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A critical analysis of the global oases mapping. 全球绿洲制图的批判性分析。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20508
Antonio Santoro, Francesco Piras, Mauro Agnoletti

Oases are receiving particular attention for their capacity to provide different ecosystem services, and as examples of adaptation and resilience in the context of climate change. A 2025 study focusing on the global distribution of oases has been published by Hernández-Agüero et al. (DOI 10.7717/peerj.18884) reporting quantitative and spatial data about the global distribution of oases. An in-depth review of this global oases mapping found significantly inconsistent data with the risk of misinforming the scientific community and other relevant stakeholders about the global distribution of oases. The main critical issues are related to: (i) the oasis definition, (ii) not distinguishing between traditional and modern oases, (iii) methodological inconsistencies in the performed spatial analysis, and inadequate spatial resolution. While most common definitions of oases agree regarding the key role of (traditional) agricultural activities and practices for the oases' origin, shaping, and preservation, the Hernández-Agüero et al. global oases mapping includes among the oases large portions of areas only characterized by natural vegetation of different types in arid areas. In addition, the global oases mapping includes intensive and, in the long term, unsustainable cultivations, and even urban areas. Traditional oases should be considered separately from intensive cultivation systems in arid areas, as only traditional oases are strictly related to high levels of agrobiodiversity, cultural values, traditional ecological knowledge, cultural landscapes, and sustainability. Oases, especially traditional ones, are characterized by different and complex characteristics with local high variability in terms of cultivated varieties, vertical and horizontal structure, and complexity of the landscape mosaic structure. An inaccurate mapping, together with the absence of a differentiation between modern and traditional oases, can lead to a misallocation of conservation resources or to misguided policy strategies. More research and training of automatic classification at a local/national level are needed due to the local/regional pattern variability, while the development of a shared oasis definition is essential for studies related to their mapping and knowledge, as well as for an effective strategy for the protection of these agroecosystems with important ecological and cultural values.

绿洲因其提供不同生态系统服务的能力以及在气候变化背景下适应和恢复能力的例子而受到特别关注。Hernández-Agüero等人于2025年发表了一项关注全球绿洲分布的研究(DOI 10.7717/peerj)。(18884)报告了全球绿洲分布的数量和空间数据。对这一全球绿洲测绘的深入审查发现,数据明显不一致,存在向科学界和其他相关利益攸关方误导绿洲全球分布的风险。主要的关键问题涉及:(1)绿洲的定义;(2)不区分传统绿洲和现代绿洲;(3)空间分析方法不一致,空间分辨率不足。虽然大多数关于绿洲的常见定义都认同(传统)农业活动和实践对绿洲的起源、形成和保存的关键作用,但Hernández-Agüero等人的全球绿洲制图中,绿洲中大部分地区仅以干旱地区不同类型的自然植被为特征。此外,全球绿洲地图还包括集约化和长期不可持续的种植,甚至包括城市地区。应将传统绿洲与干旱地区的集约栽培系统分开考虑,因为只有传统绿洲与农业生物多样性、文化价值、传统生态知识、文化景观和可持续性的高水平严格相关。绿洲,尤其是传统绿洲,在栽培品种、纵横结构、景观镶嵌结构的复杂性等方面具有多样性和复杂性。不准确的地图,加上现代和传统绿洲之间缺乏区分,可能导致保护资源的错误分配或错误的政策策略。由于地方/区域格局的可变性,需要在地方/国家一级进行更多的自动分类研究和培训,而制定一个共同的绿洲定义对于与其制图和知识有关的研究以及对具有重要生态和文化价值的这些农业生态系统的有效保护战略至关重要。
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引用次数: 0
Chronic obstructive pulmonary disease among former United States Department of Energy workers: comorbidities and lung function changes. 前美国能源部工作人员的慢性阻塞性肺病:合并症和肺功能改变。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20696
Sara Howard, Louis Rocconi, Agricola Odoi
<p><strong>Background: </strong>Chronic Obstructive Pulmonary Disease (COPD) is a major cause of morbidity and mortality in the United States and is frequently associated with multiple comorbidities which lead to poor COPD outcomes in the general population. However, little is known regarding COPD comorbidities in occupational cohorts whose exposure experiences could result in differences in comorbidities compared to the general population. These differences may also be important for assessing COPD outcomes such as lung function changes or decline. Therefore, the objectives of this study were to: (1) identify and describe clusters of COPD comorbidities among Department of Energy (DOE) former workers; (2) assess if the attributes of the identified clusters differ from those identified among the general population based on the published literature, and (3) identify predictors of lung function changes and decline among DOE former workers.</p><p><strong>Methods: </strong>Clinical, occupational, and sociodemographic data were obtained from the National Supplemental Screening Program. Imputation for missing values was performed using multiple imputation by chained equation. Comorbidity clusters were identified using hierarchical clustering. Regression and classification random forest models were used to identify predictors of changes in forced expiratory volume in one second (FEV<sub>1</sub>) and FEV<sub>1</sub> decline. Variable importance scores were used to assess the predictive importance of the predictors.</p><p><strong>Results: </strong>A total of 17,448 DOE former workers were included in this study, 20.9% of whom had COPD at their initial exam. Four comorbidity clusters were identified among those with COPD. Cluster 1 was composed of individuals with low prevalence of comorbidities, cluster 2 contained individuals with high prevalence of cardiovascular diseases, cluster 3 had those with high lung cancer prevalence, while cluster 4 had individuals with high prevalence of multiple comorbidities. There was no significant association between the clusters and either FEV<sub>1</sub> change or decline. Age at hire, welding fume exposure, and silica exposure were significant predictors of both FEV<sub>1</sub> changes and decline. Age at initial exam and baseline FEV<sub>1,</sub> which have been identified as significant predictors of these outcomes in the general population, were also significantly associated with the outcomes in the current study. By contrast, smoking, which is a common risk factor in the general population, was a weak predictor of FEV<sub>1</sub> change and decline in this cohort.</p><p><strong>Conclusion: </strong>Clusters of COPD related comorbidities were identified. The most important predictors of lung function changes and decline were FEV<sub>1</sub>, age, age at hire, and sex. The findings suggest that the important predictors of lung function changes and decline in this occupational cohort are different from those reported in
背景:慢性阻塞性肺疾病(COPD)是美国发病率和死亡率的主要原因,并且经常与多种合并症相关,导致普通人群COPD预后不佳。然而,与普通人群相比,暴露经历可能导致COPD合并症差异的职业队列中的COPD合并症知之甚少。这些差异对于评估COPD结果(如肺功能改变或下降)可能也很重要。因此,本研究的目的是:(1)识别和描述能源部(DOE)前工作人员中COPD合并症的集群;(2)根据已发表的文献,评估所识别的集群属性是否与一般人群的属性不同;(3)确定能源部前工人肺功能变化和下降的预测因素。方法:临床、职业和社会人口学数据来自国家补充筛查计划。缺失值的补全采用链式多次补全。共病集群采用分层聚类识别。使用回归和分类随机森林模型来确定一秒钟用力呼气量(FEV1)变化和FEV1下降的预测因子。变量重要性评分用于评估预测因子的预测重要性。结果:共有17,448名DOE前工作人员纳入本研究,其中20.9%的人在初次检查时患有COPD。在COPD患者中发现了四种合并症。聚类1为低患病率合并症个体,聚类2为心血管疾病高患病率个体,聚类3为肺癌高患病率个体,聚类4为多种合并症高患病率个体。集群与FEV1变化或下降之间没有显著关联。雇用年龄、焊接烟尘暴露和二氧化硅暴露是FEV1变化和下降的重要预测因素。在一般人群中,初始检查年龄和基线FEV1已被确定为这些结果的重要预测因子,在当前的研究中也与结果显著相关。相比之下,吸烟是一般人群中常见的危险因素,在该队列中,它是FEV1变化和下降的弱预测因子。结论:确定了COPD相关合并症的集群。肺功能改变和下降最重要的预测因子是FEV1、年龄、入职年龄和性别。研究结果表明,在这一职业队列中,肺功能改变和下降的重要预测因素与在一般人群中报道的不同。研究结果可能有助于指导加强监测工作和控制方案。
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引用次数: 0
Establishing a new methodology for annelid studies: a biometric study of the ragworm Hediste diversicolor (Müller, 1776). 建立环节动物研究的新方法:沙蚕Hediste diversicolor的生物计量学研究(m<s:1> ller, 1776)。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20736
João Almeida, Carlos Antunes, Bruno Spacek Godoy, Dimitri de Araujo Costa

In this study, we propose a new biometric methodology for annelids, based on the number of chaetiger segments as an indicator of growth (independent variable), relating to other structures, such as the number of paragnaths and parapodia, using the commercial species Hediste diversicolor (Müller, 1776) as a model. This species belongs to the family Nereididae, found in estuarine environments along the European Atlantic coast (DOI 10.11646/zootaxa.5696.1.2). This species has several appendages with sensory functions along the body that help the animal navigate in its environment. It also has specialised feeding structures in the peristomium that are essential for taxonomic identification, called paragnaths. The parapodium has distinct chaetal arrangements that distinguish it from other species in the same genus. Due to the importance of economic activities such as fishing and aquaculture, this ragworm is a typical protagonist for studies in multiple areas, with a well-documented life cycle. However, knowledge is lacking on the growth and evolution of individual structures and appendages of the body in this species during its life cycle. Our findings revealed a significant positive correlation between the number of chaetiger segments and most of the morphological structures analysed, evidencing a proportional growth of most of these features, related directly to the chaetigers segments. Simple chaetae, a specific type of chaeta only present in the genus Hediste, were only found in individuals with more than 25 chaetiger segments, possibly indicating a functional change as the worm matures. Simple chaetae tend to be found earlier along the body axis, closer to the median chaetiger as the organism matures. The results illustrate how H. diversicolor develops over time, highlighting the developmental processes and representing the first biometric study of nereidid polychaetes, based on chaetiger count as a proxy for biometric growth, to define new possible life cycle stages, for supporting aquaculture purposes and other research fields.

本研究以商业物种Hediste diversicolor (m ller, 1776)为模型,提出了一种新的环节动物生物识别方法,该方法基于毛囊节数作为生长指标(自变量),与其他结构(如节数和副足数)相关。该物种属于Nereididae科,发现于欧洲大西洋沿岸的河口环境(DOI 10.11646/zootaxa.5696.1.2)。这个物种在身体上有几个具有感觉功能的附属物,帮助动物在环境中导航。它在肠壁周围也有专门的摄食结构,这对分类识别至关重要,称为节。副足有独特的毛状排列,使其区别于同一属的其他物种。由于渔业和水产养殖等经济活动的重要性,这种沙蚕是多个领域研究的典型主角,具有良好的生命周期记录。然而,对该物种在其生命周期中个体结构和身体附属物的生长和进化缺乏了解。我们的研究结果显示,在老虎节段的数量和分析的大多数形态结构之间存在显著的正相关,证明了大多数这些特征的比例增长,直接与老虎节段相关。简单毛纲(一种仅存在于Hediste属的毛纲)仅在具有超过25个毛纲节段的个体中发现,这可能表明随着蠕虫的成熟,毛纲的功能发生了变化。简单的毛纲往往在身体轴线上较早被发现,随着有机体的成熟,更靠近中间的毛纲。结果说明了H. diversicolor是如何随着时间的推移而发展的,突出了发育过程,并代表了第一个基于毛毛藻数量作为生物特征生长代理的毛毛藻生物特征研究,以确定新的可能的生命周期阶段,为水产养殖目的和其他研究领域提供支持。
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引用次数: 0
Hidden-break diversity in pancrustacean rRNA profiles. 环甲壳动物rRNA谱的隐藏断裂多样性。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20693
Aitana Casanova Gómez, Francesc Mesquita-Joanes, Ferran Palero

Background: In the 28S rRNA molecule of many invertebrates, a hidden break splits this large subunit into two noncovalently associated fragments (28Sa and 28Sb), masking 28S in electrophoretic profiles and biasing the standard measurements of RNA quality in extracted tissue samples. Pancrustacean diversity in RNA hidden breaks remains incompletely surveyed, particularly for Oligostraca.

Methods: We sampled 12 species spanning Branchiopoda, Malacostraca, and Oligostraca around Valencia (Spain). RNA was stabilized with DNA/RNA Shield, extracted with Quick-RNA MagBead, and profiled on an Agilent 5200 Fragment Analyzer. Peaks were assigned to 18S and 28S fragments using BLAST-inferred gene lengths from reference genomes and annotated rDNA. We analyzed 28S secondary-structure domains (D-regions) using RNAfold and focusing on D3 and D7a.

Results: Oligostracans and most branchiopods analyzed showed the canonical single-peak profile consistent with 18S, 28Sa, and 28Sb of similar size. Malacostracans exhibited greater profile diversity, including multiple distinct peaks attributable to expansions that alter the relative sizes of 28Sa and b, including expansions near D7a. Comparative analyses indicate conserved D3/D7a architecture across Oligostraca/Branchiopoda and higher variability with frequent expansions in Malacostraca.

Conclusions: Our data extend RNA profile diversity to Oligostraca, refine fragment-size estimates with higher-resolution capillary electrophoresis, and link malacostracan profile heterogeneity to D7a and other expansions. We recommend rRNA-aware quality control for arthropod samples and targeted sequencing of poorly sampled lineages (e.g., Mystacocarida, Cephalocarida, Remipedia) to resolve mechanisms and the phylogenetic distribution of the hidden break.

背景:在许多无脊椎动物的28S rRNA分子中,一个隐藏的断裂将这个大亚基分成两个非共价相关的片段(28Sa和28Sb),在电泳图谱中掩盖28S,并使提取组织样品中RNA质量的标准测量产生偏差。潘甲壳类动物RNA隐藏断裂的多样性尚未完全调查,特别是寡甲壳类。方法:在西班牙瓦伦西亚地区采集了12种甲壳类、甲壳类和寡甲壳类昆虫。RNA用DNA/RNA Shield稳定,用Quick-RNA MagBead提取,在Agilent 5200片段分析仪上分析。利用blast从参考基因组和注释的rDNA中推断的基因长度,将18S和28S片段的峰分配给。利用RNAfold分析28S二级结构域(d -region),重点分析D3和D7a。结果:所分析的少介形虫和大多数枝足类动物均具有与18S、28Sa和28Sb一致的典型单峰谱。Malacostracans表现出更大的剖面多样性,包括多个不同的峰,可归因于改变28Sa和b的相对大小的扩张,包括D7a附近的扩张。对比分析表明,低甲壳目/枝足目D3/D7a结构较为保守,变异性较高,扩展频繁。结论:我们的数据将RNA谱多样性扩展到寡ostraca,通过更高分辨率的毛细管电泳改进片段大小估计,并将malacostracan谱异质性与D7a和其他扩展联系起来。我们建议对节肢动物样本进行rrna意识质量控制,并对采样不足的谱系(如Mystacocarida, Cephalocarida, Remipedia)进行针对性测序,以解决隐藏断裂的机制和系统发育分布。
{"title":"Hidden-break diversity in pancrustacean rRNA profiles.","authors":"Aitana Casanova Gómez, Francesc Mesquita-Joanes, Ferran Palero","doi":"10.7717/peerj.20693","DOIUrl":"10.7717/peerj.20693","url":null,"abstract":"<p><strong>Background: </strong>In the 28S rRNA molecule of many invertebrates, a hidden break splits this large subunit into two noncovalently associated fragments (28Sa and 28Sb), masking 28S in electrophoretic profiles and biasing the standard measurements of RNA quality in extracted tissue samples. Pancrustacean diversity in RNA hidden breaks remains incompletely surveyed, particularly for Oligostraca.</p><p><strong>Methods: </strong>We sampled 12 species spanning Branchiopoda, Malacostraca, and Oligostraca around Valencia (Spain). RNA was stabilized with DNA/RNA Shield, extracted with Quick-RNA MagBead, and profiled on an Agilent 5200 Fragment Analyzer. Peaks were assigned to 18S and 28S fragments using BLAST-inferred gene lengths from reference genomes and annotated rDNA. We analyzed 28S secondary-structure domains (D-regions) using RNAfold and focusing on D3 and D7a.</p><p><strong>Results: </strong>Oligostracans and most branchiopods analyzed showed the canonical single-peak profile consistent with 18S, 28Sa, and 28Sb of similar size. Malacostracans exhibited greater profile diversity, including multiple distinct peaks attributable to expansions that alter the relative sizes of 28Sa and b, including expansions near D7a. Comparative analyses indicate conserved D3/D7a architecture across Oligostraca/Branchiopoda and higher variability with frequent expansions in Malacostraca.</p><p><strong>Conclusions: </strong>Our data extend RNA profile diversity to Oligostraca, refine fragment-size estimates with higher-resolution capillary electrophoresis, and link malacostracan profile heterogeneity to D7a and other expansions. We recommend rRNA-aware quality control for arthropod samples and targeted sequencing of poorly sampled lineages (<i>e.g.</i>, Mystacocarida, Cephalocarida, Remipedia) to resolve mechanisms and the phylogenetic distribution of the hidden break.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20693"},"PeriodicalIF":2.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12880105/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The effects of GLP-1 receptor agonists on metabolic inflammatory markers in patients with type 2 diabetes mellitus: a systematic review and meta-analysis. GLP-1受体激动剂对2型糖尿病患者代谢炎症标志物的影响:系统回顾和荟萃分析
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20710
Fang Zhao, Haoshu Wang, Shenguang Li, Hezhang Yun, Wenbo Su

Objective: This study aimed to evaluate the impact of GLP-1 receptor agonists (GLP-1 RAs) on metabolic inflammatory markers in patients with type 2 diabetes mellitus (T2DM), providing evidence-based insights for their potential application in anti-inflammatory therapy.

Methods: Research questions were developed using the PICOS framework, and the study strictly adhered to PRISMA guidelines. Comprehensive literature searches were conducted across PubMed, EBSCO, Embase, Web of Science, and the Cochrane Library. Data synthesis and subgroup analyses (focusing on GLP-1 RA subtypes, treatment duration, and administration frequency) were performed using RevMan 5.4 software.

Results: Out of 1,347 articles retrieved, 25 studies were ultimately included, comprising a total sample of 1,878 participants (879 in the experimental groups and 999 in the control groups). Quality assessment indicated that most studies exhibited a low risk of bias, with only one study rated as high risk and three studies showing some concerns. Meta-analysis results demonstrated that 18 studies reported a significant reduction in CRP levels in T2DM patients treated with GLP-1 RAs (SMD = -0.39, 95% CI [-0.72 to -0.06], P = 0.02, I2 = 88%). Although the results from 13 studies indicated a decreasing trend in IL-6 levels (SMD = -0.52), this change was not statistically significant (95% CI [-1.34 to 0.29], P = 0.21, I2 = 96%). Additionally, 14 studies showed that GLP-1 RAs significantly reduced TNF-α levels (SMD = -0.51, 95% CI [-0.81 to -0.20], P = 0.001, I2 = 81%). Subgroup analyses revealed that both the type of GLP-1 RA and a longer treatment duration (≥36 weeks) were associated with more pronounced improvements in inflammatory markers.

Conclusion: GLP-1 RAs exhibit a certain degree of anti-inflammatory effect in patients with T2DM, effectively reducing CRP and TNF-α levels. The anti-inflammatory efficacy appears to be influenced by both the type of drug used and the duration of treatment, with more pronounced effects observed for specific drug classes and with longer treatment periods. These findings provide further evidence supporting the use of GLP-1 RAs in the anti-inflammatory management of T2DM.

目的:本研究旨在评估GLP-1受体激动剂(GLP-1 RAs)对2型糖尿病(T2DM)患者代谢炎症标志物的影响,为其在抗炎治疗中的潜在应用提供循证见解。方法:采用PICOS框架制定研究问题,并严格遵守PRISMA指南。在PubMed、EBSCO、Embase、Web of Science和Cochrane图书馆进行了全面的文献检索。采用RevMan 5.4软件进行数据综合和亚组分析(重点关注GLP-1 RA亚型、治疗持续时间和给药频率)。结果:在检索到的1347篇文章中,最终纳入了25项研究,包括1,878名参与者的总样本(实验组879名,对照组999名)。质量评估表明,大多数研究表现出低偏倚风险,只有一项研究被评为高风险,三项研究显示出一些担忧。meta分析结果显示,18项研究报告GLP-1 RAs治疗的T2DM患者CRP水平显著降低(SMD = -0.39, 95% CI [-0.72 ~ -0.06], P = 0.02, I2 = 88%)。虽然13项研究的结果显示IL-6水平有下降趋势(SMD = -0.52),但这种变化没有统计学意义(95% CI [-1.34 ~ 0.29], P = 0.21, I2 = 96%)。此外,14项研究显示GLP-1 RAs显著降低TNF-α水平(SMD = -0.51, 95% CI [-0.81 ~ -0.20], P = 0.001, I2 = 81%)。亚组分析显示,GLP-1 RA的类型和较长的治疗时间(≥36周)与炎症标志物的显著改善相关。结论:GLP-1 RAs在T2DM患者中具有一定的抗炎作用,可有效降低CRP和TNF-α水平。抗炎功效似乎受到所用药物类型和治疗时间的影响,对特定药物类别和较长的治疗时间观察到的效果更为明显。这些发现为GLP-1 RAs在T2DM抗炎治疗中的应用提供了进一步的证据。
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引用次数: 0
Repetitive transcranial magnetic stimulation promotes the recovery of upper limb motor dysfunction in ischemic stroke patients: a DTI-based glymphatic system imaging prospective study. 重复经颅磁刺激促进缺血性脑卒中患者上肢运动功能障碍的恢复:一项基于dti的淋巴系统成像前瞻性研究。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20709
Yulan Dong, Jing Liu, Tianyao Wang, Zhaoxiang Zhang, Xiaoyue Hu, Chengjia Zhu, Meijuan Gao, Ping Yan, Hao Lei, Jun Zhou

Background: Repetitive transcranial magnetic stimulation (rTMS) is an effective tool for motor function recovery in patients with ischemic stroke (IS). Dysfunction of the glymphatic system is implicated in the pathological process of IS. However, it is still unclear whether the recovery of upper limb motor function in IS is affected by rTMS-driven modulation of glymphatic system function. This study aimed to investigate the potential utility of diffusion tensor imaging analysis along the perivascular space (DTI-ALPS) in assessing the impact of rTMS on IS recovery.

Methods: This prospective study recruited IS participants with upper limb motor disorders. A total of 35 participants were randomly assigned to receive either low-frequency rTMS (LF-rTMS) or high-frequency rTMS (HF-rTMS) for two weeks. HF-rTMS was conducted on the infarcted hemisphere M1 and the LF-rTMS was conducted on the non-infarcted hemisphere M1. The information collected from each patient included clinical characteristics, upper limb motor function score, and bilateral hemisphere DTI-ALPS index. Paired t-tests were used to evaluate longitudinal changes of the DTI-ALPS index in LF-rTMS and HF-rTMS groups. The DTI-ALPS index change rates were calculated, and their differences were compared between groups. Spearman's correlation analyses were performed to assess the relationships between DTI-ALPS index changes and changes in upper limb motor function score.

Results: At baseline, no significant differences were observed in the DTI-ALPS index between the HF-rTMS and LF-rTMS groups. After two weeks of rTMS treatment, the DTI-ALPS index of the non-stimulated hemisphere in the HF-rTMS group significantly decreased (t = 2.42, P = 0.028), and the change rate of the DTI-ALPS index was negatively correlated with the recovery of upper limb motor function (r =  - 0.42, P = 0.011). In the LF-rTMS group, longitudinal analysis showed improvement in upper limb motor function scores, but there was no significant change in the DTI-ALPS index.

Conclusion: Both HF-rTMS and LF-rTMS are beneficial for the rehabilitation of upper limb motor function in patients with IS, but the different changes in DTI-ALPS index may indicate differential effects of HF-rTMS and LF-rTMS on the glymphatic system. However, more research is needed to confirm the underlying mechanisms of this interaction.

背景:重复经颅磁刺激(rTMS)是缺血性脑卒中(is)患者运动功能恢复的有效工具。淋巴系统功能障碍与is的病理过程有关。然而,目前尚不清楚is患者上肢运动功能的恢复是否受到rtms驱动的淋巴系统功能调节的影响。本研究旨在探讨沿血管周围空间扩散张量成像分析(DTI-ALPS)在评估rTMS对IS恢复的影响中的潜在效用。方法:这项前瞻性研究招募了上肢运动障碍的IS参与者。共有35名参与者被随机分配接受低频rTMS (LF-rTMS)或高频rTMS (HF-rTMS)两周。在梗死半球M1上进行高频rtms,在非梗死半球M1上进行低频rtms。从每位患者收集的信息包括临床特征、上肢运动功能评分和双侧半球DTI-ALPS指数。采用配对t检验评价LF-rTMS组和HF-rTMS组DTI-ALPS指数的纵向变化。计算DTI-ALPS指数变化率,比较各组间差异。采用Spearman相关分析评估DTI-ALPS指数变化与上肢运动功能评分变化之间的关系。结果:基线时,HF-rTMS组与LF-rTMS组DTI-ALPS指数无显著差异。rTMS治疗2周后,HF-rTMS组非刺激半球DTI-ALPS指数显著降低(t = 2.42, P = 0.028), DTI-ALPS指数变化率与上肢运动功能恢复呈负相关(r = - 0.42, P = 0.011)。在LF-rTMS组中,纵向分析显示上肢运动功能评分有所改善,但DTI-ALPS指数无显著变化。结论:HF-rTMS和LF-rTMS均有利于IS患者上肢运动功能的康复,但DTI-ALPS指数的不同变化可能提示HF-rTMS和LF-rTMS对淋巴系统的影响存在差异。然而,需要更多的研究来证实这种相互作用的潜在机制。
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引用次数: 0
Risk factors for postpartum depression after cesarean section: a systematic review and meta-analysis. 剖宫产术后产后抑郁的危险因素:系统回顾和荟萃分析。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20550
Yali Yu, Hui Feng, Peng Ma

Background: The incidence of cesarean section (CS) is increasing each year and may be associated with an increased risk of postpartum depression (PPD). Although studies have examined the association between cesarean delivery and postpartum depression, the associated risk factors have not been fully investigated. This study aims to identify key risk factors for planned and emergency cesarean delivery through meta-analysis to help develop clinical prevention strategies.

Methods: We searched multiple databases, including CNKI, Wan Fang, VIP, PubMed, Embase, Scopus, Google Scholar, CINAHL, Cochrane Library, and Web of Science, for studies published from the inception of these databases through January 8, 2025. The quality of the studies was assessed using the Newcastle-Ottawa Scale (NOS), and standardized mean difference (SMD) and ratio of ratios (OR) were used to assess the strength of association between different risk factors and postpartum depression, when I2 > 50%, a random effects model was used for data analysis; when I2 < 50%, a fixed effects model was chosen for analysis.

Result: Nine articles (n = 3,338) were included in this study, meta-analysis results suggest that younger women (SMD = -0.16, 95% CI [-0.29 to -0.04], I2 = 0%), higher antenatal depression scores (SMD = 0.28, 95% CI [0.13-0.44], I2 = 15.1%), higher antenatal anxiety scores (SMD = 0.56, 95% CI [0.40-0.72], I2 = 35.6%) are more likely to experience postpartum depression, nulliparous (OR = 1.9, 95% CI [1.39-2.60], I2 = 0%) and elementary education level (OR = 1.34, 95% CI [1.05-1.72], I2 = 44.3%) were risk factor for postpartum depression after caesarean section.

Conclusion: In summary, age, first-time pregnancy status, education level, and antenatal depression and anxiety scores are important risk factors for postpartum depression following cesarean delivery. Identifying and addressing these factors could provide valuable insights for the prevention and management of postpartum depression.

背景:剖宫产(CS)的发生率每年都在增加,并且可能与产后抑郁症(PPD)的风险增加有关。虽然有研究调查了剖宫产和产后抑郁之间的关系,但相关的危险因素尚未得到充分调查。本研究旨在通过荟萃分析确定计划剖宫产和紧急剖宫产的关键危险因素,以帮助制定临床预防策略。方法:我们检索了CNKI、万方、VIP、PubMed、Embase、Scopus、谷歌Scholar、CINAHL、Cochrane Library和Web of Science等多个数据库,检索了从这些数据库建立到2025年1月8日发表的研究。采用纽卡斯尔-渥太华量表(NOS)评价研究质量,采用标准化平均差(SMD)和比值比(OR)评价不同危险因素与产后抑郁的关联强度,当i2bb0 50%时,采用随机效应模型进行数据分析;当I2 < 50%时,选择固定效应模型进行分析。结果:本研究共纳入9篇文章(n = 3338),荟萃分析结果显示,较年轻的妇女(SMD = -0.16, 95% CI [-0.29 ~ -0.04], I2 = 0%)、较高的产前抑郁评分(SMD = 0.28, 95% CI [0.13 ~ 0.44], I2 = 15.1%)、较高的产前焦虑评分(SMD = 0.56, 95% CI [0.40 ~ 0.72], I2 = 35.6%)更容易出现产后抑郁、未产(OR = 1.9, 95% CI [1.39 ~ 2.60], I2 = 0%)和小学教育水平(OR = 1.34, 95% CI[1.05 ~ 1.72])。I2 = 44.3%)为剖宫产术后发生产后抑郁的危险因素。结论:年龄、首次妊娠情况、受教育程度、产前抑郁焦虑评分是剖宫产后产后抑郁的重要危险因素。识别和处理这些因素可以为预防和管理产后抑郁症提供有价值的见解。
{"title":"Risk factors for postpartum depression after cesarean section: a systematic review and meta-analysis.","authors":"Yali Yu, Hui Feng, Peng Ma","doi":"10.7717/peerj.20550","DOIUrl":"10.7717/peerj.20550","url":null,"abstract":"<p><strong>Background: </strong>The incidence of cesarean section (CS) is increasing each year and may be associated with an increased risk of postpartum depression (PPD). Although studies have examined the association between cesarean delivery and postpartum depression, the associated risk factors have not been fully investigated. This study aims to identify key risk factors for planned and emergency cesarean delivery through meta-analysis to help develop clinical prevention strategies.</p><p><strong>Methods: </strong>We searched multiple databases, including CNKI, Wan Fang, VIP, PubMed, Embase, Scopus, Google Scholar, CINAHL, Cochrane Library, and Web of Science, for studies published from the inception of these databases through January 8, 2025. The quality of the studies was assessed using the Newcastle-Ottawa Scale (NOS), and standardized mean difference (SMD) and ratio of ratios (OR) were used to assess the strength of association between different risk factors and postpartum depression, when I<sup>2</sup> > 50%, a random effects model was used for data analysis; when I<sup>2</sup> < 50%, a fixed effects model was chosen for analysis.</p><p><strong>Result: </strong>Nine articles (<i>n</i> = 3,338) were included in this study, meta-analysis results suggest that younger women (SMD = -0.16, 95% CI [-0.29 to -0.04], I<sup>2</sup> = 0%), higher antenatal depression scores (SMD = 0.28, 95% CI [0.13-0.44], I<sup>2</sup> = 15.1%), higher antenatal anxiety scores (SMD = 0.56, 95% CI [0.40-0.72], I<sup>2</sup> = 35.6%) are more likely to experience postpartum depression, nulliparous (OR = 1.9, 95% CI [1.39-2.60], I<sup>2</sup> = 0%) and elementary education level (OR = 1.34, 95% CI [1.05-1.72], I<sup>2</sup> = 44.3%) were risk factor for postpartum depression after caesarean section.</p><p><strong>Conclusion: </strong>In summary, age, first-time pregnancy status, education level, and antenatal depression and anxiety scores are important risk factors for postpartum depression following cesarean delivery. Identifying and addressing these factors could provide valuable insights for the prevention and management of postpartum depression.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20550"},"PeriodicalIF":2.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12880094/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Machine learning-driven PET-CT and clinical pathology model for predicting mediastinal lymph node metastasis in non-small cell lung cancer: a retrospective cohort study. 机器学习驱动的PET-CT和临床病理模型预测非小细胞肺癌纵隔淋巴结转移:一项回顾性队列研究
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20788
Taiyu Bi, Min Qiang, Xiaotian Duan, Yipeng Yin, Wenyu Zhang, Zhe Chen, Xinjun Zhang, Jianzun Ma, Bowei Zhang, Mingbo Tang, Wei Liu

Objective: This study aims to evaluate whether Positron Emission Tomography-Computed Tomography (PET-CT) imaging features of primary tumors and lymph nodes, combined with clinical and pathological data, can accurately predict mediastinal lymph node metastasis (MLNM) in resectable non-small cell lung cancer (NSCLC) using machine learning models.

Methods: A retrospective study was conducted on 390 NSCLC patients who underwent tumor resection and lymph node dissection between January 2017 and December 2023. All patients received 18F-fluorodeoxyglucose (18F-FDG) PET-CT scans within two weeks before surgery. Data from 390 primary tumors and 1,026 lymph node stations were analyzed. Clinical and PET-CT imaging features were extracted, and feature selection was performed using a random forest algorithm. Eight machine learning models were evaluated, including Logistic Regression, classification and regression tree (CART), support vector machine (SVM), gradient boosting decision tree (GBDT), Random Forest, multi-layer perceptron (MLP), extreme gradient boosting tree (XGBoost) and k-nearest neighbor algorithm (KNN).

Three models were developed: Tumor-Pathology-Clinical (TPC), Lymph-Pathology-Clinical (LPC), and Tumor-Lymph-Pathology-Clinical (TLPC). Model performance was assessed using Receiver Operating Characteristic (ROC) curves, Decision Curve Analysis (DCA), and confusion matrices.

Results: The TLPC model, based on the XGBoost algorithm, showed the best performance, with an Area Under the Curve (AUC) of 0.90 (95% CI [0.883-0.957]), specificity of 0.84, and sensitivity of 0.96 (P = 0.0069; significant at P < 0.05). In comparison, the TPC model achieved an AUC of 0.67 (95% CI [0.647-0.703]), specificity of 0.46, and sensitivity of 0.56 (P = 0.7037; not significant). The LPC model showed intermediate performance, with an AUC of 0.78 (95% CI [0.713-0.751]), specificity of 0.73, and sensitivity of 0.84 (P = 0.0269; significant at P < 0.05). All P-values were derived from DeLong's test comparing AUCs between models, with statistical significance defined as P < 0.05. Of the 1,026 lymph node stations analyzed, 204 showed metastasis, while 822 did not. XGBoost consistently outperformed other models in predicting MLNM.

Conclusion: Combining PET-CT imaging features of primary tumors and lymph nodes with clinical and pathological data shows promise for accurately predicting MLNM in NSCLC. The TLPC model offers a non-invasive method for identifying lymph node metastasis, supporting personalized treatment strategies. However, since PET-CT was performed selectively rather than routinely acquired, external validation across diverse clinical settings is warranted to confirm model generalizability.

目的:本研究旨在评估正电子发射断层扫描-计算机断层扫描(PET-CT)原发肿瘤和淋巴结的影像学特征,结合临床和病理资料,是否能利用机器学习模型准确预测可切除的非小细胞肺癌(NSCLC)纵隔淋巴结转移(MLNM)。方法:回顾性研究2017年1月至2023年12月390例接受肿瘤切除和淋巴结清扫的非小细胞肺癌患者。所有患者在手术前两周内接受18f -氟脱氧葡萄糖(18F-FDG) PET-CT扫描。分析了390例原发肿瘤和1026个淋巴结的数据。提取临床和PET-CT影像特征,采用随机森林算法进行特征选择。评估了8种机器学习模型,包括逻辑回归、分类与回归树(CART)、支持向量机(SVM)、梯度增强决策树(GBDT)、随机森林、多层感知器(MLP)、极端梯度增强树(XGBoost)和k近邻算法(KNN)。建立了肿瘤-病理-临床(TPC)、淋巴-病理-临床(LPC)和肿瘤-淋巴-病理-临床(TLPC)三种模型。采用受试者工作特征(ROC)曲线、决策曲线分析(DCA)和混淆矩阵评估模型的性能。结果:基于XGBoost算法的TLPC模型表现最佳,曲线下面积(Area Under The Curve, AUC)为0.90 (95% CI[0.883-0.957]),特异性为0.84,敏感性为0.96 (P = 0.0069, P < 0.05)。相比之下,TPC模型的AUC为0.67 (95% CI[0.647-0.703]),特异性为0.46,敏感性为0.56 (P = 0.7037,无统计学意义)。LPC模型表现为中等水平,AUC为0.78 (95% CI[0.713-0.751]),特异性为0.73,敏感性为0.84 (P = 0.0269, P < 0.05)。所有P值均采用DeLong检验比较模型间auc, P < 0.05为统计学意义。在分析的1026个淋巴结中,204个出现转移,822个没有。XGBoost在预测MLNM方面一直优于其他模型。结论:将原发性肿瘤和淋巴结的PET-CT影像学特征与临床和病理资料相结合,有望准确预测非小细胞肺癌的MLNM。TLPC模型提供了一种非侵入性的方法来识别淋巴结转移,支持个性化治疗策略。然而,由于PET-CT是选择性进行的,而不是常规获得的,因此有必要在不同的临床环境中进行外部验证,以确认模型的普遍性。
{"title":"Machine learning-driven PET-CT and clinical pathology model for predicting mediastinal lymph node metastasis in non-small cell lung cancer: a retrospective cohort study.","authors":"Taiyu Bi, Min Qiang, Xiaotian Duan, Yipeng Yin, Wenyu Zhang, Zhe Chen, Xinjun Zhang, Jianzun Ma, Bowei Zhang, Mingbo Tang, Wei Liu","doi":"10.7717/peerj.20788","DOIUrl":"10.7717/peerj.20788","url":null,"abstract":"<p><strong>Objective: </strong>This study aims to evaluate whether Positron Emission Tomography-Computed Tomography (PET-CT) imaging features of primary tumors and lymph nodes, combined with clinical and pathological data, can accurately predict mediastinal lymph node metastasis (MLNM) in resectable non-small cell lung cancer (NSCLC) using machine learning models.</p><p><strong>Methods: </strong>A retrospective study was conducted on 390 NSCLC patients who underwent tumor resection and lymph node dissection between January 2017 and December 2023. All patients received 18F-fluorodeoxyglucose (18F-FDG) PET-CT scans within two weeks before surgery. Data from 390 primary tumors and 1,026 lymph node stations were analyzed. Clinical and PET-CT imaging features were extracted, and feature selection was performed using a random forest algorithm. Eight machine learning models were evaluated, including Logistic Regression, classification and regression tree (CART), support vector machine (SVM), gradient boosting decision tree (GBDT), Random Forest, multi-layer perceptron (MLP), extreme gradient boosting tree (XGBoost) and k-nearest neighbor algorithm (KNN).</p><p><strong>Three models were developed: </strong>Tumor-Pathology-Clinical (TPC), Lymph-Pathology-Clinical (LPC), and Tumor-Lymph-Pathology-Clinical (TLPC). Model performance was assessed using Receiver Operating Characteristic (ROC) curves, Decision Curve Analysis (DCA), and confusion matrices.</p><p><strong>Results: </strong>The TLPC model, based on the XGBoost algorithm, showed the best performance, with an Area Under the Curve (AUC) of 0.90 (95% CI [0.883-0.957]), specificity of 0.84, and sensitivity of 0.96 (<i>P</i> = 0.0069; significant at <i>P</i> < 0.05). In comparison, the TPC model achieved an AUC of 0.67 (95% CI [0.647-0.703]), specificity of 0.46, and sensitivity of 0.56 (<i>P</i> = 0.7037; not significant). The LPC model showed intermediate performance, with an AUC of 0.78 (95% CI [0.713-0.751]), specificity of 0.73, and sensitivity of 0.84 (<i>P</i> = 0.0269; significant at <i>P</i> < 0.05). All <i>P</i>-values were derived from DeLong's test comparing AUCs between models, with statistical significance defined as <i>P</i> < 0.05. Of the 1,026 lymph node stations analyzed, 204 showed metastasis, while 822 did not. XGBoost consistently outperformed other models in predicting MLNM.</p><p><strong>Conclusion: </strong>Combining PET-CT imaging features of primary tumors and lymph nodes with clinical and pathological data shows promise for accurately predicting MLNM in NSCLC. The TLPC model offers a non-invasive method for identifying lymph node metastasis, supporting personalized treatment strategies. However, since PET-CT was performed selectively rather than routinely acquired, external validation across diverse clinical settings is warranted to confirm model generalizability.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20788"},"PeriodicalIF":2.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12880095/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143100","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the mediating role of physical activity levels in the relationship between physical literacy and physical fitness in Chinese university students. 探讨体育活动水平在大学生身体素养与体质关系中的中介作用。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20689
Yingshuang Sun, Donglin Hu

Objective: This study investigated the relationships between physical literacy (PL), physical activity levels (PALs), and physical fitness among Chinese university students, with a particular focus on the mediating role of PALs and the consistency of findings across various analytical methods.

Methods: Participants included 115 first-year students (79 males, 36 females) from Nanjing, China. PL was assessed using the Perceived Physical Literacy Instrument (PPLI-SC), PALs were measured using the Physical Activity Questionnaire for Adolescents (PAQ-A), and physical fitness was assessed through four indicators: body mass index (BMI), 50-m sprint, sit-and-reach, and 800/1,000-m run. Descriptive statistics, correlation, and regression analyses were conducted in SPSS 26.0. Mediation was tested using the PROCESS macro (Model 4, 5,000 bootstrap samples), and structural equation modeling (SEM) was applied using AMOS 26.0 for validation.

Results: Males outperformed females in the 50-m sprint, while females exhibited superior flexibility and cardiorespiratory endurance; BMI was significantly higher in males (p < 0.01). PL was positively correlated with PALs (r = 0.584, p < 0.01), and both were significantly associated with all fitness indicators except BMI. Mediation analyses indicated that PALs fully mediated the associations between PL and sprint performance, flexibility, and cardiorespiratory endurance. For BMI, the PROCESS macro suggested a weak indirect effect, whereas SEM results were nonsignificant, highlighting the sensitivity of the results to the analytical method used.

Conclusion: PL is strongly linked to physical fitness in Chinese university students, with PALs acting as a critical mediator. The inconsistent BMI findings underscore its complex determinants, which extend beyond physical activity. Promoting PL and PALs through university physical education programs may improve fitness outcomes. Future research should validate these findings using larger samples, longitudinal designs, and broader body composition indicators (e.g., body fat percentage, muscle mass).

目的:本研究探讨了中国大学生身体素养(physical literacy, PL)、身体活动水平(physical activity level, PALs)和身体健康之间的关系,特别关注了pal的中介作用以及不同分析方法结果的一致性。方法:研究对象为来自中国南京的115名一年级学生(男79人,女36人)。使用感知身体素养量表(PPLI-SC)评估身体素养,使用青少年身体活动问卷(PAQ-A)测量身体素养,通过身体质量指数(BMI)、50米冲刺、坐伸和800/ 1000米跑步四个指标评估身体素质。在SPSS 26.0中进行描述性统计、相关分析和回归分析。使用PROCESS宏(模型4,5,000个bootstrap样本)对中介进行检验,并使用AMOS 26.0应用结构方程模型(SEM)进行验证。结果:男性在50米短跑中表现优于女性,女性表现出更强的柔韧性和心肺耐力;结论:中国大学生的生理质量与体质有密切关系,而pal在其中起着重要的中介作用。不一致的BMI结果强调了其复杂的决定因素,而不仅仅是体育活动。通过大学体育课程推广PL和pal可以改善健身效果。未来的研究应该使用更大的样本、纵向设计和更广泛的身体组成指标(如体脂百分比、肌肉质量)来验证这些发现。
{"title":"Exploring the mediating role of physical activity levels in the relationship between physical literacy and physical fitness in Chinese university students.","authors":"Yingshuang Sun, Donglin Hu","doi":"10.7717/peerj.20689","DOIUrl":"10.7717/peerj.20689","url":null,"abstract":"<p><strong>Objective: </strong>This study investigated the relationships between physical literacy (PL), physical activity levels (PALs), and physical fitness among Chinese university students, with a particular focus on the mediating role of PALs and the consistency of findings across various analytical methods.</p><p><strong>Methods: </strong>Participants included 115 first-year students (79 males, 36 females) from Nanjing, China. PL was assessed using the Perceived Physical Literacy Instrument (PPLI-SC), PALs were measured using the Physical Activity Questionnaire for Adolescents (PAQ-A), and physical fitness was assessed through four indicators: body mass index (BMI), 50-m sprint, sit-and-reach, and 800/1,000-m run. Descriptive statistics, correlation, and regression analyses were conducted in SPSS 26.0. Mediation was tested using the PROCESS macro (Model 4, 5,000 bootstrap samples), and structural equation modeling (SEM) was applied using AMOS 26.0 for validation.</p><p><strong>Results: </strong>Males outperformed females in the 50-m sprint, while females exhibited superior flexibility and cardiorespiratory endurance; BMI was significantly higher in males (<i>p</i> < 0.01). PL was positively correlated with PALs (<i>r</i> = 0.584, <i>p</i> < 0.01), and both were significantly associated with all fitness indicators except BMI. Mediation analyses indicated that PALs fully mediated the associations between PL and sprint performance, flexibility, and cardiorespiratory endurance. For BMI, the PROCESS macro suggested a weak indirect effect, whereas SEM results were nonsignificant, highlighting the sensitivity of the results to the analytical method used.</p><p><strong>Conclusion: </strong>PL is strongly linked to physical fitness in Chinese university students, with PALs acting as a critical mediator. The inconsistent BMI findings underscore its complex determinants, which extend beyond physical activity. Promoting PL and PALs through university physical education programs may improve fitness outcomes. Future research should validate these findings using larger samples, longitudinal designs, and broader body composition indicators (<i>e.g.</i>, body fat percentage, muscle mass).</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20689"},"PeriodicalIF":2.4,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12880097/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nano-scale silicon intervention for improving abiotic stress resilience in rice: mechanistic insights and practical applications. 纳米硅干预提高水稻非生物抗逆性:机理见解和实际应用。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-02-03 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20599
Song Youliang, Sher Muhammad, Hu Ying, Wang Lei, Hua Zhimeng, Zhou Xingyuan, Zhao Pengke, Li Fangzhen, Xie Lu, Ali Aslam

Rice, a global food staple, primary food source for half of the world's population, is highly vulnerable to abiotic stresses such as drought, salinity, heat, and heavy metal toxicity. Silicon nanoparticles (SiNPs) have emerged as promising nano-interventions to enhance stress resilience by improving antioxidant defenses, photosynthesis, and ion homeostasis. Recent studies demonstrate that SiNPs modulate the expression of key transporter genes (OsHMA3, OsLsi1, OsABCC1) and activate transcription factors (DREB, NAC, WRKY) that regulate stress tolerance pathways. They also promote the accumulation of compatible solutes and phenolic compounds, reducing oxidative damage and metal toxicity. Omics-based research reveals that SiNPs influence redox signaling, hormonal balance, and epigenetic regulation, providing a clear understanding of their protective mechanisms at the physiological level. These effects are linked to enhanced structural integrity, reactive oxygen species (ROS) scavenging, and better nutrient uptake. However, rice-specific datasets remain limited, and field-scale validations are still scarce. SiNPs show strong potential as smart nanocarriers for nutrient delivery and gene modulation, integrating effectively with precision and sustainable agriculture practices. However, uncertainties regarding dosage, soil persistence, and food safety require careful evaluation before large-scale use. This review synthesizes physiological, molecular, and omics-based insights into SiNP-mediated abiotic stress tolerance in rice, emphasizing advances in understanding underlying resilience mechanisms. It also highlights environmental and regulatory challenges, identifies critical research gaps, and proposes future directions for safe and scalable applications of SiNPs in rice systems.

水稻是一种全球主食,是世界一半人口的主要食物来源,它极易受到干旱、盐度、高温和重金属毒性等非生物胁迫的影响。硅纳米颗粒(SiNPs)已成为一种有前途的纳米干预手段,通过改善抗氧化防御、光合作用和离子稳态来增强应激恢复能力。最近的研究表明,SiNPs可以调节关键转运基因(OsHMA3、OsLsi1、OsABCC1)的表达,并激活调控胁迫耐受途径的转录因子(DREB、NAC、WRKY)。它们还促进相容溶质和酚类化合物的积累,减少氧化损伤和金属毒性。基于组学的研究表明,SiNPs影响氧化还原信号、激素平衡和表观遗传调控,为其生理水平的保护机制提供了清晰的认识。这些作用与增强的结构完整性,活性氧(ROS)清除和更好的营养吸收有关。然而,特定水稻的数据集仍然有限,田间规模的验证仍然很少。sinp显示出作为营养传递和基因调控的智能纳米载体的强大潜力,与精准和可持续的农业实践有效结合。然而,用量、土壤持久性和食品安全方面的不确定性需要在大规模使用前进行仔细评估。本文综述了基于sinp介导的水稻非生物抗逆性的生理、分子和组学研究,强调了在理解潜在抗逆性机制方面的进展。它还强调了环境和监管方面的挑战,确定了关键的研究空白,并提出了sinp在水稻系统中安全和可扩展应用的未来方向。
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