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Cryphonectriaceae on Myrtales in China: phylogeny, host range, and pathogenicity. 中国桃金娘科植物:系统发育、寄主范围和致病性。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-12-01 Epub Date: 2020-01-21 DOI: 10.3767/persoonia.2020.45.04
W Wang, G Q Li, Q L Liu, S F Chen

Plantation-grown Eucalyptus (Myrtaceae) and other trees residing in the Myrtales have been widely planted in southern China. These fungal pathogens include species of Cryphonectriaceae that are well-known to cause stem and branch canker disease on Myrtales trees. During recent disease surveys in southern China, sporocarps with typical characteristics of Cryphonectriaceae were observed on the surfaces of cankers on the stems and branches of Myrtales trees. In this study, a total of 164 Cryphonectriaceae isolates were identified based on comparisons of DNA sequences of the partial conserved nuclear large subunit (LSU) ribosomal DNA, internal transcribed spacer (ITS) regions including the 5.8S gene of the ribosomal DNA operon, two regions of the β-tubulin (tub2/tub1) gene, and the translation elongation factor 1-alpha (tef1) gene region, as well as their morphological characteristics. The results showed that eight species reside in four genera of Cryphonectriaceae occurring on the genera Eucalyptus, Melastoma (Melastomataceae), Psidium (Myrtaceae), Syzygium (Myrtaceae), and Terminalia (Combretaceae) in Myrtales. These fungal species include Chrysoporthe deuterocubensis, Celoporthe syzygii, Cel. eucalypti, Cel. guangdongensis, Cel. cerciana, a new genus and two new species, as well as one new species of Aurifilum. These new taxa are hereby described as Parvosmorbus gen. nov., Par. eucalypti sp. nov., Par. guangdongensis sp. nov., and Aurifilum terminali sp. nov. Pathogenicity tests showed that the eight species of Cryphonectriaceae are pathogenic to two Eucalyptus hybrid seedlings, Melastoma sanguineum branches, and Psidium guajava and Syzygium jambos seedlings. The overall data showed that Chr. deuterocubensis is the most aggressive, followed by Par. eucalypti. Significant differences in tolerance were observed between the two tested Eucalyptus hybrid genotypes, suggesting that disease-tolerant genotypes can be selected for disease management in the Eucalyptus industry.

人工林种植的桉树(桃金娘科)和其他栖息在桃金娘科的树木在中国南方被广泛种植。这些真菌病原体包括已知引起桃金娘树茎和枝溃疡病的Cryphonectriaceae物种。近年来,在中国南方的桃金娘病调查中,在桃金娘树干和树枝的溃疡病表面观察到具有桃金娘科典型特征的孢子囊。本研究通过比较部分保守核大亚基(LSU)核糖体DNA、核糖体DNA操纵子5.8S基因在内的内部转录间隔区(ITS)、β-微管蛋白(tub2/tub1)基因两个区域和翻译延伸因子1- α (tef1)基因区域的DNA序列及其形态特征,鉴定了164株Cryphonectriaceae分离物。结果表明:金雀花属4属共8种,分布于金雀花属桉树属、金雀花科、金雀花科、金雀花科和金雀花科。这些真菌种类包括deuterocubensis, syzygii, Celoporthe。桉树,玻璃纸。guangdongensis玻璃纸。发现茜草属一新属、二新种、金缕草属一新种。这些新分类群分别为Parvosmorbus gen. nov.、Par. Eucalyptus sp. nov.、Par. guangdongensis sp. nov.和Aurifilum terminali sp. nov.。致病性试验表明,这8种Cryphonectriaceae植物对两种桉树杂交苗(Melastoma sanguineum枝条)和番石榴(Psidium guajava)和Syzygium jambos幼苗具有致病性。总体数据显示,Chr。deuterocubensis最具攻击性,其次是Par. eucalyptus。两种桉树杂交基因型在耐受性方面存在显著差异,表明可以选择抗病基因型用于桉树产业的疾病管理。
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引用次数: 9
High diversity of Diaporthe species associated with pear shoot canker in China. 中国梨枝溃疡病伴生孢子的高度多样性。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-12-01 Epub Date: 2020-02-06 DOI: 10.3767/persoonia.2020.45.05
Y S Guo, P W Crous, Q Bai, M Fu, M M Yang, X H Wang, Y M Du, N Hong, W X Xu, G P Wang

Species of Diaporthe (syn. Phomopsis) are important endophytes, saprobes and pathogens, infecting a wide range of plants and resulting in important crop diseases. However, the species occurring on pear remain largely unresolved. In this study, a total of 453 Diaporthe isolates were obtained from branches of Pyrus plants (including P. bretschneideri, P. communis, P. pyrifolia and P. ussuriensis collected from 12 provinces in China) showing shoot canker symptoms. Phylogenetic analyses based on five loci (ITS, TEF, CAL, HIS, and TUB) coupled with morphology of 113 representative isolates revealed that 19 Diaporthe species were isolated, representing 13 known species (including D. caryae, D. cercidis, D. citrichinensis, D. eres, D. fusicola, D. ganjae, D. hongkongensis, D. padina, D. pescicola, D. sojae, D. taoicola, D. unshiuensis and D. velutina) and six new species described here as D. acuta, D. chongqingensis, D. fulvicolor, D. parvae, D. spinosa and D. zaobaisu. Although Koch's postulates confirmed all species to be pathogenic, a high degree of variation in aggressiveness was observed. Moreover, these species have a high diversity, plasticity, and prevalence related to the geographical location and pear species involved.

Diaporthe (syn. Phomopsis)是一种重要的内生菌、腐殖菌和病原菌,广泛侵染植物,造成重要的作物病害。然而,发生在梨上的物种在很大程度上仍未解决。本研究从中国12个省的梨属植物枝条(包括P. bretschneideri、P. communis、P. pyrifolia和P. ussuriensis)中分离得到453株具有茎部溃疡病症状的Diaporthe菌株。基于ITS、TEF、CAL、HIS和TUB 5个基因座的系统发育分析,结合113个代表性分离物的形态特征,共分离到19个Diaporthe种,包括13个已知种(包括D. caryae、D. cercidis、D. citrichinensis、D. eres、D. fusicola、D. ganjae、D. hongkongensis、D. padina、D. pescicola、D. sojae、D. taoicola、D. unshiuensis和D. velutina)和6个新种(D. acuta、D. chongqingensis、D. fulvicolor、D. parvae、D. blacuta、D. clacqingensis)。皮诺莎和早白素。虽然科赫的假设证实了所有的物种都是致病的,但在侵袭性方面观察到高度的差异。此外,这些物种具有较高的多样性、可塑性和流行度,与地理位置和涉及的梨种有关。
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引用次数: 46
Multi-gene phylogeny and taxonomy of Amauroderma s.lat. (Ganodermataceae). 黑皮病的多基因系统发育与分类。(灵芝科)。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-05-04 DOI: 10.3767/persoonia.2020.44.08
Y-F Sun, D H Costa-Rezende, J-H Xing, J-L Zhou, B Zhang, T B Gibertoni, G Gates, M Glen, Y-C Dai, B-K Cui

Amauroderma s.lat. has been defined mainly by the morphological features of non-truncate and double-walled basidiospores with a distinctly ornamented endospore wall. In this work, taxonomic and phylogenetic studies on species of Amauroderma s.lat. are carried out by morphological examination together with ultrastructural observations, and molecular phylogenetic analyses of multiple loci including the internal transcribed spacer regions (ITS), the large subunit of nuclear ribosomal RNA gene (nLSU), the largest subunit of RNA polymerase II (RPB1) and the second largest subunit of RNA polymerase II (RPB2), the translation elongation factor 1-α gene (TEF) and the β-tubulin gene (TUB). The results demonstrate that species of Ganodermataceae formed ten clades. Species previously placed in Amauroderma s.lat. are divided into four clades: Amauroderma s.str., Foraminispora, Furtadoa and a new genus Sanguinoderma. The classification of Amauroderma s.lat. is thus revised, six new species are described and illustrated, and eight new combinations are proposed. SEM micrographs of basidiospores of Foraminispora and Sanguinoderma are provided, and the importance of SEM in delimitation of taxa in this study is briefly discussed. Keys to species of Amauroderma s.str., Foraminispora, Furtadoa, and Sanguinoderma are also provided.

Amauroderma s.lat。主要由非截形和双壁担子孢子的形态特征来定义,孢子内壁有明显的装饰。本文对黑霉属植物的分类和系统发育进行了研究。通过形态学检查和超微结构观察,对其内部转录间隔区(ITS)、核糖体RNA基因大亚基(nLSU)、RNA聚合酶II最大亚基(RPB1)和第二大亚基(RPB2)、翻译延伸因子1-α基因(TEF)和β-微管蛋白基因(TUB)等多个基因座进行了分子系统发育分析。结果表明,灵芝科植物共有10个支系。以前被归入黑霉属的种。分为四个支系:无毛真皮;,有孔虫目,Furtadoa和一新属Sanguinoderma。黑皮病的分类。据此修订,描述和说明了6个新种,并提出了8个新的组合。给出了有孔虫和血皮虫的担子孢子的扫描电镜照片,并简要讨论了扫描电镜在本研究分类群划分中的重要性。黑皮病的种键。也有有孔虫、富塔多亚和血皮。
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引用次数: 41
Fungal Planet description sheets: 1042-1111. 真菌星球描述表:1042-1111。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-06-29 DOI: 10.3767/persoonia.2020.44.11
P W Crous, M J Wingfield, Y-H Chooi, C L M Gilchrist, E Lacey, J I Pitt, F Roets, W J Swart, J F Cano-Lira, N Valenzuela-Lopez, V Hubka, R G Shivas, A M Stchigel, D G Holdom, Ž Jurjević, A V Kachalkin, T Lebel, C Lock, M P Martín, Y P Tan, M A Tomashevskaya, J S Vitelli, I G Baseia, V K Bhatt, T E Brandrud, J T De Souza, B Dima, H J Lacey, L Lombard, P R Johnston, A Morte, V Papp, A Rodríguez, E Rodríguez-Andrade, K C Semwal, L Tegart, Z G Abad, A Akulov, P Alvarado, A Alves, J P Andrade, F Arenas, C Asenjo, J Ballarà, M D Barrett, L M Berná, A Berraf-Tebbal, M V Bianchinotti, K Bransgrove, T I Burgess, F S Carmo, R Chávez, A Čmoková, J D W Dearnaley, A L C M de A Santiago, J F Freitas-Neto, S Denman, B Douglas, F Dovana, A Eichmeier, F Esteve-Raventós, A Farid, A G Fedosova, G Ferisin, R J Ferreira, A Ferrer, C N Figueiredo, Y F Figueiredo, C G Reinoso-Fuentealba, I Garrido-Benavent, C F Cañete-Gibas, C Gil-Durán, A M Glushakova, M F M Gonçalves, M González, M Gorczak, C Gorton, F E Guard, A L Guarnizo, J Guarro, M Gutiérrez, P Hamal, L T Hien, A D Hocking, J Houbraken, G C Hunter, C A Inácio, M Jourdan, V I Kapitonov, L Kelly, T N Khanh, K Kisło, L Kiss, A Kiyashko, M Kolařík, J Kruse, A Kubátová, V Kučera, I Kučerová, I Kušan, H B Lee, G Levicán, A Lewis, N V Liem, K Liimatainen, H J Lim, M N Lyons, J G Maciá-Vicente, V Magaña-Dueñas, R Mahiques, E F Malysheva, P A S Marbach, P Marinho, N Matočec, A R McTaggart, A Mešić, L Morin, J M Muñoz-Mohedano, A Navarro-Ródenas, C P Nicolli, R L Oliveira, E Otsing, C L Ovrebo, T A Pankratov, A Paños, A Paz-Conde, A Pérez-Sierra, C Phosri, Á Pintos, A Pošta, S Prencipe, E Rubio, A Saitta, L S Sales, L Sanhueza, L A Shuttleworth, J Smith, M E Smith, D Spadaro, M Spetik, M Sochor, Z Sochorová, J O Sousa, N Suwannasai, L Tedersoo, H M Thanh, L D Thao, Z Tkalčec, N Vaghefi, A S Venzhik, A Verbeken, A Vizzini, S Voyron, M Wainhouse, A J S Whalley, M Wrzosek, M Zapata, I Zeil-Rolfe, J Z Groenewald
<p><p>Novel species of fungi described in this study include those from various countries as follows: <b>Antarctica</b>, <i>Cladosporium arenosum</i> from marine sediment sand. <b>Argentina</b>, <i>Kosmimatamyces alatophylus</i> (incl. <i>Kosmimatamyces</i> gen. nov.) from soil. <b>Australia</b>, <i>Aspergillus banksianus</i>, <i>Aspergillus kumbius</i>, <i>Aspergillus luteorubrus</i>, <i>Aspergillus malvicolor</i> and <i>Aspergillus nanangensis</i> from soil, <i>Erysiphe medicaginis</i> from leaves of <i>Medicago polymorpha</i>, <i>Hymenotorrendiella communis</i> on leaf litter of <i>Eucalyptus bicostata</i>, <i>Lactifluus albopicri</i> and <i>Lactifluus austropiperatus</i> on soil, <i>Macalpinomyces collinsiae</i> on <i>Eriachne benthamii</i>, <i>Marasmius vagus</i> on soil, <i>Microdochium dawsoniorum</i> from leaves of <i>Sporobolus natalensis</i>, <i>Neopestalotiopsis nebuloides</i> from leaves of <i>Sporobolus elongatus</i>, <i>Pestalotiopsis etonensis</i> from leaves of <i>Sporobolus jacquemontii</i>, <i>Phytophthora personensis</i> from soil associated with dying <i>Grevillea mccutcheonii.</i> <b>Brazil</b>, <i>Aspergillus oxumiae</i> from soil, <i>Calvatia baixaverdensis</i> on soil, <i>Geastrum calycicoriaceum</i> on leaf litter, <i>Greeneria kielmeyerae</i> on leaf spots of <i>Kielmeyera coriacea</i>. <b>Chile</b>, <i>Phytophthora aysenensis</i> on collar rot and stem of <i>Aristotelia chilensis.</i> <b>Croatia</b>, <i>Mollisia gibbospora</i> on fallen branch of <i>Fagus sylvatica.</i> <b>Czech Republic</b>, <i>Neosetophoma hnaniceana</i> from <i>Buxus sempervirens.</i> <b>Ecuador</b>, <i>Exophiala frigidotolerans</i> from soil. <b>Estonia</b>, <i>Elaphomyces bucholtzii</i> in soil. <b>France</b>, <i>Venturia paralias</i> from leaves of <i>Euphorbia paralias.</i> <b>India</b>, <i>Cortinarius balteatoindicus</i> and <i>Cortinarius ulkhagarhiensis</i> on leaf litter. <b>Indonesia</b>, <i>Hymenotorrendiella indonesiana</i> on <i>Eucalyptus urophylla</i> leaf litter. <b>Italy</b>, <i>Penicillium taurinense</i> from indoor chestnut mill. <b>Malaysia</b>, <i>Hemileucoglossum kelabitense</i> on soil, <i>Satchmopsis pini</i> on dead needles of <i>Pinus tecunumanii.</i> <b>Poland</b>, <i>Lecanicillium praecognitum</i> on insects' frass. <b>Portugal</b>, <i>Neodevriesia aestuarina</i> from saline water. <b>Republic of Korea</b>, <i>Gongronella namwonensis</i> from freshwater. <b>Russia</b>, <i>Candida pellucida</i> from <i>Exomias pellucidus</i>, <i>Heterocephalacria septentrionalis</i> as endophyte from <i>Cladonia rangiferina</i>, <i>Vishniacozyma phoenicis</i> from dates fruit, <i>Volvariella paludosa</i> from swamp. <b>Slovenia</b>, <i>Mallocybe crassivelata</i> on soil. <b>South Africa</b>, <i>Beltraniella podocarpi</i>, <i>Hamatocanthoscypha podocarpi</i>, <i>Coleophoma podocarpi</i> and <i>Nothoseiridium podocarpi</i> (incl. <i>Nothoseiridium</i> gen. nov.) from leaves of <i>Podocarpus latifolius</i>, <i>Gyrothrix encephalarti</i> from le
本研究中描述的真菌新种包括:来自南极洲海洋沉积物砂中的Cladosporium arennosum。阿根廷,土壤中的Kosmimatamyces alatophylus(包括Kosmimatamyces gen. 11 .)。澳大利亚:土壤中的河岸曲霉、kumbius曲霉、黄褐曲霉、malvicolus曲霉、nanangensis曲霉、紫花苜蓿叶片中的紫花曲霉、双生桉树凋落叶上的城市膜虫菌、土壤中的白纹乳菌和austropiperatus乳菌、beniachne benthamii上的colcolpinomyces、土壤中的Marasmius迷走菌、Sporobolus natalensis叶片中的dawsonimicromicroium、从长孢子虫的叶片中提取出新拟盘多毛孢,从雅奎蒙孢子虫的叶片中提取出eton拟盘多毛孢,从死亡的麦卡氏绿蝇相关土壤中提取出人疫霉。巴西,土壤中的氧曲霉,土壤中的白藜芦醇,凋落叶上的萼黄芪,木犀草叶斑上的绿霉。智利,智利亚里斯多德腐茎和茎上的aysen疫霉。克罗地亚,在山毛榉(Fagus sylvatica)的倒枝上的长孢木。捷克共和国,产自长尾狐猴(Buxus sempervirens)。厄瓜多尔,产自土壤中的耐冷型外孢子虫。爱沙尼亚,土壤中的布丘尔齐Elaphomyces bucholtzii。法国,产自大戟叶。枯落叶上的印度、balteatoindicus和ulkhagarhiensis。印度尼西亚,尾叶桉凋落叶上的印尼膜虫。意大利,产自室内板栗磨坊的牛头青霉。马来西亚,土壤上的kelabitense,松在tecunumanii的死针叶上的Satchmopsis pini。波兰,昆虫草上的Lecanicillium praecognitum。葡萄牙,产自咸水的nedevriesia aestuina。韩国,产自淡水的namwongongronella。来自俄罗斯的透明念珠菌来自透明异种,七头异头菌来自长叶蛙,凤凰果胶菌来自枣子,水草菌来自沼泽。斯洛文尼亚,土壤中的Mallocybe crassivelata。来自南非的发现有:黑桫椤(Beltraniella)、黑桫椤(Hamatocanthoscypha podocarpi)、黑桫椤(coleophhoma podocarpi)和黑桫椤(Nothoseiridium Nothoseiridium);来自脑桫椤(Encephalartos sp.)的脑桫椤(Gyrothrix encephalarti);来自人类患者皮肤的皮肤旁寄生(Paraphyton);西班牙:土壤中的卡巴纳氏菌(Cladophialophora cabanerensis),土壤中的paezii (Cortinarius paezii),广玉兰叶片中的木兰柱孢菌,植物残骸中的柱孢赤眼蜂(Trichophoma gen. 11 .),钙质土壤中的alcaracense块茎,钙质土壤中的布氏块茎。泰国,生在树皮上的梭梭,取自未知豆科植物叶子的丝状豆荚。英国,番荔枝枝病变上的黄体树孔菌,乌克兰栎心材上的金丝霉,芦苇叶上的金缕霉。美国:空气中的拟青霉;加利福尼亚Juncomyces(包括Juncomyces gener11 .)来自柳橙叶;柱状孢子山霉属(Montagnula圆筒孢)来自人体皮肤样本;俄克拉克拉州muriphilae(包括Muriphila gener11 .)在酒精蒸馏厂的外墙上;桉树桉叶中的neofabrarea Eucalyptus;白杨叶斑叶上的白桦假针叶。越南,腐木上的杜鹃枝上的杜鹃和假剌剌罗氏霉。DNA条形码支持形态和培养特征。
{"title":"Fungal Planet description sheets: 1042-1111.","authors":"P W Crous,&nbsp;M J Wingfield,&nbsp;Y-H Chooi,&nbsp;C L M Gilchrist,&nbsp;E Lacey,&nbsp;J I Pitt,&nbsp;F Roets,&nbsp;W J Swart,&nbsp;J F Cano-Lira,&nbsp;N Valenzuela-Lopez,&nbsp;V Hubka,&nbsp;R G Shivas,&nbsp;A M Stchigel,&nbsp;D G Holdom,&nbsp;Ž Jurjević,&nbsp;A V Kachalkin,&nbsp;T Lebel,&nbsp;C Lock,&nbsp;M P Martín,&nbsp;Y P Tan,&nbsp;M A Tomashevskaya,&nbsp;J S Vitelli,&nbsp;I G Baseia,&nbsp;V K Bhatt,&nbsp;T E Brandrud,&nbsp;J T De Souza,&nbsp;B Dima,&nbsp;H J Lacey,&nbsp;L Lombard,&nbsp;P R Johnston,&nbsp;A Morte,&nbsp;V Papp,&nbsp;A Rodríguez,&nbsp;E Rodríguez-Andrade,&nbsp;K C Semwal,&nbsp;L Tegart,&nbsp;Z G Abad,&nbsp;A Akulov,&nbsp;P Alvarado,&nbsp;A Alves,&nbsp;J P Andrade,&nbsp;F Arenas,&nbsp;C Asenjo,&nbsp;J Ballarà,&nbsp;M D Barrett,&nbsp;L M Berná,&nbsp;A Berraf-Tebbal,&nbsp;M V Bianchinotti,&nbsp;K Bransgrove,&nbsp;T I Burgess,&nbsp;F S Carmo,&nbsp;R Chávez,&nbsp;A Čmoková,&nbsp;J D W Dearnaley,&nbsp;A L C M de A Santiago,&nbsp;J F Freitas-Neto,&nbsp;S Denman,&nbsp;B Douglas,&nbsp;F Dovana,&nbsp;A Eichmeier,&nbsp;F Esteve-Raventós,&nbsp;A Farid,&nbsp;A G Fedosova,&nbsp;G Ferisin,&nbsp;R J Ferreira,&nbsp;A Ferrer,&nbsp;C N Figueiredo,&nbsp;Y F Figueiredo,&nbsp;C G Reinoso-Fuentealba,&nbsp;I Garrido-Benavent,&nbsp;C F Cañete-Gibas,&nbsp;C Gil-Durán,&nbsp;A M Glushakova,&nbsp;M F M Gonçalves,&nbsp;M González,&nbsp;M Gorczak,&nbsp;C Gorton,&nbsp;F E Guard,&nbsp;A L Guarnizo,&nbsp;J Guarro,&nbsp;M Gutiérrez,&nbsp;P Hamal,&nbsp;L T Hien,&nbsp;A D Hocking,&nbsp;J Houbraken,&nbsp;G C Hunter,&nbsp;C A Inácio,&nbsp;M Jourdan,&nbsp;V I Kapitonov,&nbsp;L Kelly,&nbsp;T N Khanh,&nbsp;K Kisło,&nbsp;L Kiss,&nbsp;A Kiyashko,&nbsp;M Kolařík,&nbsp;J Kruse,&nbsp;A Kubátová,&nbsp;V Kučera,&nbsp;I Kučerová,&nbsp;I Kušan,&nbsp;H B Lee,&nbsp;G Levicán,&nbsp;A Lewis,&nbsp;N V Liem,&nbsp;K Liimatainen,&nbsp;H J Lim,&nbsp;M N Lyons,&nbsp;J G Maciá-Vicente,&nbsp;V Magaña-Dueñas,&nbsp;R Mahiques,&nbsp;E F Malysheva,&nbsp;P A S Marbach,&nbsp;P Marinho,&nbsp;N Matočec,&nbsp;A R McTaggart,&nbsp;A Mešić,&nbsp;L Morin,&nbsp;J M Muñoz-Mohedano,&nbsp;A Navarro-Ródenas,&nbsp;C P Nicolli,&nbsp;R L Oliveira,&nbsp;E Otsing,&nbsp;C L Ovrebo,&nbsp;T A Pankratov,&nbsp;A Paños,&nbsp;A Paz-Conde,&nbsp;A Pérez-Sierra,&nbsp;C Phosri,&nbsp;Á Pintos,&nbsp;A Pošta,&nbsp;S Prencipe,&nbsp;E Rubio,&nbsp;A Saitta,&nbsp;L S Sales,&nbsp;L Sanhueza,&nbsp;L A Shuttleworth,&nbsp;J Smith,&nbsp;M E Smith,&nbsp;D Spadaro,&nbsp;M Spetik,&nbsp;M Sochor,&nbsp;Z Sochorová,&nbsp;J O Sousa,&nbsp;N Suwannasai,&nbsp;L Tedersoo,&nbsp;H M Thanh,&nbsp;L D Thao,&nbsp;Z Tkalčec,&nbsp;N Vaghefi,&nbsp;A S Venzhik,&nbsp;A Verbeken,&nbsp;A Vizzini,&nbsp;S Voyron,&nbsp;M Wainhouse,&nbsp;A J S Whalley,&nbsp;M Wrzosek,&nbsp;M Zapata,&nbsp;I Zeil-Rolfe,&nbsp;J Z Groenewald","doi":"10.3767/persoonia.2020.44.11","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.11","url":null,"abstract":"&lt;p&gt;&lt;p&gt;Novel species of fungi described in this study include those from various countries as follows: &lt;b&gt;Antarctica&lt;/b&gt;, &lt;i&gt;Cladosporium arenosum&lt;/i&gt; from marine sediment sand. &lt;b&gt;Argentina&lt;/b&gt;, &lt;i&gt;Kosmimatamyces alatophylus&lt;/i&gt; (incl. &lt;i&gt;Kosmimatamyces&lt;/i&gt; gen. nov.) from soil. &lt;b&gt;Australia&lt;/b&gt;, &lt;i&gt;Aspergillus banksianus&lt;/i&gt;, &lt;i&gt;Aspergillus kumbius&lt;/i&gt;, &lt;i&gt;Aspergillus luteorubrus&lt;/i&gt;, &lt;i&gt;Aspergillus malvicolor&lt;/i&gt; and &lt;i&gt;Aspergillus nanangensis&lt;/i&gt; from soil, &lt;i&gt;Erysiphe medicaginis&lt;/i&gt; from leaves of &lt;i&gt;Medicago polymorpha&lt;/i&gt;, &lt;i&gt;Hymenotorrendiella communis&lt;/i&gt; on leaf litter of &lt;i&gt;Eucalyptus bicostata&lt;/i&gt;, &lt;i&gt;Lactifluus albopicri&lt;/i&gt; and &lt;i&gt;Lactifluus austropiperatus&lt;/i&gt; on soil, &lt;i&gt;Macalpinomyces collinsiae&lt;/i&gt; on &lt;i&gt;Eriachne benthamii&lt;/i&gt;, &lt;i&gt;Marasmius vagus&lt;/i&gt; on soil, &lt;i&gt;Microdochium dawsoniorum&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus natalensis&lt;/i&gt;, &lt;i&gt;Neopestalotiopsis nebuloides&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus elongatus&lt;/i&gt;, &lt;i&gt;Pestalotiopsis etonensis&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus jacquemontii&lt;/i&gt;, &lt;i&gt;Phytophthora personensis&lt;/i&gt; from soil associated with dying &lt;i&gt;Grevillea mccutcheonii.&lt;/i&gt; &lt;b&gt;Brazil&lt;/b&gt;, &lt;i&gt;Aspergillus oxumiae&lt;/i&gt; from soil, &lt;i&gt;Calvatia baixaverdensis&lt;/i&gt; on soil, &lt;i&gt;Geastrum calycicoriaceum&lt;/i&gt; on leaf litter, &lt;i&gt;Greeneria kielmeyerae&lt;/i&gt; on leaf spots of &lt;i&gt;Kielmeyera coriacea&lt;/i&gt;. &lt;b&gt;Chile&lt;/b&gt;, &lt;i&gt;Phytophthora aysenensis&lt;/i&gt; on collar rot and stem of &lt;i&gt;Aristotelia chilensis.&lt;/i&gt; &lt;b&gt;Croatia&lt;/b&gt;, &lt;i&gt;Mollisia gibbospora&lt;/i&gt; on fallen branch of &lt;i&gt;Fagus sylvatica.&lt;/i&gt; &lt;b&gt;Czech Republic&lt;/b&gt;, &lt;i&gt;Neosetophoma hnaniceana&lt;/i&gt; from &lt;i&gt;Buxus sempervirens.&lt;/i&gt; &lt;b&gt;Ecuador&lt;/b&gt;, &lt;i&gt;Exophiala frigidotolerans&lt;/i&gt; from soil. &lt;b&gt;Estonia&lt;/b&gt;, &lt;i&gt;Elaphomyces bucholtzii&lt;/i&gt; in soil. &lt;b&gt;France&lt;/b&gt;, &lt;i&gt;Venturia paralias&lt;/i&gt; from leaves of &lt;i&gt;Euphorbia paralias.&lt;/i&gt; &lt;b&gt;India&lt;/b&gt;, &lt;i&gt;Cortinarius balteatoindicus&lt;/i&gt; and &lt;i&gt;Cortinarius ulkhagarhiensis&lt;/i&gt; on leaf litter. &lt;b&gt;Indonesia&lt;/b&gt;, &lt;i&gt;Hymenotorrendiella indonesiana&lt;/i&gt; on &lt;i&gt;Eucalyptus urophylla&lt;/i&gt; leaf litter. &lt;b&gt;Italy&lt;/b&gt;, &lt;i&gt;Penicillium taurinense&lt;/i&gt; from indoor chestnut mill. &lt;b&gt;Malaysia&lt;/b&gt;, &lt;i&gt;Hemileucoglossum kelabitense&lt;/i&gt; on soil, &lt;i&gt;Satchmopsis pini&lt;/i&gt; on dead needles of &lt;i&gt;Pinus tecunumanii.&lt;/i&gt; &lt;b&gt;Poland&lt;/b&gt;, &lt;i&gt;Lecanicillium praecognitum&lt;/i&gt; on insects' frass. &lt;b&gt;Portugal&lt;/b&gt;, &lt;i&gt;Neodevriesia aestuarina&lt;/i&gt; from saline water. &lt;b&gt;Republic of Korea&lt;/b&gt;, &lt;i&gt;Gongronella namwonensis&lt;/i&gt; from freshwater. &lt;b&gt;Russia&lt;/b&gt;, &lt;i&gt;Candida pellucida&lt;/i&gt; from &lt;i&gt;Exomias pellucidus&lt;/i&gt;, &lt;i&gt;Heterocephalacria septentrionalis&lt;/i&gt; as endophyte from &lt;i&gt;Cladonia rangiferina&lt;/i&gt;, &lt;i&gt;Vishniacozyma phoenicis&lt;/i&gt; from dates fruit, &lt;i&gt;Volvariella paludosa&lt;/i&gt; from swamp. &lt;b&gt;Slovenia&lt;/b&gt;, &lt;i&gt;Mallocybe crassivelata&lt;/i&gt; on soil. &lt;b&gt;South Africa&lt;/b&gt;, &lt;i&gt;Beltraniella podocarpi&lt;/i&gt;, &lt;i&gt;Hamatocanthoscypha podocarpi&lt;/i&gt;, &lt;i&gt;Coleophoma podocarpi&lt;/i&gt; and &lt;i&gt;Nothoseiridium podocarpi&lt;/i&gt; (incl. &lt;i&gt;Nothoseiridium&lt;/i&gt; gen. nov.) from leaves of &lt;i&gt;Podocarpus latifolius&lt;/i&gt;, &lt;i&gt;Gyrothrix encephalarti&lt;/i&gt; from le","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"301-459"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.11","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38634878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 76
Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species. 球藻科球藻菌的系统发育与种界,以亚洲种为重点。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2019-12-16 DOI: 10.3767/persoonia.2020.44.05
L H Han, G Wu, E Horak, R E Halling, J Xu, E S T Ndolo, H Sato, N Fechner, Y P Sharma, Z L Yang

Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of Strobilomyces was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (RPB1 and RPB2); the translation elongation factor subunit 1-α (TEF1); and the mitochondrial cytochrome oxidase subunit 3 (COX3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. Strobilomyces and sect. Echinati. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of Strobilomyces. Our comparisons suggest that, there are a total of 31 distinct species, while S. sanmingensis, S. verruculosus, S. subnigricans, and S. zangii/S. areolatus, are synonyms of S. mirandus, S. giganteus, S. alpinus and S. seminudus, respectively. Eight new species, namely, S. albidus, S. anthracinus, S. calidus, S. cingulatus, S. densisquamosus, S. douformis, S. microreticulatus and S. pinophilus, are described. A dichotomous key to the Asian Strobilomyces species is provided.

联芽菌在地理上分布广泛,具有重要的生态功能。然而,由于发育变异和表型可塑性,很难在属内划分物种。为了阐明属内物种之间的系统发育关系,了解其物种多样性,特别是在亚洲,研究了来自五大洲(非洲、亚洲、澳大利亚、欧洲和北美/中美洲)的属资料。根据编码RNA聚合酶II (RPB1和RPB2)最大和第二大亚基的4个基因的核苷酸序列,重建了双胞菌的系统发育;翻译延伸因子亚基1-α (TEF1);线粒体细胞色素氧化酶亚基3 (COX3)。基于分子系统发育、形态特征、寄主树关联和地理分布模式的综合结果,支持了由两组组成的新分类,即Strobilomyces组和Echinati组。利用系谱一致性系统发生物种识别(GCPSR)方法,在亚洲至少可以划分出33个系统发生物种,所有这些物种都有形态学特征支持,还有5个系统发生物种有待描述。中国西南部的山区尤为特殊,至少有21种,很可能是物种多样化的中心。我们进一步将标本与25种球芽菌的模式标本进行了比较。我们的比较表明,共有31个不同的种,而S. sanmingensis、S. verruculosus、S. subnigricans和S. zangii/S。它们分别是S. mirandus、S. giganteus、S. alpinus和S. seminudus的同义词。本文介绍了8个新种,即:白刺棘虫、炭疽棘虫、calidus棘虫、cingulatus棘虫、densisquamsus棘虫、douformis棘虫、microreticulatus棘虫和pinophilus棘虫。提供了亚洲双孢菌种的二分类钥匙。
{"title":"Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.","authors":"L H Han,&nbsp;G Wu,&nbsp;E Horak,&nbsp;R E Halling,&nbsp;J Xu,&nbsp;E S T Ndolo,&nbsp;H Sato,&nbsp;N Fechner,&nbsp;Y P Sharma,&nbsp;Z L Yang","doi":"10.3767/persoonia.2020.44.05","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.05","url":null,"abstract":"<p><p><i>Strobilomyces</i> is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of <i>Strobilomyces</i> was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (<i>RPB</i>1 and <i>RPB</i>2); the translation elongation factor subunit 1-α (<i>TEF</i>1); and the mitochondrial cytochrome oxidase subunit 3 (<i>COX</i>3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. <i>Strobilomyces</i> and sect. <i>Echinati</i>. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of <i>Strobilomyces</i>. Our comparisons suggest that, there are a total of 31 distinct species, while <i>S. sanmingensis, S. verruculosus</i>, <i>S. subnigricans</i>, and <i>S. zangii</i>/<i>S. areolatus</i>, are synonyms of <i>S. mirandus</i>, <i>S. giganteus</i>, <i>S. alpinus</i> and <i>S. seminudus</i>, respectively. Eight new species, namely, <i>S. albidus</i>, <i>S. anthracinus</i>, <i>S. calidus</i>, <i>S. cingulatus</i>, <i>S. densisquamosus</i>, <i>S. douformis</i>, <i>S. microreticulatus</i> and <i>S. pinophilus</i>, are described. A dichotomous key to the Asian <i>Strobilomyces</i> species is provided.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"113-139"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.05","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
Fungal pathogens occurring on Orthopterida in Thailand. 泰国直翅目真菌病原体。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-02-19 DOI: 10.3767/persoonia.2020.44.06
D Thanakitpipattana, K Tasanathai, S Mongkolsamrit, A Khonsanit, S Lamlertthon, J J Luangsa-Ard

Two new fungal genera and six species occurring on insects in the orders Orthoptera and Phasmatodea (superorder Orthopterida) were discovered that are distributed across three families in the Hypocreales. Sixty-seven sequences generated in this study were used in a multi-locus phylogenetic study comprising SSU, LSU, TEF, RPB1 and RPB2 together with the nuclear intergenic region (IGR). These new taxa are introduced as Metarhizium gryllidicola, M. phasmatodeae, Neotorrubiella chinghridicola, Ophiocordyceps kobayasii, O. krachonicola and Petchia siamensis. Petchia siamensis shows resemblance to Cordyceps mantidicola by infecting egg cases (ootheca) of praying mantis (Mantidae) and having obovoid perithecial heads but differs in the size of its perithecia and ascospore shape. Two new species in the Metarhizium cluster belonging to the M. anisopliae complex are described that differ from known species with respect to phialide size, conidia and host. Neotorrubiella chinghridicola resembles Torrubiella in the absence of a stipe and can be distinguished by the production of whole ascospores, which are not commonly found in Torrubiella (except in Torrubiella hemipterigena, which produces multiseptate, whole ascospores). Ophiocordyceps krachonicola is pathogenic to mole crickets and shows resemblance to O. nigrella, O. ravenelii and O. barnesii in having darkly pigmented stromata. Ophiocordyceps kobayasii occurs on small crickets, and is the phylogenetic sister species of taxa in the 'sphecocephala' clade.

在直翅目和直翅目(超目)昆虫上发现了2个新属和6种真菌,分布于直翅目3科。本研究生成的67个序列被用于包括SSU、LSU、TEF、RPB1和RPB2以及核基因间区(IGR)在内的多位点系统发育研究。这些新分类群分别为灰绿绿僵菌(Metarhizium griyllidicola)、phasmatodeae、新恙螨(Neotorrubiella chinhtricola)、小叶虫草(Ophiocordyceps kobayasii)、O. krachonicola和Petchia siamensis。Petchia siamensis感染螳螂(Mantidae)的卵壳(卵囊),与虫草mantidicola相似,具有倒卵形的包皮头,但其包皮大小和子囊孢子形状不同。描述了绿僵菌群中属于绿僵菌复合体的两个新种,它们在菌体大小、分生孢子和寄主方面与已知种不同。中国新托鲁比氏菌与托鲁比氏菌相似,但没有柄,可以通过产生完整的子囊孢子来区分,而这在托鲁比氏菌中并不常见(除了半特里托鲁比氏菌,它产生多裂的完整子囊孢子)。克拉氏蛇虫草对蝼蛄具有致病性,在基质上具有深色色素,与黑孢虫、拉文氏虫和巴氏虫相似。小林蛇虫草发生在小蟋蟀身上,是球头类进化支系的姊妹种。
{"title":"Fungal pathogens occurring on <i>Orthopterida</i> in Thailand.","authors":"D Thanakitpipattana,&nbsp;K Tasanathai,&nbsp;S Mongkolsamrit,&nbsp;A Khonsanit,&nbsp;S Lamlertthon,&nbsp;J J Luangsa-Ard","doi":"10.3767/persoonia.2020.44.06","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.06","url":null,"abstract":"<p><p>Two new fungal genera and six species occurring on insects in the orders Orthoptera and Phasmatodea (superorder Orthopterida) were discovered that are distributed across three families in the <i>Hypocreales</i>. Sixty-seven sequences generated in this study were used in a multi-locus phylogenetic study comprising SSU, LSU, <i>TEF</i>, <i>RPB1</i> and <i>RPB2</i> together with the nuclear intergenic region (IGR). These new taxa are introduced as <i>Metarhizium gryllidicola</i>, <i>M. phasmatodeae</i>, <i>Neotorrubiella chinghridicola</i>, <i>Ophiocordyceps kobayasii</i>, <i>O. krachonicola</i> and <i>Petchia siamensis</i>. <i>Petchia siamensis</i> shows resemblance to <i>Cordyceps mantidicola</i> by infecting egg cases (ootheca) of praying mantis (Mantidae) and having obovoid perithecial heads but differs in the size of its perithecia and ascospore shape. Two new species in the <i>Metarhizium</i> cluster belonging to the <i>M. anisopliae</i> complex are described that differ from known species with respect to phialide size, conidia and host. <i>Neotorrubiella chinghridicola</i> resembles <i>Torrubiella</i> in the absence of a stipe and can be distinguished by the production of whole ascospores, which are not commonly found in <i>Torrubiella</i> (except in <i>Torrubiella hemipterigena</i>, which produces multiseptate, whole ascospores)<i>. Ophiocordyceps krachonicola</i> is pathogenic to mole crickets and shows resemblance to <i>O. nigrella</i>, <i>O. ravenelii</i> and <i>O. barnesii</i> in having darkly pigmented stromata. <i>Ophiocordyceps kobayasii</i> occurs on small crickets, and is the phylogenetic sister species of taxa in the 'sphecocephala' clade.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"140-160"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.06","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 18
Fenestelloid clades of the Cucurbitariaceae. 葫芦科的类Fenestelloid分支。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2019-05-27 DOI: 10.3767/persoonia.2020.44.01
W M Jaklitsch, H Voglmayr

Fresh collections and their ascospore and conidial isolates backed up by type studies and molecular phylogenetic analyses of a multigene matrix of partial nuSSU-, complete ITS, partial LSU rDNA, rpb2, tef1 and tub2 sequences were used to evaluate the boundaries and species composition of Fenestella and related genera of the Cucurbitariaceae. Eight species, of which five are new, are recognised in Fenestella s.str., 13 in Parafenestella with eight new species and two in the new genus Synfenestella with one new species. Cucurbitaria crataegi is combined in Fenestella, C. sorbi in Synfenestella, Fenestella faberi and Thyridium salicis in Parafenestella. Cucurbitaria subcaespitosa is distinct from C. sorbi and combined in Neocucurbitaria. Fenestella minor is a synonym of Valsa tetratrupha, which is combined in Parafenestella. Cucurbitaria marchica is synonymous with Parafenestella salicis, Fenestella bavarica with S. sorbi, F. macrospora with F. media, and P. mackenziei is synonymous with P. faberi, and the latter is lectotypified. Cucurbitaria sorbi, C. subcaespitosa and Fenestella macrospora are lecto- and epitypified, Cucurbitaria crataegi, Fenestella media, F. minor and Valsa tetratrupha are epitypified in order to stabilise the names in their phylogenetic positions. A neotype is proposed for Thyridium salicis. A determinative key to species is given. Asexual morphs of fenestelloid fungi are phoma-like and do not differ from those of other representatives of the Cucurbitariaceae. The phylogenetic structure of the fenestelloid clades is complex and can only be resolved at the species level by protein-coding genes, such as rpb2, tef1 and tub2. All fungal species studied here occur, as far as has been possible to determine, on members of Diaporthales, most frequently on asexual and sexual morphs of Cytospora.

通过对葫芦科Fenestella及相关属的部分nuSSU-、完整ITS、部分LSU rDNA、rpb2、tef1和tub2序列的分型研究和分子系统发育分析,对新鲜采集物及其子囊孢子和分生孢子分离物进行了分类和物种组成分析。在Fenestella s.str中发现了8种,其中5种是新发现的。新属(Synfenestella) 2个,新种1个。芜菁属在小窗属中有组合,山梨属在新窗属中有组合,费氏小窗属中有组合,水利胸属在副窗属中有组合。Cucurbitaria subcaespitosa不同于C. sorbi,并在新葫芦属中合并。小茴香属是Valsa tetratrupha的同义植物,合并在Parafenestella中。葫芦属马氏菌与水利氏菌同义,巴伐利亚氏菌与sorbi氏菌同义,大孢子菌与F. media, P.齐与P. faberi同义,后者是lectotypized。为了稳定它们在系统发育位置上的名称,我们对葫芦属植物、小仙人掌属植物和大孢子小仙人掌属植物进行了集约分类,对小仙人掌属植物、中等仙人掌属植物、小仙人掌属植物和小仙人掌属植物进行了集约分类。提出了一种水杨腺的新型。给出了物种的决定性关键。窗状真菌的无性形态是瘤状的,与葫芦科的其他代表没有什么不同。fenestellloid枝的系统发育结构是复杂的,只能在物种水平上通过蛋白质编码基因,如rpb2, tef1和tub2来解决。这里研究的所有真菌种类都发生在Diaporthales的成员上,最常见的是在Cytospora的无性和有性形态上。
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引用次数: 6
Phylogeny and character evolution in the Dacrymycetes, and systematics of Unilacrymaceae and Dacryonaemataceae fam. nov. Dacrymycetes 的系统发育和特征演化,以及 Unilacrymaceae 和 Dacryonaemataceae fam.
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-04-24 DOI: 10.3767/persoonia.2020.44.07
J C Zamora, S Ekman

We present a multilocus phylogeny of the class Dacrymycetes, based on data from the 18S, ITS, 28S, RPB1, RPB2, TEF-1α, 12S, and ATP6 DNA regions, with c. 90 species including the types of most currently accepted genera. A variety of methodological approaches was used to infer phylogenetic relationships among the Dacrymycetes, from a supermatrix strategy using maximum likelihood and Bayesian inference on a concatenated dataset, to coalescence-based calculations, such as quartet-based summary methods of independent single-locus trees, and Bayesian integration of single-locus trees into a species tree under the multispecies coalescent. We evaluate for the first time the taxonomic usefulness of some cytological phenotypic characters, i.e., vacuolar contents (vacuolar bodies and lipid bodies), number of nuclei of recently discharged basidiospores, and pigments, with especial emphasis on carotenoids. These characters, along with several others traditionally used for the taxonomy of this group (basidium shape, presence and morphology of clamp connections, morphology of the terminal cells of cortical/marginal hyphae, presence and degree of ramification of the hyphidia), are mapped on the resulting phylogenies and their evolution through the class Dacrymycetes discussed. Our analyses reveal five lineages that putatively represent five different families, four of which are accepted and named. Three out of these four lineages correspond to previously circumscribed and published families (Cerinomycetaceae, Dacrymycetaceae, and Unilacrymaceae), and one is proposed as the new family Dacryonaemataceae. Provisionally, only a single order, Dacrymycetales, is accepted within the class. Furthermore, the systematics of the two smallest families, Dacryonaemataceae and Unilacrymaceae, are investigated to the species level, using coalescence-based species delimitation on multilocus DNA data, and a detailed morphological study including morphometric analyses of the basidiospores. Three species are accepted in Dacryonaema, the type, Da. rufum, the newly combined Da. macnabbii (basionym Dacrymyces macnabbii), and a new species named Da. macrosporum. Two species are accepted in Unilacryma, the new U. bispora, and the type, U. unispora, the latter treated in a broad sense pending improved sampling across the Holarctic.

我们基于 18S、ITS、28S、RPB1、RPB2、TEF-1α、12S 和 ATP6 DNA 区域的数据,建立了 Dacrymycetes 类的多焦点系统发生,包括目前公认的大多数属的约 90 个物种。我们采用了多种方法来推断Dacrymycetes之间的系统发育关系,包括使用最大似然法和贝叶斯推断法的超级矩阵策略(supermatrix strategy)、基于聚合的计算(如基于独立单焦点树的四元组汇总法)以及在多物种聚合下将单焦点树整合为物种树的贝叶斯法。我们首次评估了一些细胞学表型特征(即空泡内容物(空泡体和脂体)、最近排出的基生孢子的核数目和色素,尤其是类胡萝卜素)在分类学上的作用。这些特征以及传统上用于该类生物分类的其他一些特征(基质的形状、夹子连接的存在和形态、皮层/边缘菌丝末端细胞的形态、菌丝的存在和分枝程度),都被绘制在所得到的系统进化图上,并讨论了它们在 Dacrymycetes 类中的进化过程。我们的分析揭示了可能代表五个不同科的五个系,其中四个系已被接受并命名。在这四个系中,有三个系对应于以前圈定并公布的科(Cerinomycetaceae、Dacrymycetaceae 和 Unilacrymaceae),还有一个系被提议为新科 Dacryonaemataceae。目前,该类中只接受了一个目,即 Dacrymycetales。此外,还对两个最小的科 Dacryonaemataceae 和 Unilacrymaceae 的系统学进行了种级研究,采用基于多焦点 DNA 数据的聚合法进行种的划分,并进行了详细的形态学研究,包括基生孢子的形态计量分析。macnabbii (basionym Dacrymyces macnabbii),以及一个名为 Da.Unilacryma 中的两个种被接受,即新的 U. bispora 和模式标本 U. unispora,后者被广义地对待,以待全北极地区取样的改进。
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引用次数: 0
Lactifluus (Russulaceae) diversity in Central America and the Caribbean: melting pot between realms. 中美洲和加勒比地区的乳香属(Russulaceae)多样性:不同领域之间的大熔炉。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-06-12 DOI: 10.3767/persoonia.2020.44.10
L Delgat, R Courtecuisse, E De Crop, F Hampe, T A Hofmann, C Manz, M Piepenbring, M Roy, A Verbeken

Species of the ectomycorrhizal genus Lactifluus, and often entire sections, are typically unique to a single continent. Given these biogeographic patterns, an interesting region to study their diversity is Central America and the Caribbean, since the region is closely connected to and often considered a part of the North American continent, but biogeographically belong to the Neotropical realm, and comprises several regions with different geologic histories. Based on a multi-gene phylogeny and morphological study, this study shows that Central America, Mexico and the Caribbean harbour at least 35 Lactifluus species, of which 33 were never reported outside of this region. It was found that species from the Caribbean generally show affinities to South American taxa, while species from the Central American mainland generally show affinities to Northern hemispheric taxa. We hypothesise that host specificity and/or climate play a crucial role in these different origins of diversity. Because of these different affinities, Caribbean islands harbour a completely different Lactifluus diversity than the Central American mainland. The majority of species occurring on the islands can be considered endemic to certain islands or island groups. In this paper, detailed morphological descriptions are given, with a focus on the unique diversity of the islands, and identification keys to all hitherto described Lactifluus species occurring in Central America and the Caribbean are provided. One new section, Lactifluus sect. Nebulosi, and three new species, Lactifluus guadeloupensis, Lactifluus lepus and Lactifluus marmoratus are described.

外生菌根属的物种,通常是整个部分,通常是单一大陆所特有的。考虑到这些生物地理模式,研究其多样性的一个有趣地区是中美洲和加勒比地区,因为该地区与北美大陆紧密相连,通常被认为是北美大陆的一部分,但生物地理上属于新热带地区,由几个具有不同地质历史的地区组成。基于多基因系统发育和形态学研究,本研究表明,中美洲、墨西哥和加勒比地区拥有至少35种Lactifluus,其中33种从未在该地区以外报道过。结果表明,来自加勒比海地区的物种与南美洲的类群有亲缘关系,而来自中美洲大陆的物种与北半球的类群有亲缘关系。我们假设宿主特异性和/或气候在这些不同的多样性起源中起着至关重要的作用。由于这些不同的亲缘关系,加勒比岛屿拥有与中美洲大陆完全不同的乳臭菌多样性。岛上出现的大多数物种可被认为是某些岛屿或岛群的特有物种。在本文中,给出了详细的形态学描述,重点是岛屿的独特多样性,并提供了迄今为止在中美洲和加勒比发生的所有描述的Lactifluus物种的识别钥匙。本文介绍了一新科——Nebulosi Lactifluus节和三新种——guadeloupensis Lactifluus、lepus Lactifluus和marmoratus Lactifluus。
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引用次数: 6
A morphological and phylogenetic evaluation of Marasmius sect. Globulares (Globulares-Sicci complex) with nine new taxa from the Neotropical Atlantic Forest. 新热带大西洋森林Globulares (Globulares- sicci复合体)9个新分类群的形态学和系统发育评价。
IF 9.1 1区 生物学 Q1 MYCOLOGY Pub Date : 2020-06-01 Epub Date: 2020-06-11 DOI: 10.3767/persoonia.2020.44.09
J J S Oliveira, J-M Moncalvo, S Margaritescu, M Capelari

The largest and most recently emended Marasmius sect. Globulares (Globulares-Sicci complex) has increased in number of species annually while its infrasectional organization remains inconclusive. During forays in remnants of the Atlantic Rainforest in Brazil, 24 taxa of Marasmius belonging to sect. Globulares were collected from which nine are herein proposed as new: Marasmius altoribeirensis, M. ambicellularis, M. hobbitii, M. luteoolivaceus, M. neotropicalis, M. pallidibrunneus, M. pseudoniveoaffinis, M. rhabarbarinoides and M. venatifolius. We took this opportunity to evaluate sect. Globulares sensu Antonín & Noordel. in particular, combining morphological examination and both single and multilocus phylogenetic analyses using LSU and ITS data, including Neotropical samples to a broader and more globally distributed sampling of over 200 strains. Three different approaches were developed in order to better use the genetic information via Bayesian and Maximum Likelihood analyses. The implementation of these approaches resulted in: i) the phylogenetic placement of the new and known taxa herein studied among the other taxa of a wide sampling of the section; ii) the reconstruction of improved phylogenetic trees presenting more strongly supported resolution especially from intermediate to deep nodes; iii) clearer evidence indicating that the series within sect. Sicci and sect. Globulares in the traditional concept are non-monophyletic by this more stringent evaluation; and iv) the existence of several monophyletic suprespecific groups equivalent to the stirpes of Singer - clusters of morphologically similar species. These two latter points corroborate with findings of previous studies implementing analyses with the entire genus. Based on these results, we proposed a new infrasectional classification elevating Singer's concept of stirpes to series. Thirteen new series, the emendation of three extant series and three subsections gathering these series based on the major clades are proposed.

最大和最近修订的Marasmius组。Globulares (Globulares- sicci复合体)的物种数量每年都在增加,但其次节组织仍然不确定。在对巴西大西洋热带雨林遗址的调查中,共收集到球状门Marasmius属24个分类群,其中9个为新分类群:altoribeiensis、M. ambicellularis、M. hobbitii、M. luteoolivaceus、M. neotropicalis、M. pallidibrunneus、M. pseudoniveoaffinis、M. rhabarbarinoides和M. venatifolius。我们借此机会评估了Globulares sensu Antonín & Noordel教派。特别是,结合形态学检查和单位点和多位点系统发育分析,使用LSU和ITS数据,包括新热带样本到更广泛和更全球分布的200多个菌株的样本。为了更好地利用遗传信息,通过贝叶斯和最大似然分析开发了三种不同的方法。这些方法的实施取得了以下结果:1)将本文研究的新的和已知的分类群与广泛取样的其他分类群进行系统发育定位;Ii)改进的系统发育树重建具有更强的支持分辨率,特别是从中间到深层节点;iii)更明确的证据表明,通过这种更严格的评估,传统概念中的Sicci节和Globulares节中的系列是非单系的;iv)存在几个单系超特异类群,相当于形态相似物种的辛格群的类群。后两点证实了先前对整个属进行分析的研究结果。基于这些结果,我们提出了一种新的下截面分类方法,将辛格的stirpes概念提升到级数。提出了13个新系列,对3个现存系列进行了修正,并根据主要演化支划分了3个分支。
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引用次数: 12
期刊
Persoonia
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