Pub Date : 2025-12-01Epub Date: 2025-11-07DOI: 10.3114/persoonia.2025.55.12
X E Xiao, M J Cheng, F Zheng, Y J Ao, J R Deng, P W Crous, C Jiao, H Y Li
Species of Fusarium and related fusarioid genera are widely distributed and commonly associated with diverse plant hosts, either as saprobes, endophytes, or pathogens. Although fusarioid fungi have been implicated in citrus diseases worldwide, their diversity and pathogenic potential on citrus in China remain poorly characterized. To investigate their species diversity, extensive field surveys were conducted in several citrus-producing regions of China between 2021 and 2024. Symptomatic tissues exhibiting dieback, necrosis, gummosis, canker, and wood decay were collected from twigs, branches, and trunks. Based on multi-locus phylogenetic analyses and morphological characteristics, 336 fusarioid isolates from eight provinces were assigned to six Fusarium species complexes and the genus Neocosmospora, comprising 21 known species (15 Fusarium spp. and six Neocosmospora spp.) and three novel species, namely F. gummosum, N. reticulatae and N. unshiu. Among the known species, 13 are reported from Citrus spp. for the first time, and two represent new records for China. Pathogenicity tests revealed that most fusarioid isolates were pathogenic to citrus branches, with N. unshiu and F. asiaticum being the most aggressive, inducing gummosis and cortex and xylem necrosis, consistent with symptoms observed in the field. Notably, N. unshiu was found to be the dominant pathogen causing citrus trunk canker in Hanzhong City, Shaanxi Province, where it is widely distributed and causes significant damage to citrus. To our knowledge, this study represents the first comprehensive investigation of fusarioid fungi associated with citrus branch diseases in China and provides a basis for future pathogen monitoring, disease prevention, and management strategies. Citation: Xiao XE, Cheng MJ, Zheng F, Ao YJ, Deng JR, Crous PW, Jiao C, Li HY (2025). Species of Fusarium and Neocosmospora associated with citrus branch diseases in China. Persoonia55: 477-525. doi: 10.3114/persoonia.2025.55.12.
{"title":"Species of <i>Fusarium</i> and <i>Neocosmospora</i> associated with citrus branch diseases in China.","authors":"X E Xiao, M J Cheng, F Zheng, Y J Ao, J R Deng, P W Crous, C Jiao, H Y Li","doi":"10.3114/persoonia.2025.55.12","DOIUrl":"10.3114/persoonia.2025.55.12","url":null,"abstract":"<p><p>Species of <i>Fusarium</i> and related fusarioid genera are widely distributed and commonly associated with diverse plant hosts, either as saprobes, endophytes, or pathogens. Although fusarioid fungi have been implicated in citrus diseases worldwide, their diversity and pathogenic potential on citrus in China remain poorly characterized. To investigate their species diversity, extensive field surveys were conducted in several citrus-producing regions of China between 2021 and 2024. Symptomatic tissues exhibiting dieback, necrosis, gummosis, canker, and wood decay were collected from twigs, branches, and trunks. Based on multi-locus phylogenetic analyses and morphological characteristics, 336 fusarioid isolates from eight provinces were assigned to six <i>Fusarium</i> species complexes and the genus <i>Neocosmospora</i>, comprising 21 known species (15 <i>Fusarium</i> spp. and six <i>Neocosmospora</i> spp.) and three novel species, namely <i>F. gummosum</i>, <i>N. reticulatae</i> and <i>N. unshiu</i>. Among the known species, 13 are reported from <i>Citrus</i> spp. for the first time, and two represent new records for China. Pathogenicity tests revealed that most fusarioid isolates were pathogenic to citrus branches, with <i>N. unshiu</i> and <i>F. asiaticum</i> being the most aggressive, inducing gummosis and cortex and xylem necrosis, consistent with symptoms observed in the field. Notably, <i>N. unshiu</i> was found to be the dominant pathogen causing citrus trunk canker in Hanzhong City, Shaanxi Province, where it is widely distributed and causes significant damage to citrus. To our knowledge, this study represents the first comprehensive investigation of fusarioid fungi associated with citrus branch diseases in China and provides a basis for future pathogen monitoring, disease prevention, and management strategies. <b>Citation:</b> Xiao XE, Cheng MJ, Zheng F, Ao YJ, Deng JR, Crous PW, Jiao C, Li HY (2025). Species of <i>Fusarium</i> and <i>Neocosmospora</i> associated with citrus branch diseases in China. <i>Persoonia</i> <b>55</b>: 477-525. doi: 10.3114/persoonia.2025.55.12.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"477-525"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798851/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971099","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-07-31DOI: 10.3114/persoonia.2025.55.04
J Koga, R G Thorn, E Langer
Clear distinction of the species of Hericium will aid in natural products discovery, medicinal applications, and breeding for commercial cultivation of these edible and medicinally valuable mushrooms. A phylogeny of Hericium species from North America, together with key taxa from Europe, was accomplished using sequence data from the nuclear ribosomal internal transcribed spacer (ITS) region and adjacent large ribosomal subunit (LSU), translation elongation factor 1-alpha (TEF-1α), and RNA polymerase second largest subunit (RPB2) gene sequences. Compared to previous unresolved phylogenies based solely on ITS data, the species of Hericium were resolved as monophyletic groups, including the type species H. coralloides (synonyms H. flagellum and H. ramosum; Europe and North America), H. alpestre (Europe to central Asia), H. americanum (eastern North America), H. abietis (western North America), H. cirrhatum (Europe and boreal-montane North America), H. erinaceus (Europe), two recently described species of the H. erinaceus species complex, H. asiaticum (Eastern Asia) and H. carolinense (eastern United States), and a third new species in this complex from western North America, H. oregonense, described herein. All taxa, including the newly described species within the H. erinaceus complex, were strongly supported in maximum likelihood analyses. Citation: Koga J, Thorn RG, Langer E (2025). A multilocus phylogeny of Hericium (Hericiaceae, Russulales). Persoonia55: 141-157. doi: 10.3114/persoonia.2025.55.04.
{"title":"A multilocus phylogeny of <i>Hericium</i> (<i>Hericiaceae, Russulales</i>).","authors":"J Koga, R G Thorn, E Langer","doi":"10.3114/persoonia.2025.55.04","DOIUrl":"10.3114/persoonia.2025.55.04","url":null,"abstract":"<p><p>Clear distinction of the species of <i>Hericium</i> will aid in natural products discovery, medicinal applications, and breeding for commercial cultivation of these edible and medicinally valuable mushrooms. A phylogeny of <i>Hericium</i> species from North America, together with key taxa from Europe, was accomplished using sequence data from the nuclear ribosomal internal transcribed spacer (ITS) region and adjacent large ribosomal subunit (LSU), translation elongation factor 1-alpha (<i>TEF-1α</i>), and RNA polymerase second largest subunit (<i>RPB2</i>) gene sequences. Compared to previous unresolved phylogenies based solely on ITS data, the species of <i>Hericium</i> were resolved as monophyletic groups, including the type species <i>H. coralloides</i> (synonyms <i>H. flagellum</i> and <i>H. ramosum</i>; Europe and North America), <i>H. alpestre</i> (Europe to central Asia), <i>H. americanum</i> (eastern North America), <i>H. abietis</i> (western North America), <i>H. cirrhatum</i> (Europe and boreal-montane North America), <i>H. erinaceus</i> (Europe), two recently described species of the <i>H. erinaceus</i> species complex, <i>H. asiaticum</i> (Eastern Asia) and <i>H. carolinense</i> (eastern United States), and a third new species in this complex from western North America, <i>H. oregonense</i>, described herein. All taxa, including the newly described species within the <i>H. erinaceus</i> complex, were strongly supported in maximum likelihood analyses. <b>Citation:</b> Koga J, Thorn RG, Langer E (2025). A multilocus phylogeny of <i>Hericium</i> (<i>Hericiaceae, Russulales</i>). <i>Persoonia</i> <b>55</b>: 141-157. doi: 10.3114/persoonia.2025.55.04.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"141-157"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798842/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-11-07DOI: 10.3114/persoonia.2025.55.13
P R Johnston, D Park
A paper by Johnston and others published in 2019 provided three Leotiomycetes-wide phylogenies, one based on genomes, one a multigene phylogeny with up to 15 genes, and one based on ITS sequences. The genomic and multigene phylogenies provided a backbone phylogeny for the class that has proven to be robust, providing a phylogenetically stable concept for the large order Helotiales. However, a lack of genomic data for the clades outside of Helotiales, towards the root of the tree, meant that relationships in this part of the tree remained somewhat poorly resolved. The ITS phylogeny, although phylogenetically much less informative, provided a wider taxon coverage, focussing on the type species of genera not otherwise treated for which ITS data was available. This paper treats genera listed as Leotiomycetes in the Outline of Fungi 2024. It incorporates newly available DNA sequence data and taxonomic changes, especially for genera, families, and orders published since 2019, into the 2019 multigene and ITS analyses. The genomic phylogeny is not updated. Citation: Johnston PR, Park D (2025). An updated multigene phylogeny of Leotiomycetes. Persoonia55: 527-566. doi: 10.3114/persoonia.2025.55.13.
约翰斯顿等人在2019年发表的一篇论文提供了三种全利多菌的系统发育,一种是基于基因组的,一种是包含多达15个基因的多基因系统发育,一种是基于ITS序列的。基因组学和多基因系统发育为该纲的主干系统发育提供了一个已被证明是稳健的系统发育,为大目Helotiales提供了一个系统发育稳定的概念。然而,缺少Helotiales以外的进化枝的基因组数据,也就是树的根部,这意味着树的这一部分的关系仍然没有得到很好的解决。ITS系统发育虽然在系统发育上提供的信息少得多,但提供了更广泛的分类单元覆盖范围,重点关注了ITS数据未被处理的属的模式种。本文研究了《真菌概论2024》中列示的利多菌属。它将新获得的DNA序列数据和分类学变化,特别是自2019年以来发表的属、科和目,纳入2019年的多基因和ITS分析。基因组系统发育没有更新。引用本文:Johnston PR, Park D(2025)。利多菌的多基因系统发育新进展。人物55:527-566。doi: 10.3114 / persoonia.2025.55.13。
{"title":"An updated multigene phylogeny of <i>Leotiomycetes</i>.","authors":"P R Johnston, D Park","doi":"10.3114/persoonia.2025.55.13","DOIUrl":"10.3114/persoonia.2025.55.13","url":null,"abstract":"<p><p>A paper by Johnston and others published in 2019 provided three <i>Leotiomycetes-</i>wide phylogenies, one based on genomes, one a multigene phylogeny with up to 15 genes, and one based on ITS sequences. The genomic and multigene phylogenies provided a backbone phylogeny for the class that has proven to be robust, providing a phylogenetically stable concept for the large order <i>Helotiales</i>. However, a lack of genomic data for the clades outside of <i>Helotiales</i>, towards the root of the tree, meant that relationships in this part of the tree remained somewhat poorly resolved. The ITS phylogeny, although phylogenetically much less informative, provided a wider taxon coverage, focussing on the type species of genera not otherwise treated for which ITS data was available. This paper treats genera listed as <i>Leotiomycetes</i> in the Outline of Fungi 2024. It incorporates newly available DNA sequence data and taxonomic changes, especially for genera, families, and orders published since 2019, into the 2019 multigene and ITS analyses. The genomic phylogeny is not updated. <b>Citation:</b> Johnston PR, Park D (2025). An updated multigene phylogeny of <i>Leotiomycetes</i>. <i>Persoonia</i> <b>55</b>: 527-566. doi: 10.3114/persoonia.2025.55.13.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"527-566"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12799595/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145990382","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-06DOI: 10.3114/persoonia.2025.55.09
S Sarawi, K Reschke, A Jagora, N S Yorou, P Le Pogam, M Piepenbring
We investigated Lepiota species from Benin and reference species from Europe based on fieldwork, light microscopy, and the analysis of DNA sequence data. As a result, thirteen Lepiota species from Benin are described as new to science, whereas only one previously described species, L. albogranulosa, was found. An identification key to these species is provided. The taxonomical results are supported by a comprehensive multilocus phylogeny based on ITS, LSU, and RPB2 sequences. In addition, the occurrence of amatoxins in basidiomata of Lepiota spp. was examined, in order to detect toxic mushrooms and for chemotaxonomic conclusions for the genus Lepiota in general. To this end, an UHPLC-HRMS2 analysis process was applied and molecular networks were generated to obtain an overview of the chemical diversity encompassed by 46 Lepiota species, with particular emphasis on their amatoxin content, resulting in the first report of a Lepiota species containing amatoxin for Benin. The annotation coverage was extended using DEREPLICATOR and taxonomically informed metabolite annotation (TIMA). Birnbaumins were discovered in several species as well as other chemical features of possible chemotaxonomic interest. This study extends the knowledge about diversity, amatoxin occurrence, and possible chemotaxonomic markers in the genus Lepiota. Citation: Sarawi S, Reschke K, Jagora A, Yorou NS, Le Pogam P, Piepenbring M (2025). Hidden gems of Benin: Unravelling the diversity of Lepiota spp. through phylogenetic, morphological, and chemotaxonomic exploration. Persoonia55: 313-360. doi: 10.3114/persoonia.2025.55.09.
通过野外调查、光镜观察和DNA序列分析,对来自贝宁的Lepiota种和来自欧洲的参考种进行了研究。结果,来自贝宁的13个Lepiota物种被描述为科学上的新物种,而只有一个先前描述的物种,L. albogranulosa被发现。提供了识别这些物种的关键。分类结果得到了基于ITS、LSU和RPB2序列的综合多位点系统发育的支持。此外,为了检测毒菇,并为该属的化学分类提供结论,本文还对其担子菌中是否含有amatoxins进行了研究。为此,应用uhplc - hrrms2分析过程,并生成分子网络,以获得46种Lepiota物种所包含的化学多样性概况,特别强调其阿曲霉毒素含量,从而在贝宁首次报道了含有阿曲霉毒素的Lepiota物种。使用DEREPLICATOR和分类信息代谢物注释(TIMA)扩展了注释覆盖范围。在几个物种中发现了Birnbaumins以及其他可能的化学分类学兴趣的化学特征。本研究扩展了对Lepiota属的多样性、amatoxin的发生以及可能的化学分类标记的认识。引用本文:Sarawi S, Reschke K, Jagora A, Yorou NS, Le Pogam P, Piepenbring M(2025)。贝宁隐藏的宝石:通过系统发育、形态和化学分类探索揭示Lepiota的多样性。人:313-360。doi: 10.3114 / persoonia.2025.55.09。
{"title":"Hidden gems of Benin: Unravelling the diversity of <i>Lepiota</i> spp. through phylogenetic, morphological, and chemotaxonomic exploration.","authors":"S Sarawi, K Reschke, A Jagora, N S Yorou, P Le Pogam, M Piepenbring","doi":"10.3114/persoonia.2025.55.09","DOIUrl":"10.3114/persoonia.2025.55.09","url":null,"abstract":"<p><p>We investigated <i>Lepiota</i> species from Benin and reference species from Europe based on fieldwork, light microscopy, and the analysis of DNA sequence data. As a result, thirteen <i>Lepiota</i> species from Benin are described as new to science, whereas only one previously described species, <i>L. albogranulosa</i>, was found. An identification key to these species is provided. The taxonomical results are supported by a comprehensive multilocus phylogeny based on ITS, LSU, and <i>RPB2</i> sequences. In addition, the occurrence of amatoxins in basidiomata of <i>Lepiota</i> spp. was examined, in order to detect toxic mushrooms and for chemotaxonomic conclusions for the genus <i>Lepiota</i> in general. To this end, an UHPLC-HRMS<sup>2</sup> analysis process was applied and molecular networks were generated to obtain an overview of the chemical diversity encompassed by 46 <i>Lepiota</i> species, with particular emphasis on their amatoxin content, resulting in the first report of a <i>Lepiota</i> species containing amatoxin for Benin. The annotation coverage was extended using DEREPLICATOR and taxonomically informed metabolite annotation (TIMA). Birnbaumins were discovered in several species as well as other chemical features of possible chemotaxonomic interest. This study extends the knowledge about diversity, amatoxin occurrence, and possible chemotaxonomic markers in the genus <i>Lepiota</i>. <b>Citation:</b> Sarawi S, Reschke K, Jagora A, Yorou NS, Le Pogam P, Piepenbring M (2025). Hidden gems of Benin: Unravelling the diversity of <i>Lepiota</i> spp. through phylogenetic, morphological, and chemotaxonomic exploration. <i>Persoonia</i> <b>55</b>: 313-360. doi: 10.3114/persoonia.2025.55.09.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"313-360"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798316/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-07-31DOI: 10.3114/persoonia.2025.55.02
B Lemmond, G Bonito, R Healy, J Van Wyk, H A Dawson, C R Noffsinger, R Stephens, A Sow, J M Trappe, T Orihara, P Mleczko, V Kaounas, M E Smith
The family Morchellaceae contains four truffle-forming genera: Fischerula, Imaia, Kalapuya, and Leucangium. In North America, some Imaia, Kalapuya, and Leucangium species are highly regarded gourmet edible fungi. In this study, we address longstanding questions about the evolution, systematics, and trophic mode of these fungal genera. We used high-throughput sequencing and a custom genome assembly pipeline to sequence and assemble 41 new genomes of epigeous and hypogeous Morchellaceae genera and outgroup taxa from the sister family Discinaceae. Phylogenomic reconstructions based on high-quality de novo genomes and published reference genomes support a single transition from epigeous to hypogeous habit within the Morchellaceae. These results are corroborated by phylogenetic evidence from LSU, tef1, and rpb2 with a larger dataset of specimens and publicly available sequences. We also provide direct morphological and molecular evidence that one species of Leucangium from North America forms ectomycorrhizas on Pseudotsuga menziesii in a natural habitat. Stable isotope analysis further supports the hypothesis that other species of truffle-forming Morchellaceae also obtain carbon via ectomycorrhizal symbiosis. Phylogenetic and morphological analysis supports the description of two new species and one new combination of Leucangium as well as one new species and one new combination of Imaia from North America. We also discuss additional, undescribed diversity detected in our phylogenetic analyses of these genera derived from fungarium specimens, mycophagous mammal scat samples, and other environmental samples. Citation: Lemmond B, Bonito G, Healy R, Van Wyk J, Dawson HA, Noffsinger CR, Stephens R, Sow A, Trappe JM, Orihara T, Mleczko P, Kaounas V, Smith ME (2025). Phylogenomics, trophic ecology, and systematics of the truffle-forming Morchellaceae. Persoonia55: 59-91. doi: 10.3114/persoonia.2025.55.02.
羊肚菌科包含四个形成松露的属:Fischerula, Imaia, Kalapuya和Leucangium。在北美,一些Imaia, Kalapuya和Leucangium物种被高度重视的美食食用菌。在这项研究中,我们解决了关于这些真菌属的进化、分类学和营养模式的长期问题。利用高通量测序和定制的基因组组装管道,对羊肚菌科(Morchellaceae)亲缘属和外群分类群的41个新基因组进行了测序和组装。基于高质量从头基因组和已发表的参考基因组的系统基因组重建支持羊肚菌科从上生习性到下生习性的单一过渡。这些结果被LSU、tef1和rpb2的系统发育证据与更大的标本数据集和公开可用的序列所证实。我们还提供了来自北美的一种Leucangium在自然栖息地上形成外生菌根的直接形态学和分子证据。稳定同位素分析进一步支持了其他松露形成菌科物种也通过外生菌根共生获得碳的假设。系统发育和形态分析支持了在北美发现的Leucangium属2个新种和1个新组合以及Imaia属1个新种和1个新组合。我们还讨论了在真菌标本、真菌哺乳动物粪便样本和其他环境样本中检测到的这些属的系统发育分析中发现的其他未描述的多样性。引用本文:Lemmond B, Bonito G, Healy R, Van Wyk J, Dawson HA, Noffsinger CR, Stephens R, Sow A, Trappe JM, Orihara T, Mleczko P, Kaounas V, Smith ME(2025)。形成松露的羊肚菌科的系统基因组学、营养生态学和系统学。《人物》55:59-91。doi: 10.3114 / persoonia.2025.55.02。
{"title":"Phylogenomics, trophic ecology, and systematics of the truffle-forming <i>Morchellaceae</i>.","authors":"B Lemmond, G Bonito, R Healy, J Van Wyk, H A Dawson, C R Noffsinger, R Stephens, A Sow, J M Trappe, T Orihara, P Mleczko, V Kaounas, M E Smith","doi":"10.3114/persoonia.2025.55.02","DOIUrl":"10.3114/persoonia.2025.55.02","url":null,"abstract":"<p><p>The family <i>Morchellaceae</i> contains four truffle-forming genera: <i>Fischerula</i>, <i>Imaia</i>, <i>Kalapuya</i>, and <i>Leucangium</i>. In North America, some <i>Imaia</i>, <i>Kalapuya</i>, and <i>Leucangium</i> species are highly regarded gourmet edible fungi. In this study, we address longstanding questions about the evolution, systematics, and trophic mode of these fungal genera. We used high-throughput sequencing and a custom genome assembly pipeline to sequence and assemble 41 new genomes of epigeous and hypogeous <i>Morchellaceae</i> genera and outgroup taxa from the sister family <i>Discinaceae</i>. Phylogenomic reconstructions based on high-quality <i>de novo</i> genomes and published reference genomes support a single transition from epigeous to hypogeous habit within the <i>Morchellaceae</i>. These results are corroborated by phylogenetic evidence from LSU, <i>tef1</i>, and <i>rpb</i>2 with a larger dataset of specimens and publicly available sequences. We also provide direct morphological and molecular evidence that one species of <i>Leucangium</i> from North America forms ectomycorrhizas on <i>Pseudotsuga menziesii</i> in a natural habitat. Stable isotope analysis further supports the hypothesis that other species of truffle-forming <i>Morchellaceae</i> also obtain carbon via ectomycorrhizal symbiosis. Phylogenetic and morphological analysis supports the description of two new species and one new combination of <i>Leucangium</i> as well as one new species and one new combination of <i>Imaia</i> from North America. We also discuss additional, undescribed diversity detected in our phylogenetic analyses of these genera derived from fungarium specimens, mycophagous mammal scat samples, and other environmental samples. <b>Citation:</b> Lemmond B, Bonito G, Healy R, Van Wyk J, Dawson HA, Noffsinger CR, Stephens R, Sow A, Trappe JM, Orihara T, Mleczko P, Kaounas V, Smith ME (2025). Phylogenomics, trophic ecology, and systematics of the truffle-forming <i>Morchellaceae</i>. <i>Persoonia</i> <b>55</b>: 59-91. doi: 10.3114/persoonia.2025.55.02.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"59-91"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798847/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-09-16DOI: 10.3114/persoonia.2025.55.06
C E Ballesteros-Aguirre, T Sanjuan, V Ramírez-Cruz, A R Villalobos-Arámbula, M Vásquez-Bolaños, L Guzmán-Dávalos
The myrmecophilous hirsutelloid fungi of the Ophiocordyceps unilateralis complex are common in tropical forests around the world. They are known as zombie-ant fungi because they manipulate the behaviour of ants, since infected ants are forced to move to specific sites in the forest, with optimal environmental conditions for the development of the fungus sporocarp or sporome and the release of the spores. Once there, the ants grab to the substrate with their mandibles, die, and their body becomes a source of nutrients for the fungus. Most of the species of the O. unilateralis complex have been described from the Neotropics and the East and Southeast Asia. However, it is likely that there are still many unknown species due to the diversity of their hosts and different specific associations. In this study, we describe six new species of the O. unilateralis complex from western Mexico: O. camponoti-striati, O. cephalotiphila, O. deltoroi, O. haraveriensis, O. jaliscana, and O. pseudocamponoti-atricipis, based on morphological characters, phylogenetic analyses of DNA sequences (18S, TEF1, RPB1, and RPB2), and ecological data. We found the following host associations: one fungus - one ant, two fungi - one ant, and one fungus - two ants. Furthermore, we confirmed the host species of the ant genera Camponotus and Colobopsis (Formicinae) based on morphological characters and COI sequences, but we also found two species of Cephalotes (Myrmicinae) susceptible to fungal attack, challenging the paradigm that the O. unilateralis complex is a specific parasite of Camponotini (Formicinae) ants. This study provides insights into the evolution and host range of the Ophiocordyceps unilateralis complex in Mexico. Citation: Ballesteros-Aguirre CE, Sanjuan T, Ramírez-Cruz V, Villalobos-Arámbula AR, Vásquez-Bolaños M, Guzmán-Dávalos L (2025). Zombie-ant fungi from western Mexico: six new species in the Ophiocordyceps unilateralis complex (Hypocreales: Ascomycota) and a new host association with Cephalotes ants. Persoonia55: 203-237. doi: 10.3114/persoonia.2025.55.06.
{"title":"Zombie-ant fungi from western Mexico: six new species in the <i>Ophiocordyceps unilateralis</i> complex (<i>Hypocreales</i>: <i>Ascomycota</i>) and a new host association with <i>Cephalotes</i> ants.","authors":"C E Ballesteros-Aguirre, T Sanjuan, V Ramírez-Cruz, A R Villalobos-Arámbula, M Vásquez-Bolaños, L Guzmán-Dávalos","doi":"10.3114/persoonia.2025.55.06","DOIUrl":"10.3114/persoonia.2025.55.06","url":null,"abstract":"<p><p>The myrmecophilous hirsutelloid fungi of the <i>Ophiocordyceps unilateralis</i> complex are common in tropical forests around the world. They are known as zombie-ant fungi because they manipulate the behaviour of ants, since infected ants are forced to move to specific sites in the forest, with optimal environmental conditions for the development of the fungus sporocarp or sporome and the release of the spores. Once there, the ants grab to the substrate with their mandibles, die, and their body becomes a source of nutrients for the fungus. Most of the species of the <i>O. unilateralis</i> complex have been described from the Neotropics and the East and Southeast Asia. However, it is likely that there are still many unknown species due to the diversity of their hosts and different specific associations. In this study, we describe six new species of the <i>O. unilateralis</i> complex from western Mexico: <i>O. camponoti-striati</i>, <i>O. cephalotiphila</i>, <i>O. deltoroi</i>, <i>O. haraveriensis</i>, <i>O. jaliscana</i>, and <i>O. pseudocamponoti-atricipis</i>, based on morphological characters, phylogenetic analyses of DNA sequences (18S, <i>TEF1</i>, <i>RPB1</i>, and <i>RPB2</i>), and ecological data. We found the following host associations: one fungus - one ant, two fungi - one ant, and one fungus - two ants. Furthermore, we confirmed the host species of the ant genera <i>Camponotus</i> and <i>Colobopsis</i> (<i>Formicinae</i>) based on morphological characters and <i>COI</i> sequences, but we also found two species of <i>Cephalotes</i> (<i>Myrmicinae</i>) susceptible to fungal attack, challenging the paradigm that the <i>O. unilateralis</i> complex is a specific parasite of <i>Camponotini</i> (<i>Formicinae</i>) ants. This study provides insights into the evolution and host range of the <i>Ophiocordyceps unilateralis</i> complex in Mexico. <b>Citation:</b> Ballesteros-Aguirre CE, Sanjuan T, Ramírez-Cruz V, Villalobos-Arámbula AR, Vásquez-Bolaños M, Guzmán-Dávalos L (2025). Zombie-ant fungi from western Mexico: six new species in the <i>Ophiocordyceps unilateralis</i> complex (<i>Hypocreales</i>: <i>Ascomycota</i>) and a new host association with <i>Cephalotes</i> ants. <i>Persoonia</i> <b>55</b>: 203-237. doi: 10.3114/persoonia.2025.55.06.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"203-237"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798844/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971076","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-22DOI: 10.3114/persoonia.2025.55.10
N Jiang, H Voglmayr, J R Li, H Xue, Y Li, P W Crous
Cytospora is a widespread fungal genus that causes canker diseases in woody plants worldwide. Recent studies have clarified the classification of this genus by combing phylogenetic analysis and morphological characteristics. However, the species diversity of Cytospora in the high-altitude forests of the Xizang (Tibet) Autonomous Region in China has not been systematically studied. In the present study, 136 isolates were collected from cankered branches of woody plants in Xizang and identified using multigene phylogenetics, culture characteristics and morphology. As a result of these analyses, the genus was divided into 10 species complexes (Beilinensis SC, Chrysosperma SC, Euonymicola SC, Japonica SC, Kantschavelii SC, Leucostoma SC, Pruinosa SC, Ribis SC, Sacchari SC and Viticola SC) and 12 singletons. In total 50 species were identified, of which 23 were found to be new to science. This study highlights the species diversity of forest pathogens in Xizang, providing valuable information for future disease management practices. Citation: Jiang N, Voglmayr H, Li JR, Xue H, Li Y, Crous PW (2025). Species diversity of Cytospora associated with forest canker diseases in Xizang (Tibet), China. Persoonia55: 361-438. doi: 10.3114/persoonia.2025.55.10.
{"title":"Species diversity of <i>Cytospora</i> associated with forest canker diseases in Xizang (Tibet), China.","authors":"N Jiang, H Voglmayr, J R Li, H Xue, Y Li, P W Crous","doi":"10.3114/persoonia.2025.55.10","DOIUrl":"10.3114/persoonia.2025.55.10","url":null,"abstract":"<p><p><i>Cytospora</i> is a widespread fungal genus that causes canker diseases in woody plants worldwide. Recent studies have clarified the classification of this genus by combing phylogenetic analysis and morphological characteristics. However, the species diversity of <i>Cytospora</i> in the high-altitude forests of the Xizang (Tibet) Autonomous Region in China has not been systematically studied. In the present study, 136 isolates were collected from cankered branches of woody plants in Xizang and identified using multigene phylogenetics, culture characteristics and morphology. As a result of these analyses, the genus was divided into 10 species complexes (<i>Beilinensis</i> SC, <i>Chrysosperma</i> SC, <i>Euonymicola</i> SC, <i>Japonica</i> SC, <i>Kantschavelii</i> SC, <i>Leucostoma</i> SC, <i>Pruinosa</i> SC, <i>Ribis</i> SC, <i>Sacchari</i> SC and <i>Viticola</i> SC) and 12 singletons. In total 50 species were identified, of which 23 were found to be new to science. This study highlights the species diversity of forest pathogens in Xizang, providing valuable information for future disease management practices. <b>Citation:</b> Jiang N, Voglmayr H, Li JR, Xue H, Li Y, Crous PW (2025). Species diversity of <i>Cytospora</i> associated with forest canker diseases in Xizang (Tibet), China. <i>Persoonia</i> <b>55</b>: 361-438. doi: 10.3114/persoonia.2025.55.10.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"361-438"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798850/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971083","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-24DOI: 10.3114/persoonia.2025.55.11
R de Carolis, G Stoppiello, B Turchetti, G Bartolomeo, C Coleine, M Tetriach, L Selbmann, L Muggia
Lichen thalli are niches for microorganisms, including microfungi, microalgae and non-photosynthetic bacteria, which form communities of variable composition, often shaped by the environmental conditions under which the lichen thalli develop. In Antarctica lichens represent an important group of organisms characterized by a high percentage of endemism, which have specialized to grow on rocks, as the predominant substrate for colonization. Here, Antarctic epilithic thalli of five endemic and three cosmopolitan lichen species have been investigated for their potential role as fungal species hotspots. The culturable fraction of the Antarctic lichen-associated fungi and algae was uncovered with the aim to isolate as many species as possible and find whether taxa are strictly connected to the Antarctic environment or are cosmopolitan species that particularly associate to lichens in harsh, extreme environments. Over 300 fungal and algal inocula grew in culture, among which we recognized species previously described, as well as five new fungal species in Ascomycota and Basidiomycota, namely: Petrophila complexa sp. nov., Dactylospora endolichenica sp. nov., Knufia elegansiana sp. nov., Pseudeurotium lichenicum sp. nov., and Kurtzmanomyces lichenum sp. nov. These species seem to select lichens as their preferred niche, both in Antarctica and worldwide. Indeed, the major representatives of the lichen mycobiota are fungi that do not show any specificity toward a particular lichen host species, rather toward the lichen thallus in general, as a structure in which spores, yeast cells and mycelia fragments thrive or rest. Particularly in Antarctica, where conditions on rock surfaces are far more selective than elsewhere, lichen thalli would be even more exploited as suitable niches by other fungi for their evolution and diversification. Citation: de Carolis R, Stoppiello G, Turchetti B, Bartolomeo G, Coleine C, Tetriach M, Selbmann L, Muggia L (2025). Cryptic associated fungi and algae isolated from Antarctic epilithic lichens of the Victoria Land and the description of five new fungal species. Persoonia55: 439-476. doi: 10.3114/persoonia.2025.55.11.
{"title":"Cryptic associated fungi and algae isolated from Antarctic epilithic lichens of the Victoria Land and the description of five new fungal species.","authors":"R de Carolis, G Stoppiello, B Turchetti, G Bartolomeo, C Coleine, M Tetriach, L Selbmann, L Muggia","doi":"10.3114/persoonia.2025.55.11","DOIUrl":"10.3114/persoonia.2025.55.11","url":null,"abstract":"<p><p>Lichen thalli are niches for microorganisms, including microfungi, microalgae and non-photosynthetic bacteria, which form communities of variable composition, often shaped by the environmental conditions under which the lichen thalli develop. In Antarctica lichens represent an important group of organisms characterized by a high percentage of endemism, which have specialized to grow on rocks, as the predominant substrate for colonization. Here, Antarctic epilithic thalli of five endemic and three cosmopolitan lichen species have been investigated for their potential role as fungal species hotspots. The culturable fraction of the Antarctic lichen-associated fungi and algae was uncovered with the aim to isolate as many species as possible and find whether taxa are strictly connected to the Antarctic environment or are cosmopolitan species that particularly associate to lichens in harsh, extreme environments. Over 300 fungal and algal inocula grew in culture, among which we recognized species previously described, as well as five new fungal species in <i>Ascomycota</i> and <i>Basidiomycota</i>, namely: <i>Petrophila complexa sp. nov</i>., <i>Dactylospora endolichenica sp. nov</i>., <i>Knufia elegansiana sp. nov</i>., <i>Pseudeurotium lichenicum sp. nov</i>., and <i>Kurtzmanomyces lichenum sp. nov</i>. These species seem to select lichens as their preferred niche, both in Antarctica and worldwide. Indeed, the major representatives of the lichen mycobiota are fungi that do not show any specificity toward a particular lichen host species, rather toward the lichen thallus in general, as a structure in which spores, yeast cells and mycelia fragments thrive or rest. Particularly in Antarctica, where conditions on rock surfaces are far more selective than elsewhere, lichen thalli would be even more exploited as suitable niches by other fungi for their evolution and diversification. <b>Citation:</b> de Carolis R, Stoppiello G, Turchetti B, Bartolomeo G, Coleine C, Tetriach M, Selbmann L, Muggia L (2025). Cryptic associated fungi and algae isolated from Antarctic epilithic lichens of the Victoria Land and the description of five new fungal species. <i>Persoonia</i> <b>55</b>: 439-476. doi: 10.3114/persoonia.2025.55.11.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"439-476"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798318/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-07-16DOI: 10.3114/persoonia.2025.55.01
G Schmidt-Stohn, J-M Bellanger, T E Brandrud, A Bidaud, B Oertel, G Saar, J Ballarà, X Carteret, J D D Reyes García, M Dondl, S Ploch, M Thines, B Dima
In this study, we describe four species of Cortinarius subgen. Telamonia sect. Bovini as new to science: Cortinarius acutipes, C. cepiformis, C. schistaceus and C. sericeovelatus. We also provide updated descriptions and synonymies for several known species in the section, including C. pachypus (formerly C. terribilis and C. pseudobulbosus), C. sordescens (neotypified here), C. turgidulus and C. urbis-veteris, as well as for C. hillieri, here supported as a genuine Bovini member. In addition, through DNA sequencing of its holotype, we fix here the interpretation of C. aprinus, the iconic member of a difficult group of large, fleshy, grey brown Telamonia species often referred to as Aprini or Sordescentes. We also update the taxonomy of C. diffractosuavis (sect. Sordescentes) and C. testaceomicaceus (sect. Exsulares), to yield a most comprehensive overview of phylogenetically supported "bovinoid" species from deciduous forests on calcareous soils of Europe. The habitat and distribution of all treated species are presented, and a tentative identification key is also proposed. Citation: Schmidt-Stohn G, Bellanger J-M, Brandrud TE, Bidaud A, Oertel B, Saar G, Ballarà J, Carteret X, Reyes García JdD, Dondl B, Ploch S, Thines M, Dima B (2025). The big brown Telamonia unlocked: four new species in Cortinarius section Bovini (Agaricales, Basidiomycota) and a revised taxonomy of bovinoid Cortinarii. Persoonia55: 1-57. doi: 10.3114/persoonia.2025.55.01.
在这项研究中,我们描述了四种海螺亚属。新发现的牛蠓科:长尾蠓、头形蠓、血吸虫和细尾蠓。我们还提供了几个已知物种的最新描述和同义词,包括C. pachypus(以前的C. terribilis和C. pseudobulbosus), C. sordescens(此处新分型),C. turgidulus和C. urbisi -veteris,以及C. hillieri,这里被支持为真正的Bovini成员。此外,通过对其全型的DNA测序,我们在这里确定了C. aprinus的解释,C. aprinus是一个大的、肉质的、灰棕色的Telamonia物种的标志性成员,通常被称为Aprini或Sordescentes。我们还更新了C. diffractosuavis (sect. sordescenes)和C. testaceomicaceus (sect. Exsulares)的分类,以获得欧洲钙质土壤上落叶林中系统发育支持的“类牛”物种的最全面概述。介绍了各处理种的生境和分布,并提出了初步的识别关键。引用本文:Schmidt-Stohn G, Bellanger J M, Brandrud TE, Bidaud A, Oertel B, Saar G, ballarjo J, Carteret X, Reyes García JdD, Dondl B, Ploch S, Thines M, Dima B(2025)。大棕绒绒螨的解锁:绒绒螨科4个新种及绒绒螨属的修订分类。人物55:1-57。doi: 10.3114 / persoonia.2025.55.01。
{"title":"The big brown <i>Telamonia</i> unlocked: four new species in <i>Cortinarius</i> section <i>Bovini</i> (<i>Agaricales</i>, <i>Basidiomycota</i>) and a revised taxonomy of bovinoid Cortinarii.","authors":"G Schmidt-Stohn, J-M Bellanger, T E Brandrud, A Bidaud, B Oertel, G Saar, J Ballarà, X Carteret, J D D Reyes García, M Dondl, S Ploch, M Thines, B Dima","doi":"10.3114/persoonia.2025.55.01","DOIUrl":"10.3114/persoonia.2025.55.01","url":null,"abstract":"<p><p>In this study, we describe four species of <i>Cortinarius</i> subgen. <i>Telamonia</i> sect. <i>Bovini</i> as new to science: <i>Cortinarius acutipes</i>, <i>C. cepiformis</i>, <i>C. schistaceus</i> and <i>C. sericeovelatus</i>. We also provide updated descriptions and synonymies for several known species in the section, including <i>C. pachypus</i> (formerly <i>C. terribilis</i> and <i>C. pseudobulbosus</i>), <i>C. sordescens</i> (neotypified here), <i>C. turgidulus</i> and <i>C. urbis-veteris</i>, as well as for <i>C. hillieri</i>, here supported as a genuine <i>Bovini</i> member. In addition, through DNA sequencing of its holotype, we fix here the interpretation of <i>C. aprinus</i>, the iconic member of a difficult group of large, fleshy, grey brown <i>Telamonia</i> species often referred to as <i>Aprini</i> or <i>Sordescentes</i>. We also update the taxonomy of <i>C. diffractosuavis</i> (sect. <i>Sordescentes</i>) and <i>C. testaceomicaceus</i> (sect. <i>Exsulares</i>), to yield a most comprehensive overview of phylogenetically supported \"bovinoid\" species from deciduous forests on calcareous soils of Europe. The habitat and distribution of all treated species are presented, and a tentative identification key is also proposed. <b>Citation:</b> Schmidt-Stohn G, Bellanger J-M, Brandrud TE, Bidaud A, Oertel B, Saar G, Ballarà J, Carteret X, Reyes García JdD, Dondl B, Ploch S, Thines M, Dima B (2025). The big brown <i>Telamonia</i> unlocked: four new species in <i>Cortinarius</i> section <i>Bovini</i> (<i>Agaricales</i>, <i>Basidiomycota</i>) and a revised taxonomy of bovinoid Cortinarii. <i>Persoonia</i> <b>55</b>: 1-57. doi: 10.3114/persoonia.2025.55.01.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"1-57"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12798704/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145971163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01Epub Date: 2025-10-01DOI: 10.3114/persoonia.2025.55.08
M Réblová, J Nekvindová, M Hernández-Restrepo, M Hradilová, M Kolařík
As part of a broader survey of lignicolous saprobic fungi, we investigated fungal taxa from the class Sordariomycetes displaying holoblastic-denticulate conidiogenesis, a distinct developmental process and phylogenetically informative trait. Although these fungi appear morphologically similar in culture, they represent distinct evolutionary lineages. This taxonomic study integrates comparative morphological analyses, phylogenetic reconstruction of five nuclear markers, and analysis of biogeographical patterns through environmental DNA data to introduce novel taxa in the Pleurotheciales and Rhamphoriales. A new genus and species Echinodenticula allantospora and three new species, Phaeoisaria parallela, Rhamphoriopsis cuprea and Rh. denticulata, are described. A rarely encountered species Rhamphoria separata is reported, along with its previously undocumented asexual morph. Furthermore, we successfully demonstrate the utility of two protein-coding genes, rpb2 and tef1, as complementary barcodes for distinguishing closely related Phaeoisaria species. Our findings highlight the significance of holoblastic-denticulate conidiogenesis as a diagnostic feature of the Rhamphoriales and a prevalent trait in the Pleurotheciales. An unknown ascomycete that produced only sterile mycelium in culture is described here as Melanocrypta curvata and placed at an incertae sedis position within the Sordariomycetes. Additionally, we present short-read whole-genome sequencing data for the ex-type strains of the newly described species, providing a valuable genomic resource for future taxonomic, phylogenetic, and functional studies. Environmental DNA data from the GlobalFungi database bring new perspective into the biogeographical patterns of Phaeoisaria, Rhamphoria, and Rhamphoriopsis. The distribution of E. allantospora and M. curvata remains poorly understood, as no records for these species were found in GlobalFungi. This study provides new insights into the molecular systematics, taxonomy, and biogeography of the Rhamphoriales and Pleurotheciales, and highlights the role of environmental DNA metabarcoding in uncovering fungal diversity and distribution patterns. Citation: Réblová M, Nekvindová J, Hernández-Restrepo M, Hradilová M, Kolařík M (2025). Phylogeny, taxonomy and geographic distribution of novel and known fungi with holoblastic-denticulate conidiogenesis in Rhamphoriales and Pleurotheciales (Sordariomycetes). Persoonia55: 277-311. doi: 10.3114/persoonia.2025.55.08.
作为木质素腐生真菌广泛研究的一部分,我们研究了Sordariomycetes纲的真菌分类群,这些分类群显示出全成母细胞-小齿分生,这是一个独特的发育过程和系统发育信息特征。虽然这些真菌在培养中表现出形态上的相似,但它们代表着不同的进化谱系。通过比较形态学分析、5个核标记的系统发育重建和环境DNA数据的生物地理格局分析,为胸膜科和鼠壳科植物引入新的分类群。尿囊棘齿藻(Echinodenticula allantospora)一新属和一新种,平行棘齿藻(Phaeoisaria parallela)、铜棘齿藻(Rhamphoriopsis cuprea)和棘齿藻(Rh)三新种。小齿,被描述。报道了一种罕见的物种Rhamphoria separata,以及其先前未记载的无性形态。此外,我们成功地证明了两个蛋白质编码基因rpb2和tef1作为互补条形码的实用性,用于区分密切相关的Phaeoisaria物种。我们的研究结果强调了全成母细胞-小齿分生作为Rhamphoriales的诊断特征和Pleurotheciales的普遍特征的重要性。一种未知的子囊菌,在培养中只产生无菌菌丝体,这里被描述为黑隐菌,并被放置在sordariomycates的中间位置。此外,我们提供了新描述物种的前型菌株的短读全基因组测序数据,为未来的分类、系统发育和功能研究提供了宝贵的基因组资源。来自GlobalFungi数据库的环境DNA数据为Phaeoisaria, Rhamphoria和Rhamphoriopsis的生物地理格局带来了新的视角。由于在全球真菌中没有发现这些物种的记录,故对尿囊孢杆菌和曲孢杆菌的分布仍知之甚少。本研究为鼠鳃亚目和胸膜亚目的分子系统学、分类学和生物地理学提供了新的见解,并突出了环境DNA元条形码在揭示真菌多样性和分布模式中的作用。引文来源:r blov M, nekvindov J, Hernández-Restrepo M, hradilov M, Kolařík M(2025)。鼠孔菌门和胸膜菌门(Sordariomycetes)中具有全成母细胞-小齿分生的新型和已知真菌的系统发育、分类和地理分布。人:55:277-311。doi: 10.3114 / persoonia.2025.55.08。
{"title":"Phylogeny, taxonomy and geographic distribution of novel and known fungi with holoblastic-denticulate conidiogenesis in <i>Rhamphoriales</i> and <i>Pleurotheciales</i> (<i>Sordariomycetes</i>).","authors":"M Réblová, J Nekvindová, M Hernández-Restrepo, M Hradilová, M Kolařík","doi":"10.3114/persoonia.2025.55.08","DOIUrl":"10.3114/persoonia.2025.55.08","url":null,"abstract":"<p><p>As part of a broader survey of lignicolous saprobic fungi, we investigated fungal taxa from the class <i>Sordariomycetes</i> displaying holoblastic-denticulate conidiogenesis, a distinct developmental process and phylogenetically informative trait. Although these fungi appear morphologically similar in culture, they represent distinct evolutionary lineages. This taxonomic study integrates comparative morphological analyses, phylogenetic reconstruction of five nuclear markers, and analysis of biogeographical patterns through environmental DNA data to introduce novel taxa in the <i>Pleurotheciales</i> and <i>Rhamphoriales</i>. A new genus and species <i>Echinodenticula allantospora</i> and three new species, <i>Phaeoisaria parallela</i>, <i>Rhamphoriopsis cuprea</i> and <i>Rh. denticulata</i>, are described. A rarely encountered species <i>Rhamphoria separata</i> is reported, along with its previously undocumented asexual morph. Furthermore, we successfully demonstrate the utility of two protein-coding genes, <i>rpb2</i> and <i>tef1</i>, as complementary barcodes for distinguishing closely related <i>Phaeoisaria</i> species. Our findings highlight the significance of holoblastic-denticulate conidiogenesis as a diagnostic feature of the <i>Rhamphoriales</i> and a prevalent trait in the <i>Pleurotheciales</i>. An unknown ascomycete that produced only sterile mycelium in culture is described here as <i>Melanocrypta curvata</i> and placed at an incertae sedis position within the <i>Sordariomycetes</i>. Additionally, we present short-read whole-genome sequencing data for the ex-type strains of the newly described species, providing a valuable genomic resource for future taxonomic, phylogenetic, and functional studies. Environmental DNA data from the GlobalFungi database bring new perspective into the biogeographical patterns of <i>Phaeoisaria</i>, <i>Rhamphoria</i>, and <i>Rhamphoriopsis</i>. The distribution of <i>E. allantospora</i> and <i>M. curvata</i> remains poorly understood, as no records for these species were found in GlobalFungi. This study provides new insights into the molecular systematics, taxonomy, and biogeography of the <i>Rhamphoriales</i> and <i>Pleurotheciales</i>, and highlights the role of environmental DNA metabarcoding in uncovering fungal diversity and distribution patterns. <b>Citation:</b> Réblová M, Nekvindová J, Hernández-Restrepo M, Hradilová M, Kolařík M (2025). Phylogeny, taxonomy and geographic distribution of novel and known fungi with holoblastic-denticulate conidiogenesis in <i>Rhamphoriales</i> and <i>Pleurotheciales</i> (<i>Sordariomycetes</i>). <i>Persoonia</i> <b>55</b>: 277-311. doi: 10.3114/persoonia.2025.55.08.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"55 ","pages":"277-311"},"PeriodicalIF":7.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12810756/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145998714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}