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High throughput sequencing in the diagnosis and surveillance of tick-borne diseases: A narrative review 高通量测序在蜱传疾病诊断和监测中的应用综述
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-26 DOI: 10.1016/j.onehlt.2025.101312
Yannick-Ibrahim Bisso , Olivier Duron , Olivier Plantard , Gilles Prevost , Benoit Jaulhac , Pierre Boyer
Ticks are blood-feeding arthropods that can transmit a wide variety of microorganisms (bacteria, viruses, protozoa, and filarial nematodes) when they feed on various vertebrate hosts. In the recent years, high-throughput sequencing (HTS), also called next-generation sequencing, has become a key tool for detecting and characterizing microorganisms, whether they are pathogens or part of the tick's own microbiota. This narrative review summarizes current applications of HTS for the surveillance and diagnosis of tick-borne diseases within a One Health framework.
From nucleic acids extracted from a tick sample, HTS enables the possibility of simultaneous detection of multiple microorganisms, and provides valuable information on potential reservoir hosts through blood meal analysis. It has revealed a vast diversity of bacterial, viral, protozoan agents and filarial nematodes in various tick species worldwide, including unexpected or novel pathogens. HTS has also improved our understanding of the tick microbiota and how it interacts with pathogens, which could have an impact on vector competence.
In the field of microbiological diagnosis, HTS provides a complementary or alternative approach to traditional diagnostic tests, particularly in cases with non-specific symptoms or when the etiology is unknown. HTS has proven to be effective in detecting rare or novel pathogens, including some transmitted by ticks. It has also enabled the reconstruction of whole genomes of microorganisms from clinical samples or ticks, thereby improving our understanding of the molecular epidemiology of these agents.
By bridging the vector, its pathogens, the reservoir host, and human or animal clinical outcomes, HTS represents a cornerstone technology for future integrated surveillance systems of TBDs within a One Health perspective.
蜱是一种以血液为食的节肢动物,当它们以各种脊椎动物为食时,可以传播多种微生物(细菌、病毒、原生动物和丝状线虫)。近年来,高通量测序(HTS),也被称为下一代测序,已经成为检测和表征微生物的关键工具,无论它们是病原体还是蜱虫自身微生物群的一部分。这篇叙述性综述总结了目前在“同一个健康”框架下HTS在监测和诊断蜱传疾病方面的应用。从蜱虫样本中提取的核酸,HTS使同时检测多种微生物成为可能,并通过血粉分析提供潜在宿主的有价值信息。它揭示了世界各地各种蜱虫物种中细菌、病毒、原生动物制剂和丝状线虫的巨大多样性,包括意想不到的或新的病原体。HTS还提高了我们对蜱虫微生物群及其如何与病原体相互作用的理解,这可能对媒介能力产生影响。在微生物诊断领域,高温高温检测法为传统诊断检测提供了一种补充或替代方法,特别是在出现非特异性症状或病因不明的情况下。HTS已被证明在检测罕见或新型病原体方面是有效的,包括一些由蜱虫传播的病原体。它还可以重建临床样本或蜱虫的微生物全基因组,从而提高我们对这些病原体的分子流行病学的理解。通过将病媒、其病原体、宿主以及人类或动物的临床结果联系起来,高通量技术是“同一个健康”视角下未来TBDs综合监测系统的基石技术。
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引用次数: 0
Using participatory epidemiology to understand differences in tick-borne disease perceptions from homeowners in the Ohio River valley 使用参与式流行病学来了解俄亥俄河谷房主对蜱传疾病的看法差异
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-26 DOI: 10.1016/j.onehlt.2025.101309
Emily G. Bache , Paulina Matzkin , Jessica Fleming , Risa Pesapane , Danielle M. Tufts
Tick-borne diseases (TBDs) are the most common vector-borne diseases reported annually in the United States. Lyme disease, caused primarily by the spirochetal bacterium Borrelia burgdorferi sensu stricto (s.s.) affects an estimated 476,000 people each year. Borrelia burgdorferi is transmitted by the tick Ixodes scapularis and is maintained in an enzootic cycle with small mammal reservoirs in the eastern United States. Since B. burgdorferi can infect humans and domestic animals, Lyme disease is an important One Health concern between humans and animals. People residing in endemic areas are likely to possess differences in knowledge and protective behaviors compared to people living in areas where Lyme disease is newly emerging. To better understand behavioral differences and perspectives of Lyme disease and other TBDs in these areas, elements of participatory epidemiology were incorporated by surveying homeowners from a Lyme disease endemic area (southwestern Pennsylvania) and an emerging area (eastern Ohio). The survey covered three main areas of interest: perceived risk of tick exposure and TBD health risks, personal protection methods used to prevent or reduce exposure to tick bites, and protection methods to reduce tick presence on residential properties. The results of our study suggest that residents in endemic regions may be more educated and aware of TBD risk and prevention methods based on their belief that TBDs pose at least a minor health risk. Additionally, more Pennsylvania residents used tick-bite prevention methods while outdoors on their property. Residents in Ohio were unlikely to make any changes to protect themselves or their property from ticks, which may be a result of a lack of education or motivation to change their behaviors. The findings from this study can inform public health education and interventions to increase awareness and reduce the risk of TBDs in endemic and emerging areas.
蜱传疾病(tbd)是最常见的媒介传播疾病报告在美国每年。莱姆病主要由严格意义的螺旋体细菌伯氏疏螺旋体引起,每年估计影响476 000人。伯氏疏螺旋体由肩胛骨蜱传播,并在美国东部的小型哺乳动物宿主中保持地方性循环。由于伯氏疏螺旋体可感染人类和家畜,莱姆病是人类和动物之间一个重要的健康问题。与生活在莱姆病新发地区的人们相比,生活在莱姆病流行地区的人们在知识和保护行为方面可能存在差异。为了更好地了解这些地区莱姆病和其他tbd的行为差异和观点,通过对莱姆病流行地区(宾夕法尼亚州西南部)和新兴地区(俄亥俄州东部)的房主进行调查,纳入了参与式流行病学的要素。该调查涵盖了三个主要领域:蜱虫暴露的感知风险和TBD健康风险,用于预防或减少蜱虫叮咬暴露的个人保护方法,以及减少住宅物业中蜱虫存在的保护方法。我们的研究结果表明,疫区居民可能会在认为TBD至少会造成轻微健康风险的基础上,对TBD风险和预防方法进行更多的教育和认识。此外,更多的宾夕法尼亚州居民在户外使用蜱虫叮咬预防方法。俄亥俄州的居民不太可能做出任何改变来保护自己或他们的财产免受蜱虫的侵害,这可能是缺乏改变行为的教育或动机的结果。本研究结果可为流行地区和新兴地区的公共卫生教育和干预措施提供信息,以提高认识并降低TBDs的风险。
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引用次数: 0
The niche of Borrelia burgdorferi sensu lato in Europe is predictable and mappable 伯氏疏螺旋体在欧洲的生态位是可以预测和绘制的
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-24 DOI: 10.1016/j.onehlt.2025.101313
Agustín Estrada-Peña , Julie Davis , James H. Stark , Patrick H. Kelly
Classic environmental niche modelling to examine the distribution of the causative agent of Lyme borreliosis Borrelia burgdorferi sensu lato (Bb) in the Western Palearctic, is often inadequate because it depends on both its tick vector(s), like Ixodes ricinus, and vertebrate reservoirs. We aimed to better determine, identify, and map the geographic distribution of Bb genospecies compiling data from 15,032 I. ricinus samples and over 6.5 million vertebrate records across 103 genera. We leveraged Species Stacking Distribution Modelling and Principal Components Analysis to identify communities of co-occurring vertebrates and their associations between Bb prevalence in host-seeking Ixodes nymphs and. Four vertebrate communities were revealed, with one strongly linked as primary reservoirs to Bb geographic range. Distribution of Bb in southern Europe was limited by the absence of I. ricinus despite suitable reservoirs, while in northern regions, a lack of competent reservoirs restricts its spread. The Bb prevalence in questing ticks correlates significantly (R2 = 0.89) with the presence of key reservoirs rather than overall vertebrate diversity which suggests the Bb niche is predictable and tied to specific vertebrate-tick co-occurrences. We compiled a dataset with the climate, vegetation, and vertebrate-derived variables linked to the transmission pressure of Bb to humans for the complete European territory, aiming for the prevention of infection in humans. This research underscores the importance of integrating reservoir species and tick distribution data to better map and predict Bb spread. By capturing the effects of climate and community composition on the occurrence of Bb in Europe, this framework provides insights for tracking Lyme borreliosis at a continental-level.
经典的环境生态位模型用于检查莱姆病伯氏疏螺旋体(Bb)病原体在古北西部的分布,通常是不充分的,因为它依赖于其蜱虫媒介,如蓖麻伊蚊和脊椎动物宿主。为了更好地确定、鉴定和绘制Bb基因种的地理分布,我们收集了15032份蓖麻样本和超过650万份脊椎动物记录,涵盖103个属。我们利用物种堆叠分布模型和主成分分析来确定共发生的脊椎动物群落及其在寻找寄主的伊蚊若虫和伊蚊中Bb患病率之间的关系。发现了4个脊椎动物群落,其中一个是Bb地理范围的主要储集层。Bb在南欧的分布受到蓖麻I. ricinus缺乏的限制,尽管有合适的水库,而在北部地区,缺乏合格的水库限制了它的传播。在蜱虫中,Bb患病率与关键宿主的存在显著相关(R2 = 0.89),而不是与整体脊椎动物多样性相关,这表明Bb生态位是可预测的,并且与特定的脊椎动物-蜱虫共同出现有关。我们编制了一个数据集,其中包括气候、植被和脊椎动物衍生的变量,这些变量与整个欧洲领土的Bb向人类传播压力有关,旨在预防人类感染。该研究强调了整合宿主物种和蜱虫分布数据对更好地绘制和预测Bb传播的重要性。通过捕捉气候和群落组成对欧洲莱姆病发生的影响,该框架为在大陆层面追踪莱姆病提供了见解。
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引用次数: 0
Genomic epidemiology and phylogeographic reconstruction of West Nile virus 2 in Italy from 2011 to 2023 2011 - 2023年意大利西尼罗病毒2型的基因组流行病学和系统地理重建
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-24 DOI: 10.1016/j.onehlt.2025.101310
Carla della Ventura , Maya Carrera , Francesco Defilippo , Davide Lelli , Chiara Nogarol , Maria Lucia Mandola , Alessia Lai , Annalisa Bergna , Francesca Moroni , Ana Moreno , Gianguglielmo Zehender
Since its introduction to Europe in 2004, West Nile Virus Lineage 2 (WNV-2) has become endemic, with Italy reporting the highest number of cases each season. In 2022, WNV infections in Italy exceeded those recorded during the major 2018 outbreak—the largest ever reported in Europe. This study investigates the genomic epidemiology of WNV during the 2022 and 2023 transmission seasons.
We analyzed 123 environmental samples from wild birds and mosquito pools collected between May and October 2022–2023 in northwestern Italy. All but one sample belonged to Lineage 2; lineage 1 was detected in two bird samples, with one showing co-infection. A total of 98 complete genomes were sequenced.
Phylogeographic reconstruction indicated the origin of the main European clade in Hungary in 2004, with introduction into Italy between 2009 and 2010. Most Italian genomes clustered within a single highly supported subclade, with one sampled in the Marche region in 2011 as the outgroup. Continuous phylogeographic analysis suggested the Italian WNV-2 clade originated in 2009 in the area between Emilia-Romagna and Lombardy, followed by east-west spread during 2022–2023.
Several mutations were identified, including F49L in the NS2A gene linked to neuronal tropism, and M184V in the NS4B gene, associated with increased pathogenicity.
Our results highlight how integrated genomic surveillance of WNV, combining whole genome sequencing and phylogenetic analyses to environmental samples, can support One Health approaches for early detection and risk assessment of arboviral transmission.
自2004年传入欧洲以来,西尼罗病毒2系(WNV-2)已成为地方性流行病,意大利报告的每个季节病例数最多。2022年,意大利的西尼罗河病毒感染人数超过了2018年主要疫情期间记录的人数,这是欧洲有史以来报告的最多的一次。本研究调查了2022年和2023年传播季节西尼罗河病毒的基因组流行病学。我们分析了2022-2023年5月至10月在意大利西北部收集的123份野生鸟类和蚊子池环境样本。除了一个样本外,所有样本都属于《天堂2》;在两个鸟类样本中检测到1型谱系,其中一个显示共感染。共测序了98个完整基因组。系统地理学重建表明,主要的欧洲分支起源于2004年的匈牙利,并在2009年至2010年之间引入意大利。大多数意大利人的基因组聚集在一个高度支持的亚支系中,2011年在马尔凯地区采样的一个亚支系是外支系。连续的系统地理学分析表明,意大利WNV-2进化支起源于2009年的艾米利亚-罗马涅和伦巴第之间的地区,随后在2022-2023年间向东传播。研究发现了几种突变,包括与神经元倾向相关的NS2A基因中的F49L,以及与致病性增加相关的NS4B基因中的M184V。我们的研究结果强调了西尼罗河病毒的综合基因组监测,结合全基因组测序和环境样本的系统发育分析,可以支持One Health早期发现和风险评估虫媒病毒传播的方法。
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引用次数: 0
Knowledge, attitudes, and practices of women related to human and animal feces management in Ethiopia: Evidence for strengthening water, sanitation, and hygiene (WaSH) initiatives 埃塞俄比亚妇女与人类和动物粪便管理相关的知识、态度和做法:加强水、环境卫生和个人卫生(WaSH)倡议的证据
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-23 DOI: 10.1016/j.onehlt.2025.101311
Birhanu Hadush , Chaltu Fikru , Girma Kebede , Syum Guesh , Enquebaher Kassaye , Getachew Redae , Kebede Amenu , Lisa Cavalerie , Siobhan M. Mor

Background

Water, sanitation, and hygiene (WaSH) programs aim to prevent feco-oral disease transmission, but their effectiveness in low- and middle-income countries is often compromised by frequent exposure to animal feces. In Ethiopia, national initiatives such as the Health Extension Program and Community-Led Total Sanitation and Hygiene program have expanded WaSH coverage but do not currently address animal-associated risks. This study investigated knowledge, attitudes, and practices related to human and animal feces management in Butajira, Gilgel Gibe, and Kilite Awlaelo Health and Demographic Surveillance Sites (HDSS) in Ethiopia.

Methods

A community-based, cross-sectional study was conducted through random sampling of households in selected kebeles across the three HDSS sites. Eligible households owned up to 60 livestock, including at least one head of cattle. Adult women (n = 1129) were interviewed using a structured questionnaire on WaSH and livestock husbandry, including manure management. Descriptive statistics were used to summarise practices across sites.

Results

The median age of participants ranged from 35 to 45 years, with female-headed households most frequent in Butajira (42.2 %). Literacy levels were lowest in Gilgel Gibe (64.1 % illiteracy). Most households accessed improved water sources, though unimproved sources were important in Gilgel Gibe (16.3 %). Improved toilet facilities were most common in Gilgel Gibe (61 %). At least 79 % of respondents reported handwashing after toilet use, with moderate soap use (>73 %). Manure management was primarily the responsibility of adult women (>74 %), often using bare hands. Handwashing with soap after manure handling was common in Kilite Awlaelo (>97 %) but lower in Butajira (86.3 %) and Gilgel Gibe (74.8 %). Awareness of health risks from animal manure was lower than for human feces, especially in Gilgel Gibe (70 %) and Butajira (53.2 %). Similarly, awareness of the benefits of composting or drying manure to prevent germ spread was lower in these sites.

Conclusions

Despite high awareness of WaSH-related risks, critical gaps exist in understanding manure-associated health risks, particularly in Butajira and Gilgel Gibe. Targeted interventions are needed to raise awareness and improve manure management, especially among women.
地下水、环境卫生和个人卫生(WaSH)项目旨在预防粪口疾病的传播,但这些项目在低收入和中等收入国家的有效性往往受到频繁接触动物粪便的影响。在埃塞俄比亚,健康推广计划和社区主导的全面环境卫生和个人卫生计划等国家举措扩大了讲卫生的覆盖面,但目前还没有解决与动物有关的风险。本研究调查了埃塞俄比亚Butajira、Gilgel Gibe和Kilite Awlaelo健康和人口监测点(HDSS)与人类和动物粪便管理相关的知识、态度和做法。方法采用基于社区的横断面研究,在三个HDSS站点的选定kebeles进行随机抽样。符合条件的家庭拥有最多60头牲畜,包括至少一头牛。使用结构化问卷对成年妇女(n = 1129)进行了关于WaSH和畜牧业(包括粪便管理)的访谈。描述性统计用于总结各站点的实践。结果调查对象年龄中位数为35 ~ 45岁,其中以女户主家庭居多(42.2%)。Gilgel Gibe的识字率最低(64.1%)。大多数家庭获得了改善的水源,尽管未改善的水源在Gilgel Gibe很重要(16.3%)。改善厕所设施在Gilgel Gibe最为普遍(61%)。至少79%的答复者报告如厕后洗手,并适度使用肥皂(73%)。粪肥管理主要由成年妇女(74%)负责,她们常常赤手空投。处理粪便后用肥皂洗手在Kilite Awlaelo(97%)很常见,但在Butajira(86.3%)和Gilgel Gibe(74.8%)较低。动物粪便对健康风险的认识低于人类粪便,特别是在Gilgel Gibe(70%)和Butajira(53.2%)。同样,在这些地点,人们对堆肥或干燥粪便防止细菌传播的好处的认识也较低。结论:尽管人们高度认识到与wash相关的风险,但在了解与粪便相关的健康风险方面存在严重差距,特别是在Butajira和Gilgel Gibe。需要采取有针对性的干预措施,以提高认识并改善粪便管理,特别是在妇女中。
{"title":"Knowledge, attitudes, and practices of women related to human and animal feces management in Ethiopia: Evidence for strengthening water, sanitation, and hygiene (WaSH) initiatives","authors":"Birhanu Hadush ,&nbsp;Chaltu Fikru ,&nbsp;Girma Kebede ,&nbsp;Syum Guesh ,&nbsp;Enquebaher Kassaye ,&nbsp;Getachew Redae ,&nbsp;Kebede Amenu ,&nbsp;Lisa Cavalerie ,&nbsp;Siobhan M. Mor","doi":"10.1016/j.onehlt.2025.101311","DOIUrl":"10.1016/j.onehlt.2025.101311","url":null,"abstract":"<div><h3>Background</h3><div>Water, sanitation, and hygiene (WaSH) programs aim to prevent feco-oral disease transmission, but their effectiveness in low- and middle-income countries is often compromised by frequent exposure to animal feces. In Ethiopia, national initiatives such as the Health Extension Program and Community-Led Total Sanitation and Hygiene program have expanded WaSH coverage but do not currently address animal-associated risks. This study investigated knowledge, attitudes, and practices related to human and animal feces management in Butajira, Gilgel Gibe, and Kilite Awlaelo Health and Demographic Surveillance Sites (HDSS) in Ethiopia.</div></div><div><h3>Methods</h3><div>A community-based, cross-sectional study was conducted through random sampling of households in selected kebeles across the three HDSS sites. Eligible households owned up to 60 livestock, including at least one head of cattle. Adult women (<em>n</em> = 1129) were interviewed using a structured questionnaire on WaSH and livestock husbandry, including manure management. Descriptive statistics were used to summarise practices across sites.</div></div><div><h3>Results</h3><div>The median age of participants ranged from 35 to 45 years, with female-headed households most frequent in Butajira (42.2 %). Literacy levels were lowest in Gilgel Gibe (64.1 % illiteracy). Most households accessed improved water sources, though unimproved sources were important in Gilgel Gibe (16.3 %). Improved toilet facilities were most common in Gilgel Gibe (61 %). At least 79 % of respondents reported handwashing after toilet use, with moderate soap use (&gt;73 %). Manure management was primarily the responsibility of adult women (&gt;74 %), often using bare hands. Handwashing with soap after manure handling was common in Kilite Awlaelo (&gt;97 %) but lower in Butajira (86.3 %) and Gilgel Gibe (74.8 %). Awareness of health risks from animal manure was lower than for human feces, especially in Gilgel Gibe (70 %) and Butajira (53.2 %). Similarly, awareness of the benefits of composting or drying manure to prevent germ spread was lower in these sites.</div></div><div><h3>Conclusions</h3><div>Despite high awareness of WaSH-related risks, critical gaps exist in understanding manure-associated health risks, particularly in Butajira and Gilgel Gibe. Targeted interventions are needed to raise awareness and improve manure management, especially among women.</div></div>","PeriodicalId":19577,"journal":{"name":"One Health","volume":"22 ","pages":"Article 101311"},"PeriodicalIF":4.5,"publicationDate":"2025-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145927022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic diversity and occurrence of antibiotic resistance genes from community wastewater in Dhaka and Cox's Bazar, Bangladesh 孟加拉国达卡和考克斯巴扎尔社区废水中抗生素耐药基因的遗传多样性和发生情况
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-20 DOI: 10.1016/j.onehlt.2025.101301
Akash Saha , Rashedul Hasan , Jenifar Quaiyum Ami , Md Mahmudul Hasan , Nuhu Amin , Rehnuma Haque , Mahbubur Rahman , Farjana Jahan , Rezaul Hasan , Pengbo Liu , Christine L. Moe , Mohammad Enayet Hossain , Mohammed Ziaur Rahman

Objectives

Antibiotic resistance genes (ARGs), one of the key drivers of the growing antibiotic resistance, present a formidable public health concern. Wastewater may act as a key repository for both antibiotic-resistant bacteria and ARGs, facilitating their transfer across microbial communities. Given the limited knowledge of clinically relevant ARGs in community wastewater of Bangladesh, this study explored the genetic diversity and occurrence of ARGs from community wastewater discharges using a culture-independent approach.

Methods

Wastewater samples (n = 70) were collected from different sites in Dhaka and Cox's Bazar between April and May 2023. These samples underwent Nanotrap®-based culture-independent microbial concentration, followed by nucleic acid extraction and purification. Nine clinically important ARGs (blaTEM, blaCTX-M, blaSHV, blaKPC, blaNDM, blaOXA, mcr-1, tolC, and acrA) were detected using uniplex polymerase chain reaction (PCR), followed by Sanger sequencing. Bioinformatic analyses further explored the genetic diversity of the ARGs, as well as mutational analysis and molecular docking of Klebsiella pneumoniae carbapenemase (KPC).

Results

blaTEM, blaCTX-M, blaOXA, tolC, and acrA were the most frequently detected ARGs (90 % each), followed by blaNDM (85.7 %), blaKPC (84.3 %), blaSHV (77.1 %), and mcr-1 (52.9 %). The frequency of all ARGs was higher in Cox's Bazar compared to Dhaka, except for mcr-1. Co-occurrences of all nine ARGs were observed in 47.1 % of samples. Mutational analysis of KPC revealed unique missense mutations, and further docking demonstrated altered binding affinities and interactions between KPC-2 mutants and β-lactam antibiotics.

Conclusion

Our study provides the baseline data of clinically significant ARGs in local community wastewater in Bangladesh, reflecting the need for further surveillance to identify hotspots and guide antibiotic stewardship and wastewater management policies.
目的抗生素耐药基因(ARGs)是抗生素耐药性增长的关键驱动因素之一,是一个令人担忧的公共卫生问题。废水可以作为耐药细菌和ARGs的关键储存库,促进它们在微生物群落之间的转移。鉴于孟加拉国社区废水中临床相关ARGs的知识有限,本研究采用非培养方法探讨了社区废水排放中ARGs的遗传多样性和发生情况。方法于2023年4 - 5月在达卡和考克斯巴扎尔不同地点采集污水样本70份。这些样品经过Nanotrap®培养独立的微生物浓度,然后核酸提取和纯化。采用单链聚合酶链反应(PCR)检测9种临床重要ARGs (blaTEM、blaCTX-M、blaSHV、blaKPC、blaNDM、blaOXA、mcr-1、tolC和acrA),然后进行Sanger测序。生物信息学分析进一步探索了ARGs的遗传多样性,并对肺炎克雷伯菌碳青霉烯酶(KPC)进行了突变分析和分子对接。结果bladem、blaCTX-M、blaOXA、tolC和acrA是最常检出的ARGs(各占90%),其次是blaNDM(85.7%)、blaKPC(84.3%)、blaSHV(77.1%)和mcr-1(52.9%)。除mcr-1外,考克斯巴扎尔所有arg的发生频率均高于达卡。在47.1%的样本中观察到所有9种ARGs的共同出现。KPC的突变分析揭示了独特的错义突变,进一步对接表明KPC-2突变体与β-内酰胺类抗生素的结合亲和力和相互作用发生了改变。结论本研究提供了孟加拉国当地社区废水中具有临床意义的ARGs的基线数据,反映了进一步监测以确定热点并指导抗生素管理和废水管理政策的必要性。
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引用次数: 0
Invasive alien mammals pose zoonotic risks to human health in Europe 外来入侵哺乳动物对欧洲人类健康构成人畜共患风险
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-19 DOI: 10.1016/j.onehlt.2025.101307
Paola Monguilod , Belinda Gallardo
The rise in zoonotic diseases is accelerating, with climate change expected to further intensify this trend. Invasive Alien Species (IAS) play an important role in the emergence and spread of zoonotic diseases by introducing both existing and novel pathogens to the regions they invade. Despite this, research on the role of IAS in spreading zoonotic diseases remains limited. Our study investigated the zoonotic risks posed by eight invasive mammal species prioritized for management in Europe. On average, each species was found to transmit 16 pathogens capable of causing severe diseases in humans, including Echinococcosis, Leptospirosis, Lyme neuroborreliosis, and Encephalitis.
We identified central and western Europe as significant disease hotspots. Climate change is facilitating the expansion of IAS into new areas, as warmer temperatures make previously inhospitable regions suitable. Future projections indicate a northeastward shift in their suitability by 2050. These changes vary by species, with the Siberian chipmunk losing up to 45 % of its suitability, while the gray squirrel could see a 26 % increase under a high-emissions scenario.
Finally, we found that 71 % of the human population lives in areas highly suitable for IAS establishment. Our findings underscore the health risks associated with IAS and highlight the need for further research into their role in disease dynamics. Addressing this issue is essential for developing effective public health strategies and mitigating future zoonotic disease outbreaks.
人畜共患疾病的增加正在加速,预计气候变化将进一步加剧这一趋势。外来入侵物种(IAS)通过将现有的和新的病原体引入它们所入侵的地区,在人畜共患疾病的出现和传播中发挥重要作用。尽管如此,关于IAS在人畜共患疾病传播中的作用的研究仍然有限。本研究调查了欧洲优先管理的8种入侵哺乳动物所带来的人畜共患病风险。平均而言,每个物种被发现传播16种能够引起人类严重疾病的病原体,包括棘球蚴病、钩端螺旋体病、莱姆病神经螺旋体病和脑炎。我们确定中欧和西欧是重要的疾病热点。气候变化正在促进IAS扩展到新的领域,因为温度升高使以前不适宜居住的地区变得适宜。未来的预测表明,到2050年,它们的适宜性将向东北转移。这些变化因物种而异,西伯利亚花栗鼠失去了高达45%的适宜性,而在高排放情景下,灰松鼠的适宜性可能会增加26%。最后,我们发现71%的人口生活在非常适合建立IAS的地区。我们的研究结果强调了与IAS相关的健康风险,并强调需要进一步研究它们在疾病动态中的作用。解决这一问题对于制定有效的公共卫生战略和减轻未来人畜共患疾病暴发至关重要。
{"title":"Invasive alien mammals pose zoonotic risks to human health in Europe","authors":"Paola Monguilod ,&nbsp;Belinda Gallardo","doi":"10.1016/j.onehlt.2025.101307","DOIUrl":"10.1016/j.onehlt.2025.101307","url":null,"abstract":"<div><div>The rise in zoonotic diseases is accelerating, with climate change expected to further intensify this trend. Invasive Alien Species (IAS) play an important role in the emergence and spread of zoonotic diseases by introducing both existing and novel pathogens to the regions they invade. Despite this, research on the role of IAS in spreading zoonotic diseases remains limited. Our study investigated the zoonotic risks posed by eight invasive mammal species prioritized for management in Europe. On average, each species was found to transmit 16 pathogens capable of causing severe diseases in humans, including Echinococcosis, Leptospirosis, Lyme neuroborreliosis, and Encephalitis.</div><div>We identified central and western Europe as significant disease hotspots. Climate change is facilitating the expansion of IAS into new areas, as warmer temperatures make previously inhospitable regions suitable. Future projections indicate a northeastward shift in their suitability by 2050. These changes vary by species, with the Siberian chipmunk losing up to 45 % of its suitability, while the gray squirrel could see a 26 % increase under a high-emissions scenario.</div><div>Finally, we found that 71 % of the human population lives in areas highly suitable for IAS establishment. Our findings underscore the health risks associated with IAS and highlight the need for further research into their role in disease dynamics. Addressing this issue is essential for developing effective public health strategies and mitigating future zoonotic disease outbreaks.</div></div>","PeriodicalId":19577,"journal":{"name":"One Health","volume":"22 ","pages":"Article 101307"},"PeriodicalIF":4.5,"publicationDate":"2025-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145927065","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tracing the roots of One Health principles in nursing practice 在护理实践中追溯同一个健康原则的根源
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-19 DOI: 10.1016/j.onehlt.2025.101306
Júlio Belo Fernandes , Sónia Fernandes , Cidália Castro , Diana Vareta
This article examines the historical roots of the One Health concept and highlights its deep convergence with Florence Nightingale's Environmental Theory. Although One Health gained prominence in the early 2000s, its intellectual foundations are much older, encompassing Indigenous knowledge systems, nineteenth-century public health, and the work of Virchow, Osler, and Schwabe. Through a historical–conceptual analysis of Nightingale's writings and key One Health milestones, the article shows how her emphasis on environmental determinants, stewardship of natural and built environments, systematic observation, statistical evidence, and coordinated cross-sectoral action anticipated core One Health principles. Five areas of convergence are identified: prevention focused on environmental determinants, environmental stewardship, data-informed decision making, transdisciplinary collaboration, and continuous system improvement. The article argues that Nightingale's legacy positions nursing as a strategic actor in the local implementation of One Health, particularly in designing therapeutic and healthy environments and integrating environmental indicators into care, governance, and health policy.
本文考察了“一个健康”概念的历史根源,并强调了它与弗洛伦斯·南丁格尔的环境理论的深度趋同。尽管“同一健康”在21世纪初获得了突出的地位,但它的知识基础要古老得多,包括土著知识体系、19世纪的公共卫生,以及维尔肖、奥斯勒和施瓦贝的工作。通过对南丁格尔的著作和关键的“一个健康”里程碑的历史概念分析,文章展示了她对环境决定因素、自然和建筑环境管理、系统观察、统计证据和协调跨部门行动的强调如何预测了“一个健康”的核心原则。确定了五个趋同领域:以环境决定因素为重点的预防、环境管理、基于数据的决策、跨学科合作和持续的系统改进。文章认为,南丁格尔的遗产将护理定位为“一个健康”在当地实施中的战略角色,特别是在设计治疗和健康环境以及将环境指标纳入护理、治理和卫生政策方面。
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引用次数: 0
A claim for plant health as a key component of the one health concept 声称植物健康是一个健康概念的关键组成部分
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-18 DOI: 10.1016/j.onehlt.2025.101304
Ramon Albajes , María M. López , Rafael M. Jiménez Díaz
The concept of health has historically been more closely linked to the well-being of humans than to that of animals, plants or the environment. In contrast, the One Health concept, which emerged in recent decades, generally recognizes the interdependence of only three of its four components: humans, wild and domestic animals, and the environment, but plants have often been overlooked in this analysis. Because plant health has been undervalued within the One Health framework, we emphasize in this review its importance in ensuring food security and safety, two key issues in human and animal health, as highlighted in several of the United Nations SDG. Food production, marketing and consumption use a significant portion of the environment's natural resources, and plant health technology must ensure their sustainable use while safeguarding environmental health. We summarize the relationships between the four components of One Health, highlighting the development of antimicrobial resistance in human, animal and plant pathogens, and the resistance to plant protection products among plant pests, diseases and weeds. Three external drivers significantly influence plant health and One Health in the last decades: climate change, invasive alien species, and the international armed conflicts. The main reported effects of climate change on plant health include the shifts in distribution area, biology and life cycles of harmful organisms as well as plant-pest interactions. Another major factor compromising the sustainability of current plant health technology is the introduction and establishment of alien organisms affecting vegetables resulting from the increasing globalization of food trade, human labour and tourism.These challenges underscore the need to approach One Health at broader scales, beyond individual organisms or populations, as well as intensifying studies on plant health, to effectively address holistically the complex, interconnected risks affecting global health.
从历史上看,健康的概念与人类的福祉的联系比与动物、植物或环境的联系更紧密。相比之下,近几十年来出现的“同一个健康”概念,通常只承认其四个组成部分中的三个相互依存:人类、野生动物和家畜以及环境,但在这一分析中,植物经常被忽视。由于植物健康在“同一个健康”框架内被低估,我们在本次审查中强调其在确保粮食安全和安全方面的重要性,这是人类和动物健康的两个关键问题,正如联合国若干可持续发展目标所强调的那样。粮食生产、销售和消费使用了很大一部分环境自然资源,植物健康技术必须确保这些资源的可持续利用,同时保护环境健康。我们总结了“同一个健康”的四个组成部分之间的关系,重点介绍了人类、动物和植物病原体抗微生物药物耐药性的发展,以及植物病虫害和杂草对植物保护产品的抗性。近几十年来,三个外部驱动因素显著影响植物健康和“同一个健康”:气候变化、外来入侵物种和国际武装冲突。已报道的气候变化对植物健康的主要影响包括有害生物的分布区域、生物学和生命周期的变化以及植物与害虫的相互作用。影响目前植物保健技术可持续性的另一个主要因素是粮食贸易、人力劳动和旅游业日益全球化所导致的影响蔬菜的外来生物的引进和建立。这些挑战突出表明,需要在更广泛的范围内,超越个别生物体或群体,以及加强对植物健康的研究,以有效地全面解决影响全球健康的复杂、相互关联的风险。
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引用次数: 0
Metagenomic surveillance of tick-borne pathogens and microbiomes in Huntingdon County, Pennsylvania 宾夕法尼亚州亨廷顿县蜱传病原体和微生物组的宏基因组监测
IF 4.5 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2025-12-18 DOI: 10.1016/j.onehlt.2025.101305
Andrew Buonaccorsi , Brittney N. McMullen , Brie Builder , Kelliann Drummond , Sarah Halteman , Jeremy Chen See , Evan Thomas , Alexa Viands , Sarah Worley , Justin R. Wright , Jill Keeney , Regina Lamendella
The rise in tick populations across the United States has contributed to a surge in tick-borne diseases, with Pennsylvania ranking among the highest in reported cases. To better understand local pathogen prevalence and microbial community structure, an integrative study of ticks collected from ten recreational trails in Huntingdon County, Pennsylvania during the summer of 2023 was conducted. A total of 96 ticks were sampled, with 33 PCR-positive specimens selected for shotgun metagenomic sequencing. Pathogen screening via qPCR detected Borreliella burgdorferi, Borrelia miyamotoi, Babesia spp., and Anaplasma phagocytophilum. Shotgun metagenomics revealed a broader diversity of tick-borne pathogens, including Rickettsia and Ehrlichia spp., and demonstrated increased sensitivity by detecting low-abundance pathogens in samples that were PCR-negative. Co-infections were common, and multivariate statistical analysis identified significant associations between environmental variables (e.g., humidity, time of day, land cover) and microbial diversity and predicted gene function. Notably, diversity was higher in ticks collected during early afternoon and from northern sites. Co-occurrence network analysis showed Rickettsia as a central taxon with multiple significant positive associations with other microbes while other pathogens were largely absent or peripheral. These findings underscore the enhanced resolution of metagenomic approaches for pathogen detection and the value of combining molecular surveillance with ecological metadata. Our study provides critical insights into local tick microbiomes and pathogen prevalence, which may inform public health interventions and vector management strategies in central Pennsylvania.
美国各地蜱虫数量的增加导致了蜱传疾病的激增,宾夕法尼亚州是报告病例最多的州之一。为了更好地了解当地的病原体流行情况和微生物群落结构,研究人员于2023年夏天在宾夕法尼亚州亨廷顿县的十条休闲小径上收集了蜱虫。共采集96只蜱,其中pcr阳性33只进行鸟枪宏基因组测序。病原qPCR筛选检测到伯氏疏螺旋体、宫本氏疏螺旋体、巴贝斯虫和嗜吞噬细胞无形体。霰弹枪宏基因组学揭示了蜱传病原体的更广泛的多样性,包括立克次体和埃利希氏体,并通过在pcr阴性样本中检测低丰度病原体显示出更高的灵敏度。合并感染很常见,多变量统计分析发现环境变量(如湿度、一天中的时间、土地覆盖)与微生物多样性和预测的基因功能之间存在显著关联。值得注意的是,在下午早些时候和北部地点采集的蜱的多样性较高。共现网络分析显示立克次体是中心分类单元,与其他微生物有多个显著的正相关,而其他病原体基本不存在或处于外围。这些发现强调了宏基因组方法在病原体检测中的分辨率提高,以及分子监测与生态元数据相结合的价值。我们的研究为当地蜱虫微生物群和病原体流行提供了重要的见解,这可能为宾夕法尼亚州中部的公共卫生干预和媒介管理策略提供信息。
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One Health
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