use of resting-state fNIRS for analyzing hemodynamic lag, demonstrating the potential of fNIRS to assess hemodynamic abnormalities in addition to the study of cortical neurological function after stroke.
脑卒中导致的局灶性损伤会引起广泛的脑功能异常变化和半球不对称。本研究利用功能近红外光谱(fNIRS)采集了85例亚急性脑卒中患者和26例健康对照者的静息态血红蛋白数据,从皮质活动、功能网络和血流动力学滞后等方面比较分析了脑卒中后侧化的特点。结果发现,受影响半球的运动皮层活动强度更高、半球自主性更低、异常血液动力学线索或滞后更多。这三个方面的侧化指标均与 Fugl-Meyer 评分相关。研究结果证明,三个侧化指标可为脑卒中康复提供临床参考。同时,本研究尝试使用静息态 fNIRS 分析血流动力学滞后,证明了 fNIRS 在研究脑卒中后皮层神经功能的同时评估血流动力学异常的潜力。
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引用次数: 0
Characterization of human skin under tension using terahertz time domain spectroscopy 利用太赫兹时域光谱分析张力作用下人体皮肤的特征。
IF 2.8 3区 物理与天体物理 Q1 Engineering Pub Date : 2024-04-23 DOI: 10.1002/jbio.202400003
Baitong Chen, Pengyan Zhang, Keyu Tan, Hengxin Zhu, Zixuan Li, Chuanwei Li, Zhiyong Wang

This paper introduces a spectral analysis method for monitoring the human skin in vivo based on a combination of terahertz time-domain spectroscopy (THz-TDS) and optical coherence tomography (OCT). The method can quantitatively measure the refractive index, thickness and transmission coefficient of epidermis, and the refractive index of dermis in natural, as well as the tension condition of the skin. An optically reflective model for the multilayer structure of the skin is first established. The initial thickness of the epidermis is then measured by OCT as a known quantity for the established model. By fitting the established model to the experimentally obtained THz-TDS signals, the above parameters of the skin can be calibrated. Furthermore, the dependence of these skin parameters on the tension status are investigated. This study provides a means for terahertz technology to measure the skin in vivo.

本文介绍了一种基于太赫兹时域光谱(THz-TDS)和光学相干断层扫描(OCT)相结合的活体皮肤监测光谱分析方法。该方法可定量测量表皮的折射率、厚度和透射系数,以及真皮的折射率和皮肤的张力状况。首先建立了皮肤多层结构的光学反射模型。然后用 OCT 测量表皮的初始厚度,作为已建立模型的已知量。通过将建立的模型与实验获得的 THz-TDS 信号进行拟合,可以校准皮肤的上述参数。此外,还研究了这些皮肤参数与张力状态的关系。这项研究为太赫兹技术测量体内皮肤提供了一种方法。
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引用次数: 0
期刊
Journal of Biophotonics
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