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Mini-review: red seaweed Hydropuntia edulis and agar derivatives for food, medicinal and agriculture applications. 小综述:红海藻和琼脂衍生物的食品,医药和农业应用。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-30 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20393
Tracy Saptu, Kaiser Mahmood, Wan-Teng Leong, Mohd Fakhrulddin Ismail, Irina Harun, Uthumporn Utra, Shahrul Razid Sarbini, Ahmad Hussaini, Muta Harah Zakaria, Yus Aniza Yusof, Shiamala Devi Ramaiya, Hanisah Kamilah

The red seaweed Hydropuntia edulis is found in Southeast Asia in the Indian and Pacific Oceans. Due to ease of cultivation and a greater concentration of sulfated polysaccharides, H. edulis is a superior source for agar production compared to other species. However, the pretreatments and extraction conditions strongly impact agar's final gel strength and yield. Agar is made up of agarose, which is approximately 70%, and agaropectin, 30%, and has found a wide range of applications as a thickening, gelling, and stabilizing agent. This review highlighted agar extraction, its application in food as an ingredient, coating, and packaging. In-depth discussions about the interaction of agar with non-agar biopolymers have been made to diversify its utility in different avenues. Additionally, by considering the richness of bioactive derivatives of H. edulis, the applications in pharmaceuticals, agriculture, and aquaculture have been elaborated, followed by some limitations. Detailed investigation of H. edulis review aims to encourage increased cultivation of the species for producing agar and other bioactive compounds that support sustainable food, pharmaceutical, agriculture, and aquaculture industries.

红海藻产于东南亚的印度洋和太平洋。由于易于培养和更高浓度的硫酸多糖,与其他物种相比,毛竹属植物是琼脂生产的优越来源。然而,预处理和提取条件强烈影响琼脂的最终凝胶强度和产率。琼脂由琼脂糖(约占70%)和琼脂胶(约占30%)组成,作为增稠剂、胶凝剂和稳定剂有着广泛的应用。本文综述了琼脂提取及其在食品配料、涂料、包装等方面的应用。深入讨论了琼脂与非琼脂生物聚合物的相互作用,以多样化其在不同途径的用途。此外,考虑到毛竹的生物活性衍生物的丰富性,阐述了毛竹在制药、农业和水产养殖方面的应用,并指出了一些局限性。详细调查的目的是为了鼓励增加该物种的培养,以生产琼脂和其他生物活性化合物,支持可持续的食品,制药,农业和水产养殖业。
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引用次数: 0
Preparing for an AI-driven future: insights from Saudi pharmacy students. 为人工智能驱动的未来做准备:来自沙特药学学生的见解。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-30 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20600
Dalia Almaghaslah, Arwa Khaled, Shadma Wahab, Geetha Kandasamy

Aim: The current study was conducted to assess pharmacy students outlook towards artificial intelligence (AI), pharmacy education, and pharmacy practice.

Methods: The study used a cross-sectional, self-administered, anonymous online questionnaire. The study was conducted at the college of pharmacy in Saudi Arabia.

Participants: Year 4 and year 5 undergraduate pharmacy students were chosen as the study population.

Results: A total of 133 pharmacy students completed the survey (response rate: 82%). The mean Likert score for perceptions of AI use in pharmacy education and practice was 3.43 ± 0.6, while the mean score for incorporation of AI in pharmacy education programs was 3.55 ± 0.78. Students demonstrated generally positive attitudes toward AI, supporting its development and integration into pharmacy curricula, though ethical awareness remained moderate.

Discussion and conclusion: Most students were supportive of the development of AI in the pharmacy field and valued the importance of having some basic understanding of AI. Ethical and legal consideration of AI used was raised by participants. They were supportive of integrating AI into pharmacy program curricula. Their top-rated learning objectives involved understanding and interpreting AI generated results, gaining awareness of ethical consideration of using AI in clinical practice, comprehend how basic technology process the work, expressing how technology functions in a way that others can grasp.

目的:本研究旨在评估药学学生对人工智能(AI)、药学教育和药学实践的看法。方法:本研究采用横断面、自我管理、匿名在线问卷。这项研究在沙特阿拉伯的药学院进行。研究对象:选择四年级和五年级的药学本科生作为研究人群。结果:共有133名药学专业学生完成调查,回复率为82%。在药学教育和实践中使用人工智能的平均李克特得分为3.43±0.6,而在药学教育项目中纳入人工智能的平均李克特得分为3.55±0.78。学生普遍对人工智能持积极态度,支持其发展并将其纳入药学课程,但道德意识仍然适度。讨论与结论:大多数学生支持人工智能在药学领域的发展,并重视对人工智能有一些基本了解的重要性。与会者提出了对人工智能使用的伦理和法律考虑。他们支持将人工智能整合到药学课程中。他们最重要的学习目标包括理解和解释人工智能产生的结果,获得在临床实践中使用人工智能的伦理考虑意识,理解基本技术如何处理工作,以其他人可以掌握的方式表达技术如何运作。
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引用次数: 0
Genome-wide identification of SMALL AUXIN UP RNA (SAUR) gene family and its expression profiles in response to abiotic stress and auxin in tea plants (Camellia sinensis). 茶树生长素SMALL AUXIN UP RNA (SAUR)基因家族的全基因组鉴定及其对非生物胁迫和生长素的表达谱
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-30 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20681
Yan Wang, Fan Ye, Jialing Nie, Yuanyuan Wu, Mengxin Zhou, Kun Wang, Kuanru Hu, Guofeng Liu

Tea plant (Camellia sinensis (L.) O. Kuntze) is particularly vulnerable to abiotic stresses, with impacts on its growth and the production of bioactive compounds. SMALL AUXIN UP RNA (SAUR) genes, the largest family of early auxin-responsive genes, regulate plant growth and abiotic stress responses. However, their roles in tea plant remain unknown. In this study, we conducted a comprehensive genome-wide analysis of CsSAURs, including phylogenetic relationships, gene structure, chromosomal distribution, duplication events, motif composition, cis-elements, and gene ontology (GO) annotations. Expression profiles were examined using transcriptome data and validated by qRT-PCR. A total of 97 CsSAURs were identified and classified into eight phylogenetic groups, with 90 mapped to 15 chromosomes and seven to contigs. Genes within the same group exhibit conserved gene structures and motif compositions. Segmental duplication predominantly contributes to family expansion. The predominant CsSAUR expression was found in flowers, with their promoters containing auxin-responsive, phytohormone, and stress-related cis-elements. A limited number of CsSAURs exhibit responsiveness to cold, drought, salinity, and methyl jasmonate (MeJA). Notably, CsSAUR10, 16, and 73 exhibited significant upregulation under abiotic stress and auxin treatment. Overall, this study characterizes the SAUR family in tea plant and highlights its potential roles in the regulation of growth and stress responses. The identified auxin and stress-responsive CsSAURs represent potential targets for genetic improvement of tea plants.

茶树(Camellia sinensis, L.)O. Kuntze)特别容易受到非生物胁迫的影响,影响其生长和生物活性化合物的产生。生长素UP RNA (SAUR)基因是生长素早期应答基因中最大的家族,调控植物生长和非生物胁迫应答。然而,它们在茶树中的作用尚不清楚。在这项研究中,我们对CsSAURs进行了全面的全基因组分析,包括系统发育关系、基因结构、染色体分布、重复事件、基序组成、顺式元件和基因本体(GO)注释。使用转录组数据检测表达谱,并通过qRT-PCR验证。共鉴定出97只cssaur,并将其划分为8个系统发育类群,其中90个与15条染色体相关,7个与contigs相关。同一群体内的基因表现出保守的基因结构和基序组成。片段复制主要有助于家庭扩张。CsSAUR主要在花中表达,其启动子含有生长素响应、植物激素和与胁迫相关的顺式元件。有限数量的CsSAURs表现出对寒冷、干旱、盐度和茉莉酸甲酯(MeJA)的反应性。值得注意的是,CsSAUR10、16和73在非生物胁迫和生长素处理下表现出显著的上调。总的来说,本研究描述了茶树SAUR家族的特征,并强调了其在调节生长和逆境反应中的潜在作用。所鉴定的生长素和应激响应型CsSAURs是茶树遗传改良的潜在靶点。
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引用次数: 0
Do ureteral stents improve clinical outcomes in renal transplantation? A systematic review and meta-analysis comparing stented and non-stented anastomosis techniques. 输尿管支架能改善肾移植的临床结果吗?比较支架和非支架吻合技术的系统综述和荟萃分析。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20665
Shengnan Yin, Xiaodong Hao, Xiaoping Cai, Xiaowei Wang, Chenyang Zhao, Yaxiong Li, Shuo Zheng

Background: Urological complications following renal transplantation (RT) remain a significant clinical challenge. The role of ureteral stents in mitigating these complications is a subject of ongoing debate. This study aimed to assess whether ureteral stents improve clinical outcomes in RT, comparing stented and non-stented anastomosis techniques.

Methods: An extensive search was conducted in PubMed, Embase, Cochrane Central Register of Controlled Trials, and the Chinese Biomedical Literature Service System from inception to November 26, 2025, following the PRISMA and AMSTAR standards. This study was registered with PROSPERO (CRD42024557423). The primary outcomes were urological mechanical complications (UMCs) and urinary tract infections (UTIs), whereas the secondary outcomes included hematuria, graft rejection, renal function, cost-effectiveness, stent-related complications, and quality of life (QOL). The Mantel-Haenszel test was used to calculate pooled risk ratios (RRs) and 95% confidence intervals (CIs) for the outcomes.

Results: Sixteen RCTs involving 2,486 patients met the inclusion criteria. Meta-analysis revealed that the stent group had a significantly lower incidence of urine leakage (RR = 0.25, 95% CI [0.13-0.47]) and ureteral obstruction or stricture (RR = 0.42, 95% CI [0.25-0.71]) compared to the non-stent group. However, the incidence of UTIs was higher in the stent group (RR = 1.41, 95% CI [1.08-1.84]). No significant differences were observed in hematuria, graft rejection, or renal function between groups.

Conclusions: Routine ureteral stent placement in RT significantly reduces the incidence of UMCs despite potentially increasing the risk of UTIs. This balance between benefits and risks supports the continued use of ureteral stents in RT, pending further high-quality studies.

背景:肾移植(RT)后泌尿系统并发症仍然是一个重大的临床挑战。输尿管支架在减轻这些并发症中的作用是一个持续争论的主题。本研究旨在通过比较输尿管支架和非支架吻合技术,评估输尿管支架是否能改善RT的临床结果。方法:采用PRISMA和AMSTAR标准,在PubMed、Embase、Cochrane中央对照试验注册库和中国生物医学文献服务系统(Chinese Biomedical Literature Service System)中广泛检索自成立至2025年11月26日的文献。本研究已在PROSPERO注册(CRD42024557423)。主要结局是泌尿系统机械并发症(UMCs)和尿路感染(uti),而次要结局包括血尿、移植排斥反应、肾功能、成本效益、支架相关并发症和生活质量(QOL)。使用Mantel-Haenszel检验计算结果的合并风险比(rr)和95%置信区间(ci)。结果:16项rct共2486例患者符合纳入标准。meta分析显示,与非支架组相比,支架组尿漏发生率(RR = 0.25, 95% CI[0.13-0.47])和输尿管梗阻或狭窄发生率(RR = 0.42, 95% CI[0.25-0.71])显著降低。然而,支架组尿路感染的发生率较高(RR = 1.41, 95% CI[1.08-1.84])。两组间在血尿、移植物排斥反应或肾功能方面均无显著差异。结论:常规输尿管支架置入术可显著降低肿瘤发生率,尽管可能增加uti的风险。这种获益和风险之间的平衡支持输尿管支架在RT中继续使用,有待进一步的高质量研究。
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引用次数: 0
Exploring new rehabilitation pathways for stroke based on the comorbidity of post-stroke hypoesthesia with anxiety and depression. 基于卒中后感觉减退伴焦虑和抑郁的合并症探索卒中康复新途径。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20679
Yuyan Chen, Yusheng Zhao, Bangqi Wu, Yupei Cheng, Jingjie Huang, Chaoran Wang, Jing Bai, Yuxing Zhang

Background: Post-stroke hypoesthesia is a common yet often overlooked sequela, involving diminished capacities in touch, temperature, and pain perception. Recent studies suggest that sensory deficits not only hinder functional recovery but also show a high rate of comorbidity with anxiety and depression.

Objective: This study aims to systematically integrate the neural mechanisms, perceptual processing features, and behavioral consequences of post-stroke hypoesthesia and emotional disorders, to explore their comorbid relationship and propose more targeted rehabilitation strategies based on these mechanisms.

Methods: This review conducts an interdisciplinary literature search, integrating research from neuroimaging, cognitive neuroscience, and rehabilitation medicine, including 73 relevant studies. The keywords used in the screening are "Hypesthesia," "Impaired Sensation," "Anxiety," and "Depression," covering studies on sensory impairments and mood disorders. By comparing the sensory-emotion interaction mechanisms in stroke and non-stroke populations, a bidirectional model is constructed.

Results: Findings indicate that post-stroke hypoesthesia results not only from structural damage in regions such as the thalamus, insula, and prefrontal cortex, but also from functional disruptions in perceptual processing. These impairments contribute to a closed-loop mechanism involving neural dysconnectivity and predictive coding dysfunction, which facilitates the emergence of anxiety and depression. In turn, these emotional disorders further suppress sensory recovery, significantly reducing patients' motivation and rehabilitation compliance.

Conclusion: Post-stroke hypoesthesia should be recognized as a critical etiological and maintaining factor in anxiety and depression. The coexistence of pathological and functional mechanisms underscores the need for rehabilitation strategies that transcend the boundaries of perception, emotion, and cognition. Developing a rehabilitation pathway centered on "sensory-emotional co-regulation" can facilitate early identification, subtype-specific intervention, and comprehensive support for emotional comorbidities following stroke.

背景:卒中后感觉减退是一种常见但常被忽视的后遗症,包括触觉、体温和痛觉能力下降。最近的研究表明,感觉缺陷不仅阻碍功能恢复,而且与焦虑和抑郁并存的比例很高。目的:本研究旨在系统整合脑卒中后感觉减退和情绪障碍的神经机制、知觉加工特征和行为后果,探讨它们之间的共病关系,并基于这些机制提出更有针对性的康复策略。方法:采用交叉学科的文献检索方法,整合神经影像学、认知神经科学、康复医学等领域的相关研究,包括73项相关研究。筛选中使用的关键词是“感觉亢进”、“感觉受损”、“焦虑”和“抑郁”,涵盖了感觉障碍和情绪障碍的研究。通过比较脑卒中人群和非脑卒中人群的感觉-情绪相互作用机制,构建了一个双向模型。结果:研究结果表明,脑卒中后感觉减退不仅是由于丘脑、脑岛和前额叶皮质等区域的结构损伤,而且是由于感知处理的功能中断。这些损伤促成了一个涉及神经连接障碍和预测性编码功能障碍的闭环机制,从而促进了焦虑和抑郁的出现。反过来,这些情绪障碍进一步抑制感觉恢复,显著降低患者的动机和康复依从性。结论:脑卒中后感觉减退应被视为焦虑和抑郁的重要病因和维持因素。病理和功能机制的共存强调了超越感知、情感和认知界限的康复策略的必要性。建立以“感觉-情绪共调节”为中心的康复途径,有助于卒中后情绪合并症的早期识别、亚型特异性干预和综合支持。
{"title":"Exploring new rehabilitation pathways for stroke based on the comorbidity of post-stroke hypoesthesia with anxiety and depression.","authors":"Yuyan Chen, Yusheng Zhao, Bangqi Wu, Yupei Cheng, Jingjie Huang, Chaoran Wang, Jing Bai, Yuxing Zhang","doi":"10.7717/peerj.20679","DOIUrl":"10.7717/peerj.20679","url":null,"abstract":"<p><strong>Background: </strong>Post-stroke hypoesthesia is a common yet often overlooked sequela, involving diminished capacities in touch, temperature, and pain perception. Recent studies suggest that sensory deficits not only hinder functional recovery but also show a high rate of comorbidity with anxiety and depression.</p><p><strong>Objective: </strong>This study aims to systematically integrate the neural mechanisms, perceptual processing features, and behavioral consequences of post-stroke hypoesthesia and emotional disorders, to explore their comorbid relationship and propose more targeted rehabilitation strategies based on these mechanisms.</p><p><strong>Methods: </strong>This review conducts an interdisciplinary literature search, integrating research from neuroimaging, cognitive neuroscience, and rehabilitation medicine, including 73 relevant studies. The keywords used in the screening are \"Hypesthesia,\" \"Impaired Sensation,\" \"Anxiety,\" and \"Depression,\" covering studies on sensory impairments and mood disorders. By comparing the sensory-emotion interaction mechanisms in stroke and non-stroke populations, a bidirectional model is constructed.</p><p><strong>Results: </strong>Findings indicate that post-stroke hypoesthesia results not only from structural damage in regions such as the thalamus, insula, and prefrontal cortex, but also from functional disruptions in perceptual processing. These impairments contribute to a closed-loop mechanism involving neural dysconnectivity and predictive coding dysfunction, which facilitates the emergence of anxiety and depression. In turn, these emotional disorders further suppress sensory recovery, significantly reducing patients' motivation and rehabilitation compliance.</p><p><strong>Conclusion: </strong>Post-stroke hypoesthesia should be recognized as a critical etiological and maintaining factor in anxiety and depression. The coexistence of pathological and functional mechanisms underscores the need for rehabilitation strategies that transcend the boundaries of perception, emotion, and cognition. Developing a rehabilitation pathway centered on \"sensory-emotional co-regulation\" can facilitate early identification, subtype-specific intervention, and comprehensive support for emotional comorbidities following stroke.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20679"},"PeriodicalIF":2.4,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12861131/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146106618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Thiamin addition to soil increases potato tuber thiamin content under greenhouse conditions. 在温室条件下,土壤中添加硫胺素可提高马铃薯块茎硫胺素含量。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20684
Aymeric Goyer, Ravi Phillips, Aidan Seidel, David Handy, Jeffrey C Anderson, Andrea Schiffer, Alexandra J Weisberg, Paul C Bethke

Thiamin is essential for human health, but humans do not synthesize it and must consume it through regular dietary intake. Plants synthesize thiamin in photosynthetic tissues to support various primary metabolic pathways. In addition, plants can also absorb thiamin from the soil. Interestingly, plant growth can be improved by supplying exogenous thiamin, but this effect has not been investigated in potato (Solanum tuberosum). Here, we report the effect of soil thiamin amendment on yield and tissue thiamin content of three potato varieties grown in a greenhouse. We watered plants with different concentrations of thiamin on a weekly basis from emergence until harvest. Under optimal growth conditions, thiamin supplementation did not affect tuber yield, regardless of soil type. Thiamin accumulated up to 58, six and three times in roots, tubers and stems, respectively, of plants grown in soil supplemented with thiamin compared to control plants, while leaf thiamin content did not significantly change. Quantitative polymerase chain reaction analysis showed that soil thiamin supplementation had no or little effect on the expression of two key thiamin biosynthesis genes in leaves. Our results indicate that increasing soil thiamin concentration does not improve potato yield under optimal growth conditions at the greenhouse scale. However, increased yield at field-scale under stress conditions remains to be tested. Intriguingly, the accumulation of thiamin in potato tubers suggests that soil thiamin supplementation may be a viable strategy for biofortification.

硫胺素对人体健康至关重要,但人类不能合成硫胺素,必须通过常规饮食摄入。植物在光合组织中合成硫胺素,支持各种初级代谢途径。此外,植物还可以从土壤中吸收维生素。有趣的是,提供外源硫胺素可以改善植物生长,但尚未对马铃薯(Solanum tuberosum)进行过研究。本文报道了土壤硫胺素改良剂对3个温室马铃薯品种产量和组织硫胺素含量的影响。我们每周用不同浓度的硫胺素浇灌植物,从萌芽到收获。在最佳生长条件下,无论土壤类型如何,补充硫胺素都不会影响块茎产量。在添加了硫胺素的土壤中生长的植株的根、块茎和茎中硫胺素的含量分别是对照植株的58倍、6倍和3倍,而叶片中硫胺素的含量变化不显著。定量聚合酶链反应分析表明,添加土壤硫胺素对叶片中两个关键硫胺素生物合成基因的表达没有或影响很小。结果表明,在温室条件下,增加土壤硫胺素浓度并不能提高马铃薯产量。然而,在压力条件下的田间增产仍有待检验。有趣的是,马铃薯块茎中硫胺素的积累表明,土壤补充硫胺素可能是一种可行的生物强化策略。
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引用次数: 0
Rheumatoid arthritis and stroke risk: a systematic review and meta-analysis. 类风湿关节炎和中风风险:系统回顾和荟萃分析。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20568
Lulu Yang, Xinyu Liu, Guangyuan Yang, Hongmei Wu, Xingsen Li, Jinyu Xuan, Shuxin Dong

Objectives: This meta-analysis aims to evaluate the association between rheumatoid arthritis (RA) and stroke risk. Methods: PubMed, Cochrane Library, and Embase were searched for observational studies published from database inception to October 7, 2025, using medical subject headings (MeSH) and keywords. Random effect models were used to calculate odds ratios (OR) and 95% confidence intervals (CI) for evaluating the associations between RA and stroke risk. All statistical analyses were performed using Stata statistical software version 17.0. The funnel plot, Egger's test and Begg's test were used to evaluate publication bias.

Results: This meta-analysis included 12 observational studies with a total of 1,715,001 participants, published between 2003 and 2025. The pooled analysis revealed a significant association between RA and increased stroke risk (OR = 1.35; 95% CI [1.26-1.45]; P = 0.000). Subgroup analysis showed that women with RA had a slightly higher stroke risk than men (OR = 1.60; 95% CI [1.19-2.16]; P = 0.002). Additionally, RA patients aged over 65 were at higher risk of stroke (OR = 1.24; 95% CI [1.02-1.50]; P = 0.032). No significant publication bias was detected, and sensitivity analyses confirmed the robustness of our findings.

Conclusions: This meta-analysis demonstrates that RA is associated with an increased risk of stroke, supporting the recognition of RA as an independent stroke risk factor.

目的:本荟萃分析旨在评估类风湿关节炎(RA)与卒中风险之间的关系。方法:使用医学主题词(MeSH)和关键词检索PubMed、Cochrane Library和Embase从数据库建立到2025年10月7日发表的观察性研究。随机效应模型用于计算优势比(OR)和95%置信区间(CI),以评估类风湿关节炎和卒中风险之间的关联。所有统计分析均使用Stata统计软件17.0版本进行。采用漏斗图、Egger’s检验和Begg’s检验评价发表偏倚。结果:本荟萃分析包括2003年至2025年间发表的12项观察性研究,共有1,715,001名参与者。合并分析显示RA与卒中风险增加之间存在显著关联(OR = 1.35; 95% CI [1.26-1.45]; P = 0.000)。亚组分析显示,女性RA患者卒中风险略高于男性(OR = 1.60; 95% CI [1.19-2.16]; P = 0.002)。此外,65岁以上的RA患者卒中风险较高(OR = 1.24; 95% CI [1.02-1.50]; P = 0.032)。未发现显著的发表偏倚,敏感性分析证实了我们研究结果的稳健性。结论:本荟萃分析表明RA与卒中风险增加相关,支持RA作为独立卒中危险因素的认识。
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引用次数: 0
Organic amendments to potato soils inconsistently enrich yield-associated soil microbiota across growing regions of the continental US. 马铃薯土壤的有机改良剂不一致地丰富了美国大陆种植区与产量相关的土壤微生物群。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20595
Scott A Klasek, James E Crants, Kenneth E Frost, Brenda K Schroeder, Carl J Rosen, Linda L Kinkel

Plant health is regulated by complex consortia of soil microbes with growth-promoting and pathogenic functions. In potato production, various soil management practices are undertaken to boost yields and suppress diseases, but connections between these practices, soil microbiomes, and tuber yields have not been characterized across diverse growing regions. To identify growing practices and microbes associated with increased yields, we established four-year field trials across eight US sites from Oregon to Maine that consisted of controls, fumigations, organic amendments, and mustard incorporations. Amplicon sequencing of 16S ribosomal RNA (rRNA) genes and intergenic transcribed spacer (ITS) regions was used to investigate bacterial and eukaryotic soil microbiomes, respectively. Fumigation and organic amendment treatments increased tuber yields in 23% and 29% of treatments relative to controls. While soil treatments influenced both microbiome types differently across all field sites, eukaryotes were more sensitive than bacteria to all treatments. Across field sites, soil treatments impacted relative abundances of amplicon sequence variants (ASVs) to varying degrees, even among ASVs belonging to the same genus. Associations between ASVs and tuber yields similarly varied within genera, highlighting the lack of consistent yield-associated taxa across US growing regions. Nevertheless, forty-five "target ASVs" across nine bacterial and three fungal phyla were identified as both treatment-impacted and yield-associated within any particular field site. Models identified three of thirteen organic amendment scenarios and one of thirteen fumigation scenarios where increased relative abundances of specific target ASVs accounted for up to a 23% increase in tuber yields compared to control treatments. These ASVs were largely site-specific and not influenced by treatment-associated changes in soil nutrients or organic matter, highlighting complex relationships within field sites that require further study to achieve the goal of implementing sustainable, microbiome-informed potato production techniques.

植物健康是由具有促进生长和致病功能的土壤微生物的复杂联合体调节的。在马铃薯生产中,采取了各种土壤管理措施来提高产量和抑制病害,但这些措施、土壤微生物组和块茎产量之间的联系尚未在不同的种植区得到表征。为了确定与产量增加相关的种植方法和微生物,我们在从俄勒冈州到缅因州的八个美国地点建立了为期四年的田间试验,包括控制、熏蒸、有机改性和芥末混合。利用16S核糖体RNA (rRNA)基因扩增子测序和基因间转录间隔区(ITS)扩增子测序分别对细菌和真核生物土壤微生物组进行了研究。与对照相比,熏蒸和有机改良处理的块茎产量分别提高了23%和29%。虽然土壤处理对两种微生物类型的影响不同,但真核生物对所有土壤处理的敏感性都高于细菌。在不同的田间地点,土壤处理不同程度地影响了扩增子序列变异(asv)的相对丰度,即使在属于同一属的asv中也是如此。asv和块茎产量之间的关联在属内也有类似的变化,这突出了在美国种植区域缺乏一致的产量相关分类群。尽管如此,在任何特定的田间地点,在9个细菌和3个真菌门中确定了45个“目标asv”,这些asv既受处理影响,又与产量相关。模型确定了13种有机改良方案中的3种和13种熏蒸方案中的1种,其中特定目标asv相对丰度的增加与对照处理相比可使块茎产量增加23%。这些asv在很大程度上是特定地点的,不受土壤养分或有机质处理相关变化的影响,突出了田间地点之间的复杂关系,需要进一步研究,以实现可持续的、微生物组信息马铃薯生产技术的目标。
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引用次数: 0
Effects of exercise combined with brain stimulation on hand function in children with cerebral palsy: a meta-analysis of randomized controlled trials. 运动联合脑刺激对脑瘫儿童手功能的影响:随机对照试验的荟萃分析。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20670
Shuoqi Li, Shenhao Guo, Ruihan Wang, Jiayuan Ma, Hu Lou

Background: Cerebral palsy (CP) is a paediatric condition generally characterized by persistent motor disabilities in hand function. This review examined the impact of exercise with and without brain stimulation on hand function in children with CP.

Methodology: A systematic literature search was conducted from January 2010 to June 2025 across four electronic databases: Web of Science, Scopus, PubMed, and EBSCO. This review established the inclusion criteria as follows: 1. Children with CP; 2. Randomised controlled trial; 3. Exercise with and without brain stimulation; 4. Measurements included gross motor function (GMF), fine manual control (FMC) and grip strength (GS) evaluated at pre- and post-intervention. The quality of the included studies was assessed using the Cochrane Risk of Bias tool. For data analysis, the standardized mean difference (SMD) was selected as the appropriate effect size index, and RevMan 5.4 software was employed to analyze the mean differences in the data extracted from the included articles. (Registration number: CRD420251106181).

Results: The results showed that exercise with brain stimulation comprising more than 16 sessions could notably improve GS (SMD, 1.38 (0.88, 1.88), p < 0.05, I2 = 0%), whereas that comprising fewer than 10 sessions did not demonstrate a statistically significant effect (SMD, 0.19 (-0.29, 0.67), p = 0.44, I2 = 0%). Consequently, brain stimulation intervention could substantially enhance FMC (SMD, 0.46 (0.15, 0.76), p < 0.05, I2 = 47%). Subgroup analysis also presented that exercise with transcranial direct current stimulation (tDCS) resulted in a significant improvement in FMC (SMD, 0.71 (0.29, 1.14), p < 0.05, I2 = 49%) compared to exercise with repetitive transcranial magnetic stimulation (SMD, 0.19 (-0.25, 0.63), p = 0.09, I2 = 47%).

Conclusion: This review demonstrated that exercise with brain stimulation could significantly enhance hand function in children with CP. Specifically, more than 16 sessions has greater benefits for GS, and the tDCS may confer benefits for FMC.

背景:脑瘫(CP)是一种儿科疾病,通常以手部功能持续运动障碍为特征。研究方法:从2010年1月到2025年6月,对四个电子数据库进行了系统的文献检索:Web of Science、Scopus、PubMed和EBSCO。本综述确定的纳入标准如下:1。患有CP的儿童;2. 随机对照试验;3. 有或没有大脑刺激的运动;4. 测量包括大运动功能(GMF),精细手动控制(FMC)和握力(GS)在干预前和干预后评估。采用Cochrane偏倚风险工具评估纳入研究的质量。数据分析选择标准化均差(SMD)作为适宜的效应大小指标,采用RevMan 5.4软件对纳入文章中提取的数据进行均差分析。(注册号:CRD420251106181)。结果:结果显示,超过16次的脑刺激运动可以显著改善GS (SMD, 1.38 (0.88, 1.88), p 2 = 0%),而少于10次的脑刺激运动没有统计学上显著的效果(SMD, 0.19 (-0.29, 0.67), p = 0.44, I2 = 0%)。因此,脑刺激干预可显著增强FMC (SMD, 0.46 (0.15, 0.76), p 2 = 47%)。亚组分析还显示,与重复经颅磁刺激(SMD, 0.19 (-0.25, 0.63), p = 0.09, I2 = 47%)相比,经颅直流电刺激(tDCS)运动可显著改善FMC (SMD, 0.71 (0.29, 1.14), p 2 = 49%)。结论:本综述表明,脑刺激运动可以显著增强CP儿童的手功能。具体而言,超过16次的运动对GS有更大的益处,而tDCS可能对FMC有好处。
{"title":"Effects of exercise combined with brain stimulation on hand function in children with cerebral palsy: a meta-analysis of randomized controlled trials.","authors":"Shuoqi Li, Shenhao Guo, Ruihan Wang, Jiayuan Ma, Hu Lou","doi":"10.7717/peerj.20670","DOIUrl":"10.7717/peerj.20670","url":null,"abstract":"<p><strong>Background: </strong>Cerebral palsy (CP) is a paediatric condition generally characterized by persistent motor disabilities in hand function. This review examined the impact of exercise with and without brain stimulation on hand function in children with CP.</p><p><strong>Methodology: </strong>A systematic literature search was conducted from January 2010 to June 2025 across four electronic databases: Web of Science, Scopus, PubMed, and EBSCO. This review established the inclusion criteria as follows: 1. Children with CP; 2. Randomised controlled trial; 3. Exercise with and without brain stimulation; 4. Measurements included gross motor function (GMF), fine manual control (FMC) and grip strength (GS) evaluated at pre- and post-intervention. The quality of the included studies was assessed using the Cochrane Risk of Bias tool. For data analysis, the standardized mean difference (SMD) was selected as the appropriate effect size index, and RevMan 5.4 software was employed to analyze the mean differences in the data extracted from the included articles. (Registration number: CRD420251106181).</p><p><strong>Results: </strong>The results showed that exercise with brain stimulation comprising more than 16 sessions could notably improve GS (SMD, 1.38 (0.88, 1.88), <i>p</i> < 0.05, I<sup>2</sup> = 0%), whereas that comprising fewer than 10 sessions did not demonstrate a statistically significant effect (SMD, 0.19 (-0.29, 0.67), <i>p</i> = 0.44, I<sup>2</sup> = 0%). Consequently, brain stimulation intervention could substantially enhance FMC (SMD, 0.46 (0.15, 0.76), <i>p</i> < 0.05, I<sup>2</sup> = 47%). Subgroup analysis also presented that exercise with transcranial direct current stimulation (tDCS) resulted in a significant improvement in FMC (SMD, 0.71 (0.29, 1.14), <i>p</i> < 0.05, I<sup>2</sup> = 49%) compared to exercise with repetitive transcranial magnetic stimulation (SMD, 0.19 (-0.25, 0.63), <i>p</i> = 0.09, I<sup>2</sup> = 47%).</p><p><strong>Conclusion: </strong>This review demonstrated that exercise with brain stimulation could significantly enhance hand function in children with CP. Specifically, more than 16 sessions has greater benefits for GS, and the tDCS may confer benefits for FMC.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20670"},"PeriodicalIF":2.4,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12861132/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146106629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sperm chromatin condensation defects and IVF outcomes: a retrospective cohort study. 精子染色质凝聚缺陷与体外受精结果:一项回顾性队列研究。
IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2026-01-29 eCollection Date: 2026-01-01 DOI: 10.7717/peerj.20749
Wen Zhou, Shan Lu, Aiai Wang, Manbo Jiang, Sinan Li, Huanqun Zhou

Background: The clinical impact of sperm chromatin condensation defects (SCCD) on in vitro fertilization (IVF) outcomes remains controversial. This study aimed to clarify the effects of SCCD on embryonic development, pregnancy, and neonatal outcomes in couples undergoing their first IVF cycle.

Methods: This retrospective cohort study included 647 couples. Multivariable logistic regression was used to evaluate associations between SCCD (assessed by aniline blue staining) and clinical outcomes, with stratification and generalized additive models employed to identify effect modifiers and nonlinear relationships.

Results: Elevated SCCD levels (≥30%) were correlated with abnormal conventional semen parameters and a reduced two-pronuclei (2PN) cleavage rate, whereas no significant associations were observed with spontaneous abortion, gestational age, birth weight, or neonatal sex distribution. After adjusting for key confounders, increasing SCCD levels remained independently associated with reduced clinical pregnancy (OR = 0.98, P = 0.01) and live birth rates (OR = 0.98, P = 0.02), and no significant effect modification by any subgroup variable was observed (all P for interaction > 0.05). Moreover, individuals with SCCD levels ≥30% showed a trend toward substantially reduced clinical pregnancy (OR = 0.64, P = 0.05) and live birth rates (OR = 0.65, P = 0.06). Nonlinear analysis further identified a significant risk threshold for live birth at 10.6% (OR = 0.86, P = 0.01), with risk plateauing until a declining trend emerged beyond 24.1%.

Conclusions: This study provides evidence that SCCD is independently associated with reduced IVF success, supporting its assessment in pre-IVF evaluation.

背景:精子染色质凝聚缺陷(SCCD)对体外受精(IVF)结果的临床影响仍然存在争议。本研究旨在阐明SCCD对第一次IVF周期夫妇胚胎发育、妊娠和新生儿结局的影响。方法:回顾性队列研究纳入647对夫妇。采用多变量logistic回归来评估SCCD(苯胺蓝染色评估)与临床结果之间的关联,并采用分层和广义加性模型来确定效果修饰因子和非线性关系。结果:SCCD水平升高(≥30%)与常规精液参数异常和双原核(2PN)卵裂率降低相关,而与自然流产、胎龄、出生体重或新生儿性别分布无显著关联。在调整关键混杂因素后,SCCD水平升高与临床妊娠减少(OR = 0.98, P = 0.01)和活产率(OR = 0.98, P = 0.02)仍然独立相关,且未观察到任何亚组变量的显著影响改变(相互作用P均为0.05)。此外,SCCD水平≥30%的个体临床妊娠率(OR = 0.64, P = 0.05)和活产率(OR = 0.65, P = 0.06)显著降低。非线性分析进一步确定活产的显著风险阈值为10.6% (OR = 0.86, P = 0.01),风险趋于稳定,直到超过24.1%后出现下降趋势。结论:本研究提供了SCCD与IVF成功率降低独立相关的证据,支持其在IVF前评估中的评估。
{"title":"Sperm chromatin condensation defects and IVF outcomes: a retrospective cohort study.","authors":"Wen Zhou, Shan Lu, Aiai Wang, Manbo Jiang, Sinan Li, Huanqun Zhou","doi":"10.7717/peerj.20749","DOIUrl":"10.7717/peerj.20749","url":null,"abstract":"<p><strong>Background: </strong>The clinical impact of sperm chromatin condensation defects (SCCD) on <i>in vitro</i> fertilization (IVF) outcomes remains controversial. This study aimed to clarify the effects of SCCD on embryonic development, pregnancy, and neonatal outcomes in couples undergoing their first IVF cycle.</p><p><strong>Methods: </strong>This retrospective cohort study included 647 couples. Multivariable logistic regression was used to evaluate associations between SCCD (assessed by aniline blue staining) and clinical outcomes, with stratification and generalized additive models employed to identify effect modifiers and nonlinear relationships.</p><p><strong>Results: </strong>Elevated SCCD levels (≥30%) were correlated with abnormal conventional semen parameters and a reduced two-pronuclei (2PN) cleavage rate, whereas no significant associations were observed with spontaneous abortion, gestational age, birth weight, or neonatal sex distribution. After adjusting for key confounders, increasing SCCD levels remained independently associated with reduced clinical pregnancy (OR = 0.98, <i>P</i> = 0.01) and live birth rates (OR = 0.98, <i>P</i> = 0.02), and no significant effect modification by any subgroup variable was observed (all <i>P</i> for interaction > 0.05). Moreover, individuals with SCCD levels ≥30% showed a trend toward substantially reduced clinical pregnancy (OR = 0.64, <i>P</i> = 0.05) and live birth rates (OR = 0.65, <i>P</i> = 0.06). Nonlinear analysis further identified a significant risk threshold for live birth at 10.6% (OR = 0.86, <i>P</i> = 0.01), with risk plateauing until a declining trend emerged beyond 24.1%.</p><p><strong>Conclusions: </strong>This study provides evidence that SCCD is independently associated with reduced IVF success, supporting its assessment in pre-IVF evaluation.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"14 ","pages":"e20749"},"PeriodicalIF":2.4,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12861134/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146106701","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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