首页 > 最新文献

Physiological measurement最新文献

英文 中文
The acute effect of bitemporal electroconvulsive therapy on synchronous changes in heart rate variability and heart rate in patients with depression. 双颞电惊厥治疗对抑郁症患者心率变异性和心率同步变化的急性影响。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/adaad6
Xiang Chen, Changjiang He, Hui Zhang, Han Yang, Jin Li

Objective.The transient autonomic nervous system responses induced by electroconvulsive therapy (ECT) may serve as critical indicators of treatment efficacy and potential side effects; however, their precise characteristics remains unclear. Considering that the intense stimulation of ECT may disrupt the typical antagonistic relationship between the sympathetic and parasympathetic branches, this study aims to conduct a meticulous analysis of the rapid changes in heart rate variability (HRV) and HR during ECT, with a particular focus on their synchronized interplay.Methods.Pulse interval sequences were collected from 50 sessions of bitemporal ECT administered to 27 patients diagnosed with major depressive disorder. The average HR and ultra-short term HRV indices RMSSD and SDNN, as well as the Poincaré indices SD1, SD2 and SD2/SD1, were calculated using a 10 s sliding window with a step size of 1 s. In particular, the synchronous changes between SD1, SD2, SD2/SD1 and HR were analyzed.Results.The synchronous changes of the indices showed different characteristics over time. In particular, SD1, SD2 and HR increased significantly by 41.50 ± 11.45 ms, 33.97 ± 10.98 ms and 9.68 ± 2.00 bpm respectively between 8 and 20 s, whereas they decreased significantly by 19.89 ± 9.07 ms, 17.54 ± 8.54 ms and 3.80 ± 1.33 bpm respectively between 45 and 53 s after ECT stimulus onset. SD1 and SD2 both had highly significant positive correlations with HR in the above phases.Conclusion.The results suggest that bitemporal ECT induces the sympathetic and parasympathetic co-activation during the early ictal period and brief co-inhibition approximately 45 s after stimulus. Our findings may provide new insights comprehending the mechanisms of ECT and its associated cardiovascular risks.

目的:电休克治疗(ECT)诱导的一过性自主神经系统反应可作为判断治疗效果和潜在副作用的重要指标;然而,它们的确切特征仍不清楚。考虑到电痉挛的强烈刺激可能会破坏交感神经和副交感神经之间典型的拮抗关系,本研究旨在对电痉挛期间心率变异性和心率的快速变化进行细致的分析。方法:对27名诊断为重度抑郁症的患者进行了50次双颞叶电痉挛治疗,并收集了脉冲间隔序列。采用步长为1秒的10秒滑动窗口计算平均心率(HR)和超短期心率变异性(HRV)指数RMSSD和SDNN,以及poincar指数SD1、SD2和SD2/SD1。重点分析了SD1、SD2、SD2/SD1与HR的同步变化。结果:各指标同步变化随时间的变化呈现出不同的特征。其中,SD1、SD2和HR在刺激后8 ~ 20秒分别显著增加41.50±11.45 ms、33.97±10.98 ms和9.68±2.00 bpm,而在刺激后45 ~ 53秒分别显著降低19.89±9.07 ms、17.54±8.54 ms和3.80±1.33 bpm。上述各阶段SD1、SD2、SD2/SD1均与HR呈极显著正相关。 ;结果表明,双颞电刺激在刺激后45秒左右诱导交感和副交感神经共激活和短暂共抑制。我们的发现可能为理解电痉挛的机制及其相关的心血管风险提供新的见解。
{"title":"The acute effect of bitemporal electroconvulsive therapy on synchronous changes in heart rate variability and heart rate in patients with depression.","authors":"Xiang Chen, Changjiang He, Hui Zhang, Han Yang, Jin Li","doi":"10.1088/1361-6579/adaad6","DOIUrl":"10.1088/1361-6579/adaad6","url":null,"abstract":"<p><p><i>Objective.</i>The transient autonomic nervous system responses induced by electroconvulsive therapy (ECT) may serve as critical indicators of treatment efficacy and potential side effects; however, their precise characteristics remains unclear. Considering that the intense stimulation of ECT may disrupt the typical antagonistic relationship between the sympathetic and parasympathetic branches, this study aims to conduct a meticulous analysis of the rapid changes in heart rate variability (HRV) and HR during ECT, with a particular focus on their synchronized interplay.<i>Methods.</i>Pulse interval sequences were collected from 50 sessions of bitemporal ECT administered to 27 patients diagnosed with major depressive disorder. The average HR and ultra-short term HRV indices RMSSD and SDNN, as well as the Poincaré indices SD1, SD2 and SD2/SD1, were calculated using a 10 s sliding window with a step size of 1 s. In particular, the synchronous changes between SD1, SD2, SD2/SD1 and HR were analyzed.<i>Results.</i>The synchronous changes of the indices showed different characteristics over time. In particular, SD1, SD2 and HR increased significantly by 41.50 ± 11.45 ms, 33.97 ± 10.98 ms and 9.68 ± 2.00 bpm respectively between 8 and 20 s, whereas they decreased significantly by 19.89 ± 9.07 ms, 17.54 ± 8.54 ms and 3.80 ± 1.33 bpm respectively between 45 and 53 s after ECT stimulus onset. SD1 and SD2 both had highly significant positive correlations with HR in the above phases.<i>Conclusion.</i>The results suggest that bitemporal ECT induces the sympathetic and parasympathetic co-activation during the early ictal period and brief co-inhibition approximately 45 s after stimulus. Our findings may provide new insights comprehending the mechanisms of ECT and its associated cardiovascular risks.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143009922","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Self-critical strategy adjustment based artificial intelligence method in generating diagnostic reports of respiratory diseases. 基于自我批判策略调整的呼吸系统疾病诊断报告生成人工智能方法
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/ada869
Binyue Chen, Guohua Liu, Quan Zhang

Objective. Humanity faces many health challenges, among which respiratory diseases are one of the leading causes of human death. Existing AI-driven pre-diagnosis approaches can enhance the efficiency of diagnosis but still face challenges. For example, single-modal data suffer from information redundancy or loss, difficulty in learning relationships between features, and revealing the obscure characteristics of complex diseases. Therefore, it is critical to explore a method that can assist clinicians in detecting lesions early and in pre-diagnosing corresponding diseases.Approach.This paper introduces a novel network structure, strong constraint self-critical strategy network (SCSCS-Net), which can effectively extract image features from chest x-ray images and generate medical image descriptions, assist clinicians in analyzing patients' medical imaging information, deeply explore potential disease characteristics, and assist in making pre-diagnostic decisions. The SCSCS-Net consists of a reinforced cross-modal feature representation model and a self-critical cross-modal alignment model, which are responsible for learning the features interdependence between images and reports by using a multi-subspace self-attention structure and guiding the model in learning report generation strategies to improve the professionalism and consistency of medical terms in generated reports, respectively.Main results.We further compare our model with some advanced models on the same dataset, and the results demonstrate that our method achieves better performance. Finally, the CE and NLG metrics further confirm that the proposed method acquires the ability to generate high-quality medical reports with higher clinical consistency in generating medical reports.Significance.Our novel method has the potential to improve the early detection and pre-diagnosis of respiratory diseases. The model proposed in this paper allows to narrow the gap between artificial intelligence technology and clinical medical diagnosis and provides the possibility for in-depth integration.

目的:人类面临许多健康挑战,其中呼吸系统疾病是人类死亡的主要原因之一。现有的人工智能驱动的预诊断方法可以提高诊断效率,但仍然面临挑战。例如,单模态数据存在信息冗余或丢失,难以学习特征之间的关系,揭示复杂疾病的模糊特征等问题。因此,探索一种能够帮助临床医生早期发现病变并对相应疾病进行预诊断的方法至关重要。方法:本文介绍了一种新的网络结构SCSCS-Net,该网络可以有效地从胸部x线图像中提取图像特征并生成医学图像描述,帮助临床医生分析患者的医学影像信息,深入挖掘潜在的疾病特征,协助进行诊断前决策。SCSCS-Net包括一个增强的跨模态特征表示模型(RCMFR)和一个自批判跨模态对齐模型(SCCMA),这两个模型分别利用多子空间自注意结构学习图像和报告之间的特征依赖关系,并指导模型学习报告生成策略,以提高生成报告中医学术语的专业性和一致性。主要结果:我们进一步将我们的模型与同一数据集上的一些高级模型进行了比较,结果表明我们的方法取得了更好的性能。最后,CE和NLG指标进一步证实,所提出的方法能够生成高质量的医疗报告,在生成医疗报告时具有更高的临床一致性。意义:该方法有可能提高呼吸系统疾病的早期发现和预诊断。本文提出的模型可以缩小人工智能技术与临床医学诊断之间的差距,为深度融合提供可能。
{"title":"Self-critical strategy adjustment based artificial intelligence method in generating diagnostic reports of respiratory diseases.","authors":"Binyue Chen, Guohua Liu, Quan Zhang","doi":"10.1088/1361-6579/ada869","DOIUrl":"10.1088/1361-6579/ada869","url":null,"abstract":"<p><p><i>Objective</i>. Humanity faces many health challenges, among which respiratory diseases are one of the leading causes of human death. Existing AI-driven pre-diagnosis approaches can enhance the efficiency of diagnosis but still face challenges. For example, single-modal data suffer from information redundancy or loss, difficulty in learning relationships between features, and revealing the obscure characteristics of complex diseases. Therefore, it is critical to explore a method that can assist clinicians in detecting lesions early and in pre-diagnosing corresponding diseases.<i>Approach.</i>This paper introduces a novel network structure, strong constraint self-critical strategy network (SCSCS-Net), which can effectively extract image features from chest x-ray images and generate medical image descriptions, assist clinicians in analyzing patients' medical imaging information, deeply explore potential disease characteristics, and assist in making pre-diagnostic decisions. The SCSCS-Net consists of a reinforced cross-modal feature representation model and a self-critical cross-modal alignment model, which are responsible for learning the features interdependence between images and reports by using a multi-subspace self-attention structure and guiding the model in learning report generation strategies to improve the professionalism and consistency of medical terms in generated reports, respectively.<i>Main results.</i>We further compare our model with some advanced models on the same dataset, and the results demonstrate that our method achieves better performance. Finally, the CE and NLG metrics further confirm that the proposed method acquires the ability to generate high-quality medical reports with higher clinical consistency in generating medical reports.<i>Significance.</i>Our novel method has the potential to improve the early detection and pre-diagnosis of respiratory diseases. The model proposed in this paper allows to narrow the gap between artificial intelligence technology and clinical medical diagnosis and provides the possibility for in-depth integration.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142953092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ventilation-perfusion matching in early-stage of prone position ventilation: a prospective cohort study between COVID-19 ARDS and ARDS from other etiologies. 俯卧位通气早期通气灌注匹配:COVID-19 ARDS与其他病因ARDS的前瞻性队列研究
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/ada8f1
Yingying Yang, Hantian Li, Yi Chi, Inéz Frerichs, Zhanqi Zhao, Yuan Li, Chunyang Zhang, Huiwen Chu, Huaiwu He, Yun Long
<p><p><i>Objective.</i>Prone positioning has been established as a therapeutic strategy for severe acute respiratory distress syndrome (ARDS). In COVID-19-associated ARDS (CARDS), the application of prone position has shown varying responses, influenced by factors such as lung recruitability and SARS-CoV-2-induced pulmonary endothelial dysfunction. This study aimed to compare the early impact of pronation on lung ventilation-perfusion matching (VQmatch) in CARDS and non-COVID-19 ARDS patients (non-CARDS).<i>Approach.</i>This was a two-center, prospective study comparing between CARDS and non-CARDS. Electrical impedance tomography (EIT) was used to compare the VQmatch between supine and early-stage prone positions (∼2 h). The study identified the areas of Deadspace, shunt, and VQmatch. Within the defined VQmatch region, the global inhomogeneity index (VQmatch-GI) was computed to evaluate the degree of heterogeneity. Paired Wilcoxon signed-rank test and Chi-square test were used in statistical analysis.<i>Main results.</i>15 CARDS patients and 14 non-CARDS patients undergoing mechanical ventilation were included. In comparison to the non-CARDS group, the CARDS group exhibited a higher prevalence of diffuse lung disease (15 [100%] vs. 4 [28.6%], CARDS vs. Non-CARDS,<i>p</i>< 0.001), along with elevated SOFA score, PCO<sub>2</sub>, PEEP, and Ppeak. Among non-CARDS patients, 11/14 demonstrated improved oxygenation, whereas only 5/15 CARDS patients exhibited oxygenation improvement in prone ventilation. In 13/29 patients with oxygenation improvement (defined as above 20% increase in SpO<sub>2</sub>/FiO<sub>2</sub>), there was a significant decreased deadspace (21.3 [11.5, 33.1] vs. 9.7 [7.3, 16.9],<i>p</i>= 0.039), and VQmatch showed an upward trend. When comparing prone ventilation to supine ventilation, non-CARDS patients showed a significant improvement in overall VQmatch (Supine 65.7 [49.7, 68.5] vs. Prone 67.4 [60.8, 72.6],<i>p</i>= 0.019). CARDS patients had a notable decrease in ventral VQmatch (VQmatch_Ventral: Supine 35.0 [26.9, 42.0] vs. Prone 22.7 [12.4, 32.9],<i>p</i>= 0.003), and an improvement in dorsal VQmatch (VQmatch_Dorsal: Supine 33.4 [20.4, 39.4] vs. Prone 46.4 [37.4, 48.4],<i>p</i>= 0.031), leading to no significant improvement in overall VQmatch. Ten CARDS patients with no improvement in VQmatch had increased shunting and VQmatch-GI.<i>Significance.</i>In non-CARDS patients, the improvement in oxygenation and VQmatch following prone positioning exhibits a consistent pattern. Conversely, in CARDS patients, the impact of prone positioning reveals considerable individual variability. This study indicates that the response to short-time prone ventilation can vary in ARDS patients with different etiologies.<b>Trial registration:</b>NCT05816928, 04/17/2023, retrospectively registered. Ventilation-Perfusion Matching in Early-stage Prone Position Ventilation, NCT05816928. Registered 17 April 2023 - Retrospectively registered,https://clini
目的:俯卧位是治疗严重急性呼吸窘迫综合征(ARDS)的一种方法。在covid -19相关的ARDS (ARDS)中,俯卧位的应用表现出不同的反应,受肺招募能力和sars - cov -2诱导的肺内皮功能障碍等因素的影响。本研究旨在比较旋前对CARDS和非covid -19 ARDS (non-CARDS)患者肺通气-灌注匹配(VQmatch)的早期影响。方法: ;这是一项双中心、前瞻性研究,比较CARDS和非CARDS患者。采用电阻抗断层扫描(EIT)比较仰卧位与早期俯卧位(~2h)的vq匹配。该研究确定了死区、分流区和VQmatch区。在定义的VQmatch区域内,计算全局不均匀性指数(VQmatch- gi)来评估异质性程度。统计分析采用配对Wilcoxon sign -rank检验和卡方检验。 ;主要结果: ;纳入机械通气的卡组患者15例,非卡组患者14例。与非卡组相比,卡组弥漫性肺病的患病率更高(15[100%]对4[28.6%],卡组与非卡组,p<0.001),同时SOFA评分、PCO2、PEEP和峰值升高。在非CARDS患者中,11/14表现出氧合改善,而只有5/15的CARDS患者在俯卧位通气时表现出氧合改善。在13/29例氧合改善(定义为SpO2/FiO2升高20%以上)患者中,死亡空间明显降低(21.3 [11.5,33.1]vs. 9.7 [7.3, 16.9], p=0.039), VQmatch呈上升趋势。当比较俯卧位通气与仰卧位通气时,非cards患者整体VQmatch有显著改善(仰卧位65.7 [49.7,68.5]vs俯卧位67.4 [60.8,72.6],p=0.019)。卡片组患者腹侧VQmatch明显降低(vqmatch_腹侧:仰卧位35.0[26.9,42.0]比俯卧位22.7 [12.4,32.9],p=0.003),背部VQmatch明显改善(vqmatch_背侧:仰卧位33.4[20.4,39.4]比俯卧位46.4 [37.4,48.4],p=0.031),但整体VQmatch无明显改善。10例VQmatch未改善的卡组患者出现分流和VQmatch- gi增加。 ;意义: ;非卡组患者俯卧位后氧合和VQmatch改善呈现一致模式。相反,在CARDS患者中,俯卧位的影响显示出相当大的个体差异。本研究表明,不同病因的ARDS患者对短时间俯卧位通气的反应不同。试验注册号:nct05816928,2023年4月17日,回顾性注册。
{"title":"Ventilation-perfusion matching in early-stage of prone position ventilation: a prospective cohort study between COVID-19 ARDS and ARDS from other etiologies.","authors":"Yingying Yang, Hantian Li, Yi Chi, Inéz Frerichs, Zhanqi Zhao, Yuan Li, Chunyang Zhang, Huiwen Chu, Huaiwu He, Yun Long","doi":"10.1088/1361-6579/ada8f1","DOIUrl":"10.1088/1361-6579/ada8f1","url":null,"abstract":"&lt;p&gt;&lt;p&gt;&lt;i&gt;Objective.&lt;/i&gt;Prone positioning has been established as a therapeutic strategy for severe acute respiratory distress syndrome (ARDS). In COVID-19-associated ARDS (CARDS), the application of prone position has shown varying responses, influenced by factors such as lung recruitability and SARS-CoV-2-induced pulmonary endothelial dysfunction. This study aimed to compare the early impact of pronation on lung ventilation-perfusion matching (VQmatch) in CARDS and non-COVID-19 ARDS patients (non-CARDS).&lt;i&gt;Approach.&lt;/i&gt;This was a two-center, prospective study comparing between CARDS and non-CARDS. Electrical impedance tomography (EIT) was used to compare the VQmatch between supine and early-stage prone positions (∼2 h). The study identified the areas of Deadspace, shunt, and VQmatch. Within the defined VQmatch region, the global inhomogeneity index (VQmatch-GI) was computed to evaluate the degree of heterogeneity. Paired Wilcoxon signed-rank test and Chi-square test were used in statistical analysis.&lt;i&gt;Main results.&lt;/i&gt;15 CARDS patients and 14 non-CARDS patients undergoing mechanical ventilation were included. In comparison to the non-CARDS group, the CARDS group exhibited a higher prevalence of diffuse lung disease (15 [100%] vs. 4 [28.6%], CARDS vs. Non-CARDS,&lt;i&gt;p&lt;/i&gt;&lt; 0.001), along with elevated SOFA score, PCO&lt;sub&gt;2&lt;/sub&gt;, PEEP, and Ppeak. Among non-CARDS patients, 11/14 demonstrated improved oxygenation, whereas only 5/15 CARDS patients exhibited oxygenation improvement in prone ventilation. In 13/29 patients with oxygenation improvement (defined as above 20% increase in SpO&lt;sub&gt;2&lt;/sub&gt;/FiO&lt;sub&gt;2&lt;/sub&gt;), there was a significant decreased deadspace (21.3 [11.5, 33.1] vs. 9.7 [7.3, 16.9],&lt;i&gt;p&lt;/i&gt;= 0.039), and VQmatch showed an upward trend. When comparing prone ventilation to supine ventilation, non-CARDS patients showed a significant improvement in overall VQmatch (Supine 65.7 [49.7, 68.5] vs. Prone 67.4 [60.8, 72.6],&lt;i&gt;p&lt;/i&gt;= 0.019). CARDS patients had a notable decrease in ventral VQmatch (VQmatch_Ventral: Supine 35.0 [26.9, 42.0] vs. Prone 22.7 [12.4, 32.9],&lt;i&gt;p&lt;/i&gt;= 0.003), and an improvement in dorsal VQmatch (VQmatch_Dorsal: Supine 33.4 [20.4, 39.4] vs. Prone 46.4 [37.4, 48.4],&lt;i&gt;p&lt;/i&gt;= 0.031), leading to no significant improvement in overall VQmatch. Ten CARDS patients with no improvement in VQmatch had increased shunting and VQmatch-GI.&lt;i&gt;Significance.&lt;/i&gt;In non-CARDS patients, the improvement in oxygenation and VQmatch following prone positioning exhibits a consistent pattern. Conversely, in CARDS patients, the impact of prone positioning reveals considerable individual variability. This study indicates that the response to short-time prone ventilation can vary in ARDS patients with different etiologies.&lt;b&gt;Trial registration:&lt;/b&gt;NCT05816928, 04/17/2023, retrospectively registered. Ventilation-Perfusion Matching in Early-stage Prone Position Ventilation, NCT05816928. Registered 17 April 2023 - Retrospectively registered,https://clini","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142966402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Accuracy of flow volume estimation in the dilated aorta using 4D flow MRI: a pulsatile phantom study. 四维血流MRI对扩张主动脉血流容量估计的准确性:脉动幻像研究。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/adab4e
Eduardo E Rodríguez, Alejandro Valda, Mariano E Casciaro, Sebastian Graf, Edmundo Cabrera Fischer, Damian Craiem

Objectives.Aortic dilatation is a severe pathology that increases the risk of rupture and its hemodynamics could be accurately assessed by using the 4D flow cardiovascular magnetic resonance (CMR) technique but flow assessment under complex flow patterns require validation. The aim of this work was to develop anin vitrosystem compatible with CMR to assess the accuracy of volume flow measurements in dilated aortas.Approach.Two latex models, one with ascending and the other with abdominal aortic aneurysms were manufactured to ensure a constant and controlled net flow volume along the aortic length. A pneumatic piston driven by a stepper motor and controlled by an embedded system located in the control room modulated a pulsatile fluid flow using a pump with an elastic membrane placed in the magnet near the elastic models. All the visualization and measurement algorithms were integrated into a custom computer platform. 4D flow imaging was used to estimate the flow rate and volume through multiple aortic planes and compared to the reference assessed by weight method and to 2D flow measurements.Main results.The errors of flow volume assessment using 4D flow remained within reasonable limits along the length of the aortic models. Mean differences in net flow volume from the reference were less than 2 ml (range -4 to 6 ml), corresponding to mean relative differences of less than 4% (range -8% to 11%). Averaged net, forward and backward flow volume estimations along the aortic length were similar using 2D and 4D flow measurements (p> 0.05). Peak forward and backward flow rates increased in the dilated regions and were comparable to those observed in patients.Significance.The accuracy of flow volume estimates in complex flow patterns, such as those observed in patients with aneurysms, was validatedin vitrousing 4D flow.

目的:主动脉扩张是一种增加破裂风险的严重病理,其血流动力学可以通过4D血流心血管磁共振(CMR)技术准确评估,但复杂血流模式下的血流评估需要验证。这项工作的目的是开发一种与CMR兼容的体外系统,以评估扩张主动脉体积流量测量的准确性。制作两个乳胶模型,一个是上升动脉瘤,另一个是腹主动脉瘤,以确保沿主动脉长度的净流量恒定和可控。由步进电机驱动并由位于控制室的嵌入式系统控制的气动活塞,使用在靠近弹性模型的磁铁中放置有弹性膜的泵来调制脉动流体流量。所有的可视化和测量算法都集成到一个定制的计算机平台中。采用4D血流显像估计通过多个主动脉平面的流量和体积,并与体重法评估的参考值和2D血流测量值进行比较。 ;沿主动脉模型长度方向,4D血流评估血流容量的误差保持在合理范围内。净流量与参考的平均差异小于2 ml(范围为-4至6 ml),对应于平均相对差异小于4%(范围为-8%至11%)。使用2D和4D流量测量,沿主动脉长度的平均净流量、前向和后向流量估计相似(p>0.05)。扩张区前后流速峰值增加,与在患者中观察到的结果相当。& # xD;意义。在复杂的流量模式下,如在动脉瘤患者中观察到的流量,在体外使用4D血流验证了流量估计的准确性。& # xD。
{"title":"Accuracy of flow volume estimation in the dilated aorta using 4D flow MRI: a pulsatile phantom study.","authors":"Eduardo E Rodríguez, Alejandro Valda, Mariano E Casciaro, Sebastian Graf, Edmundo Cabrera Fischer, Damian Craiem","doi":"10.1088/1361-6579/adab4e","DOIUrl":"10.1088/1361-6579/adab4e","url":null,"abstract":"<p><p><i>Objectives.</i>Aortic dilatation is a severe pathology that increases the risk of rupture and its hemodynamics could be accurately assessed by using the 4D flow cardiovascular magnetic resonance (CMR) technique but flow assessment under complex flow patterns require validation. The aim of this work was to develop an<i>in vitro</i>system compatible with CMR to assess the accuracy of volume flow measurements in dilated aortas.<i>Approach.</i>Two latex models, one with ascending and the other with abdominal aortic aneurysms were manufactured to ensure a constant and controlled net flow volume along the aortic length. A pneumatic piston driven by a stepper motor and controlled by an embedded system located in the control room modulated a pulsatile fluid flow using a pump with an elastic membrane placed in the magnet near the elastic models. All the visualization and measurement algorithms were integrated into a custom computer platform. 4D flow imaging was used to estimate the flow rate and volume through multiple aortic planes and compared to the reference assessed by weight method and to 2D flow measurements.<i>Main results.</i>The errors of flow volume assessment using 4D flow remained within reasonable limits along the length of the aortic models. Mean differences in net flow volume from the reference were less than 2 ml (range -4 to 6 ml), corresponding to mean relative differences of less than 4% (range -8% to 11%). Averaged net, forward and backward flow volume estimations along the aortic length were similar using 2D and 4D flow measurements (<i>p</i>> 0.05). Peak forward and backward flow rates increased in the dilated regions and were comparable to those observed in patients.<i>Significance.</i>The accuracy of flow volume estimates in complex flow patterns, such as those observed in patients with aneurysms, was validated<i>in vitro</i>using 4D flow.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143009916","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ST-CIRL: a reinforcement learning-based feature selection approach for enhanced anxiety classification.
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/adb006
Shikha Shikha, Divyashikha Sethia, S Indu

A physiological signal-based Human-Computer Interaction (HCI) system provides a communication link between human emotional states and external devices. Accurately classifying these signals is vital for effective interaction, which requires extracting and selecting the most discriminative features to differentiate between various emotional states. This paper introduces the SMOTETomek-Correlated Interactive Reinforcement Learning (ST-CIRL) framework for anxiety classification, which leverages meta-descriptive statistics to enhance the state representation in the reinforcement learning process. Firstly, it addresses class imbalance using SMOTETomek and further reduces dimensionality by pruning redundant features. Secondly, the ST-CIRL framework enhances classification accuracy through the collaboration of multiple agents to select the most informative features using Interactive Reinforcement Learning (IRL). Further, the paper utilizes classifiers, including Random Forest (RF), Support Vector Machine (SVM), K-Nearest Neighbour (KNN), and Light Gradient Boosting (LGBM) for anxiety classification. Thirdly, the hyperparameters of these machine learning algorithms are tuned using the Optuna approach to enhance model performance. The proposed ST-CIRL framework achieves a maximum accuracy of 95.35% and an F1-score of 95.49% using the LightGBM classifier. Furthermore, the results demonstrate that the proposed approach outperforms current state-of-the-art methods. These findings validate the efficacy of the SMOTETomek method and the innovative feature optimization approach, highlighting the potential of reinforcement learning in enhancing HCI systems and expanding its applicability in intelligent system design.

{"title":"ST-CIRL: a reinforcement learning-based feature selection approach for enhanced anxiety classification.","authors":"Shikha Shikha, Divyashikha Sethia, S Indu","doi":"10.1088/1361-6579/adb006","DOIUrl":"https://doi.org/10.1088/1361-6579/adb006","url":null,"abstract":"<p><p>A physiological signal-based Human-Computer Interaction (HCI) system provides a communication link between human emotional states and external devices. Accurately classifying these signals is vital for effective interaction, which requires extracting and selecting the most discriminative features to differentiate between various emotional states. This paper introduces the SMOTETomek-Correlated Interactive Reinforcement Learning (ST-CIRL) framework for anxiety classification, which leverages meta-descriptive statistics to enhance the state representation in the reinforcement learning process. Firstly, it addresses class imbalance using SMOTETomek and further reduces dimensionality by pruning redundant features. Secondly, the ST-CIRL framework enhances classification accuracy through the collaboration of multiple agents to select the most informative features using Interactive Reinforcement Learning (IRL).&#xD;Further, the paper utilizes classifiers, including Random Forest (RF), Support Vector Machine (SVM), K-Nearest Neighbour (KNN), and Light Gradient Boosting (LGBM) for anxiety classification. Thirdly, the hyperparameters of these machine learning algorithms are tuned using the Optuna approach to enhance model performance. The proposed ST-CIRL framework achieves a maximum accuracy of 95.35% and an F1-score of 95.49% using the LightGBM classifier. Furthermore, the results demonstrate that the proposed approach outperforms current state-of-the-art methods. These findings validate the efficacy of the SMOTETomek method and the innovative feature optimization approach, highlighting the potential of reinforcement learning in enhancing HCI systems and expanding its applicability in intelligent system design.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143067238","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
From motion to emotion: exploring challenging behaviors in autism spectrum disorder through analysis of wearable physiology and movement. 从运动到情绪:通过分析可穿戴生理和运动来探索自闭症谱系障碍的挑战性行为。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/ada51b
Ali Bahrami Rad, Tania Villavicencio, Yashar Kiarashi, Conor Anderson, Jenny Foster, Hyeokhyen Kwon, Theresa Hamlin, Johanna Lantz, Gari D Clifford

Objective.This study aims to evaluate the efficacy of wearable physiology and movement sensors in identifying a spectrum of challenging behaviors, including self-injurious behavior, in children and teenagers with autism spectrum disorder (ASD) in real-world settings.Approach.We utilized a long-short-term memory network with features derived using the wavelet scatter transform to analyze physiological biosignals, including electrodermal activity and skin temperature, alongside three-dimensional movement data captured via accelerometers. The study was conducted in naturalistic environments, focusing on participants' daily activities.Main results.Our findings indicate that the best performance in detecting challenging behaviors was achieved using movement data. The results showed a sensitivity of 0.62, specificity of 0.71, F1-score of 0.36, and an area under the ROC curve of 0.71. These results are particularly significant given the study's focus on real-world scenarios and the limited existing research in this area.Significance.This study demonstrates that using wearable technology to record physiological and movement signals can detect challenging behaviors in children with ASD in real-world settings. This methodology has the potential to greatly improve the management of these behaviors, thereby enhancing the quality of life for children with ASD and their caregivers. This approach marks a significant step forward in applying the outcome of ASD research in practical, everyday environments.

目的:本研究旨在评估可穿戴生理和运动传感器在识别自闭症谱系障碍(ASD)儿童和青少年一系列具有挑战性的行为(包括自残行为(SIB))中的功效。方法:我们利用长短期记忆(LSTM)网络,利用小波散射变换衍生的特征来分析生理生物信号,包括皮电活动和皮肤温度,以及通过加速度计捕获的三维运动数据。这项研究是在自然环境中进行的,重点关注参与者的日常活动。主要结果:我们的研究结果表明,使用运动数据在检测挑战性行为方面取得了最好的效果。结果显示,敏感性为0.62,特异性为0.71,f1评分为0.36,ROC曲线下面积为0.71。考虑到该研究的重点是现实世界的场景,以及该领域有限的现有研究,这些结果尤为重要。意义:本研究表明,使用可穿戴技术记录生理和运动信号可以检测现实环境中ASD儿童的挑战性行为。这种方法有可能极大地改善这些行为的管理,从而提高自闭症儿童及其照顾者的生活质量。这种方法标志着将ASD研究成果应用于实际的日常环境中迈出了重要的一步。
{"title":"From motion to emotion: exploring challenging behaviors in autism spectrum disorder through analysis of wearable physiology and movement.","authors":"Ali Bahrami Rad, Tania Villavicencio, Yashar Kiarashi, Conor Anderson, Jenny Foster, Hyeokhyen Kwon, Theresa Hamlin, Johanna Lantz, Gari D Clifford","doi":"10.1088/1361-6579/ada51b","DOIUrl":"10.1088/1361-6579/ada51b","url":null,"abstract":"<p><p><i>Objective.</i>This study aims to evaluate the efficacy of wearable physiology and movement sensors in identifying a spectrum of challenging behaviors, including self-injurious behavior, in children and teenagers with autism spectrum disorder (ASD) in real-world settings.<i>Approach.</i>We utilized a long-short-term memory network with features derived using the wavelet scatter transform to analyze physiological biosignals, including electrodermal activity and skin temperature, alongside three-dimensional movement data captured via accelerometers. The study was conducted in naturalistic environments, focusing on participants' daily activities.<i>Main results.</i>Our findings indicate that the best performance in detecting challenging behaviors was achieved using movement data. The results showed a sensitivity of 0.62, specificity of 0.71, F1-score of 0.36, and an area under the ROC curve of 0.71. These results are particularly significant given the study's focus on real-world scenarios and the limited existing research in this area.<i>Significance.</i>This study demonstrates that using wearable technology to record physiological and movement signals can detect challenging behaviors in children with ASD in real-world settings. This methodology has the potential to greatly improve the management of these behaviors, thereby enhancing the quality of life for children with ASD and their caregivers. This approach marks a significant step forward in applying the outcome of ASD research in practical, everyday environments.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11775438/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142922589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
tinyHLS: a novel open source high level synthesis tool targeting hardware accelerators for artificial neural network inference. tinyHLS:一个新颖的开源高级综合工具,目标是用于人工神经网络推理的硬件加速器。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-29 DOI: 10.1088/1361-6579/ada8f0
Ingo Hoyer, Alexander Utz, Christoph Hoog Antink, Karsten Seidl

Objective.In recent years, wearable devices such as smartwatches and smart patches have revolutionized biosignal acquisition and analysis, particularly for monitoring electrocardiography (ECG). However, the limited power supply of these devices often precludes real-time data analysis on the patch itself.Approach.This paper introduces a novel Python package, tinyHLS (High Level Synthesis), designed to address these challenges by converting Python-based AI models into platform-independent hardware description language code accelerators. Specifically designed for convolutional neural networks, tinyHLS seamlessly integrates into the AI developer's workflow in Python TensorFlow Keras. Our methodology leverages a template-based hardware compiler that ensures flexibility, efficiency, and ease of use. In this work, tinyHLS is first-published featuring templates for several layers of neural networks, such as dense, convolution, max and global average pooling. In the first version, rectified linear unit is supported as activation. It targets one-dimensional data, with a particular focus on time series data.Main results.The generated accelerators are validated in detecting atrial fibrillation on ECG data, demonstrating significant improvements in processing speed (62-fold) and energy efficiency (4.5-fold). Quality of code and synthesizability are ensured by validating the outputs with commercial ASIC design tools.Significance.Importantly, tinyHLS is open-source and does not rely on commercial tools, making it a versatile solution for both academic and commercial applications. The paper also discusses the integration with an open-source RISC-V and potential for future enhancements of tinyHLS, including its application in edge servers and cloud computing. The source code is available on GitHub:https://github.com/Fraunhofer-IMS/tinyHLS.

目的:近年来,智能手表和智能贴片等可穿戴设备彻底改变了生物信号的采集和分析,尤其是心电图(ECG)监测。然而,由于这些设备的电源有限,往往无法对贴片本身进行实时数据分析:本文介绍了一个新颖的 Python 软件包 tinyHLS(高级合成),旨在通过将基于 Python 的人工智能模型转换为独立于平台的硬件描述语言(HDL)代码加速器来应对这些挑战。tinyHLS 专为卷积神经网络(CNN)设计,可无缝集成到 Python TensorFlow Keras 的人工智能开发人员工作流程中。我们的方法利用基于模板的硬件编译器,确保了灵活性、效率和易用性。在这项工作中,tinyHLS 首次发布了几层神经网络的模板,如密集、卷积、最大值和全局平均池化。在第一个版本中,整流线性单元(ReLU)支持激活。它的目标是一维数据,尤其侧重于时间序列数据:主要成果:生成的加速器在检测心电图(ECG)数据中的心房颤动(AF)时得到了验证,在处理速度(62 倍)和能效(4.5 倍)方面都有显著提高。通过使用商业 ASIC 设计工具验证输出结果,确保了代码质量和可合成性:重要的是,tinyHLS 是开源的,不依赖于商业工具,因此是学术和商业应用的通用解决方案。本文还讨论了与开源 RISCV 的集成以及 tinyHLS 未来的增强潜力,包括其在边缘服务器和云计算中的应用。源代码可在 GitHub 上获取:https://github.com/Fraunhofer-IMS/tinyHLS。
{"title":"tinyHLS: a novel open source high level synthesis tool targeting hardware accelerators for artificial neural network inference.","authors":"Ingo Hoyer, Alexander Utz, Christoph Hoog Antink, Karsten Seidl","doi":"10.1088/1361-6579/ada8f0","DOIUrl":"10.1088/1361-6579/ada8f0","url":null,"abstract":"<p><p><i>Objective.</i>In recent years, wearable devices such as smartwatches and smart patches have revolutionized biosignal acquisition and analysis, particularly for monitoring electrocardiography (ECG). However, the limited power supply of these devices often precludes real-time data analysis on the patch itself.<i>Approach.</i>This paper introduces a novel Python package, tinyHLS (High Level Synthesis), designed to address these challenges by converting Python-based AI models into platform-independent hardware description language code accelerators. Specifically designed for convolutional neural networks, tinyHLS seamlessly integrates into the AI developer's workflow in Python TensorFlow Keras. Our methodology leverages a template-based hardware compiler that ensures flexibility, efficiency, and ease of use. In this work, tinyHLS is first-published featuring templates for several layers of neural networks, such as dense, convolution, max and global average pooling. In the first version, rectified linear unit is supported as activation. It targets one-dimensional data, with a particular focus on time series data.<i>Main results.</i>The generated accelerators are validated in detecting atrial fibrillation on ECG data, demonstrating significant improvements in processing speed (62-fold) and energy efficiency (4.5-fold). Quality of code and synthesizability are ensured by validating the outputs with commercial ASIC design tools.<i>Significance.</i>Importantly, tinyHLS is open-source and does not rely on commercial tools, making it a versatile solution for both academic and commercial applications. The paper also discusses the integration with an open-source RISC-V and potential for future enhancements of tinyHLS, including its application in edge servers and cloud computing. The source code is available on GitHub:https://github.com/Fraunhofer-IMS/tinyHLS.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142966300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PhysioEx, a new Python library for explainable sleep staging through deep learning.
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-28 DOI: 10.1088/1361-6579/adaf73
Guido Gagliardi, Luca Alfeo, Mario G C A Cimino, Gaetano Valenza, Maarten De Vos

Objective: Sleep staging is a crucial task in clinical and research contexts for diagnosing and understanding sleep disorders. This work introduces PhysioEx, a Python library designed to support the analysis of sleep stages using deep learning and Explainable AI (XAI). Approach: PhysioEx provides an extensible and modular API for standardizing and automating the sleep staging pipeline, covering data preprocessing, model training, testing, fine-tuning, and explainability. It supports both low-resource devices and high-performance computing clusters and includes pretrained models based on the Sleep Heart Health Study (SHHS) dataset. These models support single-channel EEG and multichannel EEG-EOG-EMG configurations and are easily adaptable to custom datasets. PhysioEx also features a command-line interface toolbox allowing users to streamline the model development and deployment. The library offers a range of XAI post-hoc methods to explain model decisions and align them with expert knowledge. Main results: PhysioEx benchmark state-of-the-art sleep staging models in a standard pipeline. Enabling a fair comparison between them both on the training source and out-of-domain sources. Its XAI techniques provide insights into deep learning-based sleep staging by linking model decisions to human-understandable concepts, such as AASM-defined rules. Significance: PhysioEx addresses the need for a standardized and accessible platform for sleep staging analysis, combining deep learning and XAI. By supporting modular workflows and explainable insights, it bridges the gap between machine learning models and clinical expertise. PhysioEx is publicly available and installable via pip, making it a valuable tool for researchers and practitioners in sleep medicine.

{"title":"PhysioEx, a new Python library for explainable sleep staging through deep learning.","authors":"Guido Gagliardi, Luca Alfeo, Mario G C A Cimino, Gaetano Valenza, Maarten De Vos","doi":"10.1088/1361-6579/adaf73","DOIUrl":"https://doi.org/10.1088/1361-6579/adaf73","url":null,"abstract":"<p><strong>Objective: </strong>&#xD;Sleep staging is a crucial task in clinical and research contexts for diagnosing and understanding sleep disorders. This work introduces PhysioEx, a Python library designed to support the analysis of sleep stages using deep learning and Explainable AI (XAI). &#xD;&#xD;Approach:&#xD;PhysioEx provides an extensible and modular API for standardizing and automating the sleep staging pipeline, covering data preprocessing, model training, testing, fine-tuning, and explainability. It supports both low-resource devices and high-performance computing clusters and includes pretrained models based on the Sleep Heart Health Study (SHHS) dataset. These models support single-channel EEG and multichannel EEG-EOG-EMG configurations and are easily adaptable to custom datasets. PhysioEx also features a command-line interface toolbox allowing users to streamline the model development and deployment. The library offers a range of XAI post-hoc methods to explain model decisions and align them with expert knowledge. &#xD;&#xD;Main results:&#xD;PhysioEx benchmark state-of-the-art sleep staging models in a standard pipeline. Enabling a fair comparison between them both on the training source and out-of-domain sources. Its XAI techniques provide insights into deep learning-based sleep staging by linking model decisions to human-understandable concepts, such as AASM-defined rules. &#xD;&#xD;Significance:&#xD;PhysioEx addresses the need for a standardized and accessible platform for sleep staging analysis, combining deep learning and XAI. By supporting modular workflows and explainable insights, it bridges the gap between machine learning models and clinical expertise. PhysioEx is publicly available and installable via pip, making it a valuable tool for researchers and practitioners in sleep medicine.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143060136","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
REDT: a specialized transformer model for the respiratory phase and adventitious sound detection.
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-27 DOI: 10.1088/1361-6579/adaf08
Jianhong Wang, Gaoyang Dong, Yufei Shen, Xiaoling Xu, Minghui Zhang, Ping Sun

Background and objective: In contrast to respiratory sound classification, respiratory phase and adventitious sound event detection provides more detailed and accurate respiratory information, which is clinically important for respiratory disorders. However, current respiratory sound event detection models mainly use convolutional neural networks to generate frame-level predictions. A significant drawback of the frame-based model lies in its pursuit of optimal frame-level predictions rather than the best event-level ones. Moreover, it demands post-processing and is incapable of being trained in an entirely end-to-end fashion. Based on the above research status, this paper proposes an event-based Transformer method - Respiratory Events Detection Transformer (REDT) for multi-class respiratory sound event detection task to achieve efficient recognition and localization of the respiratory phase and adventitious sound events.

Approach: Firstly, REDT approach employs the Transformer for time-frequency analysis of respiratory sound signals to extract essential features. Secondly, REDT converts these features into timestamp representations and achieves sound event detection by predicting the location and category of timestamps.

Main results: Our method is validated on the public dataset HF_Lung_V1. The experimental results show that our F1 scores for inspiration, expiration, Continuous Adventitious Sound(CAS) and Discontinuous Adventitious Sound(DAS) are 90.5%, 77.3%, 78.9%, and 59.4%, respectively.

Significance: These results demonstrate the method's significant performance in respiratory sound event detection.

{"title":"REDT: a specialized transformer model for the respiratory phase and adventitious sound detection.","authors":"Jianhong Wang, Gaoyang Dong, Yufei Shen, Xiaoling Xu, Minghui Zhang, Ping Sun","doi":"10.1088/1361-6579/adaf08","DOIUrl":"https://doi.org/10.1088/1361-6579/adaf08","url":null,"abstract":"<p><strong>Background and objective: </strong>In contrast to respiratory sound classification, respiratory phase and adventitious sound event detection provides more detailed and accurate respiratory information, which is clinically important for respiratory disorders. However, current respiratory sound event detection models mainly use convolutional neural networks to generate frame-level predictions. &#xD;A significant drawback of the frame-based model lies in its pursuit of optimal frame-level predictions rather than the best event-level ones. Moreover, it demands post-processing and is incapable of being trained in an entirely end-to-end fashion. Based on the above research status, this paper proposes an event-based Transformer method - Respiratory Events Detection Transformer (REDT) for multi-class respiratory sound event detection task to achieve efficient recognition and localization of the respiratory phase and adventitious sound events.</p><p><strong>Approach: </strong>Firstly, REDT approach employs the Transformer for time-frequency analysis of respiratory sound signals to extract essential features. Secondly, REDT converts these features into timestamp representations and achieves sound event detection by predicting the location and category of timestamps.</p><p><strong>Main results: </strong>Our method is validated on the public dataset HF_Lung_V1. The experimental results show that our F1 scores for inspiration, expiration, Continuous Adventitious Sound(CAS) and Discontinuous Adventitious Sound(DAS) are 90.5%, 77.3%, 78.9%, and 59.4%, respectively.</p><p><strong>Significance: </strong>These results demonstrate the method's significant performance in respiratory sound event detection.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143053158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A systematic review of automated prediction of sudden cardiac death using ECG signals. 利用心电信号自动预测心源性猝死的系统综述。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2025-01-23 DOI: 10.1088/1361-6579/ad9ce5
Preeti P Ghasad, Jagath V S Vegivada, Vipin M Kamble, Ankit A Bhurane, Nikhil Santosh, Manish Sharma, Ru-San Tan, U Rajendra Acharya
<p><p><i>Background</i>. Sudden cardiac death (SCD) stands as a life-threatening cardiac event capable of swiftly claiming lives. It ranks prominently among the leading causes of global mortality, contributing to approximately 10% of deaths worldwide. The timely anticipation of SCD holds the promise of immediate life-saving interventions, such as cardiopulmonary resuscitation. However, recent strides in the realms of deep learning (DL), machine learning (ML), and artificial intelligence have ushered in fresh opportunities for the automation of SCD prediction using physiological signals. Researchers have devised numerous models to automatically predict SCD using a combination of diverse feature extraction techniques and classifiers. Methods: We conducted a thorough review of research publications ranging from 2011 to 2023, with a specific focus on the automated prediction of SCD. Traditionally, specialists utilize molecular biomarkers, symptoms, and 12-lead ECG recordings for SCD prediction. However, continuous patient monitoring by experts is impractical, and only a fraction of patients seeks help after experiencing symptoms. However, over the past two decades, ML techniques have emerged and evolved for this purpose. Importantly, since 2021, the studies we have scrutinized delve into a diverse array of ML and DL algorithms, encompassing K-nearest neighbors, support vector machines, decision trees, random forest, Naive Bayes, and convolutional neural networks as classifiers.<i>Results</i>. This literature review presents a comprehensive analysis of ML and DL models employed in predicting SCD. The analysis provided valuable information on the fundamental structure of cardiac fatalities, extracting relevant characteristics from electrocardiogram (ECG) and heart rate variability (HRV) signals, using databases, and evaluating classifier performance. The review offers a succinct yet thorough examination of automated SCD prediction methodologies, emphasizing current constraints and underscoring the necessity for further advancements. It serves as a valuable resource, providing valuable insights and outlining potential research directions for aspiring scholars in the domain of SCD prediction.<i>Conclusions</i>. In recent years, researchers have made substantial strides in the prediction of SCD by leveraging openly accessible databases such as the MIT-BIH SCD Holter and Normal Sinus Rhythm, which contains extensive 24 h recordings of SCD patients. These sophisticated methodologies have previously demonstrated the potential to achieve remarkable accuracy, reaching levels as high as 97%, and can forecast SCD events with a lead time of 30-70 min. Despite these promising outcomes, the quest for even greater accuracy and reliability persists. ML and DL methodologies have shown great promise, their performance is intrinsically linked to the volume of training data available. Most predictive models rely on small-scale databases, raising concerns about their appl
心源性猝死(SCD)是一种危及生命的心脏事件,能够迅速夺去生命。研究人员已经设计了许多模型,旨在通过结合不同的特征提取技术和分类器来自动预测scd。我们对2011年至2023年的研究出版物进行了严格的审查,特别关注SCD的自动预测,这是全球范围内日益增长的健康问题。在过去的二十年中,机器学习(ML)技术已经出现并发展为这一目的。值得注意的是,自2021年以来,深度学习(DL)技术也被纳入自动预测SCD。& # xD;本文献综述全面分析了用于预测SCD的ML和DL模型。该分析对心脏死亡的基本结构产生了有价值的见解,从ECG和HRV信号中提取相关特征,使用数据库,并评估分类器的性能。该综述对自动化SCD预测方法进行了简洁而彻底的研究,强调了当前的限制条件,并强调了进一步发展的必要性。它是一种宝贵的资源,为有抱负的SCD预测领域的学者提供了有价值的见解,并概述了潜在的研究方向。这些自动化方法已经证明了实现卓越预测准确度的潜力,达到了97%的水平,并且可以在30-70分钟的时间内预测SCD事件。尽管取得了这些有希望的成果,但对更高准确性和可靠性的追求仍在继续。虽然ML和DL方法已经显示出巨大的前景,但它们的性能与可用的训练数据量有着内在的联系。大多数预测模型依赖于小规模的数据库,这引起了人们对它们在现实场景中的适用性的担忧。此外,这些模型主要利用心电图和心率变异性信号,往往忽略了其他生理信号的潜在贡献。开发实时的、临床适用的模型也是进一步探索这一领域的关键途径。
{"title":"A systematic review of automated prediction of sudden cardiac death using ECG signals.","authors":"Preeti P Ghasad, Jagath V S Vegivada, Vipin M Kamble, Ankit A Bhurane, Nikhil Santosh, Manish Sharma, Ru-San Tan, U Rajendra Acharya","doi":"10.1088/1361-6579/ad9ce5","DOIUrl":"10.1088/1361-6579/ad9ce5","url":null,"abstract":"&lt;p&gt;&lt;p&gt;&lt;i&gt;Background&lt;/i&gt;. Sudden cardiac death (SCD) stands as a life-threatening cardiac event capable of swiftly claiming lives. It ranks prominently among the leading causes of global mortality, contributing to approximately 10% of deaths worldwide. The timely anticipation of SCD holds the promise of immediate life-saving interventions, such as cardiopulmonary resuscitation. However, recent strides in the realms of deep learning (DL), machine learning (ML), and artificial intelligence have ushered in fresh opportunities for the automation of SCD prediction using physiological signals. Researchers have devised numerous models to automatically predict SCD using a combination of diverse feature extraction techniques and classifiers. Methods: We conducted a thorough review of research publications ranging from 2011 to 2023, with a specific focus on the automated prediction of SCD. Traditionally, specialists utilize molecular biomarkers, symptoms, and 12-lead ECG recordings for SCD prediction. However, continuous patient monitoring by experts is impractical, and only a fraction of patients seeks help after experiencing symptoms. However, over the past two decades, ML techniques have emerged and evolved for this purpose. Importantly, since 2021, the studies we have scrutinized delve into a diverse array of ML and DL algorithms, encompassing K-nearest neighbors, support vector machines, decision trees, random forest, Naive Bayes, and convolutional neural networks as classifiers.&lt;i&gt;Results&lt;/i&gt;. This literature review presents a comprehensive analysis of ML and DL models employed in predicting SCD. The analysis provided valuable information on the fundamental structure of cardiac fatalities, extracting relevant characteristics from electrocardiogram (ECG) and heart rate variability (HRV) signals, using databases, and evaluating classifier performance. The review offers a succinct yet thorough examination of automated SCD prediction methodologies, emphasizing current constraints and underscoring the necessity for further advancements. It serves as a valuable resource, providing valuable insights and outlining potential research directions for aspiring scholars in the domain of SCD prediction.&lt;i&gt;Conclusions&lt;/i&gt;. In recent years, researchers have made substantial strides in the prediction of SCD by leveraging openly accessible databases such as the MIT-BIH SCD Holter and Normal Sinus Rhythm, which contains extensive 24 h recordings of SCD patients. These sophisticated methodologies have previously demonstrated the potential to achieve remarkable accuracy, reaching levels as high as 97%, and can forecast SCD events with a lead time of 30-70 min. Despite these promising outcomes, the quest for even greater accuracy and reliability persists. ML and DL methodologies have shown great promise, their performance is intrinsically linked to the volume of training data available. Most predictive models rely on small-scale databases, raising concerns about their appl","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142807683","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Physiological measurement
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1