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Effects of gonadectomy on the incidence rate of babesiosis and the risk of severe babesiosis in dogs aged 6 months and older at a veterinary academic hospital in South Africa: A case-control and retrospective cohort study 性腺切除术对南非一家兽医学术医院中 6 个月及以上犬类巴贝西亚原虫病发病率和严重巴贝西亚原虫病风险的影响:病例对照和回顾性队列研究。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-20 DOI: 10.1016/j.prevetmed.2024.106293
Darryn L. Knobel , Josef Hanekom , Maria C. van den Bergh , Andrew L. Leisewitz

Gonadectomy in dogs is associated with changes in risks of a variety of non-infectious health conditions, but few studies have examined its effects on infectious disease outcomes. The objectives of our study were to estimate the causal effect of gonadectomy on the incidence rate of babesiosis diagnosis, and on the risk of severe babesiosis in diagnosed cases, in dogs 6 months and older seen at a veterinary academic hospital in South Africa from 2013 through 2020. To estimate the effect of gonadectomy on the incidence rate of babesiosis diagnosis in dogs, we conducted a case-control study with incidence density sampling of dogs seen through the hospital’s primary care service, adjusting for sex, age, breed category and weight. We identified 811 cases and selected 3244 time-matched controls. To estimate the effect of gonadectomy on disease severity in dogs with babesiosis, we conducted a retrospective cohort study among all dogs with a diagnosis of babesiosis (n=923), including these 811 cases and a further 112 referred to the hospital, also adjusting for sex, age, breed category and weight. Gonadectomy substantially reduced the incidence rate of babesiosis (total effect incidence rate ratio [IRR] 0.5; 95 % confidence interval [CI] 0.41–0.60) and the risk of severe babesiosis among diagnosed dogs (total effect risk ratio [RR] 0.72; 95 % CI 0.60–0.86). Tipping point sensitivity analysis shows that these effect estimates are robust to unmeasured confounding bias. There was no evidence for modification of the effect of gonadectomy by sex, with effect estimates qualitatively similar for males and females for both outcomes. Compared to females, males had a higher incidence rate of babesiosis (IRR 1.74; 95 % CI 1.49–2.04) and a higher risk of severe disease (RR 1.12; 95 % CI 0.98–1.28). In conclusion, our study shows a robust protective effect of gonadectomy on the incidence and severity of babesiosis in both male and female dogs 6 months of age and older, and contributes important evidence to the debate on the overall risks and benefits of gonadectomy to dogs in this population.

狗的性腺切除术与各种非传染性健康状况的风险变化有关,但很少有研究探讨其对传染病结果的影响。我们的研究目的是估算性腺切除术对巴贝虫诊断发病率的因果影响,以及对2013年至2020年期间在南非一家兽医学术医院就诊的6个月及以上犬只中确诊病例中严重巴贝虫病风险的因果影响。为了估算性腺切除术对狗巴贝西亚原虫病诊断发病率的影响,我们对通过医院初级保健服务就诊的狗进行了发病密度抽样病例对照研究,并对性别、年龄、品种类别和体重进行了调整。我们确定了 811 个病例,并选择了 3244 个时间匹配的对照组。为了估算性腺切除术对巴贝西亚原虫病犬疾病严重程度的影响,我们对所有确诊为巴贝西亚原虫病的犬只进行了回顾性队列研究(923 只),其中包括这 811 例病例和另外 112 只转诊到医院的犬只,同样对性别、年龄、犬种类别和体重进行了调整。性腺切除术大大降低了巴贝西亚原虫病的发病率(总效应发病率比 [IRR] 0.5;95 % 置信区间 [CI] 0.41-0.60),并降低了确诊病犬患严重巴贝西亚原虫病的风险(总效应风险比 [RR] 0.72;95 % 置信区间 [CI] 0.60-0.86)。临界点敏感性分析表明,这些效应估计值对未测量的混杂偏差具有稳健性。没有证据表明性腺切除术的效果会因性别而改变,男性和女性对两种结果的效果估计值在性质上相似。与女性相比,男性巴贝西亚原虫病的发病率更高(IRR 1.74;95 % CI 1.49-2.04),患严重疾病的风险更高(RR 1.12;95 % CI 0.98-1.28)。总之,我们的研究表明,性腺切除术对 6 月龄及以上公犬和母犬巴贝西亚原虫病的发病率和严重程度都有很强的保护作用,并为关于性腺切除术对这一人群的总体风险和益处的讨论提供了重要证据。
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引用次数: 0
Development and use of Biocheck.UGent™ scoring system to quantify biosecurity in conventional indoor (turkey, duck, breeder) and free-range (layer and broiler) poultry farms 开发和使用 Biocheck.UGent™ 评分系统,量化传统室内(火鸡、鸭、种鸡)和散养(蛋鸡和肉鸡)家禽养殖场的生物安全。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-20 DOI: 10.1016/j.prevetmed.2024.106288
Arthi Amalraj , Hilde Van Meirhaeghe , Nele Caekebeke , Rhea Creve , Anne-Christine Dufay-Lefort , Nathalie Rousset , Annick Spaans , Aitor Devesa , Giuditta Tilli , Alessandra Piccirillo , Artur Żbikowski , László Kovács , Ilias Chantziaras , Jeroen Dewulf

To assess and enhance the application of biosecurity measures in poultry farming, an objective measurement tool (Biocheck.UGent™) was already available for broiler and layer. This study describes the development, validation and application of a risk-based weighted scoring tool for breeder, turkey, duck, free-range layer and free-range broiler production. In collaboration with an expert panel (n= 38), five different questionnaires were developed, following the format of the existing Biocheck.UGent scoring tools. Weights were attributed to external (7–9 subcategories) and internal (3–4 subcategories) biosecurity categories, as well as to the corresponding individual questions within each subcategory. The biosecurity measures were prioritized and weighed based on their relative importance in preventing disease transmission. Upon completion of the questionnaire, and upload of all answers to the Biocheck.UGent website, the algorithm generates a biosecurity score varying between ‘’0’’ which equals the total absence of any biosecurity measure up to ‘’100’’ which refers to full application of all biosecurity measures. The final scoring systems are available online (https://biocheckgent.com/en) for free and have been used to assess biosecurity in 70 breeders, 100 turkeys, 23 ducks, 16 free-range broilers, and 15 free-range layer farms originating from 12 countries so far. On average, the overall biosecurity score (mean ± std. dev) was 78 ± 7 % for breeders, 73 ± 11 % for turkeys, 71 ± 8 % for ducks, 73 ± 8 % for free-range layers and 70 ± 13 % for free-range broilers. There were significant differences (p < 0.05) in biosecurity (both at the overall and subcategory levels) across different poultry types. The overall farm biosecurity score for breeders was significantly higher than that for turkey (p <.001) and duck production (p = 0.001). External biosecurity levels were highest in breeders in comparison to turkeys (p < 0.001), ducks (p = 0.008) and broiler free-range (p = 0.005). There was a notable difference in internal biosecurity levels between duck and turkey (p = 0.041) production as well. The study contributed to the poultry biosecurity database which allows benchmarking of the biosecurity levels of the users’ farm results to national or international averages, indicating room for improvement and aiding to motivate stakeholders to enhance their biosecurity levels.

为了评估和加强家禽饲养中生物安全措施的应用,已经有一种用于肉鸡和蛋鸡的客观测量工具(Biocheck.UGent™)。本研究介绍了针对种鸡、火鸡、鸭、散养蛋鸡和散养肉鸡生产的基于风险的加权评分工具的开发、验证和应用。与专家小组(38 人)合作,按照现有 Biocheck.UGent 评分工具的格式,开发了五种不同的问卷。外部(7-9 个子类别)和内部(3-4 个子类别)生物安全类别以及每个子类别中相应的单个问题都被赋予了权重。根据生物安全措施在预防疾病传播方面的相对重要性,对其进行了优先排序和权衡。完成问卷调查并将所有答案上传到 Biocheck.UGent 网站后,算法会生成一个生物安全得分,得分介于 "0 "和 "100 "之间,"0 "表示完全没有采取任何生物安全措施,"100 "表示完全采取了所有生物安全措施。最终评分系统可在网上(https://biocheckgent.com/en)免费查阅,迄今已用于评估来自 12 个国家的 70 个种鸡场、100 个火鸡场、23 个鸭场、16 个散养肉鸡场和 15 个散养蛋鸡场的生物安全状况。平均而言,种鸡的总体生物安全得分(平均值 ± 标准差)为 78 ± 7%,火鸡为 73 ± 11%,鸭为 71 ± 8%,散养蛋鸡为 73 ± 8%,散养肉鸡为 70 ± 13%。不同类型家禽的生物安全(总体和子类水平)存在明显差异(p < 0.05)。种鸡的总体农场生物安全得分明显高于火鸡(P<0.05)。
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引用次数: 0
Prediction and transmission analysis of bluetongue disease in China 中国蓝耳病的预测和传播分析
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-19 DOI: 10.1016/j.prevetmed.2024.106290
Junjie Zhong , Erlian Shu , Shuwen Zhang , Qiaoling Yang , Qin Chen , Bing Niu

Bluetongue disease is an infectious disease transmitted by Culicoides as vectors, mainly infecting ruminants. Because ruminants play an important role in animal husbandry in China, the outbreak of bluetongue disease can cause serious economic losses. Maxent model was applied to predict the distribution of bluetongue in China based on the data derived from domestic and foreign academic literature databases including CNKI, Wanfang Database, PubMed, Web of Science and Google Scholar. The results showed that annual mean temperature (BIO1), precipitation in driest month (BIO14), sheep density (SD) and altitude (Elev) were the relevant variables of bioclimatic suitable zones for bluetongue disease. Precipitation in wettest month (BIO13), BIO1, BIO14, Elev were the main variables affecting the habitat of the bluetongue vector Culicoides. The most suitable climate for bluetongue infection occurs in southern China, central China and parts of Xinjiang. The suitable living areas of Culicoides are mainly located in southern, central and eastern China, and the overlap of the two suitable areas is high. The study suggested that southern, central, and eastern China are high-risk areas for bluetongue due to the significant overlap of suitable habitats for both the disease and its vector. Implementing effective surveillance and targeted control strategies in these regions is crucial for mitigating the impact of bluetongue disease.

蓝耳病是一种以蜱为媒介传播的传染病,主要感染反刍动物。由于反刍动物在中国畜牧业中占有重要地位,蓝舌病的爆发会造成严重的经济损失。根据 CNKI、万方数据库、PubMed、Web of Science 和 Google Scholar 等国内外学术文献数据库中的数据,应用 Maxent 模型预测了蓝舌病在中国的分布。结果表明,年平均气温(BIO1)、最旱月降水量(BIO14)、羊群密度(SD)和海拔高度(Elev)是蓝耳病生物气候适宜区的相关变量。最潮湿月份的降水量(BIO13)、BIO1、BIO14、海拔高度是影响蓝舌病媒介Culicoides栖息地的主要变量。华南、华中和新疆部分地区的气候最适宜蓝舌病的感染。蓝舌病媒介Culicoides的适宜生活区主要分布在华南、华中和华东地区,且两个适宜区的重叠度较高。研究表明,华南、华中和华东地区是蓝舌病的高风险地区,这是因为蓝舌病及其病媒的适宜栖息地高度重叠。在这些地区实施有效的监测和有针对性的控制策略对于减轻蓝耳病的影响至关重要。
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引用次数: 0
Association between non-esterified fatty acids and calcium concentrations at calving with early lactation clinical diseases, fertility and culling in grazing dairy cows in Uruguay 乌拉圭放牧奶牛产犊时的非酯化脂肪酸和钙浓度与泌乳早期临床疾病、繁殖力和淘汰之间的关系
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-19 DOI: 10.1016/j.prevetmed.2024.106294
Irene Cruz , Joaquín Barca , Isabel Pereira , Ana Meikle , Gretel Ruprechter

This study describes the association of non-esterified fatty acids (NEFA) and calcium concentrations at calving with early lactation disease, reproductive performance and culling in 646 dairy cows from 13 commercial grazing dairy herds in Uruguay. During one year, health events were recorded from calving to 30 days in milk (DIM). The first author visited each farm every 20 days. During each visit, body condition score (BCS) was recorded (scale 1–5), defining BCS < 3 as suboptimal and BCS > 3 as optimal, and a blood sample was taken from cows between 0 and 4 DIM for metabolite determination. To evaluate the association between health events (i.e., retained placenta-metritis and clinical mastitis) and risk factors (parity, BCS, high NEFA (> 0.6 mmol/L) and subclinical hypocalcemia (SCH) (< 2.10 mM)) data were analysed using multivariable logistic regression models. To evaluate the association of health events and risk factors with reproductive performance and culling, data were analysed using Cox proportional hazard regression models. A risk factor and an outcome of interest were assumed to be associated at P < 0.05 and a tendency to be associated was defined at P < 0.10. Overall, 47 % (n = 303) of the cows showed elevated NEFA concentration and 77 % (n = 499) had SCH. In addition, 21.5 % (n = 139) of the cows recorded at least one clinical disease. Cumulative incidence was 17 % (n = 109) for clinical mastitis, 4.2 % (n = 27) for retained placenta (RP)-metritis and 1.4 % (n = 7) for lameness. Clinical mastitis was associated with parity, with lower odds in primiparous (PP) cows (OR = 0.42, P < 0.01). Cows in an optimal BCS also tended to have lower odds (OR = 0.66, P = 0.07). Moreover, high NEFA and SCH cows had higher odds of CM (OR = 4.5, P = 0.01 and OR = 1.75, P = 0.04, respectively). Retained placenta-metritis tended to be associated with high NEFA concentration (OR = 2.2, P = 0.06). Primiparous cows with suboptimal BCS showed an increased first insemination rate (HR = 2.34; P < 0.01). The risk of culling was lower in PP cows (HR = 0.19; P < 0.01) and in cows with optimal BCS and low NEFA concentration (HR = 0.38; P = 0.03). Our data show that metabolic challenge (defined as peripartum suboptimal BCS, high NEFA or SCH) is associated with increased odds of clinical mastitis and RP-metritis, decreased probability of insemination and increased hazard of culling. Under grazing conditions, we suggest that farm management to improve the metabolic adaptation to lactation represents an opportunity to enhance cow performance in terms of health, fertility and longevity.

这项研究描述了产犊时非酯化脂肪酸(NEFA)和钙浓度与泌乳早期疾病、繁殖性能和淘汰的关系,研究对象是来自乌拉圭13个商业放牧奶牛场的646头奶牛。在一年的时间里,记录了从产犊到产奶 30 天(DIM)的健康事件。第一作者每 20 天访问一次每个牧场。在每次访问期间,记录体况评分(BCS)(1-5 级),将 BCS < 3 定义为亚理想状态,BCS > 3 定义为理想状态。为了评估健康事件(即胎盘滞留-甲状腺炎和临床乳腺炎)与风险因素(奇数、BCS、高NEFA(> 0.6 mmol/L)和亚临床低钙血症(SCH)(< 2.10 mM))之间的关系,使用多变量逻辑回归模型对数据进行了分析。为了评估健康事件和风险因素与繁殖性能和淘汰的关系,使用 Cox 比例危险回归模型对数据进行了分析。假设风险因素与相关结果的相关性为 P <0.05,相关趋势为 P <0.10。总体而言,47%(n = 303)的奶牛显示 NEFA 浓度升高,77%(n = 499)的奶牛患有 SCH。此外,21.5%(n = 139)的奶牛至少患有一种临床疾病。临床乳腺炎的累计发病率为 17 %(n = 109),胎盘残留(RP)-甲状腺炎的累计发病率为 4.2 %(n = 27),跛足的累计发病率为 1.4 %(n = 7)。临床乳腺炎与胎次有关,初产(PP)奶牛发生乳腺炎的几率较低(OR = 0.42,P < 0.01)。处于最佳BCS的奶牛发生几率也较低(OR = 0.66,P = 0.07)。此外,高 NEFA 和 SCH 奶牛发生 CM 的几率更高(OR = 4.5,P = 0.01 和 OR = 1.75,P = 0.04)。胎盘残留性子宫炎往往与高NEFA浓度有关(OR = 2.2,P = 0.06)。BCS不达标的初产母牛首次授精率增加(HR = 2.34; P < 0.01)。PP奶牛的淘汰风险较低(HR = 0.19; P < 0.01),BCS最佳但NEFA浓度较低的奶牛的淘汰风险也较低(HR = 0.38; P = 0.03)。我们的数据表明,代谢挑战(定义为围产期BCS不达标、NEFA浓度高或SCH)与临床乳腺炎和RP-甲状腺炎几率增加、授精几率降低和淘汰风险增加有关。我们认为,在放牧条件下,改善泌乳期新陈代谢适应性的牧场管理是提高奶牛健康、繁殖力和寿命的良机。
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引用次数: 0
Anomaly detection in the veterinary antibiotic prescription surveillance system (IS ABV) 兽用抗生素处方监控系统(IS ABV)中的异常检测。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-19 DOI: 10.1016/j.prevetmed.2024.106291
Guy-Alain Schnidrig , Anaïs Léger , Heinzpeter Schwermer , Rebecca Furtado Jost , Dagmar Heim , Gertraud Schüpbach-Regula

Antibiotic resistance is one of the major concerns in veterinary and human medicine and poses a considerable threat to both human and animal health. It has been shown that over- or misuse of antibiotics is one of the primary drivers of antibiotic resistance. To develop the surveillance of antibiotic use, Switzerland introduced the "Informationssystem Antibiotika in der Veterinärmedizin" (IS ABV) in 2019, mandating electronic registration of antibiotic prescriptions by all veterinarians in Switzerland. However, initial data analysis revealed a considerable amount of implausible data entries, potentially compromising data quality and reliability. These anomalies may be caused by input errors, inaccuracies, incorrect or aberrant master data or data transmission and make analysis impossible. To address this issue efficiently, we propose a two-stage anomaly detection framework utilizing machine learning algorithms. In this study, our primary focus was on cattle treatments with either single or group therapy, as they were the species with the highest prescription volume. However, not all outliers are necessarily incorrect; some may be legitimate but unusual antibiotic treatments. Thus, expert review plays a crucial role in distinguishing outliers, that are correct from actual errors. Initially, relevant prescription variables were extracted and pre-processed with a custom-built scaler. A set of unsupervised algorithms calculated the probability of each data point and identified the most likely outliers. In collaboration with experts, we annotated anomalies and established anomaly thresholds for each production type and active substance. These expert-annotated labels were then used to fine-tune the final supervised classification algorithms. With this methodology, we identified 22,816 anomalies from a total of 1,994,170 prescriptions in cattle (1.1 %). Cattle with no further specified production type had the most (2 %) anomalies with 7758 out of 379,995. The anomalies were consistently identified and comprised prescriptions with too high and too low dosages. Random Forest achieved a ROC-AUC score of 0.994, (95 % CI: 0.992, 0.995) and a F1-Score of 0.962 (95 % CI: 0.958, 0.966) for single treatments. The versatility of this framework allows its adaptation to other species within IS ABV and potentially to other prescription-based surveillance systems. If applied regularly to uploaded prescriptions, it should reduce input errors over time, improving the validity of the data in the long term.

抗生素耐药性是兽医和人类医学关注的主要问题之一,对人类和动物的健康都构成了相当大的威胁。研究表明,过度或滥用抗生素是产生抗生素耐药性的主要原因之一。为加强对抗生素使用情况的监控,瑞士于 2019 年引入了 "兽医抗生素信息系统"(IS ABV),强制要求瑞士所有兽医对抗生素处方进行电子注册。然而,初步数据分析显示,有相当多的数据条目难以置信,可能会影响数据质量和可靠性。这些异常可能由输入错误、不准确、不正确或异常的主数据或数据传输造成,导致无法进行分析。为有效解决这一问题,我们提出了一个利用机器学习算法的两阶段异常检测框架。在这项研究中,我们主要关注的是采用单一疗法或集体疗法的牛治疗,因为它们是处方量最高的品种。然而,并非所有异常值都是错误的;有些可能是合法但不寻常的抗生素治疗。因此,专家审查在区分异常值(正确与实际错误)方面起着至关重要的作用。最初,相关处方变量被提取出来,并通过定制的标度器进行预处理。一套无监督算法计算出每个数据点的概率,并识别出最有可能的异常值。通过与专家合作,我们对异常情况进行了标注,并为每种生产类型和活性物质设定了异常阈值。这些由专家标注的标签随后被用于微调最终的监督分类算法。通过这种方法,我们从总共 1,994,170 份牛处方中识别出 22,816 个异常点(1.1%)。没有进一步指定生产类型的牛的异常情况最多(2%),在 379,995 份处方中发现了 7758 份。异常情况被一致识别出来,包括剂量过高和过低的处方。随机森林的 ROC-AUC 得分为 0.994(95 % CI:0.992,0.995),单一疗法的 F1 得分为 0.962(95 % CI:0.958,0.966)。该框架的多功能性使其适用于 IS ABV 中的其他物种,并有可能适用于其他基于处方的监控系统。如果定期对上传的处方进行应用,随着时间的推移,它应该会减少输入错误,从而提高数据的长期有效性。
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引用次数: 0
The impact of the bluetongue serotype 3 outbreak on sheep and goat mortality in the Netherlands in 2023 蓝舌病血清 3 型爆发对 2023 年荷兰绵羊和山羊死亡率的影响
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-19 DOI: 10.1016/j.prevetmed.2024.106289
I.M.G.A. Santman-Berends , K.M.J.A. van den Brink , E. Dijkstra , G. van Schaik , M.A.H. Spierenburg , R. van den Brom

In September 2023, bluetongue virus serotype 3 (BTV-3) emerged in the Netherlands, infecting over five thousand livestock farms. In sheep, high morbidity and mortality rates were reported that were unlike previously described bluetongue outbreaks. This study aimed to quantify the impact of BTV-3 in the small ruminant population in the Netherlands in 2023. Sheep and goat movement census data and BTV-3 notification data were available from 2020 until the end of 2023. Data were aggregated to farm and week level and mortality indicators were calculated for lambs (<1 year) and adult animals (≥1 year). Population averaged GEE models with a Negative-binomial distribution and a log-link function correcting for repeated measures per farm in time were used to quantify the association between BTV-3 and mortality. In 2023, 2994 sheep farmers and 89 goat farmers notified clinical signs of BTV-3 to the NVWA. During this BTV-3 outbreak period, an additional 55,000 sheep died compared to the same period in 2020–2022. At flock level a high variety in mortality was observed, with a clear increase in mortality in both flocks that were not notified but that were located in infected areas and in flocks of which the farmer notified clinical signs. During the BTV-3 outbreak period, mortality in infected areas increased 4.2 (95 % CI: 4.0–4.3) times in sheep lambs (<1 year) and 4.6 (95 % CI: 4.4–4.8) times in sheep (≥1 year) compared to BTV-3 free areas. Flocks with a confirmed BTV-3 infection that were notified in September showed a 12.8 (95 % CI: 11.4–14.3) times higher mortality in lambs and a 15.1 (95 % CI: 13.7–16.6) times higher mortality in sheep compared to flocks in BTV-3 areas. In flocks of which the farmer notified clinical signs after September, mortality was 4.6 (95 % CI: 4.2–5.0) and 5.6 (95 % CI: 5.1–6.0) times higher in lambs and sheep compared BTV-3 areas respectively. In goats, around 4000 additional deaths were recorded during the BTV-3 outbreak period. In farms that were notified, mortality of goats (≥1 year) was 1.8 (95 % CI: 1.2–2.8) times higher compared to BTV-3 free areas. Since May 2024, multiple BTV-3 vaccines are available in the Netherlands. In June 2024, the first new infections of BTV-3 were confirmed in Dutch sheep flocks. Hopes are that with the possibility to vaccinate, the spread and impact of BTV-3 in the Netherlands will rapidly decline and that losses as observed in 2023 will no longer be seen.

2023 年 9 月,荷兰出现了蓝舌病病毒血清型 3 (BTV-3),五千多个畜牧场受到感染。据报道,绵羊的发病率和死亡率都很高,这与之前描述的蓝舌病疫情不同。本研究旨在量化 BTV-3 在 2023 年对荷兰小型反刍动物种群的影响。从 2020 年到 2023 年底,绵羊和山羊的移动普查数据和 BTV-3 通知数据均可获得。数据汇总到农场和周一级,并计算了羔羊(<1 岁)和成年动物(≥1 岁)的死亡率指标。采用负二项分布的种群平均 GEE 模型和校正每个牧场在时间上重复测量的对数链接函数来量化 BTV-3 与死亡率之间的关系。2023 年,2994 个绵羊养殖户和 89 个山羊养殖户向国家兽医局通报了 BTV-3 的临床症状。在 BTV-3 爆发期间,与 2020-2022 年同期相比,又有 55,000 只羊死亡。在羊群层面,观察到的死亡率变化很大,未通报但位于疫区的羊群和养殖户通报了临床症状的羊群死亡率都明显增加。在 BTV-3 爆发期间,与无 BTV-3 地区相比,疫区绵羊羔羊(1 岁)死亡率增加了 4.2 倍(95 % CI:4.0-4.3),绵羊(≥1 岁)死亡率增加了 4.6 倍(95 % CI:4.4-4.8)。与 BTV-3 地区的羊群相比,在 9 月份确诊感染 BTV-3 的羊群的羔羊死亡率高出 12.8 倍(95 % CI:11.4-14.3),绵羊死亡率高出 15.1 倍(95 % CI:13.7-16.6)。与 BTV-3 地区的羊群相比,养殖户在 9 月份之后发现有临床症状的羊群中,羔羊和绵羊的死亡率分别是 BTV-3 地区的 4.6 倍(95 % CI:4.2-5.0)和 5.6 倍(95 % CI:5.1-6.0)。在 BTV-3 爆发期间,山羊的死亡数增加了约 4000 只。在被通报的农场中,山羊(≥1 年)的死亡率是无 BTV-3 地区的 1.8 倍(95 % CI:1.2-2.8)。自 2024 年 5 月起,荷兰可提供多种 BTV-3 疫苗。2024 年 6 月,荷兰羊群首次确诊新感染 BTV-3。人们希望,有了接种疫苗的可能性,BTV-3 在荷兰的传播和影响将迅速下降,不再出现 2023 年观察到的损失。
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引用次数: 0
Antimicrobial use on pig farms in Thailand: Farmer perceptions of use and resistance 泰国养猪场的抗菌药使用情况:农民对使用和抗药性的看法。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-18 DOI: 10.1016/j.prevetmed.2024.106287
Suporn Thongyuan , Natthasit Tansakul

Limiting the use of antimicrobial agents in intensive livestock production is a challenge due to different perceptions between the short-term benefits of antimicrobial use (AMU) by livestock producers and the long-term social costs of antimicrobial resistance (AMR) and its impact on human, animal, and environmental health. Pig farmers are key stakeholders supporting Thailand’s national strategic plan on AMR which aims to reduce antimicrobial consumption in the livestock sector. Consequently, this study explored the knowledge, perceptions, attitudes, and practices of pig farmers towards AMU and AMR, expecting to provide information that would help guide policymakers in the development of a proper interventional program for antimicrobial stewardship. The qualitative approach utilized individual, face-to-face, in-depth, semi-structured interviews with the 20 owners of middle- and large-scale pig farms in eastern Thailand. The major themes identified in this finding were: (1) the use of antimicrobials on farms and the knowledge of antimicrobials; (2) AMU on pig farms (the purpose of AMU, antimicrobial prescription practices, and performing antimicrobial susceptibility testing); (3) attitudes towards prescribing practices and record keeping; (4) farm animal husbandry practices and AMU; (5) factors influencing AMU; and (6) awareness regarding AMR. Most of the pig farm owners recognized that achieving Good Agricultural Practices certification required following the legislation and regulations for AMU. Other observations were that the respondents had positive attitudes towards prescribing practices, performing antimicrobial susceptibility testing before antimicrobial therapy, and recording drug use on farms; however, there was low awareness of AMR. In addition, alternative substances, such as medicinal plants, and proper biosecurity practices were mentioned. Factors influencing AMU on pig farms were intensive enforcement of legislation and regulations, the implementation of farm management practices, the provision of information and consultancy services by veterinary professionals, farmer experience, and consumer trends.

在集约化畜牧生产中限制抗菌剂的使用是一项挑战,因为畜牧生产者对使用抗菌剂(AMU)的短期效益与抗菌剂耐药性(AMR)的长期社会成本及其对人类、动物和环境健康的影响有着不同的认识。养猪户是支持泰国国家 AMR 战略计划的主要利益相关者,该计划旨在减少畜牧业中的抗菌素消耗。因此,本研究探讨了养猪户对 AMU 和 AMR 的认识、看法、态度和做法,希望提供有助于指导政策制定者制定适当的抗菌药物管理干预计划的信息。定性研究采用面对面、深入、半结构化访谈的方式,对泰国东部 20 家中型和大型养猪场的场主进行了个别访谈。这项研究发现的主要主题是(1) 猪场抗菌药物的使用和抗菌药物知识;(2) 猪场的 AMU(AMU 的目的、抗菌药物处方实践和抗菌药物药敏试验);(3) 对处方实践和记录保存的态度;(4) 猪场畜牧实践和 AMU;(5) 影响 AMU 的因素;(6) 对 AMR 的认识。大多数猪场主认识到,要获得良好农业规范认证,就必须遵守 AMU 的法律法规。其他观察结果表明,受访者对开具处方、在抗菌素治疗前进行抗菌素药敏试验和记录猪场用药情况持积极态度,但对 AMR 的认识不足。此外,受访者还提到了药用植物等替代药物和适当的生物安全措施。影响养猪场 AMU 的因素包括法律法规的严格执行、农场管理措施的实施、兽医专业人员提供的信息和咨询服务、养殖户的经验以及消费趋势。
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引用次数: 0
Evaluation of nasal swab and nasal wipe for detection of Influenza A in swine using Bayesian latent class analysis 利用贝叶斯潜类分析法评估鼻拭子和鼻抹布检测猪甲型流感的效果。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-17 DOI: 10.1016/j.prevetmed.2024.106292
Francisco Elias Vendruscolo , Caroline Pissetti , Eduardo de Freitas Costa , Janice Reis Ciacci Zanella

Influenza A virus (IAV) is an important pathogen in Brazilian swine herds, and monitoring the viral circulation is essential to control and reduce the transmission. Surveillance programs for IAV are often based on individual piglets level sampling, making the evaluation of the available diagnostic tools crucial to assessing IAV circulation in herds. Thus, two sample collection methodologies were compared in pig herds in southern Brazil to detect IAV by RT-qPCR: nasal swab (NS) and nasal wipe (NW). A Bayesian latent class model (BLCM) was set for two tests and two populations. The NW and NS used are more specific (higher than 95 % for both) than sensitive. The sensitivity for NW was lower than the NS, 84.14 % (70 % – 95 %; posterior probability interval (PPI): 95 %) and 87.15 % (73 % – 97 %; PPI: 95 %), respectively, and the specificity was 95 % (90 % – 99 %; PPI: 95 %) and 99 % (96 % – 100 %; PPI: 95 %), respectively. Although the wipe sample collection loses both sensitivity and specificity compared with nasal swab, differences in test performance were very limited and PPIs largely overlapped. Therefore NW can also be considered a valuable tool. The decision about the use of both techniques should be based on the trade-off between their performance limitations and feasibility in routine monitoring.

甲型流感病毒(IAV)是巴西猪群中的一种重要病原体,监测病毒循环对控制和减少传播至关重要。对 IAV 的监测计划通常基于单个仔猪的采样,因此对现有诊断工具的评估对评估猪群中 IAV 的传播情况至关重要。因此,我们比较了在巴西南部猪群中采用 RT-qPCR 检测 IAV 的两种样本采集方法:鼻拭子(NS)和鼻抹布(NW)。贝叶斯潜类模型(BLCM)适用于两种检测方法和两种人群。所使用的 NW 和 NS 的特异性(均高于 95%)高于敏感性。NW 的灵敏度低于 NS,分别为 84.14 %(70 % - 95 %;后验概率区间 (PPI):95 %)和 87.15 %(70 % - 95 %;后验概率区间 (PPI):95 %):95 %)和 87.15 %(73 % - 97 %;PPI:95 %),特异性分别为 95 %(90 % - 99 %;PPI:95 %)和 99 %(96 % - 100 %;PPI:95 %)。虽然与鼻拭子相比,擦拭样本采集的灵敏度和特异性都有所下降,但检测结果的差异非常有限,而且 PPI 基本重叠。因此,鼻拭子也可被视为一种有价值的工具。在决定是否使用这两种技术时,应权衡其性能局限性和在常规监测中的可行性。
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引用次数: 0
Beliefs, mindset and personality of farm managers working in large commercial dairy herds: Association with calf on-farm mortality 在大型商业奶牛场工作的牧场管理人员的信念、心态和个性:与牧场犊牛死亡率的关系
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-14 DOI: 10.1016/j.prevetmed.2024.106283
Kerli Mõtus , Dagni-Alice Viidu , Tanel Kaart , Eamonn Ferguson

This study aimed to describe the attitudes and personalities of farm managers (FMs) in large Estonian dairy herds and analyse the potential associations with calf mortality. The study included FMs from 114 free-stall farms with at least 100 cows. Each participant completed a questionnaire that comprised questions about the respondent and various statements to reveal their attitudes towards calves, calf mortality, and farming in general. A 7-point Likert scale was used to record the responses. The data on the number of live births and deaths and animal movement data were gathered from farm records and the Estonian Agricultural Registers and Information Board. The yearly calf mortality risk (%) during the first 21 days (YAG) and mortality rate between 22–90 days of age (OAG) adjusted for the animal time-at-risk were then calculated for each herd. Univariate negative binomial regression analysis was used to identify associations between calf mortality risk/rate, and the studied statements and variables with a p-value < 0.25 were included in a k-modes clustering analysis. The mean calf mortality risk was determined to be 5.9 % (range 0.0–26.8 %) during the first 21 days and mean calf mortality rate was 1.8 (range 0.0–9.2) deaths per 100 calf-months during 22–90 days of age. In both age group analyses, two FMs´ clusters formed based on 17 pre-selected statements. The FMs of the high-mortality cluster were found to be dissatisfied with the calf mortality levels. In the YAG analysis, FMs from high-mortality cluster gave lower priority to the issue of calf mortality, placed high importance on the influence of workers on calf mortality, and were more satisfied with the staff's performance compared to FMs of the cluster of herds with lower calf mortality. They were additionally less satisfied with their own performance and felt less recognized by the farm staff. They were also more inclined to try new products and practices on the farm and demonstrated greater empathy towards cattle. In the OAG analysis, the FMs from the higher-mortality cluster viewed reducing calf mortality more costly, had a less ambitious and target-driven management style, and rated their self-performance lower. This study determined that FMs working in herds with high calf mortality were dissatisfied and did not prioritize addressing calf mortality compared to managers working in farms with lower calf mortality. FMs' attitudes and management styles were associated with calf mortality, while the respondents' personality traits had little influence.

本研究旨在描述爱沙尼亚大型奶牛场管理人员(FMs)的态度和个性,并分析与犊牛死亡率的潜在关联。研究对象包括 114 个至少拥有 100 头奶牛的自由牧场的牧场主。每位参与者都填写了一份问卷,其中包括有关受访者的问题和各种陈述,以揭示他们对犊牛、犊牛死亡率和一般养殖业的态度。问卷采用 7 点李克特量表记录回答。活产和死亡数量数据以及动物移动数据均来自农场记录和爱沙尼亚农业登记和信息委员会。然后计算每个牛群头 21 天内的犊牛年死亡风险 (%) 和 22-90 日龄期间的死亡率 (OAG),并根据动物的风险时间进行调整。采用单变量负二项回归分析来确定犊牛死亡风险/死亡率之间的关联,并将所研究的陈述和 p 值为 0.25 的变量纳入 k 模式聚类分析。在头 21 天内,平均犊牛死亡风险为 5.9%(范围为 0.0-26.8%),在 22-90 天内,平均犊牛死亡率为每 100 个犊牛月死亡 1.8 人(范围为 0.0-9.2)。在两个年龄组的分析中,根据 17 个预选语句形成了两个 FMs 聚类。高死亡率群组的FMs对犊牛死亡率水平不满意。在 YAG 分析中,与犊牛死亡率较低的牧场群的 FMs 相比,死亡率高的牧场群的 FMs 对犊牛死亡率问题的重视程度较低,对工作人员对犊牛死亡率的影响的重视程度较高,对工作人员的表现较为满意。此外,他们对自己的表现不太满意,也不太被牧场员工认可。他们也更愿意在牧场尝试新产品和新方法,对牛表现出更大的同情心。在 OAG 分析中,死亡率较高组群的农场主认为降低犊牛死亡率的成本较高,管理风格的雄心和目标驱动力较弱,对自我绩效的评价较低。本研究发现,与犊牛死亡率较低的牧场管理人员相比,在犊牛死亡率较高的牧场工作的管理人员并不满意,也没有将解决犊牛死亡率问题放在首位。财务管理人员的态度和管理方式与犊牛死亡率有关,而受访者的个性特征影响不大。
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引用次数: 0
Combination of an enzyme-linked immunosorbent assay and an indirect fluorescence assay for a nationwide sero-survey of Toxoplasma gondii infection in pig herds in Taiwan 结合酶联免疫吸附测定法和间接荧光测定法进行台湾猪群弓形虫感染的全国血清调查
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2024-07-14 DOI: 10.1016/j.prevetmed.2024.106286
Kendy Tzu-Yun Teng , Chao-Chin Chang , Shao-Wen Hung , Ming-Tang Chiou , Chao-Nan Lin , Cheng-Yao Yang

Toxoplasma gondii is a zoonotic pathogen that can infect farm animals, companion animals, and humans, sometimes causing public health issues. In Taiwan, the pig industry is a vital agricultural industry, with a self-sufficiency rate of 91 %, and pigs are also food-producing animal reservoirs of Toxoplasma gondii. Infected pigs are usually asymptomatic, and abortions and death may occur in severe cases. We combined an enzyme-linked immunosorbent assay (ELISA) and an indirect fluorescence assay (IFA) to investigate the seroprevalence of Toxoplasma gondii among pig populations in Taiwan. A stratified sampling approach to determine the number of sample farms proportional to the number of pig farms in each county was employed, with 15 blood samples collected at each farm between July and September 2017. With the tested results, empirical Bayesian smoothing was utilized to assess the proportion of Toxoplasma-positive farms at the county level. Bayesian mixed-effects logistic regression models, incorporating farm and county as random effects, were employed to investigate associations between Toxoplasma test results and potential risk factors. A total of 930 serum samples from 62 pig farms were collected and tested. An overall herd prevalence of 27.4 % was shown with the seroprevalence in northern Taiwan being greater than that in southern Taiwan. The sampling month and companion dog density in 2017 were significantly associated with Toxoplasma infections in pigs. With every increase in the number of companion dogs per km² at the county level, the odds of Toxoplasma infection in pigs increased by 4.7 % (95 % CI: 1.7–8.9 %). This study demonstrated that combining ELISA for screening with IFA for confirmation is a cost-effective and time-saving method for conducting a large-scale sample investigation. This was also the first nationwide, cross-sectional study in Taiwanese pig herds to investigate Toxoplasma gondii infection.

弓形虫是一种人畜共通病原体,可感染农场动物、伴侣动物和人类,有时会引发公共卫生问题。在台湾,养猪业是重要的农业产业,自给率高达 91%,猪也是弓形虫的产粮动物库。受感染的猪通常无症状,严重时会流产或死亡。我们结合酶联免疫吸附测定法(ELISA)和间接荧光测定法(IFA),调查了台湾猪群的弓形虫血清流行率。采用分层抽样的方法,根据每个县的养猪场数量按比例确定样本养猪场的数量,在 2017 年 7 月至 9 月期间在每个养猪场采集 15 份血样。根据测试结果,利用经验贝叶斯平滑法评估了县级弓形虫阳性猪场的比例。贝叶斯混合效应逻辑回归模型将农场和县作为随机效应,用于研究弓形虫检测结果与潜在风险因素之间的关联。共收集并检测了来自 62 个养猪场的 930 份血清样本。结果显示,猪群的总体流行率为 27.4%,台湾北部的血清流行率高于台湾南部。2017 年的采样月份和伴侣犬密度与猪的弓形虫感染有显著关联。县级每平方公里的伴侣犬数量每增加,猪感染弓形虫的几率就增加 4.7 %(95 % CI:1.7-8.9 %)。这项研究表明,在进行大规模样本调查时,将 ELISA 筛查与 IFA 确认相结合是一种既经济又省时的方法。这也是首次在台湾猪群中开展的全国性横断面弓形虫感染调查研究。
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Preventive veterinary medicine
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