We report draft whole-genome sequences of three extensively drug-resistant Mycobacterium tuberculosis strains (UM29, UM64, and UM66) isolated in Morocco in 2013. These assemblies support resistance profiling, molecular epidemiology, and comparative genomics. Raw sequencing reads and genome assemblies are publicly accessible through the NCBI database under BioProject PRJNA1302428.
The bacterium Phascolarctobacterium faecium frequently colonizes the human gut and has been reported to have reduced abundance in people with Crohn's disease. Here, we report the complete genome sequences of two P. faecium strains isolated from mucosal-luminal interface samples taken from pediatric participants with/without Crohn's disease.
A novel Sphingobium yanoikuyae strain, CC4533, was isolated from a contaminated tris-acetate-phosphate medium culture plate of a green microalga, Chlamydomonas reinhardtii. In this study, we present the complete genome sequence of this beta-carotene-synthesizing, xenobiotic-degrading, and heavy metal-tolerant strain, providing insights into its metabolic capabilities and phylogenetic relationships.
During an investigation of Burkholderia species from agricultural soils in Mexico, Burkholderia semiarida was isolated from the rhizosphere of Theobroma cacao L. growing in Chiapas, Mexico. Here, we present the draft genome of Burkholderia semiarida CLM7-1.
We report the complete genome sequence of the wine yeast strain Saccharomyces cerevisiae I-118. It was isolated from yeast sediment formed after spontaneous fermentation of Rkatsiteli grapes and is used to produce white wines. Genomic data provide the basis for linking the genotype of this strain with its oenological properties.
The genus Cellulomonas comprises aerobic, Gram-positive, rod-shaped bacteria commonly present in the soil and aquatic environments. Herein, we report the isolation of Cellulomonas sp. GTC20042 from human bile and the complete genome sequence of this strain, consisting of a 4,145,753-bp circular chromosome.
Here, we report on the complete genome sequence of Escherichia coli EPI300. This strain harbors an inducible plasmid copy number control system supporting DNA library production and functional screening applications. PacBio long-read sequencing and assembly resolved a closed circular reference genome useful for mapping and editing the EPI300 genetic operating system.
Here, we present the closed genome sequences of nine representative clinical Listeria monocytogenes isolates from nine invasive listeriosis outbreaks in Germany that were associated with contaminated salmon products. More than half of the genomes contained two or more intact prophages.
We report the complete genome sequences of three endophytic Pseudomonas putida isolates from Agave salmiana, assembled using Illumina NovaSeq and PacBio HiFi sequencing. Genome sizes were 6,282,325 bp (PP_P5), 6,511,513 bp (PP_P9), and 6,284,694 bp (PP_P43), respectively.
Ice and water microbial communities from Lake Winnipeg were explored through V4 region 16S rRNA gene sequencing during a pronounced period of cold temperatures over North America's Great Plains and Great Lakes regions. Diatoms, cyanobacteria, and Xanthomonadales (Gammaproteobacteria) displayed patterns of partitioning into ice fractions.
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