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Misassignment of Fourier-Transform Infrared Spectra for Monitoring the Crosslinking of Collagen: A Critical Analysis 用于监测胶原交联的傅里叶变换红外光谱的错配:一个关键分析
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-01-14 DOI: 10.1002/jbio.70216
Traian V. Chirila, Shuko Suzuki, Idriss Blakey

Fourier-transform infrared spectroscopy (FTIR) is acknowledged as a highly effective analytical tool, and is extensively used in chemistry, biochemistry, and biomedical research. In our attempt to establish a method for monitoring the level of photochemical crosslinking of collagen, aiming at therapeutic applications, we have found that there is actually no straightforward FTIR method able to provide unambiguous outcomes needed to evaluate the crosslinking process, either photochemical or chemical. Based on the analysis of the existing literature, the reasons for this situation were appraised, and deficiencies and uncertainties of the results so far reported were discussed in detail. We concluded that, at this stage, the FTIR-based methods will not become reliable until progress in enhancing knowledge of the chemistry of photochemical and chemical crosslinking of collagen would allow more accurate FTIR band assignments.

傅里叶变换红外光谱(FTIR)是公认的一种高效的分析工具,广泛应用于化学、生物化学和生物医学研究。在我们试图建立一种监测胶原蛋白光化学交联水平的方法,旨在治疗应用中,我们发现实际上没有直接的FTIR方法能够提供评估光化学或化学交联过程所需的明确结果。在分析已有文献的基础上,对造成这种情况的原因进行了评价,并对目前报道的结果的不足和不确定性进行了详细的讨论。我们的结论是,在现阶段,基于FTIR的方法将不会变得可靠,直到增强光化学化学知识和胶原蛋白的化学交联将允许更准确的FTIR波段分配。
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引用次数: 0
High-Sensitivity SPR Biosensor for Tumor Cell Exosome Detection Based on Ge-Doped Fiber Core PCF 基于掺锗光纤芯PCF的肿瘤细胞外泌体检测高灵敏度SPR生物传感器
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-01-14 DOI: 10.1002/jbio.70222
Licui Ji, Honggang Pan, Hongli Dai, Qingcheng You, Yukun Zhu, Xing Wang, Xu Gao

Current exosome detection technologies are constrained by limited sensitivity and refractive index (RI) detection ranges. To address this, this study proposes a biosensor based on germanium-doped photonic crystal fiber (PCF) and surface plasmon resonance (SPR) technology. Featuring a D-shaped structure with three layers of periodic pores, a germanium-doped core, and a gold film coating, this sensor extends the effective RI detection range to 1.00–1.45 RIU and achieves a peak wavelength sensitivity of 30 000 nm/RIU at 1500 nm. Simulation and optimization results demonstrate that this sensor can distinguish normal exosomes (1.35–1.38 RIU), tumor-derived exosomes (1.39–1.42 RIU), and pro-metastatic exosomes (1.43–1.45 RIU). Sensitivity significantly increases in the high-RI range (> 1.42 RIU), with corresponding maximum detection accuracies of 5 × 10−5, 1.6 × 10−5, and 3.33 × 10−6 RIU, respectively. This sensor provides a label-free, high-performance detection tool for early postoperative micrometastasis surveillance, thereby enhancing cancer management efficacy.

目前的外泌体检测技术受限于有限的灵敏度和折射率(RI)检测范围。为了解决这个问题,本研究提出了一种基于掺锗光子晶体光纤(PCF)和表面等离子体共振(SPR)技术的生物传感器。该传感器具有三层周期孔的d形结构,掺锗芯和金膜涂层,将有效的RI检测范围扩展到1.00-1.45 RIU,在1500 nm处实现了30,000 nm/RIU的峰值波长灵敏度。仿真和优化结果表明,该传感器可以区分正常外泌体(1.35-1.38 RIU)、肿瘤源性外泌体(1.39-1.42 RIU)和促转移外泌体(1.43-1.45 RIU)。在高ri范围内(> 1.42 RIU),灵敏度显著提高,相应的最大检测精度分别为5 × 10−5、1.6 × 10−5和3.33 × 10−6 RIU。该传感器为术后早期微转移监测提供了一种无标签、高性能的检测工具,从而提高了肿瘤的治疗效果。
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引用次数: 0
Effects of Cold Atmospheric Plasma on Shear Bond Strength of Glass Ionomer Cement and Composite for Orthodontic Brackets: An In Vitro Pilot Study 低温大气等离子体对正畸托槽玻璃离聚体水泥及复合材料剪切结合强度的影响
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-11-04 DOI: 10.1002/jbio.202500298
Sarah Viktoria Zenker, Henrik Dommisch, Franziska Schmidt, Max Heiland, Susanne Nahles, Kathrin Becker, Saskia Preissner, Moritz Hertel

This pilot study investigates the effects of cold atmospheric plasma (CAP) on enamel, focusing on wettability and shear bond strength (SBS) in orthodontic bracket bonding. Thirty-two human incisors are assigned to four groups: two negative controls bonded with Transbond XT (XT) and Ketac Cem (KC), and two experimental groups with plasma pre-treatment (XT-CAP and KC-CAP). Contact angle measurements and shear tests are conducted to assess the influence of CAP on surface properties. Compared to untreated controls, CAP application significantly increases both wettability and SBS (p < 0.001, Wilcoxen signed-rank test and Mann–Whitney U test). Plasma treatment results in higher bracket survival rates, attributed to improved adhesion. Notably, CAP enhances the performance of Ketac Cem, suggesting its viability as an alternative to composite adhesives. These findings highlight the potential of CAP to improve bonding reliability for fixed orthodontic appliances.

本试验研究了低温大气等离子体(CAP)对牙釉质的影响,重点研究了正畸支架黏合时的润湿性和剪切黏合强度(SBS)。将32个人切牙分为4组:阴性对照与trans - bond XT (XT)和Ketac Cem (KC)结合,实验组与血浆预处理组(XT- cap和KC- cap)结合。通过接触角测量和剪切试验来评估CAP对表面性能的影响。与未经处理的对照相比,CAP应用显著增加了润湿性和SBS (p
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引用次数: 0
Examining the Impact of Color Contrast Using Digital Anthropometric Estimates of Body Composition 使用身体成分的数字人体测量估计来检查颜色对比度的影响。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-11-02 DOI: 10.1002/jbio.202500253
Michael V. Fedewa, Casey J. Metoyer, JoonHo Lee, Katherine Sullivan, Lee J. Winchester, Mark T. Richardson, Michael R. Esco

Purpose

This study examined the reliability of adiposity (%Fat) measured from a single digital image using a smartphone-based application with different color backgrounds.

Methods

A reference image was obtained while participants (n = 32) stood in front of a white background (WB), with additional images obtained in front of black, green, orange, and gray backgrounds. A contrast ratio was calculated between the background and clothing RGB hexadecimal color values. Linear mixed-effects modeling determined if color contrasts explained the background effect on %Fat estimation.

Results

The Green, Orange, and Gray conditions yielded constant error (CE) roughly 1.0 %Fat, with greater CE observed in the Black background. Neither the within person–contrast (p = 0.638) nor the between-person contrast (p = 0.451) was associated with the CE and did not explain any extra variability in the CE (χ2 = 0.83, p = 0.660).

Conclusion

Images with darker background colors may result in greater CE due to lower contrast between the background and clothing.

目的:本研究通过使用不同颜色背景的基于智能手机的应用程序,检验了从单个数字图像中测量的肥胖(%Fat)的可靠性。方法:在32名被试者站在白色背景(WB)前获取参考图像,在黑色、绿色、橙色和灰色背景前获取附加图像。计算了背景和服装RGB十六进制颜色值之间的对比度。线性混合效应模型确定颜色对比是否解释了%Fat估计中的背景效应。结果:绿色、橙色和灰色条件下产生的恒定误差(CE)大约为1.0%,黑色背景下观察到的CE更大。人内对比(p = 0.638)和人间对比(p = 0.451)均与CE无关,也不能解释CE的任何额外变异性(χ2 = 0.83, p = 0.660)。结论:背景颜色较深的图像可能会导致较大的CE,因为背景和服装之间的对比度较低。
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引用次数: 0
Systemic Effects of Vascular Photobiomodulation on Early Macrophage Recruitment During Skeletal Muscle Repair 血管光生物调节对骨骼肌修复过程中早期巨噬细胞募集的全身影响。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-29 DOI: 10.1002/jbio.202500368
Raquel Lira Ortiz da Silva, Tainá Caroline dos Santos Malavazzi, Aline Souza Silva, Sandra Kalil Bussadori, Anna Carolina Ratto Tempestini Horliana, Fabio Daumas Nunes, Kristianne Porta Santos Fernandes, Maria Fernanda Setubal Destro Rodrigues, Raquel Agnelli Mesquita-Ferrari

Muscle injuries involve a complex inflammatory response in which macrophages are essential for proper tissue repair. Dysregulation of this process can impair regeneration. This study investigated the effects of vascular photobiomodulation (VPBM), a non-invasive therapy applied via the caudal vein/artery, on macrophage dynamics in acute skeletal muscle injury. Wistar rats were divided into Control, Injury, Pre-VPBM+Injury, and Injury+Post-VPBM groups. VPBM (780 nm, 40 mW, 3.2 J) was applied preventively or therapeutically. Animals were euthanized on days 1, 2, 5, and 7 post-injury for CD68+ and CD206+ immunostaining. CD68+ cells peaked on day 1 in the Pre-VPBM+Injury group, while the Injury group maintained higher levels at day 7. CD206+ cells were elevated early in both VPBM groups, especially Pre-VPBM. On day 7, CD206+ remained higher in the Injury group, indicating delayed resolution. In summary, the study demonstrates that preventive VPBM application accelerates macrophage recruitment and promotes a pro-regenerative inflammatory response.

肌肉损伤涉及复杂的炎症反应,其中巨噬细胞对适当的组织修复至关重要。这一过程的失调会损害再生。本研究探讨了血管光生物调节(VPBM)对急性骨骼肌损伤中巨噬细胞动力学的影响,VPBM是一种通过尾静脉/动脉进行的非侵入性治疗。Wistar大鼠分为对照组、损伤组、vpbm前+损伤组和损伤+后vpbm组。VPBM (780 nm, 40 mW, 3.2 J)用于预防或治疗。分别于伤后第1、2、5、7天实施安乐死,进行CD68+和CD206+免疫染色。Pre-VPBM+损伤组CD68+细胞在第1天达到峰值,而损伤组在第7天保持较高水平。在两个VPBM组中,CD206+细胞早期升高,尤其是Pre-VPBM。第7天,损伤组CD206+水平仍然较高,表明消退延迟。总之,该研究表明,预防性应用VPBM可加速巨噬细胞募集,促进促再生炎症反应。
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引用次数: 0
Depth-Resolved Poroscopy: A Swept-Source Optical Coherence Tomography Approach to Automated Fingerprint Microfeature Analysis 深度分辨孔镜:一种扫描源光学相干层析成像方法用于自动指纹微特征分析。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-29 DOI: 10.1002/jbio.202500392
Avinash Kumar, Raju Poddar

We demonstrate a depth-resolved Swept-Source Optical Coherence Tomography (SS-OCT) system for automated poroscopy network identification in fingerprint biometrics. The system employs a 100 kHz swept-source laser (λ0 = 1060 nm, Δλ = 110 nm) to achieve ~4.5 μm axial and 13 μm lateral resolution at 1.8 mW incident power. High-density scanning (1500 A-scans/B-scan × 500 B-scans over a 3 × 3 mm region) captures volumetric en face images that precisely localize Level 3 sweat-pore microfeatures. In a study of 40 healthy volunteers (20 M, 20 F), an automated ImageJ pipeline extracted pore morphology with sub-pixel accuracy. Two-way ANOVA attributed 60.10% of total variance to pore shape (p < 0.0001) and 14.62% to gender (p < 0.0001). The average pore count was significantly higher in males (20.53 ± 2.14) compared to females (14.00 ± 1.76, p < 0.0001). These results validate SS-OCT–based poroscopy as a robust, depth-resolved alternative for forensic and biometric identification.

我们展示了一种深度分辨扫描源光学相干断层扫描(SS-OCT)系统,用于指纹生物识别中的自动孔镜网络识别。该系统采用100 kHz扫描源激光器(λ0 = 1060 nm, Δλ = 110 nm),在1.8 mW入射功率下实现了~4.5 μm轴向和13 μm横向分辨率。高密度扫描(在3 × 3 mm区域内进行1500次a扫描/ b扫描× 500次b扫描)捕获体积面部图像,精确定位3级汗孔微特征。在一项对40名健康志愿者(20米,20英尺)的研究中,ImageJ自动化管道以亚像素精度提取孔隙形态。双向方差分析将60.10%的总方差归因于孔隙形状(p
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引用次数: 0
Alterations of Raman Profiles of Cystic Echinococcosis Serum After Treated With ABZ by SERS ABZ对囊性包虫病血清拉曼谱的影响。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-29 DOI: 10.1002/jbio.202500373
Ziyi Fang, Shengke Xu, Shaoquan Xu, Run Zhou, Maierhaba Maimaitiaili, Wubulitalifu Dawuti, Xiaojuan Bi, Renyong Lin, Guodong Lü

Cystic echinococcosis (CE) is often treated with albendazole (ABZ). Surface-enhanced Raman scattering (SERS) has high sensitivity and specificity, as well as low sample consumption, but its ability to identify changes in serum compounds post-ABZ treatment is unclear. This study used SERS to characterize the Raman profiles of serum from 7 normal, 9 CE-model, and 10 ABZ-treated mice, analyzing profile differences. Tentative peak assignments revealed ABZ-induced biomolecular changes in protein structure (1000 cm−1), uric acid (1130 cm−1), amide III (1203 cm−1), phospholipids, and amide I (1656 cm−1). The top 10 principal components (PCs) accounted for 90% of the variance (PC1: 48.9%). Principal components analysis (PCA) loadings suggested these substances as markers of ABZ treatment. The results show that SERS combined with PCA is a rapid and effective method to observe serum changes in Echinococcus granulosus-infected subjects.

囊性包虫病(CE)通常用阿苯达唑(ABZ)治疗。表面增强拉曼散射(SERS)具有高灵敏度和特异性,以及低样品消耗,但其识别abz治疗后血清化合物变化的能力尚不清楚。本研究采用SERS对7只正常小鼠、9只ce模型小鼠和10只abz处理小鼠血清拉曼谱进行表征,分析其差异。初步峰分配显示abz诱导的蛋白结构(1000 cm-1)、尿酸(1130 cm-1)、酰胺III (1203 cm-1)、磷脂和酰胺I (1656 cm-1)的生物分子变化。前10个主成分(PCs)占方差的90% (PC1: 48.9%)。主成分分析(PCA)表明这些物质是ABZ处理的标志。结果表明,SERS联合PCA是一种快速有效的观察细粒棘球绦虫感染受试者血清变化的方法。
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引用次数: 0
Assessing Effects of Riboflavin/UV-A Cross-Linking on Aqueous Outflow Facility, Corneal Biomechanics and Their Association With Intraocular Pressure 评估核黄素/UV-A交联对水流出设施、角膜生物力学及其与眼压的关系的影响。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-29 DOI: 10.1002/jbio.202500432
Yilong Zhang, Zhengshuyi Feng, Xingyu Jiang, Robert Scott, Ying Yang, Chunhui Li, Zhihong Huang

Riboflavin/UV-A corneal collagen cross-linking (CXL) is a standard treatment for early-stage keratoconus. However, quantitative CXL outcomes remain limited. This study evaluated CXL effects on outflow facility and corneal biomechanics at intraocular pressures (IOPs) in ex vivo porcine eyes. Ocular rigidity and outflow facility were derived from pressure–volume and IOP decay curves using a direct manometric technique, while corneal elasticity (Young's modulus) was measured via non-contact air-pulse optical coherence elastography. CXL increased ocular rigidity (0.0066 ± 0.0001 μL−1 vs. 0.0060 ± 0.0002 μL−1) and reduced outflow facility from 0.5429 ± 0.0320 to 0.1485 ± 0.0153 μL/min/mmHg (20–40 mmHg), compared to 0.7327 ± 0.0894–0.2210 ± 0.0502 μL/min/mmHg in untreated eyes. Young's modulus increased by 92%, 89%, and 155% at 20, 30, and 40 mmHg. These findings enhance our understanding of flow dynamics at IOP levels, suggesting that outflow facility and corneal biomechanics may serve as potential indicators for evaluating the effectiveness of CXL.

核黄素/UV-A角膜胶原交联(CXL)是早期圆锥角膜的标准治疗方法。然而,定量的CXL结果仍然有限。本研究评估了CXL对离体猪眼眼压(iop)下流出设施和角膜生物力学的影响。使用直接测压技术从压力-体积和IOP衰减曲线中获得眼刚度和流出设施,而通过非接触式空气脉冲光学相干弹性成像测量角膜弹性(杨氏模量)。CXL增加了眼硬性(0.0066±0.0001 μL-1 vs. 0.0060±0.0002 μL-1),将流出流量从0.5429±0.0320 μL/min/mmHg (20-40 mmHg)降低到0.1485±0.0153 μL/min/mmHg,而未治疗的眼睛为0.7327±0.0894-0.2210±0.0502 μL/min/mmHg。在20,30和40mmhg下,杨氏模量分别增加了92%,89%和155%。这些发现增强了我们对IOP水平下血流动力学的理解,表明流出设施和角膜生物力学可以作为评估CXL有效性的潜在指标。
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引用次数: 0
Direct Detection of Viruses Using Antibody-Modified Gold Nanorods 利用抗体修饰金纳米棒直接检测病毒。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-28 DOI: 10.1002/jbio.202500417
Axell Rodriguez, Yana Purvinsh, Aidan P. Holman, Dmitry Kurouski

Seasonal and sporadic viral infections put enormous burdens on global health and society. Although polymerase chain reaction (PCR) and other molecular approaches can be used to detect and identify viruses, they require substantial sample processing time and often have limited portability, limiting their utility in point-of-care settings. In the current study, we investigate the accuracy of direct sensing of two bacteriophages using chemically modified gold nanorods (AuNRs). We demonstrate that when using functionalized polyethylene glycol (PEG), the surface of AuNRs can be modified with desired antibodies against a particular pathogen. Furthermore, PEG protects and passivates the surface of AuNRs against unspecific binding of biomolecules that can be present in the body fluids. We also showed that dynamic light scattering (DLS) was capable of detecting virus-bound AuNRs, enabling confirmatory detection of viruses. These results indicate that antibody-modified AuNRs can be used for the confirmatory detection of various viruses.

季节性和散发性病毒感染给全球卫生和社会带来巨大负担。虽然聚合酶链反应(PCR)和其他分子方法可用于检测和鉴定病毒,但它们需要大量的样品处理时间,而且通常携带性有限,限制了它们在护理点环境中的效用。在目前的研究中,我们研究了使用化学修饰的金纳米棒(aunr)直接传感两种噬菌体的准确性。我们证明,当使用功能化聚乙二醇(PEG)时,可以用针对特定病原体的所需抗体修饰aunr的表面。此外,PEG保护和钝化aunr的表面,使其免受体液中可能存在的生物分子的非特异性结合。我们还发现动态光散射(DLS)能够检测病毒结合的aunr,从而能够确定病毒的检测。这些结果表明,抗体修饰的aunr可用于多种病毒的验证性检测。
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引用次数: 0
Robust and Generalizable Detection of Scleral Spots and Dots in Complex Ocular Surfaces With Attention and Mamba-Enhanced YOLOv5 基于注意力和曼巴增强YOLOv5的复杂眼表面巩膜斑点和点的鲁棒和可推广检测
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-10-28 DOI: 10.1002/jbio.202500406
Hantao Bai, Zongqing Ma, Chuxiang Gao, Fan Fan, Xiaochen Meng, Xiaoqing Zhang, Jiang Zhu

Scleral plaque spots and pigmentation dots have significant potential for non-invasive disease diagnosis. However, the high intra-class variability in their size, shape, and distribution across individuals poses a critical challenge for automated and robust detection in complex scleral images. This study presents an integrated system that combines sclera imaging and object detection to overcome these challenges. First, a specially designed sclera imaging device is employed to obtain the high quality and shadowless scleral images. Then, an improved YOLOv5 model is proposed, incorporating three key enhancements: a CBAM module to suppress redundant information, a series of Mamba blocks to expand the model's receptive field in scleral images, and a small head strategy to enhance the detection effectiveness on small objects. The proposed detection algorithm was validated on three disparate scleral datasets. The experimental results demonstrate that the proposed method can effectively detect scleral spots and dots, featuring robust and generalizable performance.

巩膜斑块斑和色素沉着点在非侵入性疾病诊断中具有重要的潜力。然而,它们的大小、形状和分布在个体之间的高度类内变异性对复杂巩膜图像的自动化和鲁棒检测提出了关键挑战。本研究提出了一种结合巩膜成像和目标检测的集成系统来克服这些挑战。首先,采用专门设计的巩膜成像装置,获得高质量无影巩膜图像。然后,提出了一种改进的YOLOv5模型,其中包括三个关键增强:CBAM模块抑制冗余信息,一系列Mamba块扩展模型在巩膜图像中的感受野,以及小头部策略增强对小物体的检测效果。在三个不同的巩膜数据集上验证了所提出的检测算法。实验结果表明,该方法能够有效地检测出巩膜斑点和点,具有鲁棒性和泛化性。
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引用次数: 0
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Journal of Biophotonics
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