Pub Date : 2025-08-11DOI: 10.1088/1361-6579/adf0be
Chenchen Tu, Shuwen Yang, Zhixiang Wang, Linqi Liu, Zhao Ma, Huan Zhang, Lanxin Feng, Bin Cai, Hongjia Zhang, Ming Ding, Xiantao Song
Objective.The potential of optical pumped magnetometer magnetocardiography (OPM-MCG) for diagnosing coronary artery disease (CAD) has been initially shown, yet lacks large-scale prospective research.Approach.Using invasive coronary angiography (ICA) as a reference, we constructed three feature sets for the development of machine learning (ML) models: a 'Heart' feature set consisting only of OPM-MCG features, a 'Clinical' feature set, and a 'Heart + Clinical' combined feature set. We assessed the performance of 11 ML models with 10-fold cross-validation and conducted a feature importance analysis.Main results and Significance. Among 1513 participants (mean age 58.2 ± 12.0 years, 75.5% male), 1194 (78.92%) tested positive for ICA. Significant differences were observed in 'Heart' and 'Clinical' features between ICA-positive and negative groups. ML models using only 'Heart' features (AUC 0.84-0.88) outperformed those using only 'Clinical' features (AUC 0.62-0.75). Combining both feature types improved diagnostic accuracy (AUC 0.75-0.90). Feature importance analysis highlighted that 'Significant change of Ar-PN' in OPM-MCG was key for ICA diagnosis (47.8%), along with 'Abnormal Sp-TT', 'Significant change of Ps-PN', and 'Abnormal Mg-TT'. OPM-MCG has high performance in diagnosing CAD, and the significant change of Ar-PN is the most important feature. Cat Boost and random forest are more suitable for OPM-MCG to build ML diagnostic models for CAD.
{"title":"Machine learning in diagnosing coronary artery disease via optical pumped magnetometer magnetocardiography: a prospective cohort study.","authors":"Chenchen Tu, Shuwen Yang, Zhixiang Wang, Linqi Liu, Zhao Ma, Huan Zhang, Lanxin Feng, Bin Cai, Hongjia Zhang, Ming Ding, Xiantao Song","doi":"10.1088/1361-6579/adf0be","DOIUrl":"10.1088/1361-6579/adf0be","url":null,"abstract":"<p><p><i>Objective.</i>The potential of optical pumped magnetometer magnetocardiography (OPM-MCG) for diagnosing coronary artery disease (CAD) has been initially shown, yet lacks large-scale prospective research.<i>Approach.</i>Using invasive coronary angiography (ICA) as a reference, we constructed three feature sets for the development of machine learning (ML) models: a 'Heart' feature set consisting only of OPM-MCG features, a 'Clinical' feature set, and a 'Heart + Clinical' combined feature set. We assessed the performance of 11 ML models with 10-fold cross-validation and conducted a feature importance analysis.<i>Main results and Significance</i>. Among 1513 participants (mean age 58.2 ± 12.0 years, 75.5% male), 1194 (78.92%) tested positive for ICA. Significant differences were observed in 'Heart' and 'Clinical' features between ICA-positive and negative groups. ML models using only 'Heart' features (AUC 0.84-0.88) outperformed those using only 'Clinical' features (AUC 0.62-0.75). Combining both feature types improved diagnostic accuracy (AUC 0.75-0.90). Feature importance analysis highlighted that 'Significant change of Ar-PN' in OPM-MCG was key for ICA diagnosis (47.8%), along with 'Abnormal Sp-TT', 'Significant change of Ps-PN', and 'Abnormal Mg-TT'. OPM-MCG has high performance in diagnosing CAD, and the significant change of Ar-PN is the most important feature. Cat Boost and random forest are more suitable for OPM-MCG to build ML diagnostic models for CAD.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-08-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144650127","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-08-08DOI: 10.1088/1361-6579/adf488
Miika Köykkä, Iida Laatikainen-Raussi, Sami Vierola, Neil J Cronin, Benjamin Waller, Tomi Vänttinen
Objectives.This study aimed to develop and validate a load cell-based device for measuring isometric forearm rotation torque and to determine its test-retest reliability.Approach.The custom-built device was calibrated using known weights and validated against a high-precision torque transducer. For reliability assessment, 35 physically active participants (20 males, 15 females; age 30 ± 7 years) were tested for isometric forearm pronation and supination strength 5-7 d apart.Main results.The custom device demonstrated excellent validity (intraclass correlation coefficient (ICC), absolute agreement = 1.00;r2= 1.00,p< 0.001; mean difference = -1.26-1.44%,p< 0.001). Test-retest reliability was excellent for absolute pronation and supination torque (ICC = 0.88-0.97; coefficient of variation percentage (CV%) = 4.1-5.6; minimal detectable change (MDC) at 90% confidence level = 13.1-19.9%), good to excellent for supination:pronation ratios (ICC = 0.60-0.88; CV% = 7.0-8.6; MDC = 0.10-0.13), and fair to good for dominant:non-dominant ratios (ICC = 0.42-0.66; CV% = 6.1-7.6; MDC = 0.07-0.10). Sex significantly influenced absolute torque values, with males demonstrating consistently higher torque, although reliability metrics were similar for both sexes.Significance.The device is valid, and the test is reliable. It is suitable for clinical assessments, rehabilitation monitoring, and performance evaluation, facilitating an improved understanding of factors affecting elbow overloading and injuries. Limb ratio metrics should be interpreted with caution due to their lower reliability.
{"title":"Development, validation and test-retest reliability of a load cell-based device for assessment of isometric forearm rotation torque.","authors":"Miika Köykkä, Iida Laatikainen-Raussi, Sami Vierola, Neil J Cronin, Benjamin Waller, Tomi Vänttinen","doi":"10.1088/1361-6579/adf488","DOIUrl":"10.1088/1361-6579/adf488","url":null,"abstract":"<p><p><i>Objectives.</i>This study aimed to develop and validate a load cell-based device for measuring isometric forearm rotation torque and to determine its test-retest reliability.<i>Approach.</i>The custom-built device was calibrated using known weights and validated against a high-precision torque transducer. For reliability assessment, 35 physically active participants (20 males, 15 females; age 30 ± 7 years) were tested for isometric forearm pronation and supination strength 5-7 d apart.<i>Main results.</i>The custom device demonstrated excellent validity (intraclass correlation coefficient (ICC), absolute agreement = 1.00;<i>r</i><sup>2</sup>= 1.00,<i>p</i>< 0.001; mean difference = -1.26-1.44%,<i>p</i>< 0.001). Test-retest reliability was excellent for absolute pronation and supination torque (ICC = 0.88-0.97; coefficient of variation percentage (CV%) = 4.1-5.6; minimal detectable change (MDC) at 90% confidence level = 13.1-19.9%), good to excellent for supination:pronation ratios (ICC = 0.60-0.88; CV% = 7.0-8.6; MDC = 0.10-0.13), and fair to good for dominant:non-dominant ratios (ICC = 0.42-0.66; CV% = 6.1-7.6; MDC = 0.07-0.10). Sex significantly influenced absolute torque values, with males demonstrating consistently higher torque, although reliability metrics were similar for both sexes.<i>Significance.</i>The device is valid, and the test is reliable. It is suitable for clinical assessments, rehabilitation monitoring, and performance evaluation, facilitating an improved understanding of factors affecting elbow overloading and injuries. Limb ratio metrics should be interpreted with caution due to their lower reliability.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144718314","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Objective.Various time domain features, including dicrotic notch (dic), in photoplethysmogram (PPG), and the pulse transit time (PTT) determined using the simultaneously recorded electrocardiogram (ECG), are believed to have a critical role with many potential clinical applications. However, the dependence of these parameters on PPG sensor location is less well known.Approach.Three transmissive pulse oximetry probes (Xhale) were put simultaneously on the ear, nose, and finger of 36 healthy volunteers in the lower body negative pressure (LBNP) experiment. Various features of the recorded PPG signals were analyzed across different LBNP phases for each location. Simultaneously recorded finger PPG and ECG (Nellcor) were used to assess the dependence of PTT on PPG sensor location.Main results.PPG signal quality varies by measurement site, with nasal PPG showing the highest quality and ear PPG the lowest. Except pulse rate (PR), most feature-related indices differ across sites. Specifically, the ratios of detectabledicvary, highest in finger PPG and lowest in nasal PPG. Whendicis detectable, theepoint anddicare significantly different. PR variability indices and PTT also vary by location, though no clear conclusions can be drawn about PTT behavior across different LBNP phases.Significance.Various indices derived from PPG signals in a well-controlled study environment are influenced by sensor placement. Although not all possible indices are examined, the findings clearly illustrate the sensitivity of signal features to measurement location. While these results may not be directly generalizable to routine clinical settings, caution is warranted when extrapolating findings from one PPG site to another. This consideration is especially important in the digital health era, where mobile devices with PPG sensors are increasingly deployed at diverse body sites.
{"title":"Comparison of feature-based indices derived from photoplethysmogram recorded from different body locations during lower body negative pressure.","authors":"Shrikant Chand, Neng-Tai Chiu, Yun-Hsin Chou, Aymen Alian, Kirk Shelley, Hau-Tieng Wu","doi":"10.1088/1361-6579/adf489","DOIUrl":"10.1088/1361-6579/adf489","url":null,"abstract":"<p><p><i>Objective.</i>Various time domain features, including dicrotic notch (<b>dic</b>), in photoplethysmogram (PPG), and the pulse transit time (PTT) determined using the simultaneously recorded electrocardiogram (ECG), are believed to have a critical role with many potential clinical applications. However, the dependence of these parameters on PPG sensor location is less well known.<i>Approach.</i>Three transmissive pulse oximetry probes (Xhale) were put simultaneously on the ear, nose, and finger of 36 healthy volunteers in the lower body negative pressure (LBNP) experiment. Various features of the recorded PPG signals were analyzed across different LBNP phases for each location. Simultaneously recorded finger PPG and ECG (Nellcor) were used to assess the dependence of PTT on PPG sensor location.<i>Main results.</i>PPG signal quality varies by measurement site, with nasal PPG showing the highest quality and ear PPG the lowest. Except pulse rate (PR), most feature-related indices differ across sites. Specifically, the ratios of detectable<b>dic</b>vary, highest in finger PPG and lowest in nasal PPG. When<b>dic</b>is detectable, the<i>e</i>point and<b>dic</b>are significantly different. PR variability indices and PTT also vary by location, though no clear conclusions can be drawn about PTT behavior across different LBNP phases.<i>Significance.</i>Various indices derived from PPG signals in a well-controlled study environment are influenced by sensor placement. Although not all possible indices are examined, the findings clearly illustrate the sensitivity of signal features to measurement location. While these results may not be directly generalizable to routine clinical settings, caution is warranted when extrapolating findings from one PPG site to another. This consideration is especially important in the digital health era, where mobile devices with PPG sensors are increasingly deployed at diverse body sites.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144718313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-08-02DOI: 10.1088/1361-6579/adf6fe
Sajjad Karimi, Masoud Nateghi, Gabriela I Cestero, Lina Sophie Chitadze, Deepanshi Sharma, Yi Yang, Juhee H Vyas, Chuoqi Chen, Zeineb Bouzid, Cem Okan Yaldiz, Nicholas Harris, Rachel Bull, Bradly Stone, Spencer K Lynn, Bethany K Bracken, Omer T Inan, James Douglas Bremner, Reza Sameni
Objective:
Depression is a prevalent mental health disorder that significantly impacts well-being and quality of life. This study investigates the relationship between depression and cardiovascular function, exploring time-series features derived from electrocardiogram (ECG) and photoplethysmogram (PPG) data as potential biomarkers for depression prescreening.
Approach:
As part of a comprehensive psycholinguistic experiment, we collected data from 60 individuals, including both healthy participants and those with varying levels of depression, assessed using the Beck Depression Inventory-II (BDI-II) and the Patient Health Questionnaire-9 (PHQ-9).
Bimodal features derived from both ECG and PPG data were used to develop machine learning models for depression risk classification, employing classifiers such as Random Forest, XGBoost, Logistic Regression, and Support Vector Machines (SVM). Additionally, regression models were built to predict depression severity based on ECG- and PPG-derived biomarkers.
Main Results:
Key findings indicate that short-term variability (SD1) features in the ECG RR interval, peripheral systolic and diastolic phases from the PPG, and pulse duration significantly differ between healthy individuals and those at risk of depression. SVM achieved the best classification performance, with an AUROC of 0.83 ± 0.11 for BDI-II-based classification and 0.78 ± 0.11 for PHQ-9-based classification. SHAP analysis consistently identified systolic-SD1 and RR-SD1 as key predictors. Regression analysis further supported the role of cardiovascular features in assessing depression severity, yielding a mean absolute error (MAE) of 10.18 for BDI-II and 5.27 for PHQ-9 score regression.
Significance:
This study demonstrates the feasibility of using wearable ECG and PPG technologies for depression prescreening. The findings suggest that cardiac activity-based biomarkers can contribute to the development of cost-effective, objective, and non-invasive tools for mental health assessment, complementing traditional diagnostic methods.
目的:抑郁症是一种普遍存在的心理健康障碍,显著影响幸福感和生活质量。本研究探讨了抑郁症与心血管功能之间的关系,探索从心电图(ECG)和光容积描记图(PPG)数据中获得的时间序列特征作为抑郁症预筛查的潜在生物标志物。作为综合心理语言学实验的一部分,我们收集了60个人的数据,包括健康的参与者和不同程度的抑郁者,使用贝克抑郁量表- ii (BDI-II)和患者健康问卷-9 (PHQ-9)进行评估。从ECG和PPG数据中获得的双峰特征被用于开发抑郁症风险分类的机器学习模型,采用随机森林、XGBoost、逻辑回归和支持向量机(SVM)等分类器。此外,基于ECG和PPG衍生的生物标志物建立回归模型来预测抑郁严重程度。主要结果:关键发现表明,健康个体和抑郁风险个体在ECG RR间期、PPG外周收缩期和舒张期以及脉冲持续时间方面的短期变异性(SD1)特征存在显著差异。SVM的分类效果最好,基于bdi - ii的分类AUROC为0.83±0.11,基于phq -9的分类AUROC为0.78±0.11。SHAP分析一致认为收缩期- sd1和RR-SD1是关键预测因子。回归分析进一步支持心血管特征在评估抑郁严重程度中的作用,BDI-II评分回归的平均绝对误差(MAE)为10.18,PHQ-9评分回归的平均绝对误差(MAE)为5.27。意义:本研究证明了使用可穿戴ECG和PPG技术进行抑郁预筛查的可行性。研究结果表明,基于心脏活动的生物标志物有助于开发成本效益高、客观、无创的心理健康评估工具,补充传统的诊断方法。
{"title":"Prescreening depression using wearable electrocardiogram and photoplethysmogram data from a psycholinguistic experiment.","authors":"Sajjad Karimi, Masoud Nateghi, Gabriela I Cestero, Lina Sophie Chitadze, Deepanshi Sharma, Yi Yang, Juhee H Vyas, Chuoqi Chen, Zeineb Bouzid, Cem Okan Yaldiz, Nicholas Harris, Rachel Bull, Bradly Stone, Spencer K Lynn, Bethany K Bracken, Omer T Inan, James Douglas Bremner, Reza Sameni","doi":"10.1088/1361-6579/adf6fe","DOIUrl":"https://doi.org/10.1088/1361-6579/adf6fe","url":null,"abstract":"<p><strong>Objective: </strong>
Depression is a prevalent mental health disorder that significantly impacts well-being and quality of life. This study investigates the relationship between depression and cardiovascular function, exploring time-series features derived from electrocardiogram (ECG) and photoplethysmogram (PPG) data as potential biomarkers for depression prescreening.

Approach: 
As part of a comprehensive psycholinguistic experiment, we collected data from 60 individuals, including both healthy participants and those with varying levels of depression, assessed using the Beck Depression Inventory-II (BDI-II) and the Patient Health Questionnaire-9 (PHQ-9). 

Bimodal features derived from both ECG and PPG data were used to develop machine learning models for depression risk classification, employing classifiers such as Random Forest, XGBoost, Logistic Regression, and Support Vector Machines (SVM). Additionally, regression models were built to predict depression severity based on ECG- and PPG-derived biomarkers.

Main Results: 
Key findings indicate that short-term variability (SD1) features in the ECG RR interval, peripheral systolic and diastolic phases from the PPG, and pulse duration significantly differ between healthy individuals and those at risk of depression. SVM achieved the best classification performance, with an AUROC of 0.83 ± 0.11 for BDI-II-based classification and 0.78 ± 0.11 for PHQ-9-based classification. SHAP analysis consistently identified systolic-SD1 and RR-SD1 as key predictors. Regression analysis further supported the role of cardiovascular features in assessing depression severity, yielding a mean absolute error (MAE) of 10.18 for BDI-II and 5.27 for PHQ-9 score regression.

Significance: 
This study demonstrates the feasibility of using wearable ECG and PPG technologies for depression prescreening. The findings suggest that cardiac activity-based biomarkers can contribute to the development of cost-effective, objective, and non-invasive tools for mental health assessment, complementing traditional diagnostic methods.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144768858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-31DOI: 10.1088/1361-6579/adece4
Mariah Sabioni, Jonas Willén, Seraina A Dual, Martin Jacobsson
Objectives.To quantify and evaluate the dynamic response of RR intervals (RRI) and heart rate (HR) measurements of commercially available Bluetooth chest-worn HR monitors during induced rapid changes in HR.Approach.An arbitrary function generator created synthetic electrocardiogram signals simulating the heart activity. Different scenarios of rapid changes in HR were simulated several times using: (1) step responses; (2) exercise data (EX); and (3) intermittent EX data. RRI and HR were recorded using the standard Bluetooth HR service for four wearable monitors: Garmin HRM-Dual, Movesense active, Polar H10, and Wahoo TRACKR. RRI latency, HR latency, and agreement were evaluated from the reference signal.Main results.RRI latency (median and interquartile range) was 0.7(0.5,0.7) s for Garmin, 0.4(0.2,0.5) s for Movesense, 2.6(2.2,2.8) s for Polar, and 2.1(1.9,2.4) s for Wahoo, where results did not differ greatly between tests. HR response latency was different between devices and tests. During intermittent EX tests, HR latency was 3.3(3.0, 3.3) s for Garmin, 1.0(1.0,1.0) s for Movesense, 2.3(2.3,2.3) s for Polar, and 2.2(2.2,2.3) s for Wahoo, where all devices consistently underestimated HR peaks and overestimated HR valleys, with a greater discrepancy in HR valleys.Significance.Most validation protocols of RRI and HR measured by wearable monitors neglect their dynamic characteristics. The present study demonstrated that manufacturers implemented different digital filters to compute the HR values, limiting the devices' ability to capture rapid HR changes. Open documentation of the processing steps is advised, and use cases involving sharp HR changes-such as intermittent high-intensity training-should rely on beat-to-beat RRI recordings.
{"title":"Dynamic response of Bluetooth wearable heart rate monitors during rapid changes in heart rate.","authors":"Mariah Sabioni, Jonas Willén, Seraina A Dual, Martin Jacobsson","doi":"10.1088/1361-6579/adece4","DOIUrl":"10.1088/1361-6579/adece4","url":null,"abstract":"<p><p><i>Objectives.</i>To quantify and evaluate the dynamic response of RR intervals (RRI) and heart rate (HR) measurements of commercially available Bluetooth chest-worn HR monitors during induced rapid changes in HR.<i>Approach.</i>An arbitrary function generator created synthetic electrocardiogram signals simulating the heart activity. Different scenarios of rapid changes in HR were simulated several times using: (1) step responses; (2) exercise data (EX); and (3) intermittent EX data. RRI and HR were recorded using the standard Bluetooth HR service for four wearable monitors: Garmin HRM-Dual, Movesense active, Polar H10, and Wahoo TRACKR. RRI latency, HR latency, and agreement were evaluated from the reference signal.<i>Main results.</i>RRI latency (median and interquartile range) was 0.7(0.5,0.7) s for Garmin, 0.4(0.2,0.5) s for Movesense, 2.6(2.2,2.8) s for Polar, and 2.1(1.9,2.4) s for Wahoo, where results did not differ greatly between tests. HR response latency was different between devices and tests. During intermittent EX tests, HR latency was 3.3(3.0, 3.3) s for Garmin, 1.0(1.0,1.0) s for Movesense, 2.3(2.3,2.3) s for Polar, and 2.2(2.2,2.3) s for Wahoo, where all devices consistently underestimated HR peaks and overestimated HR valleys, with a greater discrepancy in HR valleys.<i>Significance.</i>Most validation protocols of RRI and HR measured by wearable monitors neglect their dynamic characteristics. The present study demonstrated that manufacturers implemented different digital filters to compute the HR values, limiting the devices' ability to capture rapid HR changes. Open documentation of the processing steps is advised, and use cases involving sharp HR changes-such as intermittent high-intensity training-should rely on beat-to-beat RRI recordings.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144584545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-30DOI: 10.1088/1361-6579/adf1d3
Anni Zhao, Davood Fattahi, Xiao Hu
Physics-informed neural networks (PINNs) represent a transformative approach to data models by incorporating known physical laws into neural network training, thereby improving model generalizability, reduce data dependency, and enhance interpretability. Like many other fields in engineering and science, the analysis of physiological signals has been influenced by PINNs in recent years. This manuscript provides a comprehensive overview of PINNs from various perspectives in the physiological signal analysis domain. After exploring the literature and screening the search results, more than 40 key studies in the related domain are selected and categorized based on both practically and theoretically significant perspectives, including input data types, applications, physics-informed models, and neural network architectures. While the advantages of PINNs in tackling forward and inverse problems in physiological signal contexts are highlighted, challenges such as noisy inputs, computational complexity, loss function types, and overall model configuration are discussed, providing insights into future research directions and improvements. This work can serve as a guiding resource for researchers exploring PINNs in biomedical and physiological signal processing, paving the way for more precise, data-efficient, and clinically relevant solutions.
{"title":"Physics-informed neural networks for physiological signal processing and modeling: a narrative review.","authors":"Anni Zhao, Davood Fattahi, Xiao Hu","doi":"10.1088/1361-6579/adf1d3","DOIUrl":"10.1088/1361-6579/adf1d3","url":null,"abstract":"<p><p>Physics-informed neural networks (PINNs) represent a transformative approach to data models by incorporating known physical laws into neural network training, thereby improving model generalizability, reduce data dependency, and enhance interpretability. Like many other fields in engineering and science, the analysis of physiological signals has been influenced by PINNs in recent years. This manuscript provides a comprehensive overview of PINNs from various perspectives in the physiological signal analysis domain. After exploring the literature and screening the search results, more than 40 key studies in the related domain are selected and categorized based on both practically and theoretically significant perspectives, including input data types, applications, physics-informed models, and neural network architectures. While the advantages of PINNs in tackling forward and inverse problems in physiological signal contexts are highlighted, challenges such as noisy inputs, computational complexity, loss function types, and overall model configuration are discussed, providing insights into future research directions and improvements. This work can serve as a guiding resource for researchers exploring PINNs in biomedical and physiological signal processing, paving the way for more precise, data-efficient, and clinically relevant solutions.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-07-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12308510/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144668183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-30DOI: 10.1088/1361-6579/adf0bf
Ilaria Mentasti, Marta Carrara, Manuela Ferrario
Objective.The existing literature lacks a comprehensive analysis of the clinical evolution of septic patients, which is highly heterogeneous and patient-dependent. The aim of this study is to develop machine learning models capable of predicting the clinical evolution of septic patients and to evaluate the predictive ability of features.Approach. Data from intensive care unit septic patients were extracted from the freely available HiRID database and a comprehensive pipeline for time series analysis of critical care data was developed. Predictive models of cardiovascular deterioration (based on mean pressure and lactate values) and global organ dysfunction (based on SOFA score) were developed, and the addition of variability, such as entropies, cross-entropies and cross-correlation of heart rate and blood pressure (BP), was tested against the use of standard metrics alone.Main results.The best model achieved an area under the ROC curve value of 0.9671, with SOFA score values and trends being the most important features in the model, followed by features related to lactate, fluid balance, therapy and entropy values of BP.Significance.The results show that the dynamics of vital signs and their cross-coupling, as captured by the proposed variability indices, can provide additional insights into the physiological responses to the therapy administered.
{"title":"Predicting the clinical evolution of septic patients from routinely collected data and vital signs variability using machine learning.","authors":"Ilaria Mentasti, Marta Carrara, Manuela Ferrario","doi":"10.1088/1361-6579/adf0bf","DOIUrl":"10.1088/1361-6579/adf0bf","url":null,"abstract":"<p><p><i>Objective.</i>The existing literature lacks a comprehensive analysis of the clinical evolution of septic patients, which is highly heterogeneous and patient-dependent. The aim of this study is to develop machine learning models capable of predicting the clinical evolution of septic patients and to evaluate the predictive ability of features.<i>Approach</i>. Data from intensive care unit septic patients were extracted from the freely available HiRID database and a comprehensive pipeline for time series analysis of critical care data was developed. Predictive models of cardiovascular deterioration (based on mean pressure and lactate values) and global organ dysfunction (based on SOFA score) were developed, and the addition of variability, such as entropies, cross-entropies and cross-correlation of heart rate and blood pressure (BP), was tested against the use of standard metrics alone.<i>Main results.</i>The best model achieved an area under the ROC curve value of 0.9671, with SOFA score values and trends being the most important features in the model, followed by features related to lactate, fluid balance, therapy and entropy values of BP.<i>Significance.</i>The results show that the dynamics of vital signs and their cross-coupling, as captured by the proposed variability indices, can provide additional insights into the physiological responses to the therapy administered.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-07-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144650128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-29DOI: 10.1088/1361-6579/adece3
Stefan Borik, Marguerite L Gilmore, Antonio J Gonzales-Fiol, James W Biondi, Hau-Tieng Wu, Kirk H Shelley, Aymen A Alian
Objective.This study evaluates the potential of photoplethysmography imaging (PPGI) with automated facial tracking for detecting hemodynamic and autonomic changes induced by lower-body negative pressure (LBNP). The goal is to assess whether PPGI-derived facial perfusion variations are related with stroke volume (SV), systemic vascular resistance (SVR), heart rate variability (HRV), and autonomic responses to progressive hypovolemia.Approach.Twenty-four healthy adults (8 females, 16 males; aged 28.7 ± 3.5 years) underwent a seven-stage LBNP protocol (-15 to -60 mmHg, recovery). Facial perfusion was recorded using cross-polarized PPGI, along with SV, SVR, HR, and mean arterial pressure. Facial landmark tracking (MediaPipe) was used to extract region-specific PPGI signals. Wavelet synchrosqueezing transform enabled spectral analysis, and HRV was assessed with NeuroKit2.Main Results.At -60 mmHg, the LBNP-intolerant group showed a 25.2% decrease in SV (p< 0.0001) and a 19% increase in SVR (p= 0.041). At -30 mmHg recovery, SV remained reduced by 21% (p< 0.001), with SVR elevated by 30.1% (p= 0.002). In contrast, the tolerant group exhibited SV increases of 12% and 18% at these stages (bothp< 0.0001), and a HR reduction of up to 5% (p< 0.05), with a decreasing SVR trend. HRV analysis indicated greater sympathetic activation in the intolerant group, with reduced HF power (p= 0.037) and increased LF/HF ratio (3.5 at -60 mmHg,p= 0.020). First harmonic PPGI amplitudes significantly declined in the intolerant group, most notably in the cheeks (-44.2%,p= 0.005).Significance.These findings suggests that PPGI, combined with AI-based face tracking and wavelet analysis, enables non-invasive, spatially resolved monitoring of vascular and autonomic responses. PPGI differentiates tolerant and intolerant groups, supporting its potential for real-time cardiovascular assessment in critical care and emergency settings.
{"title":"Photoplethysmography imaging to assess facial perfusion under simulated hypovolemia.","authors":"Stefan Borik, Marguerite L Gilmore, Antonio J Gonzales-Fiol, James W Biondi, Hau-Tieng Wu, Kirk H Shelley, Aymen A Alian","doi":"10.1088/1361-6579/adece3","DOIUrl":"10.1088/1361-6579/adece3","url":null,"abstract":"<p><p><i>Objective.</i>This study evaluates the potential of photoplethysmography imaging (PPGI) with automated facial tracking for detecting hemodynamic and autonomic changes induced by lower-body negative pressure (LBNP). The goal is to assess whether PPGI-derived facial perfusion variations are related with stroke volume (SV), systemic vascular resistance (SVR), heart rate variability (HRV), and autonomic responses to progressive hypovolemia.<i>Approach.</i>Twenty-four healthy adults (8 females, 16 males; aged 28.7 ± 3.5 years) underwent a seven-stage LBNP protocol (-15 to -60 mmHg, recovery). Facial perfusion was recorded using cross-polarized PPGI, along with SV, SVR, HR, and mean arterial pressure. Facial landmark tracking (MediaPipe) was used to extract region-specific PPGI signals. Wavelet synchrosqueezing transform enabled spectral analysis, and HRV was assessed with NeuroKit2.<i>Main Results.</i>At -60 mmHg, the LBNP-intolerant group showed a 25.2% decrease in SV (<i>p</i>< 0.0001) and a 19% increase in SVR (<i>p</i>= 0.041). At -30 mmHg recovery, SV remained reduced by 21% (<i>p</i>< 0.001), with SVR elevated by 30.1% (<i>p</i>= 0.002). In contrast, the tolerant group exhibited SV increases of 12% and 18% at these stages (both<i>p</i>< 0.0001), and a HR reduction of up to 5% (<i>p</i>< 0.05), with a decreasing SVR trend. HRV analysis indicated greater sympathetic activation in the intolerant group, with reduced HF power (<i>p</i>= 0.037) and increased LF/HF ratio (3.5 at -60 mmHg,<i>p</i>= 0.020). First harmonic PPGI amplitudes significantly declined in the intolerant group, most notably in the cheeks (-44.2%,<i>p</i>= 0.005).<i>Significance.</i>These findings suggests that PPGI, combined with AI-based face tracking and wavelet analysis, enables non-invasive, spatially resolved monitoring of vascular and autonomic responses. PPGI differentiates tolerant and intolerant groups, supporting its potential for real-time cardiovascular assessment in critical care and emergency settings.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144584547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-28DOI: 10.1088/1361-6579/adf16e
Jiali Yuan, Sini He, Ling Sang, Zhanqi Zhao
Electrical impedance tomography (EIT) is an emerging imaging technology that has garnered increasing attention in recent years, particularly in the medical field and the diagnosis and treatment of respiratory diseases. Fascinating developments were achieved after the previous review focusing on clinical applications in Chinese hospitals. Over hundred publications in SCI journals related to thoracic EIT clinical research and daily applications have been recorded in the past five years. As EIT devices become more accessible and portable, clinical application scenarios include not only ICU, but also chronic disease management, and health screening. We were excited to welcome more than 10 local companies manufacturing their own EIT devices, which were exhibited during the 24th International Conference on Biomedical Applications of EIT in Hangzhou, China. This article systematically reviewed the applications of thoracic EIT in clinical research and routine use in Chinese hospitals over the past five years.
{"title":"Clinical applications of thoracic electrical impedance tomography in China: an updated review on recent 5 years.","authors":"Jiali Yuan, Sini He, Ling Sang, Zhanqi Zhao","doi":"10.1088/1361-6579/adf16e","DOIUrl":"10.1088/1361-6579/adf16e","url":null,"abstract":"<p><p>Electrical impedance tomography (EIT) is an emerging imaging technology that has garnered increasing attention in recent years, particularly in the medical field and the diagnosis and treatment of respiratory diseases. Fascinating developments were achieved after the previous review focusing on clinical applications in Chinese hospitals. Over hundred publications in SCI journals related to thoracic EIT clinical research and daily applications have been recorded in the past five years. As EIT devices become more accessible and portable, clinical application scenarios include not only ICU, but also chronic disease management, and health screening. We were excited to welcome more than 10 local companies manufacturing their own EIT devices, which were exhibited during the 24th International Conference on Biomedical Applications of EIT in Hangzhou, China. This article systematically reviewed the applications of thoracic EIT in clinical research and routine use in Chinese hospitals over the past five years.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144659878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-25DOI: 10.1088/1361-6579/adf0bd
Atallah Madi, Diego A Politis, Sina Salsabili, Adrian D C Chan
Objective.The mean linear intercept (MLI) is often used in lung morphometry; however, its assessment is labor-intensive, time-consuming, and prone to systematic biases when using the conventional indirect method. This study examines the inherent systematic biases in the indirect method, and explores the differences between the two methods, including how methodological parameters, such as the number of accepted field-of-view (FOV) images and guideline length, affect the measurement.Approach.We developed an automated MLI measurement system that uses a multiresolution semantic segmentation model. The system enables both indirect and direct MLI methods and allows for controlled variation of measurement parameters. The number of accepted FOVs was varied from 10 to 1000, and the guideline length from 39 to 702 pixels (19.4-349.5µm).Main results.The indirect method consistently overestimated MLI due to Septa Bias and Partial Chord Bias. The standard error of MLI decreases with more accepted FOV images, and the direct method consistently yielded a lower standard error than the indirect method. Short guideline lengths (<135.9µm) have a large impact on the indirect method, whereas the direct method is relatively insensitive to this parameter.Significance.The automated MLI measurement system improves the efficiency over human raters and enables higher precision by leveraging the advantages of the direct method (e.g. lower standard error, low sensitivity to guideline length) and the analysis of a larger number of FOV images. Moreover, the segmentation model used in the system is demonstrated to be accurate, which can facilitate the development of advanced morphometry techniques.
{"title":"Automated mean linear intercept measurement: quantifying bias and parameter sensitivity in lung morphometry.","authors":"Atallah Madi, Diego A Politis, Sina Salsabili, Adrian D C Chan","doi":"10.1088/1361-6579/adf0bd","DOIUrl":"10.1088/1361-6579/adf0bd","url":null,"abstract":"<p><p><i>Objective.</i>The mean linear intercept (MLI) is often used in lung morphometry; however, its assessment is labor-intensive, time-consuming, and prone to systematic biases when using the conventional indirect method. This study examines the inherent systematic biases in the indirect method, and explores the differences between the two methods, including how methodological parameters, such as the number of accepted field-of-view (FOV) images and guideline length, affect the measurement.<i>Approach.</i>We developed an automated MLI measurement system that uses a multiresolution semantic segmentation model. The system enables both indirect and direct MLI methods and allows for controlled variation of measurement parameters. The number of accepted FOVs was varied from 10 to 1000, and the guideline length from 39 to 702 pixels (19.4-349.5<i>µ</i>m).<i>Main results.</i>The indirect method consistently overestimated MLI due to Septa Bias and Partial Chord Bias. The standard error of MLI decreases with more accepted FOV images, and the direct method consistently yielded a lower standard error than the indirect method. Short guideline lengths (<135.9<i>µ</i>m) have a large impact on the indirect method, whereas the direct method is relatively insensitive to this parameter.<i>Significance.</i>The automated MLI measurement system improves the efficiency over human raters and enables higher precision by leveraging the advantages of the direct method (e.g. lower standard error, low sensitivity to guideline length) and the analysis of a larger number of FOV images. Moreover, the segmentation model used in the system is demonstrated to be accurate, which can facilitate the development of advanced morphometry techniques.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":2.3,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144650126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}