We report the draft genome sequence of an extensively drug-resistant and metallo-beta-lactamase-producing Escherichia coli Ne7 strain isolated from a urinary tract infection patient. Under the O8:H9 serotype and F phylogenetic group, this strain had a sequence type of ST648, five replicon plasmids, 16 virulence genes, and 21 antibiotic resistance genes.
We report the draft genome sequences of 94 multidrug-resistant Salmonella isolates (S. Infantis, Enteritidis, and Typhimurium) from organic and conventional retail chickens in Maryland, USA (average genome size = 4.97 Mb; guanine-cytosine content = 52.12%). These isolates harbored diverse antimicrobial resistance and virulence genes, Salmonella pathogenicity islands, and plasmids, highlighting potential public health risks.
Sneathia vaginalis, a fastidious pathogen of the female reproductive tract, is implicated in obstetric and gynecologic pathologies, including spontaneous preterm birth and bacterial vaginosis. Here, we report the successful cultivation and genomic sequencing of three Sneathia vaginalis isolates collected via a vaginal swab from a patient with bacterial vaginosis.
Bacteriophage PensacolaC28 is a lytic phage isolated on Microbacterium sp. Casco Bay (NCMA B81), a marine bacterium originally cultured in South Portland, Maine, USA. PensacolaC28 was isolated from an environmental sample collected in Pensacola, Florida, USA. It is a singleton siphovirus with a 16,749 bp genome and contains 24 protein coding genes.
This study presents the genome sequence of Bacteroides fragilis strain 86-5443-2-2, isolated from a piglet. The genome of this strain forms a single contig spanning 5.4 million base pairs with a 43.5% GC content and 4,480 genes. Notably, this bacterium possesses two copies of a pathogenic island capable of producing enterotoxins.
We report the draft genome sequence of Salmonella enterica subsp. diarizonae serovar 17: l,v:z isolated from a nose-horned viper (Vipera ammodytes) in Republic of Serbia which might be considered a new serovar of Salmonella.
We report the whole genome sequences of Paenibacillus kyungheensis KACC 18744T, Sphingomonas naphthae KACC 18716T, and Novosphingobium humi KACC 19094T, to investigate the genomic diversity of bacterial type strains distributed in Korea.
Arctic ground squirrels (Urocitellus parryii) hibernate for several months without eating or drinking yet suffer no disuse atrophy. We are investigating the potential contributions of gut microorganisms to host nitrogen homeostasis, and here, we describe the genome assemblies of 35 isolated bacteria collected from gastrointestinal material and sequenced using Nanopore technology.
The gut microbiome of the European honey bee (Apis mellifera) is vital to its health, yet large-scale studies are scarce. We present metagenomic sequencing data from 180 samples collected near and far from eight crops across Canada over 2 years. These data sets will help address various biological and environmental questions.
Here, we report the draft whole genome sequence of an endophytic fungal species, Alternaria alternata P02PL2 isolated from Sclerocarya birrea. The genome of this isolate was sequenced using the MGISEQ 2000RS platform. The estimated genome size for A. alternata P02PL2 was 32.0 Mb with a GC content of 50.56%.
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