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Evaluation of a data-driven youngstock rearing quality system in Dutch dairy herds (2019–2022) 荷兰奶牛场数据驱动的幼畜饲养质量系统评估(2019-2022 年)
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-14 DOI: 10.1016/j.prevetmed.2024.106312
Cathérine E. Paarlberg, Anouk Veldhuis, Gustavo E. Monti, Lourens Heres, Thomas Dijkstra, Inge M.G.A. Santman-Berends

In recent years, the Netherlands exhibited an increased focus on improving youngstock rearing. Several data-driven tools were developed to assess and benchmark calf rearing practices based on key indicators, stimulate farmers to improve their youngstock rearing and reduce calf mortality. KalfOK is such a data-driven tool in which a farm-level overview with 15 indicators of youngstock rearing quality is communicated to participating farmers. In this study we assessed which farm characteristics are associated with A) a continuously high or low KalfOK score and B) frequent usage of KalfOK. Data from KalfOK and the identification and registration system were available for all participating herds over a period between 2019 and 2022 (Dataset A). Additionally, a sample of 324 dairy farmers, randomly selected from the entire Dutch dairy population (Dataset B), participated in a voluntary survey. Multivariable (logistic) regression models were used to A) identify differences in characteristics between farms with a continuously high- and farms with a continuously low KalfOK score and B) assess which farm characteristics were associated with frequent use of the KalfOK report. The results of analysis A showed multiple factors associated with having a low or high KalfOK score, including replacement rate, closed farming system, limited growth in herd size and the region where a farm was located. Sociological factors might also partly explain the difference between high and low scoring farms. Analysis B showed that approximately half of the surveyed farmers indicated that they do not frequently use their KalfOK overview in their calf rearing management. The KalfOK score of farmers who regularly use their KalfOK report was higher – and consequently better - compared to the KalfOK score of farmers who sometimes or never use KalfOK. Additionally, farmers using a milk robot and those discussing KalfOK regularly with their veterinarian, used KalfOK more often. Thirty four percent of the surveyed farmers made adjustments to their youngstock rearing management since the start of participation. The study’s insights into patterns in KalfOK utilization and associations with farm characteristics provide valuable information for ongoing efforts to enhance calf rearing practices via the use of KalfOK. It is important to consider what is needed to convince farmers that do not use the KalfOK tool to frequently start using their KalfOK report. Future research incorporating sociological aspects can provide a more comprehensive understanding of other dynamics influencing calf rearing and contribute valuable insights for enhancing the effectiveness of programs like KalfOK in promoting calf health and welfare.

近年来,荷兰越来越重视改善幼畜饲养。荷兰开发了几种数据驱动工具,根据关键指标对犊牛饲养方法进行评估和设定基准,激励农场主改进幼畜饲养,降低犊牛死亡率。KalfOK 就是这样一种数据驱动工具,其中包含 15 项幼畜饲养质量指标的农场概览将传达给参与的农场主。在本研究中,我们评估了哪些农场特征与 A) KalfOK 分数持续偏高或偏低以及 B) 经常使用 KalfOK 相关。KalfOK 和识别与登记系统提供了 2019 年至 2022 年期间所有参与牧场的数据(数据集 A)。此外,从整个荷兰奶牛场中随机抽取的 324 个奶牛场主样本(数据集 B)参加了自愿调查。多变量(逻辑)回归模型用于:A)确定 KalfOK 分数持续较高的牧场与持续较低的牧场之间的特征差异;B)评估哪些牧场特征与频繁使用 KalfOK 报告有关。分析 A 的结果显示,有多种因素与 KalfOK 分数的高低相关,包括替代率、封闭式养殖系统、牛群规模增长有限以及牧场所在地区。社会因素也可部分解释高分和低分牧场之间的差异。分析 B 显示,约有一半的受访牧场主表示,他们在犊牛饲养管理中并不经常使用 KalfOK 综述。与偶尔或从不使用 KalfOK 的牧场主相比,经常使用 KalfOK 报告的牧场主的 KalfOK 得分更高,因此得分也更高。此外,使用挤奶机器人和定期与兽医讨论 KalfOK 的牧场主使用 KalfOK 的频率更高。34%的受访牧场主自参与研究以来,对其幼畜饲养管理进行了调整。本研究对 KalfOK 的使用模式以及与牧场特征的关联进行了深入分析,为通过使用 KalfOK 不断改进犊牛饲养方法提供了宝贵信息。重要的是要考虑如何说服不使用 KalfOK 工具的农场主经常使用其 KalfOK 报告。结合社会学方面的未来研究可以更全面地了解影响犊牛饲养的其他动态因素,并为提高 KalfOK 等项目在促进犊牛健康和福利方面的有效性提供有价值的见解。
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引用次数: 0
Risk factors for the introduction of Salmonella spp. serogroups B and D into Dutch dairy herds 荷兰奶牛场引入沙门氏菌 B 和 D 血清群的风险因素
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.prevetmed.2024.106313
N.D. Fabri , I.M.G.A. Santman-Berends , M.F. Weber , G. van Schaik

Salmonella spp. infections in animals are a concern due to their zoonotic nature, welfare effects and economic impact on the livestock industry. To enable targeted surveillance, it is important to identify risk factors for the introduction of Salmonella spp. in a herd. Since 2009, Dutch dairy processors require herds delivering milk to their plants to participate in a Salmonella programme. In this programme, bulk milk is tested three times a year (i.e. test rounds) by ELISA on presence of antibodies against Salmonella spp. serogroups B and D. Based on these bulk milk results we identified newly infected herds, and aimed to identify associated risk factors. Effects of putative risk factors for becoming newly infected were studied using a multivariable population average logistic regression (PA-GEE) model with binomial distribution. Per test round in 2019–2021, 0.85–4.10 % of the Dutch dairy herds at risk became newly infected, with large regional differences. Several risk factors for becoming newly infected in the context of the low herd-level prevalence were identified. The most evident risk factors that were identified were having at least one infected or recently recovered dairy herd within 500 m (OR = 2.67), on-farm presence of pigs (OR = 1.63), introduction of more than 2 cattle from other herds in the previous 12 months (OR = 1.17), being in an area with a relative soil moisture of >0.54 % (OR = 1.31), being located in an area with a high water surface area (>2 %; OR = 1.14) and a larger herd size (OR = 1.65). These results indicate that, in addition to introduction of cattle, local transmission plays an important role in the between-herd transmission of Salmonella spp. Information on risk factors for becoming newly infected based on regularly collected data, can be used to improve surveillance and to implement targeted control measures against salmonellosis.

由于沙门氏菌的人畜共患病性质、对福利的影响以及对畜牧业的经济影响,动物感染沙门氏菌令人担忧。为了能够进行有针对性的监控,必须确定牛群中引入沙门氏菌的风险因素。自 2009 年起,荷兰乳品加工商要求向其工厂交付牛奶的牧场参与沙门氏菌计划。根据这些散装牛奶的检测结果,我们确定了新感染的牛群,并旨在确定相关的风险因素。使用二项分布的多变量人群平均逻辑回归(PA-GEE)模型研究了新感染的假定风险因素的影响。在 2019-2021 年的每一轮检测中,0.85%-4.10% 的荷兰高风险奶牛群成为新感染者,地区差异较大。在牛群感染率较低的情况下,发现了一些新感染的风险因素。最明显的风险因素是 500 米范围内至少有一个受感染或最近恢复的奶牛群(OR = 2.67)、农场内有猪(OR = 1.63)、在过去 12 个月中从其他牛群引进 2 头以上的牛(OR = 1.17)、所在地区的土壤相对湿度为 >0.54 %(OR = 1.31)、所在地区的水面面积较大(>2 %; OR = 1.14)以及牛群规模较大(OR = 1.65)。这些结果表明,除引进牛群外,本地传播在沙门氏菌属疾病的畜群间传播中也发挥着重要作用。 根据定期收集的数据获得新感染风险因素的信息,可用于改进监测和实施有针对性的沙门氏菌病控制措施。
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引用次数: 0
Global seroprevalence and factors associated with seropositivity for feline immunodeficiency virus (FIV) in cats: A systematic review and meta-analysis 猫免疫缺陷病毒 (FIV) 全球血清阳性率及相关因素:系统回顾与荟萃分析
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.prevetmed.2024.106315
José Artur Brilhante Bezerra , Clécio Henrique Limeira , Ana Carolina Pontes de Miranda Maranhão , João Marcelo Azevedo de Paula Antunes , Sérgio Santos de Azevedo

The feline immunodeficiency virus (FIV) is a retrovirus of the Lentivirus genus, distributed worldwide, that causes persistent infection with a significant impact on the cats’ health. Due to the importance of this infection in feline medicine, this pioneering study aimed to obtain an integrated estimate of the global seroprevalence of FIV in cats and to characterize the factors associated with this infection. Four electronic databases were screened for observational studies with FIV seroprevalence in cats published globally for this systematic review and meta-analysis. The initial search method returned 873 studies, of which 113 met all predefined criteria and were therefore included in this review. Meta-analysis with general data was performed, and a combined global seropositivity of 9.43 % (95 % CI: 8.24 % – 10.78 %) was found. Seropositivity was 14.34 % (95 % CI = 10.92 % – 18.61 %) in Asia, 11.90 % (95 % CI = 9.82 % – 14.34 %) in Oceania, 10.90 % (95 % CI = 5.71 % – 19.82 %) in Central America, 9.43 % (95 % CI = 6.95 % – 12.66 %) in South America, 9 % (95 % CI = 0 – 80 %) in Africa, 8.98 % (95 % CI = 7.31 % – 10.98 %) in Europe, and 5.93 % (95 % CI = 4.33 % – 8.07 %) in North America. Meta-analysis of factors associated with seropositivity demonstrated that FIV seroprevalence was higher in male (Prevalence ratio [PR] = 2.53, 95 % CI = 2.16 – 2.95), adult (PR = 2.83, 95 % CI = 2.24 – 3.56), unowned status (PR = 1.47, 95 % CI = 1.07 – 2.03), sick status (PR = 2.46, 95 % CI = 1.97 – 3.06), and cats with outdoor access (PR = 4.38, 95 % CI = 2.26 – 8.47). The results demonstrated that FIV is globally distributed and has a high seroprevalence in some geographical areas. Information compiled from this research is relevant to understanding the worldwide epidemiology of FIV. It presents the potential to contribute to the planning of strategies focused on controlling and reducing cases in cat populations.

猫免疫缺陷病毒(FIV)是慢病毒属的一种逆转录病毒,分布于世界各地,会造成持续性感染,对猫的健康产生重大影响。鉴于这种感染在猫科动物医学中的重要性,这项开创性的研究旨在对全球猫科动物的 FIV 血清流行率进行综合评估,并确定与这种感染相关的因素。为了进行这项系统综述和荟萃分析,我们在四个电子数据库中筛选了全球范围内发表的关于猫科动物 FIV 血清流行率的观察性研究。最初的搜索方法返回了 873 项研究,其中 113 项符合所有预定义标准,因此被纳入本综述。对一般数据进行了元分析,发现全球血清阳性率合计为 9.43 %(95 % CI:8.24 % - 10.78 %)。亚洲的血清阳性率为 14.34 %(95 % CI = 10.92 % - 18.61 %),大洋洲为 11.90 %(95 % CI = 9.82 % - 14.34 %),中美洲为 10.90 %(95 % CI = 5.71 % - 19.82 %),非洲为 9.43 %(95 % CI = 6.95 % - 12.66 %),非洲为 9 %(95 % CI = 0 - 80 %),欧洲为 8.98 %(95 % CI = 7.31 % - 10.98 %),北美洲为 5.93 %(95 % CI = 4.33 % - 8.07 %)。对血清阳性相关因素的 Meta 分析表明,FIV 血清阳性率在男性(患病率比 [PR] = 2.53,95 % CI = 2.16 - 2.95)、成年(患病率比 = 2.83,95 % CI = 2.24 - 3.56)、无主状态(PR = 1.47,95 % CI = 1.07 - 2.03)、患病状态(PR = 2.46,95 % CI = 1.97 - 3.06)和可在户外活动的猫(PR = 4.38,95 % CI = 2.26 - 8.47)。研究结果表明,FIV分布于全球,在某些地区血清流行率很高。这项研究收集的信息有助于了解 FIV 在全球的流行情况。它有可能有助于规划以控制和减少猫群中病例为重点的战略。
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引用次数: 0
Salmonella Prevalence and antibiotic resistance profile in raw poultry meat sold in North Lebanon: Insights from the COVID-19 pandemic and economic crisis 黎巴嫩北部出售的生禽肉中的沙门氏菌流行率和抗生素耐药性概况:从 COVID-19 大流行和经济危机中获得的启示。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-05 DOI: 10.1016/j.prevetmed.2024.106299
Sara Khalife , Dima El Safadi

Salmonella-related foodborne illness is a significant public health concern, with the primary source of human infection being animal-based food products, particularly chicken meat. Lebanon is currently experiencing a dual crisis: the COVID-19 pandemic and an unprecedented economic crisis, which has resulted in substantial challenges to the public health system and food safety. This study aims to assess the prevalence and antibiotic resistance profile of Salmonella in raw poultry meat sold in North Lebanon during this dual crisis. A cross-sectional study was carried out between May 2021 and April 2022 across six different districts in North Lebanon. A total of 288 whole, unprocessed chickens were examined. The isolation and identification of Salmonella isolates were done based on cultural and biochemical properties. All isolates were subjected to antimicrobial susceptibility testing and phenotypic assays for Extended-Spectrum Beta-lactamase (ESBL) detection. The prevalence of Salmonella in raw poultry meat purchased in North Lebanon reached 18.05 % (52/288). The dry season and chilled chicken were significantly associated with an increased risk of Salmonella contamination (P < 0.05). Additionally, 34.61 % of the isolates were potential ESBL producers, and 57.69 % exhibited multidrug resistance (MDR). This study highlights the existence of MDR in chicken meat in North Lebanon, posing a potential health risk if undercooked chicken meat is consumed. This emphasizes the importance of the implementation of preventive strategies and hygienic procedures throughout the food chain to reduce the risk of Salmonella spp. contamination in chicken meats and its potential transmission to humans.

与沙门氏菌相关的食源性疾病是一个重大的公共卫生问题,人类感染的主要来源是动物性食品,尤其是鸡肉。黎巴嫩目前正经历着双重危机:COVID-19 大流行和前所未有的经济危机,这给公共卫生系统和食品安全带来了巨大挑战。本研究旨在评估在这场双重危机中黎巴嫩北部出售的生禽肉中沙门氏菌的流行率和抗生素耐药性概况。这项横断面研究于 2021 年 5 月至 2022 年 4 月在黎巴嫩北部的六个不同地区进行。共检测了 288 只未经加工的整鸡。根据培养和生化特性对沙门氏菌分离物进行了分离和鉴定。对所有分离物进行抗菌药敏感性测试和表型测定,以检测广谱β-内酰胺酶(ESBL)。在黎巴嫩北部购买的生禽肉中,沙门氏菌的流行率达到 18.05 %(52/288)。旱季和冰鲜鸡肉与沙门氏菌污染风险增加有明显关联(P < 0.05)。此外,34.61%的分离菌株可能产生 ESBL,57.69%的分离菌株表现出多药耐药性(MDR)。这项研究表明,黎巴嫩北部的鸡肉中存在耐多药菌株,如果食用未煮熟的鸡肉,将对健康造成潜在威胁。这强调了在整个食物链中实施预防策略和卫生程序的重要性,以降低鸡肉中沙门氏菌污染的风险及其向人类传播的可能性。
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引用次数: 0
Seroprevalence of canid alphaherpesvirus-1 and associated risk factors in domestic dogs in North Queensland, Australia 澳大利亚北昆士兰家犬中犬科阿尔法疱疹病毒-1 的血清流行率及相关风险因素。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.prevetmed.2024.106304
C.J. Joonè , B. Gummow , P.F. Horwood

Canid alphaherpesvirus-1 (CaHV-1) may cause a highly fatal haemorrhagic disease in neonatal pups and is associated with reproductive, respiratory and ocular disease in older dogs. Although assumed to have a world-wide distribution, there have been few reports of CaHV-1 in Australia. The aim of this study was to investigate the seroprevalence of CaHV-1 in household dogs in a residential suburb in Townsville, as well as in dogs attending two dog shows in the region. Study participants were recruited through door-to-door non-probability sampling (Douglas dogs, n = 185) or invited to participate (Show dogs; n = 76). Dog owners completed a questionnaire that investigated possible risk factors for recent exposure to CaHV-1. A serum sample from each dog was assayed for anti-CaHV-1 antibodies using a commercially available ELISA. Associations between seropositive dogs and owner-reported risk factors were analysed using univariable analysis and multivariable logistic regression models. The seroprevalence of CaHV-1 was 11.4 % (95 % CI 6.8–15.9 %) and 17.1 % (95 % CI 5.5–28.8) for the Douglas and Show dogs, respectively, with a pooled seroprevalence of 13 % (95 % CI 8.3–17.7 %). Dogs that had suffered from conjunctivitis within the previous 3 months or were involved in breeding were more likely to be seropositive to CaHV-1. No other significant risk factors were identified. In conclusion, CaHV-1 is circulating in dogs in North Queensland and may be contributing to foetal and neonatal losses in this region.

犬α疱疹病毒-1(CaHV-1)可能会导致新生幼犬患上高度致命的出血性疾病,并与老年犬的生殖系统、呼吸系统和眼部疾病有关。虽然 CaHV-1 被认为分布于世界各地,但在澳大利亚却鲜有报道。本研究的目的是调查汤斯维尔市郊住宅区的家犬以及参加该地区两个犬展的犬只中 CaHV-1 的血清流行率。研究参与者是通过上门非概率抽样(道格拉斯犬,n = 185)或邀请参与(表演犬,n = 76)的方式招募的。狗主人填写了一份调查问卷,调查近期接触 CaHV-1 的可能风险因素。使用市售的酶联免疫吸附法对每只狗的血清样本进行抗 CaHV-1 抗体检测。使用单变量分析和多变量逻辑回归模型分析了血清阳性犬只与主人报告的风险因素之间的关联。道格拉斯犬和表演犬的 CaHV-1 血清阳性率分别为 11.4 %(95 % CI 6.8-15.9%)和 17.1 %(95 % CI 5.5-28.8),总血清阳性率为 13 %(95 % CI 8.3-17.7%)。在过去 3 个月内患过结膜炎或参与过繁殖的狗更有可能对 CaHV-1 呈血清阳性反应。没有发现其他重要的风险因素。总之,CaHV-1 在北昆士兰的犬只中流行,可能是造成该地区胎儿和新生儿死亡的原因之一。
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引用次数: 0
A public health campaign to increase awareness of the risk of dog bites in South Australia 在南澳大利亚开展公共卫生运动,提高人们对狗咬人风险的认识。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.prevetmed.2024.106298
Susan J. Hazel , Ivan Iankov

Dog bites are a serious public health problem. A campaign by the Dog and Cat Management Board of South Australia was launched to increase awareness that any dog can bite as a first step in reducing the incidence of dog bites. The aims of this study were to 1) evaluate changes in attitudes to dog bites following the media campaign, and 2) provide baseline data on dog bites and attitudes to interactions with dogs to help target future campaigns. The media campaign ‘Good Dogs Have Bad Days’ was run from July to October, 2023, using TV, radio, billboards and social media. A cross-sectional survey was conducted pre- and post-campaign, including demographics and questions relating to interactions and attitudes to dogs. A total of n = 402 to the pre- and n = 404 responses to the post-campaign surveys were received, with most having owned a dog, living in metropolitan areas, and an equal split of males and females. Over one third (36–37 %) of dog owners and 25–29 % of non-dog owners had been previously bitten by a dog, although most did not require medical attention. Respondents were more likely to agree that any dog can bite if they recalled seeing the campaign, and less likely if they were male and had poor knowledge of the scenarios in which a dog might bite. Older respondents and those from lower socioeconomic areas believed dog bites were a more serious community issue than younger respondents from higher socioeconomic areas. Approximately 70 % of dog owners believed it was safe for strangers to approach their dog, 34–37 % allowed children or other people to pat their dog without permission and less than half separated their dog from visitors or delivery people. In contrast few of the non-dog owners allowed their children to pat a dog without the owner’s permission and only 2 % allowed them to play with dogs without supervision. The results demonstrate a relatively short campaign was associated with increased agreement any dog can bite. The proportion of respondents who had been bitten by a dog affirms the importance of public health campaigns targeting dog attacks. Some behaviours, such as supervising dogs around children and keeping dogs separate from delivery people, had relatively low agreement from dog owners and may be targeted in future campaigns. Public awareness campaigns and ongoing education will help to increase safer interactions with dogs, but it will take time and commitment to achieve a result.

狗咬人是一个严重的公共卫生问题。南澳大利亚猫狗管理委员会发起了一场运动,旨在提高人们对任何狗都可能咬人的认识,以此作为减少狗咬人事件的第一步。这项研究的目的是:1)评估媒体宣传活动后人们对狗咬人事件的态度变化;2)提供狗咬人事件的基线数据以及人们对与狗互动的态度,以帮助确定未来宣传活动的目标。2023 年 7 月至 10 月期间,通过电视、广播、广告牌和社交媒体开展了 "好狗也有倒霉的时候 "媒体宣传活动。在活动前后进行了一次横向调查,包括人口统计数据以及与狗的互动和态度有关的问题。共收到 402 份活动前调查问卷和 404 份活动后调查问卷,其中大多数人都养过狗,居住在大都市地区,男女比例相当。超过三分之一(36-37%)的养狗者和 25-29% 的非养狗者曾被狗咬伤,但大多数人无需就医。如果受访者回忆起曾看到过宣传活动,则更有可能同意任何狗都可能咬人的说法;如果受访者是男性,且对狗可能咬人的情况知之甚少,则更不可能同意这一说法。与来自社会经济水平较高地区的年轻受访者相比,年龄较大和来自社会经济水平较低地区的受访者认为狗咬人是一个更为严重的社区问题。大约 70% 的养狗者认为陌生人接近他们的狗是安全的,34-37% 的养狗者允许孩子或其他人在未经允许的情况下拍打他们的狗,不到一半的养狗者将他们的狗与访客或送货人分开。相比之下,很少有不养狗的人允许他们的孩子在没有狗主人允许的情况下拍狗,只有 2% 的人允许他们的孩子在没有监督的情况下与狗玩耍。结果表明,相对较短的宣传活动与更多人同意任何狗都可能咬人有关。曾被狗咬伤的受访者比例肯定了针对狗咬人的公共卫生运动的重要性。一些行为,如在儿童身边看管好狗以及将狗与送货人分开饲养等,狗主人的认同度相对较低,可能是未来宣传活动的目标。提高公众意识的活动和持续的教育将有助于加强与狗的安全互动,但这需要时间和决心才能取得成效。
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引用次数: 0
Amplification of avian influenza virus circulation along poultry marketing chains in Bangladesh: A controlled field experiment 孟加拉国家禽销售链中禽流感病毒循环的扩大:受控现场实验。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.prevetmed.2024.106302
Lisa Kohnle , Tridip Das , Md. Helal Uddin , Sanjib Chandra Nath , Md. Abu Shoieb Mohsin , Rashed Mahmud , Paritosh Kumar Biswas , Md. Ahasanul Hoque , Dirk Udo Pfeiffer , Guillaume Fournié

The prevalence of avian influenza viruses is commonly found to increase dramatically as birds are transported from farms to live bird markets. Viral transmission dynamics along marketing chains are, however, poorly understood. To address this gap, we implemented a controlled field experiment altering chicken supply to a live bird market in Chattogram, Bangladesh. Broilers and backyard chickens traded along altered (intervention) and conventional (control) marketing chains were tested for avian influenza viruses at different time points. Upon arrival at the live bird market, the odds of detecting avian influenza viruses did not differ between control and intervention groups. However, 12 h later, intervention group odds were lower, particularly for broilers, indicating that viral shedding in live bird markets resulted partly from infections occurring during transport and trade. Curtailing avian influenza virus prevalence in live bird markets requires mitigating risk in marketing chain nodes preceding chickens’ delivery at live bird markets.

禽流感病毒的流行通常会随着禽鸟从农场运往活禽市场而急剧增加。然而,人们对营销链上的病毒传播动态却知之甚少。为了填补这一空白,我们在孟加拉国的查托格拉姆(Chattogram)活禽市场实施了一项改变鸡肉供应的现场对照实验。我们在不同的时间点对改变(干预)和传统(对照)销售链上交易的肉鸡和散养鸡进行了禽流感病毒检测。到达活禽市场时,对照组和干预组检测到禽流感病毒的几率没有差别。然而,12 小时后,干预组的几率较低,尤其是肉鸡,这表明活禽市场的病毒脱落部分是由运输和交易过程中发生的感染造成的。要遏制禽流感病毒在活禽市场的流行,就必须降低活禽市场交付鸡只之前的营销链节点风险。
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引用次数: 0
Nested PCR effective to detect low viral loads of SARS-CoV-2 in animal samples 巢式 PCR 可有效检测动物样本中的低病毒载量 SARS-CoV-2。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-02 DOI: 10.1016/j.prevetmed.2024.106303
Carlos Javier Panei , Nadia Analía Fuentealba , María Emilia Bravi , Gastón Moré , Natalia Brasso

SARS-CoV-2 emerged from an animal source and was then transmitted to humans, causing the COVID-19 pandemic. Since a wide range of animals are susceptible to SARS-CoV-2 infection, the zoonotic potential of SARS-CoV-2 increases with every new animal infected. The molecular gold standard assay for SARS-CoV-2 detection is real-time RT-PCR, where the Ct obtained is proportional to the amount of nucleic acid and can be a semi-quantitative measure of the viral load. However, since the use of real-time RT-PCR assays in animal samples is low due to the high costs, the use of validated nested PCR assays will help to monitor large-scale animal samplings, by reducing the costs of detection. In the present study, 140 samples from dogs and cats (15 SARS-CoV-2-positive samples with Ct values from 27 to 33, and 125 negative samples), previously analyzed by real-time RT-PCR, were analyzed by nested PCR. To increase the number of positive samples to determine the sensitivity of the assay, 40 human samples obtained during COVID-19 diagnosis in 2020 were included. The specificity of the primers was analyzed against samples positive to canine coronavirus (CCV) and feline infectious peritonitis virus (FIPV). To calculate the limit of detection (LoD) of the nested PCR, the viral load was estimated extrapolating the Ct value obtained by real-time RT-PCR. The Ct values obtained were considered as semi-quantitative and were able to distinguish between high, moderate and low viral loads. The Kappa value or “agreement” between assays and reliability of the nested PCR were also determined. Eleven of the animal samples analyzed by nested PCR targeting the N gene were detected as positive, while 129 were detected as negative to the virus, with Ct values ranging between17 and 31.5. All the samples from humans analyzed by nested PCR were positive. These results indicate that the assay has a sensitivity of near 95 % and a specificity of 100 %. No unspecific reactions analyzed by nested PCR were observed with the samples positive to CCV and FIPV. The samples detected as positive to SARS-CoV-2 by nested PCR were those that presented a Ct between17 and 31.5. The LoD of the nested PCR was estimated close to 50 copies/µL of viral load, corresponding with a Ct of 31.5. The Kappa value between assays was excellent (k = 0.829). The results obtained demonstrate that nested PCR is useful to detect SARS-CoV-2 low viral loads at a lower cost than with real-time RT-PCR.

SARS-CoV-2 从动物源头出现,然后传播给人类,引发了 COVID-19 大流行。由于多种动物都可能感染 SARS-CoV-2,因此每有一种动物感染,SARS-CoV-2 的人畜共患可能性就会增加。检测 SARS-CoV-2 的分子金标准检测方法是实时 RT-PCR,获得的 Ct 与核酸量成正比,可作为病毒载量的半定量测量方法。然而,由于实时 RT-PCR 检测成本较高,在动物样本中的使用率较低,因此使用经过验证的巢式 PCR 检测方法将有助于监测大规模动物样本,降低检测成本。在本研究中,使用巢式 PCR 分析了 140 份猫狗样本(其中 15 份为 SARS-CoV-2 阳性样本,Ct 值在 27 到 33 之间,125 份为阴性样本),这些样本之前曾使用实时 RT-PCR 分析。为了增加阳性样本的数量以确定该检测方法的灵敏度,2020 年 COVID-19 诊断期间获得的 40 份人类样本也被纳入其中。针对犬冠状病毒(CCV)和猫传染性腹膜炎病毒(FIPV)阳性样本分析了引物的特异性。为了计算巢式 PCR 的检测限(LoD),根据实时 RT-PCR 获得的 Ct 值推算病毒载量。获得的 Ct 值被认为是半定量的,能够区分高、中、低病毒载量。此外,还测定了 Kappa 值或检测方法之间的 "一致性 "以及巢式 PCR 的可靠性。通过针对 N 基因的巢式 PCR 分析,有 11 份动物样本检测出病毒呈阳性,129 份检测出病毒呈阴性,Ct 值介于 17 和 31.5 之间。通过巢式 PCR 分析的所有人类样本均呈阳性。这些结果表明,该检测方法的灵敏度接近 95%,特异性达到 100%。在对 CCV 和 FIPV 呈阳性的样本中,没有发现通过巢式 PCR 分析的非特异性反应。通过巢式 PCR 检测出对 SARS-CoV-2 呈阳性的样本是那些 Ct 值在 17 和 31.5 之间的样本。据估计,巢式 PCR 的 LoD 接近 50 拷贝/微升病毒载量,对应的 Ct 为 31.5。检测之间的 Kappa 值非常好(k = 0.829)。结果表明,与实时 RT-PCR 相比,巢式 PCR 能以更低的成本检测低病毒载量的 SARS-CoV-2。
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引用次数: 0
Benchmarking analysis of computer vision algorithms on edge devices for the real-time detection of digital dermatitis in dairy cows 对用于实时检测奶牛数字皮炎的边缘设备上的计算机视觉算法进行基准分析。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-02 DOI: 10.1016/j.prevetmed.2024.106300
Srikanth Aravamuthan, Emil Walleser, Dörte Döpfer

Digital dermatitis (DD) is a bovine claw disease responsible for ulcerative lesions on the coronary band of the foot. It causes significant animal welfare and economic losses to the cattle industry. Early detection of DD can lead to prompt treatment and decrease lameness. Current detection and staging methods require a trained individual to evaluate the interdigital space on each foot for clinical signs of DD. Computer vision (CV), a type of artificial intelligence for image analysis, has demonstrated promising results on object detection tasks. However, farms require robust solutions that can be deployed in harsh conditions including dust, debris, humidity, precipitation, other equipment issues. The study aims to train, deploy, and benchmark DD detection models on edge devices. Images were collected from commercial dairy farms with the camera facing the interdigital space on the plantar surface of the foot. Images were scored for M-stages of DD by a trained investigator using the M-stage DD classification system. Models were trained to detect and score DD lesions and embedded on an edge device. The Tiny YOLOv4 model deployed on a CV specific integrated camera module connected to a single board computer achieved a mean average precision (mAP) of 0.895, an overall prediction accuracy of 0.873, and a Cohen’s kappa of 0.830 for agreement between the computer vision model and the trained investigator. The model reached a final inference speed of 40 frames per second (FPS) and ran stably without any interruptions. The CV model was able to detect DD lesions on an edge device with high performance and speed. The CV tool can be used for early detection and prompt treatment of DD in dairy cows. Real-time detection of DD on edge device will improve health outcomes, while simultaneously decreasing labor costs. We demonstrate that the deployed model can be a low-power and portable solution for real-time detection of DD on dairy farms. This result is a step towards applying CV algorithms to veterinary medicine and implementing real-time detection of health outcomes in precision farming.

数字皮炎(DD)是一种牛爪病,会导致牛脚冠状带出现溃疡性病变。它对动物福利和养牛业造成重大经济损失。及早发现 DD 可以及时治疗并减少跛行。目前的检测和分期方法需要训练有素的人员对每只脚的趾间隙进行评估,以发现 DD 的临床症状。计算机视觉(CV)是一种用于图像分析的人工智能,已在物体检测任务中取得了可喜的成果。然而,农场需要能够在恶劣条件下部署的强大解决方案,包括灰尘、碎片、湿度、降水和其他设备问题。本研究旨在对边缘设备上的 DD 检测模型进行训练、部署和基准测试。研究人员从商业化奶牛场采集了图像,并将摄像头对准脚掌表面的趾间空间。训练有素的研究人员使用 M 阶段 DD 分类系统对图像进行 M 阶段 DD 评分。对模型进行了检测和评分训练,并将其嵌入边缘设备。Tiny YOLOv4 模型部署在与单板计算机相连的 CV 专用集成相机模块上,其平均精确度 (mAP) 为 0.895,总体预测准确度为 0.873,计算机视觉模型与训练有素的研究人员之间的柯恩卡帕 (Cohen's kappa) 为 0.830。该模型的最终推理速度为每秒 40 帧(FPS),运行稳定,没有出现任何中断。计算机视觉模型能够高性能、高速度地检测边缘设备上的 DD 病变。CV工具可用于奶牛DD的早期检测和及时治疗。在边缘设备上实时检测 DD 将改善健康状况,同时降低劳动力成本。我们证明,部署的模型可以成为奶牛场实时检测 DD 的低功耗便携式解决方案。这一成果是将 CV 算法应用于兽医学和在精准农业中实现健康结果实时检测迈出的一步。
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引用次数: 0
Maternal transmission of Small Ruminant Lentivirus has no epidemiological importance 小反刍兽慢病毒的母体传播在流行病学上并不重要。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-08-02 DOI: 10.1016/j.prevetmed.2024.106297
Andrew W. Illius , Nicholas J. Savill

The relative importance of maternal and horizontal transmission of small ruminant lentivirus (SRLV), the causative organism in maedi-visna, is poorly understood. Review of the literature shows that maternal transmission is inefficient, infecting only about 10–25 % of the lambs of infected ewes. Theory proves that maternal transmission alone cannot achieve the rates of transmission that would be required to start or maintain an outbreak. Maternal and horizontal transmission are additive in effect, and we use modelling to show that maternal transmission does not amplify or enhance prevalence in the presence of horizontal transmission. Taking steps to avoid maternal transmission by rearing lambs without infected maternal colostrum does have a role in producing a clean flock, but has no significance for the control of a disease outbreak if the conditions for horizontal transmission are present. Efforts to prevent disease by reducing the spread of SRLV must be focussed on minimising horizontal transmission.

人们对小反刍兽疫的病原体--小反刍兽疫慢病毒(SRLV)的母体传播和水平传播的相对重要性知之甚少。文献综述表明,母源传播的效率很低,受感染母羊的羔羊中只有约 10-25% 会受到感染。理论证明,仅靠母体传播无法达到引发或维持疫情所需的传播率。母源传播和水平传播的效果是相加的,我们通过建模表明,在存在水平传播的情况下,母源传播不会扩大或提高流行率。采取措施避免母源传播,饲养没有感染母源初乳的羔羊,确实可以培养出干净的羊群,但如果存在水平传播的条件,则对控制疾病爆发没有意义。通过减少 SRLV 传播来预防疾病的工作必须侧重于尽量减少水平传播。
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引用次数: 0
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Preventive veterinary medicine
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