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Characterizing Biomechanics of Limbal Niche Using Vibrational Optical Coherence Elastography 利用振动光学相干弹性成像技术确定瓣膜壁龛的生物力学特征
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-27 DOI: 10.1002/jbio.202400172
Ryan Dimmock, Yilong Zhang, Gibran F. Butt, Saaeha Rauz, Zhihong Huang, Ying Yang

The limbal niche is an adult source of epithelial stem cells which regenerate the cornea epithelium. The architecture and biomechanical properties of the limbus have previously been demonstrated to change due to aging and disease. This study aims to non-destructively and simultaneously quantify these limbal niche properties, along with their age-related changes. A lab-built vibrational optical coherence elastography (OCE) device consisting of a phase-sensitive optical coherence tomography (OCT) with a vibrational stimulator has been used to collect structural images and the depth-resolved elasticity of human corneoscleral tissues (aged 4–96 years old). The limbal palisades of Vogt (POV) were delineated well in OCT images which were validated by histology. The POVs have been spatially mapped with simultaneous elasticity measurements in cross-sections, showing tissue stiffness distributions across the undulations. A significant influence of age on the dimensions of the POVs was explored. The elastic modulus within the limbal niches for the ≥65-year-old group was significantly higher than that of the <65-year-old group.

角膜缘龛是上皮干细胞的成人来源,可再生角膜上皮。以前的研究表明,角膜缘的结构和生物力学特性会因衰老和疾病而发生变化。本研究旨在非破坏性地同时量化这些角膜缘龛特性及其与年龄相关的变化。实验室自制的振动光学相干弹性成像(OCE)设备由相位敏感光学相干断层扫描(OCT)和振动刺激器组成,用于收集人类角巩膜组织(4-96 岁)的结构图像和深度分辨弹性。OCT 图像很好地勾勒出了 Vogt 角巩膜瓣(POV)的轮廓,并通过组织学进行了验证。通过横截面的弹性同步测量,对 POV 进行了空间映射,显示了起伏处的组织硬度分布。研究发现,年龄对 POVs 的尺寸有重大影响。年龄≥65 岁组的睑缘龛内弹性模量明显高于年龄≥65 岁组的睑缘龛内弹性模量。
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引用次数: 0
Blood Plasma Film Multifractal Scanning in COVID-19 Consequences Diagnostics COVID-19 后果诊断中的血浆膜多分形扫描。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-26 DOI: 10.1002/jbio.202400356
Alexander Ushenko, Natalia Pavlyukovich, Oksana Khukhlina, Olexander Pavlyukovich, Iryna Soltys, Alexander Dubolazov, Yurii Ushenko, Ivan Gordey, Jun Zheng, Zhebo Chen, Lin Bin

A 3D phase scanning method was applied to study blood plasma facies, generating layered polarization maps of the object field. The most sensitive parameters to changes in birefringence distribution were identified. Multifractal analysis using wavelet transforms and fractal dimension spectra provided specific insights into the scale self-similarity of the polarization maps. The multifractal spectra of ellipticity distributions were algorithmically derived, revealing that the third- and fourth-order statistical moments were most sensitive to changes in the supramolecular networks of the facies. These findings were successfully applied to differentiate post-COVID-19 effects with high accuracy.

应用三维相位扫描方法研究血浆面,生成对象场的分层偏振图。确定了对双折射分布变化最敏感的参数。利用小波变换和分形维度光谱进行的多分形分析为了解偏振图的尺度自相似性提供了具体线索。通过算法得出了椭圆度分布的多分形光谱,发现三阶和四阶统计矩对面层超分子网络的变化最为敏感。这些发现被成功地应用于高精度区分后 COVID-19 效应。
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引用次数: 0
Quantitative Characterization of Zebrafish Caudal Fin Regeneration Based on Mueller Matrix OCT In Vivo 基于 Mueller Matrix OCT 的斑马鱼尾鳍再生活体定量特征描述
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-25 DOI: 10.1002/jbio.202400376
Zaifan Wang, Ke Li, Hui Chen, Zhifang Li, Wangbiao Li, Hui Lin, Liqin Zheng, Xiaoman Zhang, Shulian Wu

Zebrafish serves as a valuable model for studying tissue regeneration due to their comprehensive regenerative abilities, particularly in bone tissue. In this study, a Mueller matrix optical coherence tomography (OCT) system was applied to monitor the regenerative processes of zebrafish caudal fins in vivo. The analysis focused on evaluating the thickness of the caudal fin tip and the distribution of internal bone tissue during the regenerative process. Subsequently, the effect of ectoine solution on the regeneration process was observed and discussed. Our findings revealed that the caudal fin blastema did not exhibit phase-induced polarization characteristics in the Mueller matrix OCT images. Statistical analyses indicated that the caudal fins did not fully regenerate to their original state within 21 days. Furthermore, the results suggested that ectoine solution could enhance tissue regeneration. This approach provides a method for quantifying zebrafish caudal fin regeneration and advances observation techniques for biomedical and clinical applications.

斑马鱼具有全面的再生能力,尤其是骨组织再生能力,因此是研究组织再生的重要模型。本研究应用穆勒矩阵光学相干断层扫描(OCT)系统监测斑马鱼尾鳍的体内再生过程。分析的重点是评估再生过程中尾鳍尖端的厚度和内部骨组织的分布。随后,还观察并讨论了伊可丁溶液对再生过程的影响。我们的研究结果表明,尾鳍囊肿在穆勒矩阵 OCT 图像中没有表现出相位诱导偏振特征。统计分析表明,尾鳍在 21 天内并未完全再生至原始状态。此外,研究结果表明,埃克托因溶液可促进组织再生。这种方法提供了一种量化斑马鱼尾鳍再生的方法,推动了生物医学和临床应用观察技术的发展。
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引用次数: 0
Optical Transparency Windows in Near-Infrared and Short-Wave Infrared for the Skin, Skull, and Brain: Fluorescence Bioimaging Using PbS Quantum Dots 用于皮肤、头骨和大脑的近红外和短波红外光学透明窗口:使用 PbS 量子点的荧光生物成像。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-24 DOI: 10.1002/jbio.202400171
Jinghan Qu, Iuliia Golovynska, Jiantao Liu, Junle Qu, Sergii Golovynskyi

Fluorescence imaging (FI) employing near-infrared (NIR) light within the range of ~750–1350 nm enables biomedical imaging several millimeters beneath the tissue surface. More recent investigations into the short-wave IR (SWIR) transparency windows between ~1550–1870 and 2100–2300 nm highlight their superior capabilities. This research presents a comparison of IR-FI of PbS quantum dots, emitting at 990, 1310, and 1580 nm, through the mouse scalp skin, skull, and brain. The SWIR fluorescence is the most effectively transmitted signal, showing particularly significant enhancement when passing through the skull, which causes high light scattering. For the analysis of the imaging results and light propagation through the organs, their spectra of attenuation, absorption, and scattering coefficients are measured. In view of biomedical imaging, attenuation due to light scattering is a more destructive factor. Hence, the spatial resolution and imaging contrast can be improved by operating in SWIR due to decreased light scattering.

利用波长在 750-1350 纳米范围内的近红外(NIR)光进行荧光成像(FI),可在组织表面下几毫米处进行生物医学成像。最近对 ~1550-1870 纳米和 2100-2300 纳米之间的短波红外(SWIR)透明窗口进行的研究凸显了其卓越的功能。本研究比较了发射波长为 990、1310 和 1580 纳米的 PbS 量子点透过小鼠头皮、头骨和大脑的红外荧光成像。西南红外荧光是最有效的透射信号,在穿过造成高光散射的颅骨时,表现出特别明显的增强。为了分析成像结果和光在器官中的传播情况,测量了器官的衰减、吸收和散射系数光谱。在生物医学成像中,光散射造成的衰减是一个更具破坏性的因素。因此,由于光散射的减少,在 SWIR 工作可提高空间分辨率和成像对比度。
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引用次数: 0
Noninvasive Detection of the Skin Structure and Inversed Retrieval of Chromophore Information Based on Diffuse Reflectance Spectroscopy 基于漫反射光谱的皮肤结构无创检测和色素信息反向检索。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-24 DOI: 10.1002/jbio.202400118
Jinyao Wang, Dong Li, Bin Chen

The detection of skin's structure lays the foundation for personalized laser surgery of vascular skin disease, which can be noninvasively achieved by diffuse reflectance spectroscopy (DRS). A two-step inverse Monte Carlo radiation method based on DRS under two source-detector separations was proposed to quantify the skin structure, including chromophore concentration (melanin f m and hemoglobin f b), epidermal thickness t epi, average vessel diameter D ves, depth d pws and thickness t pws of the vascular layer for diseased skin. The method fitted the simulated DRS to the measured DRS iteratively, differences between which were described by a specific objective function to amplify blood absorption at 500–600 nm, and D ves, d pws, and t pws were estimated based on f m, f b, and t pws fitted in the first step. The results showed that the two-step method dramatically improve the inversion accuracy with mean errors of f m, f b, t pws, and d pws less than 5%.

皮肤结构的检测为血管性皮肤病的个性化激光手术奠定了基础,而皮肤结构的检测可通过漫反射光谱(DRS)无创实现。研究人员提出了一种基于两个光源-探测器分离条件下 DRS 的两步逆蒙特卡罗辐射方法,用于量化皮肤结构,包括病变皮肤的发色团浓度(黑色素 fm 和血红蛋白 fb)、表皮厚度 tepi、血管平均直径 Dves、深度 dpws 和血管层厚度 tpws。该方法将模拟 DRS 与测量的 DRS 反复拟合,两者之间的差异由特定的目标函数描述,以放大 500-600 纳米波长处的血液吸收,并根据第一步拟合的 fm、fb 和 tpws 估算 Dves、dpws 和 tpws。结果表明,两步法显著提高了反演精度,fm、fb、tpws 和 dpws 的平均误差均小于 5%。
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引用次数: 0
A Stand-Off Laser-Induced Breakdown Spectroscopy (LIBS) System for Remote Bacteria Identification 用于远程细菌鉴定的独立式激光诱导击穿光谱仪 (LIBS) 系统。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1002/jbio.202400332
Yong Cheng, Shuqing Wang, Fei Chen, Jiahui Liang, Yan Zhang, Lei Zhang, Wangbao Yin, Suotang Jia, Liantuan Xiao

Bacteria are the primary cause of infectious diseases, making rapid and accurate identification crucial for timely pathogen diagnosis and disease control. However, traditional identification techniques such as polymerase chain reaction and loop-mediated isothermal amplification are complex, time-consuming, and pose infection risks. This study explores remote (~3 m) bacterial identification using laser-induced breakdown spectroscopy (LIBS) with a Cassegrain reflective telescope. Principal component analysis (PCA) was employed to reduce the dimensionality of the LIBS spectral data, and the accuracy of support vector machine (SVM) and Random Forest (RF) algorithms was compared. Multiple repeated experiments showed that the RF model achieved a classification accuracy, recall, precision, and F1-score of 99.81%, 99.80%, 99.79%, and 0.9979, respectively, outperforming the SVM model and providing more accurate remote bacterial identification. The method based on laser-induced plasma spectroscopy and machine learning has broad application prospects, supporting noncontact disease diagnosis, improving public health, and advancing medical research and technological development.

细菌是传染病的主要病原体,因此快速准确的鉴定对于及时诊断病原体和控制疾病至关重要。然而,聚合酶链反应和环介导等温扩增等传统鉴定技术复杂、耗时,而且存在感染风险。本研究利用卡塞格伦反射式望远镜的激光诱导击穿光谱(LIBS)技术,探索远程(约 3 米)细菌鉴定。研究采用主成分分析(PCA)来降低 LIBS 光谱数据的维度,并比较了支持向量机(SVM)和随机森林(RF)算法的准确性。多次重复实验表明,RF 模型的分类准确率、召回率、精确率和 F1 分数分别达到 99.81%、99.80%、99.79% 和 0.9979,优于 SVM 模型,能提供更准确的远程细菌鉴定。基于激光诱导等离子体光谱和机器学习的方法具有广阔的应用前景,可支持非接触式疾病诊断,改善公共卫生,推动医学研究和技术发展。
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引用次数: 0
The Effect of Cryotherapy on Buccal Blood Vessels Evaluated by Optical Coherence Tomography Angiography: A Pilot Study 通过光学相干断层扫描血管造影术评估冷冻疗法对颊面血管的影响:试点研究。
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1002/jbio.202400318
Anton A. Plekhanov, Nidjat A. Guseynov, Elena B. Kiseleva, Saddam V. Bopkhoev, Arseniy L. Potapov, Ashrf B. I. Ali, Alexander A. Moiseev, Valentina M. Ryabova, Sergey Y. Ivanov, Alexander A. Muraev, Natalia D. Gladkova, Marina A. Sirotkina

While cryotherapy is one of the traditional ways to reduce postoperative complications in maxillofacial surgery, the cooling degree is not regulated in most cases and the achieved effect is not properly controlled. Therefore, to develop optimal cooling modes, we propose to study the buccal vascular response to cooling, which has not been previously shown. To evaluate the effect of cooling, we analyzed vessel networks using optical coherence tomography angiography (OCT-A). The cheek vessels were OCT-A monitored using cooling by an ice bag/cooling mask. We found the advantages of using a cooling mask over an ice bag consist of a statistically significant decrease in the perfused vessel density (PVD) of the papillary layer at the oral mucosa. The absence of the reticular layer vessel reaction to any type of cooling was noted. We argue for the necessity to develop optimal modes of cryotherapy, which will contribute to blood perfusion reduction and reduction of PVD recovery.

虽然冷冻疗法是减少颌面外科术后并发症的传统方法之一,但在大多数情况下,冷却程度没有得到调节,所取得的效果也没有得到适当控制。因此,为了开发出最佳的冷却模式,我们建议研究颊面血管对冷却的反应,这在以前还没有显示过。为了评估冷却效果,我们使用光学相干断层血管造影术(OCT-A)分析了血管网络。在使用冰袋/冷却面罩冷却的情况下,对颊面血管进行了 OCT-A 监测。我们发现,与冰袋相比,使用冷却面罩的优势在于,口腔黏膜乳头层灌注血管密度(PVD)在统计学上显著降低。我们注意到网状层血管对任何类型的冷却都没有反应。我们认为有必要开发出最佳的冷冻治疗模式,这将有助于减少血液灌注和降低 PVD 恢复。
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引用次数: 0
The Regulation of Cerebral Lymphatic Drainage in the Transverse Sinus Region of the Mouse Brain 小鼠大脑横窦区脑淋巴引流的调节作用
IF 2.8 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-18 DOI: 10.1002/jbio.202400250
Zengjun Xie, Zhihui He, Zhen Yuan, Miao Wang, Feifan Zhou
Cerebral lymphatic drainage is an important pathway for metabolic waste clearance in the brain, which plays a crucial role in the progression of central nervous system diseases. Recent studies have shown that norepinephrine (NE) is involved in the regulation of cerebral lymphatic drainage function, but the modulation mechanism remains unknown. In this study, we confirmed that NE rapidly reduced glymphatic influx and enhanced meningeal lymphatic clearance. Moreover, the transverse sinus (TS) was the vital region of cerebral lymphatic drainage regulation by NE. Further analysis revealed that NE inhibition could simultaneously enhance glymphatic drainage and dorsal meningeal lymphatic drainage, mainly acting on the TS region. This study demonstrated that the cerebral lymphatic drainage system can be regulated by NE, with the TS region serving as the primary modulating site. The findings provide a potential regulatory target for the amelioration of neurological diseases associated with cerebral lymphatic drainage function.
脑淋巴引流是清除脑内代谢废物的重要途径,在中枢神经系统疾病的进展中起着至关重要的作用。最近的研究表明,去甲肾上腺素(NE)参与了脑淋巴引流功能的调节,但其调节机制尚不清楚。在本研究中,我们证实 NE 能迅速减少脑淋巴液的流入,并增强脑膜淋巴液的清除。此外,横窦(TS)是 NE 调节脑淋巴引流的重要区域。进一步的分析表明,抑制 NE 可同时增强甘液引流和背侧脑膜淋巴引流,主要作用于 TS 区域。这项研究表明,脑淋巴引流系统可受 NE 调节,而 TS 区是主要的调节部位。这些发现为改善与脑淋巴引流功能相关的神经系统疾病提供了潜在的调节靶点。
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引用次数: 0
Sensitivity of Frequency Domain Near Infrared Spectroscopy for Neurovascular Structure Detection in Biotissue Volume: Numerical Modeling Results 频域近红外光谱用于生物组织体积中神经血管结构检测的灵敏度:数值建模结果
IF 2.8 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-11 DOI: 10.1002/jbio.202400291
Mariia Belsheva, Larisa Safonova, Alexey Shkarubo
Through numerical modeling, it has been determined that near infrared spectroscopy with a frequency domain approach can detect neurovascular structures with diameters from 0.5 mm at source‐detector distances of 5–8 mm, depending on optical parameters and technical implementation of the method. Among the five classical machine learning methods considered, quadratic discriminant analysis is the most effective for detection. Furthermore, it has been demonstrated that the use of a photomultiplier tube and the registration of both amplitude and phase signal components exhibit the highest sensitivity. Spectroscopy can rival modern ultrasound for detecting arterial vessels. A cross‐shaped probe configuration improves sensitivity, and the ratio of reduced scattering coefficient values at different wavelengths is informative for blood‐filled vessel detection. These findings are consistent with and significantly extend previous experimental in vivo and in situ studies and could be valuable for intraoperative diagnostic tasks, particularly in neurosurgery.
通过数值建模,可以确定采用频域方法的近红外光谱技术可以在光源-探测器距离为 5-8 毫米的情况下检测到直径为 0.5 毫米的神经血管结构,具体取决于光学参数和该方法的技术实施情况。在五种经典的机器学习方法中,二次判别分析是最有效的检测方法。此外,使用光电倍增管和登记振幅和相位信号分量的灵敏度最高。在检测动脉血管方面,光谱技术可与现代超声技术相媲美。十字形探头配置提高了灵敏度,不同波长的减散射系数值之比对充血血管检测具有参考价值。这些发现与之前的体内和原位实验研究一致,并大大扩展了这些研究,对于术中诊断任务,尤其是神经外科手术,可能很有价值。
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引用次数: 0
Fast Multiphoton Microscopic Imaging Joint Image Super-Resolution for Automated Gleason Grading of Prostate Cancers 用于前列腺癌格里森自动分级的快速多光子显微成像联合图像超级分辨率
IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-11 DOI: 10.1002/jbio.202400233
Xinpeng Huang, Qianqiong Wang, Jia He, Chaoran Ban, Hua Zheng, Hong Chen, Xiaoqin Zhu

Gleason grading system is dependable for quantifying prostate cancer. This paper introduces a fast multiphoton microscopic imaging method via deep learning for automatic Gleason grading. Due to the contradiction between multiphoton microscopy (MPM) imaging speed and quality, a deep learning architecture (SwinIR) is used for image super-resolution to address this issue. The quality of low-resolution image is improved, which increased the acquisition speed from 7.55 s per frame to 0.24 s per frame. A classification network (Swin Transformer) was introduced for automated Gleason grading. The classification accuracy and Macro-F1 achieved by training on high-resolution images are respectively 90.9% and 90.9%. For training on super-resolution images, the classification accuracy and Macro-F1 are respectively 89.9% and 89.9%. It shows that super-resolution image can provide a comparable performance to high-resolution image. Our results suggested that MPM joint image super-resolution and automatic classification methods hold the potential to be a real-time clinical diagnostic tool for prostate cancer diagnosis.

格里森分级系统是量化前列腺癌的可靠方法。本文介绍了一种通过深度学习自动进行格里森分级的快速多光子显微成像方法。由于多光子显微镜(MPM)成像速度和质量之间的矛盾,深度学习架构(SwinIR)被用于图像超分辨率以解决这一问题。低分辨率图像的质量得到改善,采集速度从每帧 7.55 秒提高到每帧 0.24 秒。引入了一个分类网络(Swin Transformer),用于自动进行 Gleason 分级。通过在高分辨率图像上进行训练,分类准确率和 Macro-F1 分别达到了 90.9% 和 90.9%。在超分辨率图像上进行训练时,分类准确率和 Macro-F1 分别为 89.9% 和 89.9%。这表明超分辨率图像可以提供与高分辨率图像相当的性能。我们的研究结果表明,MPM 联合图像超分辨率和自动分类方法有望成为前列腺癌诊断的实时临床诊断工具。
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引用次数: 0
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Journal of Biophotonics
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