Axell Rodriguez, Yana Purvinsh, Aidan P. Holman, Dmitry Kurouski
Seasonal and sporadic viral infections put enormous burdens on global health and society. Although polymerase chain reaction (PCR) and other molecular approaches can be used to detect and identify viruses, they require substantial sample processing time and often have limited portability, limiting their utility in point-of-care settings. In the current study, we investigate the accuracy of direct sensing of two bacteriophages using chemically modified gold nanorods (AuNRs). We demonstrate that when using functionalized polyethylene glycol (PEG), the surface of AuNRs can be modified with desired antibodies against a particular pathogen. Furthermore, PEG protects and passivates the surface of AuNRs against unspecific binding of biomolecules that can be present in the body fluids. We also showed that dynamic light scattering (DLS) was capable of detecting virus-bound AuNRs, enabling confirmatory detection of viruses. These results indicate that antibody-modified AuNRs can be used for the confirmatory detection of various viruses.
{"title":"Direct Detection of Viruses Using Antibody-Modified Gold Nanorods","authors":"Axell Rodriguez, Yana Purvinsh, Aidan P. Holman, Dmitry Kurouski","doi":"10.1002/jbio.202500417","DOIUrl":"10.1002/jbio.202500417","url":null,"abstract":"<p>Seasonal and sporadic viral infections put enormous burdens on global health and society. Although polymerase chain reaction (PCR) and other molecular approaches can be used to detect and identify viruses, they require substantial sample processing time and often have limited portability, limiting their utility in point-of-care settings. In the current study, we investigate the accuracy of direct sensing of two bacteriophages using chemically modified gold nanorods (AuNRs). We demonstrate that when using functionalized polyethylene glycol (PEG), the surface of AuNRs can be modified with desired antibodies against a particular pathogen. Furthermore, PEG protects and passivates the surface of AuNRs against unspecific binding of biomolecules that can be present in the body fluids. We also showed that dynamic light scattering (DLS) was capable of detecting virus-bound AuNRs, enabling confirmatory detection of viruses. These results indicate that antibody-modified AuNRs can be used for the confirmatory detection of various viruses.</p>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 2","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12861120/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145395506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Scleral plaque spots and pigmentation dots have significant potential for non-invasive disease diagnosis. However, the high intra-class variability in their size, shape, and distribution across individuals poses a critical challenge for automated and robust detection in complex scleral images. This study presents an integrated system that combines sclera imaging and object detection to overcome these challenges. First, a specially designed sclera imaging device is employed to obtain the high quality and shadowless scleral images. Then, an improved YOLOv5 model is proposed, incorporating three key enhancements: a CBAM module to suppress redundant information, a series of Mamba blocks to expand the model's receptive field in scleral images, and a small head strategy to enhance the detection effectiveness on small objects. The proposed detection algorithm was validated on three disparate scleral datasets. The experimental results demonstrate that the proposed method can effectively detect scleral spots and dots, featuring robust and generalizable performance.
{"title":"Robust and Generalizable Detection of Scleral Spots and Dots in Complex Ocular Surfaces With Attention and Mamba-Enhanced YOLOv5","authors":"Hantao Bai, Zongqing Ma, Chuxiang Gao, Fan Fan, Xiaochen Meng, Xiaoqing Zhang, Jiang Zhu","doi":"10.1002/jbio.202500406","DOIUrl":"10.1002/jbio.202500406","url":null,"abstract":"<div><p>Scleral plaque spots and pigmentation dots have significant potential for non-invasive disease diagnosis. However, the high intra-class variability in their size, shape, and distribution across individuals poses a critical challenge for automated and robust detection in complex scleral images. This study presents an integrated system that combines sclera imaging and object detection to overcome these challenges. First, a specially designed sclera imaging device is employed to obtain the high quality and shadowless scleral images. Then, an improved YOLOv5 model is proposed, incorporating three key enhancements: a CBAM module to suppress redundant information, a series of Mamba blocks to expand the model's receptive field in scleral images, and a small head strategy to enhance the detection effectiveness on small objects. The proposed detection algorithm was validated on three disparate scleral datasets. The experimental results demonstrate that the proposed method can effectively detect scleral spots and dots, featuring robust and generalizable performance.</p></div>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 2","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145380467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Hong Cheng, Si Cheng, Fen Zhang, Ruiying Lu, Wei Lu, Zihao Teng
The depth of field limitations of the microscope optical system make it impossible for a single image to clearly represent the structure of the sample at different depths simultaneously. While multifocal fusion integrates sharp areas from multiple focal planes to achieve wide-field high-resolution imaging, current methods have edge artifacts due to poor background suppression and inadequate edge enhancement. To effectively alleviate this key challenge, a multifocal micro-image fusion method based on background optimization and edge enhancement is proposed. The method first performs saturation-based background optimization processing on microscopic images, and then uses an edge enhancement algorithm and an adjacency filter to extract the decision maps and infographics corresponding to the structural layer and detail layer, respectively. Experimental results show that the proposed method has significant advantages in subjective and quantitative evaluation, and can improve edge information transfer (QAB/F) by up to 30% while reducing edge artifacts.
{"title":"Multifocus Microscopy Image Fusion Based on Background Optimization and Edge Enhancement","authors":"Hong Cheng, Si Cheng, Fen Zhang, Ruiying Lu, Wei Lu, Zihao Teng","doi":"10.1002/jbio.202500419","DOIUrl":"10.1002/jbio.202500419","url":null,"abstract":"<div><p>The depth of field limitations of the microscope optical system make it impossible for a single image to clearly represent the structure of the sample at different depths simultaneously. While multifocal fusion integrates sharp areas from multiple focal planes to achieve wide-field high-resolution imaging, current methods have edge artifacts due to poor background suppression and inadequate edge enhancement. To effectively alleviate this key challenge, a multifocal micro-image fusion method based on background optimization and edge enhancement is proposed. The method first performs saturation-based background optimization processing on microscopic images, and then uses an edge enhancement algorithm and an adjacency filter to extract the decision maps and infographics corresponding to the structural layer and detail layer, respectively. Experimental results show that the proposed method has significant advantages in subjective and quantitative evaluation, and can improve edge information transfer (<i>Q</i><sup>AB/F</sup>) by up to 30% while reducing edge artifacts.</p></div>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 2","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145373527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Iasmin Pereira Cabral Miranda, Marcos Venicius Bentes do Nascimento, Pablo Fabiano Moura das Neves, Maria Clara Pinheiro do Nascimento, Fernanda Caroline de Jesus Viana, Mayara Carolina Jorge Moraes, Emili Beatriz Chaves de Brito, Fabiane Yasmin de Miranda Lobato, Rayanne Mesquita Bendelack, Elizabeth Alves Ferreira, Givago da Silva Souza, João Simão de Melo Neto
This study evaluated the potential of near-infrared spectroscopy (NIRS) as a noninvasive tool to assess pelvic floor muscle oxygenation in young adult women. Thirty-eight participants were divided into a control group (rest) and an activation group (phasic and sustained contractions). Measurements were obtained with the Humon Hex device placed on the skin overlying the bulbospongiosus and superficial transverse muscles. Muscle activation, especially during maximum sustained voluntary contraction, resulted in significant oxygenation changes, with greater variability in the activation group. The bulbospongiosus showed higher sensitivity, whereas the transverse muscle presented more stable responses. Despite limitations related to sensor adaptation and signal stability, NIRS detected differences in metabolic demands between rest and activation when placed on the skin surface. These findings support NIRS as a potential and comfortable alternative to transvaginal intracavitary techniques, contributing to objective evaluation, prevention, and rehabilitation strategies in women's pelvic health.
{"title":"Near-Infrared Spectroscopy as a Resource for Assessing the Rest and Activation of Pelvic Floor Muscles in Young Adult Women: A Cross-Sectional Study","authors":"Iasmin Pereira Cabral Miranda, Marcos Venicius Bentes do Nascimento, Pablo Fabiano Moura das Neves, Maria Clara Pinheiro do Nascimento, Fernanda Caroline de Jesus Viana, Mayara Carolina Jorge Moraes, Emili Beatriz Chaves de Brito, Fabiane Yasmin de Miranda Lobato, Rayanne Mesquita Bendelack, Elizabeth Alves Ferreira, Givago da Silva Souza, João Simão de Melo Neto","doi":"10.1002/jbio.202500255","DOIUrl":"10.1002/jbio.202500255","url":null,"abstract":"<p>This study evaluated the potential of near-infrared spectroscopy (NIRS) as a noninvasive tool to assess pelvic floor muscle oxygenation in young adult women. Thirty-eight participants were divided into a control group (rest) and an activation group (phasic and sustained contractions). Measurements were obtained with the Humon Hex device placed on the skin overlying the bulbospongiosus and superficial transverse muscles. Muscle activation, especially during maximum sustained voluntary contraction, resulted in significant oxygenation changes, with greater variability in the activation group. The bulbospongiosus showed higher sensitivity, whereas the transverse muscle presented more stable responses. Despite limitations related to sensor adaptation and signal stability, NIRS detected differences in metabolic demands between rest and activation when placed on the skin surface. These findings support NIRS as a potential and comfortable alternative to transvaginal intracavitary techniques, contributing to objective evaluation, prevention, and rehabilitation strategies in women's pelvic health.</p>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 2","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/jbio.202500255","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145350814","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Siddharth Pal, Hemant Krishna, Srinibas Satapathy, Shovan K. Majumder
Spectral imaging extends the capabilities of conventional microscopy by incorporating spectral information into spatially resolved images, enabling enhanced characterization of biological specimens. This paper presents a multimodal microscopic spectral imaging (MmSI) system that integrates spectral and temporal-spectral scanning for comprehensive microscopic analysis. The MmSI system employs a liquid crystal tunable filter (LCTF) to achieve flexible spectral selection and high spatial resolution, facilitating transmission hyperspectral imaging (THSI), fluorescence hyperspectral imaging (FHSI), and multi-wavelength time-lapse imaging. A custom-developed graphical user interface synchronizes the LCTF and CCD camera for efficient acquisition of spatial, spectral, and temporal-spectral data. System calibration and characterization in the spatial, spectral, and temporal domains, including linearity assessment with respect to exposure time and emission intensity, confirm its quantitative accuracy. The effectiveness and reliability of the system are demonstrated through validation experiments conducted on model systems, demonstrating its versatility for advanced biomedical research, particularly in the investigation of dynamic biological processes.
{"title":"Development of Multimodal Microscopic Imaging System Capable of Hyperspectral and Multi-Wavelength Time-Lapse Imaging for Biomedical Applications","authors":"Siddharth Pal, Hemant Krishna, Srinibas Satapathy, Shovan K. Majumder","doi":"10.1002/jbio.202500359","DOIUrl":"10.1002/jbio.202500359","url":null,"abstract":"<div><p>Spectral imaging extends the capabilities of conventional microscopy by incorporating spectral information into spatially resolved images, enabling enhanced characterization of biological specimens. This paper presents a multimodal microscopic spectral imaging (MmSI) system that integrates spectral and temporal-spectral scanning for comprehensive microscopic analysis. The MmSI system employs a liquid crystal tunable filter (LCTF) to achieve flexible spectral selection and high spatial resolution, facilitating transmission hyperspectral imaging (THSI), fluorescence hyperspectral imaging (FHSI), and multi-wavelength time-lapse imaging. A custom-developed graphical user interface synchronizes the LCTF and CCD camera for efficient acquisition of spatial, spectral, and temporal-spectral data. System calibration and characterization in the spatial, spectral, and temporal domains, including linearity assessment with respect to exposure time and emission intensity, confirm its quantitative accuracy. The effectiveness and reliability of the system are demonstrated through validation experiments conducted on model systems, demonstrating its versatility for advanced biomedical research, particularly in the investigation of dynamic biological processes.</p></div>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 2","pages":""},"PeriodicalIF":2.0,"publicationDate":"2025-10-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145331453","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}