Varsha Chauhan, Anupriya Singh, Rohan Arora, Kamal Shrivastava, Swati Kathait, Sanjay Kumar, Anuj K Bhatnagar, Mandira Varma-Basil
We report the draft genome of Mycolicibacterium conceptionense, a rapidly growing nontuberculous mycobacterium, isolated from the sputum sample of a patient undergoing treatment for multidrug-resistant tuberculosis in Delhi, India. The 6,366,717-bp genome contains 6,124 coding sequences, one 5S rRNA, three 16S rRNAs, six 23S rRNAs, and 49 tRNAs.
{"title":"Draft genome sequence of <i>Mycolicibacterium conceptionense</i> isolated from the sputum sample of a patient with pulmonary tuberculosis.","authors":"Varsha Chauhan, Anupriya Singh, Rohan Arora, Kamal Shrivastava, Swati Kathait, Sanjay Kumar, Anuj K Bhatnagar, Mandira Varma-Basil","doi":"10.1128/mra.00724-24","DOIUrl":"https://doi.org/10.1128/mra.00724-24","url":null,"abstract":"<p><p>We report the draft genome of <i>Mycolicibacterium conceptionense</i>, a rapidly growing nontuberculous mycobacterium, isolated from the sputum sample of a patient undergoing treatment for multidrug-resistant tuberculosis in Delhi, India. The 6,366,717-bp genome contains 6,124 coding sequences, one 5S rRNA, three 16S rRNAs, six 23S rRNAs, and 49 tRNAs.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
We sequenced the genomes of three multidrug-resistant Pseudomonas putida strains namely 11CM-M1, 11CM-F1, and 11CM-S1, isolated from milk, feces, and farm soil samples collected from dairy cows with clinical mastitis. The assembled draft genomes of these P. putida strains were approximately 5.6 Mbp, with a GC content of 62.4%.
{"title":"Draft genome sequencing of multidrug-resistant <i>Pseudomonas putida</i> strains, isolated from dairy cows with clinical mastitis and their farm environment.","authors":"Tima Tisa Mallick, Naim Siddique, Md Morshedur Rahman, Khaled Hassan Shuvo, Ziban Chandra Das, M Nazmul Hoque","doi":"10.1128/mra.00886-24","DOIUrl":"https://doi.org/10.1128/mra.00886-24","url":null,"abstract":"<p><p>We sequenced the genomes of three multidrug-resistant <i>Pseudomonas putida</i> strains namely 11CM-M1, 11CM-F1, and 11CM-S1, isolated from milk, feces, and farm soil samples collected from dairy cows with clinical mastitis. The assembled draft genomes of these <i>P. putida</i> strains were approximately 5.6 Mbp, with a GC content of 62.4%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mohammed A Samad, Anowar Hossen, Md Rezaul Karim, A S M Ashab Uddin, Dipu Roy, Khairun Nahar Shithi, Mst Nazia Akter, Taposh Kumar Das, Paul W Selleck, Dieter M Bulach, Timothy R Bowden
Lumpy skin disease (LSD) is an economically devasting and vector-borne transboundary disease of cattle caused by lumpy skin disease virus (LSDV). Here, we report the complete genome sequence of an outbreak isolate of LSDV from Bangladesh. Bangladesh LSD-29 was detected in skin nodule samples of an LSD-infected bovine in 2021.
{"title":"Complete genome sequence of a lumpy skin disease virus isolate from a 2021 outbreak of disease in Bangladesh.","authors":"Mohammed A Samad, Anowar Hossen, Md Rezaul Karim, A S M Ashab Uddin, Dipu Roy, Khairun Nahar Shithi, Mst Nazia Akter, Taposh Kumar Das, Paul W Selleck, Dieter M Bulach, Timothy R Bowden","doi":"10.1128/mra.00667-24","DOIUrl":"https://doi.org/10.1128/mra.00667-24","url":null,"abstract":"<p><p>Lumpy skin disease (LSD) is an economically devasting and vector-borne transboundary disease of cattle caused by lumpy skin disease virus (LSDV). Here, we report the complete genome sequence of an outbreak isolate of LSDV from Bangladesh. Bangladesh LSD-29 was detected in skin nodule samples of an LSD-infected bovine in 2021.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
We report, for the first time, the draft genomes of four multidrug-resistant Pseudomonas asiatica strains isolated from milk (2M1), feces (2F1 and 2F2), and farm soil (2S1) samples of dairy cows with clinical mastitis. The assembled genomes of these strains were 5.7 Mbp, 62.8% G + C content, and 50× genome coverage.
我们首次报道了从患有临床乳腺炎的奶牛的牛奶(2M1)、粪便(2F1 和 2F2)和农场土壤(2S1)样本中分离出的四株耐多药的亚洲假单胞菌的基因组草案。这些菌株的组装基因组为 5.7 Mbp,G + C 含量为 62.8%,基因组覆盖率为 50×。
{"title":"Draft genome sequencing of multidrug-resistant <i>Pseudomonas asiatica</i> strains isolated from dairy cows with clinical mastitis and their farm environment.","authors":"Taniya Sultana, Naim Siddique, Monira Rahaman, Md Morshedur Rahman, Anm Aminoor Rahman, Anup Kumar Talukder, Ziban Chandra Das, M Nazmul Hoque","doi":"10.1128/mra.00907-24","DOIUrl":"https://doi.org/10.1128/mra.00907-24","url":null,"abstract":"<p><p>We report, for the first time, the draft genomes of four multidrug-resistant <i>Pseudomonas asiatica</i> strains isolated from milk (2M1), feces (2F1 and 2F2), and farm soil (2S1) samples of dairy cows with clinical mastitis. The assembled genomes of these strains were 5.7 Mbp, 62.8% G + C content, and 50× genome coverage.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469998","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Polina Guro, Anna Sazanova, Andrey Belimov, Denis Karlov, Irina Kuznetsova, Vera Safronova
In this article, we report the complete genome sequence of Microbacteriun strain A8/3-1 isolated from the root nodule of Oxytropis tragacanthoides Fisch. ex DC., growing in the Altai region, Russia. The sequence was obtained using Oxford Nanopore Technologies MinION.
{"title":"Complete genome sequence of <i>Microbacterium</i> strain A8/3-1 isolated from the root nodule of <i>Oxytropis tragacanthoides</i>, growing in the Altai region.","authors":"Polina Guro, Anna Sazanova, Andrey Belimov, Denis Karlov, Irina Kuznetsova, Vera Safronova","doi":"10.1128/mra.00817-24","DOIUrl":"https://doi.org/10.1128/mra.00817-24","url":null,"abstract":"<p><p>In this article, we report the complete genome sequence of <i>Microbacteriun</i> strain A8/3-1 isolated from the root nodule of <i>Oxytropis tragacanthoides</i> Fisch. ex DC., growing in the Altai region, Russia. The sequence was obtained using Oxford Nanopore Technologies MinION.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mycoplasma gallisepticum strain A5969 is one of the earliest identified and studied avian mycoplasma strains, valued for its ease of growth and production of uniformly sized colonies. Here, we report the genomic sequence of the A5969 strain.
{"title":"Genome sequence of <i>Mycoplasma gallisepticum</i> strain A5969.","authors":"Spencer A Leigh, Jeff D Evans","doi":"10.1128/mra.00813-24","DOIUrl":"https://doi.org/10.1128/mra.00813-24","url":null,"abstract":"<p><p><i>Mycoplasma gallisepticum</i> strain A5969 is one of the earliest identified and studied avian mycoplasma strains, valued for its ease of growth and production of uniformly sized colonies. Here, we report the genomic sequence of the A5969 strain.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470001","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Here, we report a draft metagenome-assembled genome and annotation of Pseudomonas sp. obtained from the sequenced genome of Vaucheria bursata. The genome completeness was 97.9% with a total of 5,322 open reading frames, of which 3,147 genes were annotated. The availability of the metagenome will elucidate the possible epiphytic interactions of bacteria with Vaucheria bursata.
{"title":"Metagenome-assembled genome of <i>Pseudomonas</i> sp. from coenocytic alga <i>Vaucheria bursata</i>.","authors":"Gerardo Laureano, Abdiel Esparra Bermudez, Ramón E Rivera Vicéns, Alok Arun","doi":"10.1128/mra.00485-24","DOIUrl":"https://doi.org/10.1128/mra.00485-24","url":null,"abstract":"<p><p>Here, we report a draft metagenome-assembled genome and annotation of <i>Pseudomonas</i> sp. obtained from the sequenced genome of <i>Vaucheria bursata</i>. The genome completeness was 97.9% with a total of 5,322 open reading frames, of which 3,147 genes were annotated. The availability of the metagenome will elucidate the possible epiphytic interactions of bacteria with <i>Vaucheria bursata</i>.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470005","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Breah LaSarre, Mark L Watson, Emma M Corby, Amelia M Randich
Fretibacter rubidus is a dimorphic, prosthecate member of the family Maricaulaceae, order Caulobacterales, in the class Alphaproteobacteria. Here, we report the genome of type strain JCM 15585T (JC2236T), sequenced with Oxford Nanopore Technology.
{"title":"Complete genome sequence of marine prosthecate bacterium <i>Fretibacter rubidus</i> type strain JCM 15585.","authors":"Breah LaSarre, Mark L Watson, Emma M Corby, Amelia M Randich","doi":"10.1128/mra.00986-24","DOIUrl":"https://doi.org/10.1128/mra.00986-24","url":null,"abstract":"<p><p><i>Fretibacter rubidus</i> is a dimorphic, prosthecate member of the family <i>Maricaulaceae</i>, order Caulobacterales, in the class Alphaproteobacteria. Here, we report the genome of type strain JCM 15585<sup>T</sup> (JC2236<sup>T</sup>), sequenced with Oxford Nanopore Technology.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Serratia plymuthica strain SWSY-3.47 is a Gram-negative, rod-shaped bacteria isolated for its high chitinolytic activity. Here, we report the complete genome of this strain comprised of a single circular chromosome of 5,636,345 bp with a G + C content of 56.0%.
Serratia plymuthica 菌株 SWSY-3.47 是一种革兰氏阴性杆状细菌,因其具有较高的几丁质溶解活性而被分离出来。在此,我们报告了该菌株的完整基因组,它由一个 5,636,345 bp 的单环染色体组成,G + C 含量为 56.0%。
{"title":"Complete genome sequence of <i>Serratia plymuthica</i> SWSY-3.47.","authors":"Himari Takahashi, Tomoro Warashina, Yui Takahashi, Mayuki Tanaka, Kazushi Suzuki, Teppei Morita, Kazuharu Arakawa","doi":"10.1128/mra.00815-24","DOIUrl":"https://doi.org/10.1128/mra.00815-24","url":null,"abstract":"<p><p><i>Serratia plymuthica</i> strain SWSY-3.47 is a Gram-negative, rod-shaped bacteria isolated for its high chitinolytic activity. Here, we report the complete genome of this strain comprised of a single circular chromosome of 5,636,345 bp with a G + C content of 56.0%.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142469978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The economically important Cyanobacterial genus Limnospira is commercially utilized as a dietary supplement and nutraceutical agent. We present the whole-genome sequence of Limnospira fusiformis NRMCF6962 and was isolated from Kondakarla Ava Lake of Visakhapatnam, Andhra Pradesh, India.
具有重要经济价值的蓝细菌属 Limnospira 可作为膳食补充剂和营养保健品进行商业利用。我们展示了从印度安得拉邦维萨卡帕特南的 Kondakarla Ava 湖中分离到的 Limnospira fusiformis NRMCF6962 的全基因组序列。
{"title":"Whole-genome sequence of <i>Limnospira fusiformis</i> NRMCF6962, isolated from lake water.","authors":"Fayaazuddin Thajuddin, Chandru Ashok, Shakena Fathima Thajuddin, Thajuddin Nooruddin, Dhanasekaran Dharumadurai, Olubukola Oluranti Babalola","doi":"10.1128/mra.00855-24","DOIUrl":"https://doi.org/10.1128/mra.00855-24","url":null,"abstract":"<p><p>The economically important Cyanobacterial genus <i>Limnospira</i> is commercially utilized as a dietary supplement and nutraceutical agent. We present the whole-genome sequence of <i>Limnospira fusiformis</i> NRMCF6962 and was isolated from Kondakarla Ava Lake of Visakhapatnam, Andhra Pradesh, India.</p>","PeriodicalId":18654,"journal":{"name":"Microbiology Resource Announcements","volume":null,"pages":null},"PeriodicalIF":0.7,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142470009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}