We obtained the near-complete simian foamy virus (SFV) genome from an infected human bitten by an African green monkey (Chlorocebus aethiops; SFVcae_hu501). The genome is 13,062 nucleotides long with the classical SFV genome structure. Phylogenetically, SFVcae_hu501 clustered closely with SFV from Ch. aethiops (SFVagm_LK3).
We present the genomes of nine cultured microbes isolated from two freshwater sites in Wellesley, MA. The dataset is useful for exploring genomic diversity among freshwater taxa, including Pedobacter, Pseudomonas, Rhodoferax, Rouxiella, and Flavobacterium.
Here, we report the complete genome sequence of Chryseobacterium sp. strain KCF3-3, isolated from the body surface of channel catfish, Ictalurus punctatus. The de novo assembly revealed a chromosome size of 5,623,437 bp with an estimated 4,939 open reading frames.
Leptolyngbya phage Dor1 was induced by mitomycin C from a fishpond and was isolated on Leptolyngbya boryana IU 594. The 41,522-bp genome of Leptolyngbya phage Dor1 has 93.77% intergenomic similarity with Leptolyngbya phage LPP-1; however, unlike LPP-1, Dor1 carries an HNH endonuclease in its DNA polymerase gene.
Lactiplantibacillus brownii was recently reported as a novel species. Here, we present the whole-genome sequence of Lactiplantibacillus brownii strain MH-1 isolated from homemade pickled Chinese cabbage in Japan. These genomic data have the potential to help clarify the role of Lactiplantibacillus species in fermented foods.
We report the complete genome sequence of a penicillin-resistant Fusobacterium necrophorum subsp. funduliforme isolate, AJ79, from a tonsillitis patient. The AJ79 genome consists of a chromosome (2,440,359 bp) and plasmid (9,887 bp), providing insights into the genetic basis of penicillin resistance in F. necrophorum and its implications for treating tonsillitis.
The draft genome sequence of Levilactobacillus brevis CHEE98, isolated from cheese, is presented here. The whole-genome assembly is 2.7 Mbp in size, with a GC content of 45.67%, and includes 2,731 predicted protein-coding genes.
We report here the complete genome sequence of Neobacillus sp. strain OS1-2, a bacterium isolated from apple orchard soil and possessing a complete set of denitrification functional genes in its genome. The isolate was observed to perform denitrification under aerobic and anaerobic conditions.
Salmonella enterica is a Gram-negative inhabitant of the gastrointestinal tract of warm-blooded animals and commonly implicated in foodborne illness. Here, we describe the isolation of Salmonella enterica phage SeKF_80. The 89,965 bp genome contains 174 predicted coding sequences with 44 predicted functions. Phage SeKF_80 shares species-level similarity with Salmonella phages 7-11.
A lytic bacteriophage, BAU.Micro_SLP-22, was isolated from drain water in search of bio-controlling agents against avian salmonellosis. The phage genome is comprised of 59,738 bp with 56.96% guanine-cytosine content, encoding 81 protein-coding genes containing no transfer RNAs, antibiotic resistance, virulence, temperate marker, and clustered regularly interspaced short palindromic repeat coding sequences.
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