We report the genome sequences of two syntrophic gram-negative bacteria, Syntrophomonas erecta GB4-38T and Syntrophomonas erecta subsp. sporosyntropha 5-3-ZT, which degrade C4-C8 short-chain fatty acids when grown in co-culture with a suitable hydrogen-consuming microbial strain.
We report the complete genome sequence of Caulobacter vibrioides CB2A JS4038. This strain is a variant of C. vibrioides CB2A containing genotypic changes needed to host a plasmid-encoded S-layer display system. PacBio long-read sequencing and assembly provide a closed reference genome, constraining the chromosomal location of these changes.
We report the complete genome sequence of Rahnella sp. PAMC25559, isolated from Zugspitz glacier, Austria. The complete genome assembly was generated, consisting of one chromosome and two putative plasmid sequences. The genome includes biosynthetic gene clusters potentially related to cold adaptation and plant growth-promoting activity.
We report the draft genome sequence of Mammaliicoccus sciuri strain BAU-MFRK-Mam-2025 isolated from phuchka samples in Mymensingh, Bangladesh. The 2.78 Mb genome (GC 32.8%, genome coverage 50×) harbors multiple antibiotic resistance genes, underscoring its potential threat to food safety, antimicrobial resistance dissemination, and public health.
Here, we report the complete genome sequencing of a new Mycobacterium sp. nov. from a compromised Japanese individual with hematological malignancy. This will represent the essential data for future phylogenetic and comparative genome studies and will be useful for better understanding the evolution of the pathogen.
Peribacillus frigoritolerans is a widely distributed gram-positive bacterium that exhibits several notable characteristics. Here, we report the complete genome sequence of the P. frigoritolerans strain NBTC-101, which was isolated from the rhizosphere soil of melons. This genome sequence will help elucidate the ecological role of P. frigoritolerans.
We report draft whole-genome sequences of three extensively drug-resistant Mycobacterium tuberculosis strains (UM29, UM64, and UM66) isolated in Morocco in 2013. These assemblies support resistance profiling, molecular epidemiology, and comparative genomics. Raw sequencing reads and genome assemblies are publicly accessible through the NCBI database under BioProject PRJNA1302428.
This study reports the draft genome of an Acinetobacter baumannii strain niger01 co-producing blaNDM-1, blaOXA-23, and blaOXA-69 genes. The genome size is 4,084,803 bp, 39.0% GC content, and harbors several insertion sequences. The emergence of new high-risk clones presents an escalating problem that significantly challenges the public health system.
Technical hurdles are a significant barrier for deposition of next-generation sequence data in public repositories. We present q2-ena-uploader, a software package for automated validation and upload of sequence data. It is BSD-3-licensed and available at https://github.com/bokulich-lab/q2-ena-uploader.
This study reports the draft genome sequence of Flavobacterium sp. MAHUQ-57, a strain isolated from the soil sample of a rice field located in Dighalgram, Magura, Bangladesh, in 2019. The genome consists of a 3,472,804 base pair chromosome assembled into 23 contigs, encoding 3,202 predicted protein-coding genes.
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