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'Implementation of bio…what?' Farm workers' subjectivities in Spanish dairy cattle farms through an ethnographic approach. “生物的实现……什么?”西班牙奶牛农场农场工人的主体性:民族志研究。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-11 DOI: 10.1016/j.prevetmed.2024.106407
Sebastian Moya, Josep Espluga-Trenc, Gareth Enticott

This study explores the implementation of biosecurity measures by farm workers through daily work routines on dairy cattle farms in Spain. The implementation of biosecurity measures on dairy cattle farms is mainly decided by farmers and veterinarians, but it is carried out by both farmers and farm workers. However, farm workers may be affected by socio-employment factors such as the precariousness of their work such that implementation of biosecurity measures may be context dependent and may differ from official recommendations. An ethnographic approach was used through observations and conversations on four farms in two regions of Spain, two in Galicia (north-west) and two in Catalonia (north-east) to explore these factors. The profiles of participants were farmer-family workers, internal worker-employees and external worker-employees. Results showed that there were social differences, particularly communicative and hierarchical differences, between workers and farmers that influenced the implementation of biosecurity measures. Workers implemented biosecurity practices incompletely, differently or incorrectly from their supervisors' instructions. Workers also relied on what the authors called an anthropomorphic approach to implementing biosecurity measures, which deviated from farm guidelines. In order to improve the implementation of biosecurity measures on dairy cattle farms, it is necessary to consider workers as key stakeholders in biosecurity. Such consideration could also help to professionalise workers, reduce their turnover and increase their permanence on these farms.

本研究通过西班牙奶牛养殖场的日常工作,探讨农场工人实施生物安全措施的情况。奶牛养殖场生物安全措施的实施主要由养殖户和兽医决定,但由养殖户和农场工人共同实施。然而,农场工人可能受到社会就业因素的影响,例如他们工作的不稳定性,因此生物安全措施的实施可能取决于具体情况,可能与官方建议不同。通过对西班牙两个地区的四个农场(两个在加利西亚(西北部),两个在加泰罗尼亚(东北部))的观察和对话,采用了民族志方法来探索这些因素。调查对象的概况为农民家庭工人、内部工人-雇员和外部工人-雇员。结果表明,工人和农民之间存在社会差异,特别是沟通和等级差异,影响了生物安全措施的实施。工人实施的生物安全措施不完全,与主管的指示不同或不正确。工人们还依赖于作者所谓的拟人化方法来实施生物安全措施,这偏离了农场的指导方针。为了改善奶牛养殖场生物安全措施的实施,有必要将工人视为生物安全的关键利益相关者。这种考虑也有助于工人的专业化,减少他们的流动率,增加他们在这些农场的持久性。
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引用次数: 0
Overweight and obese body condition in ∼4.9 million dogs and ∼1.3 million cats seen at primary practices across the USA: Prevalences by life stage from early growth to senior. 在美国各地的初级实践中,约490万只狗和130万只猫的超重和肥胖身体状况:从早期生长到老年的生命阶段的患病率。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-03 DOI: 10.1016/j.prevetmed.2024.106398
Mathieu Montoya, Franck Péron, Tabitha Hookey, JoAnn Morrison, Alexander J German, Virginie Gaillard, John Flanagan

Adult dogs and cats in overweight or obese condition are common, but prevalence data for different life stages, especially growth, are limited, and may help inform when preventative measures may be most effective. In this retrospective observational study, prevalences of overweight and obese condition were determined from the electronic medical records of dogs and cats of all life stages visiting Banfield Pet Hospital in the USA between 2020 and 2023. Animals were identified either by body condition score (BCS; overweight 6-7; obese 8-9) or from a clinical diagnosis of overweight condition or obesity when recorded. Life stages (early growth, late growth, young adult, adult, mature, and senior) were defined by age range, adjusted for species and breed size in dogs. Individuals could only be included once within each life stage, with the maximum BCS used. Prevalence was determined for the 4-year period and for each calendar year. The evolution of BCS was also assessed for animals with multiple records. In total, 4933,916 unique dogs and 1341,118 unique cats were included. In dogs, prevalences of overweight or obese condition were: 0.9 % and < 0.0 % (early growth), 9.5 % and 0.3 % (late growth), 24.4 % and 1.9 % (young adult); 44.5 % and 8.4 % (adult), 50.1 % and 12.6 % (mature); 46.4 % and 11.3 % (senior). In cats, prevalences of overweight or obese condition were: 0.8 % and < 0.0 % (early growth); 10.7 % and 0.4 % (late growth); 36.2 % and 3.6 % (young adult); 47.2 % and 13.9 % (adult); 44.8 % and 21.7 % (mature); and 32.0 % and 12.6 % (senior). From 2020-2021 and 2021-2022 prevalences of overweight and obese condition in dogs and overweight condition in cats increased in most life stages. The prevalence of overweight condition in dogs and obese condition in cats and dogs significantly decreased between 2022 and 2023 for some life stages. The odds ratio of an overweight or obese condition in adulthood was 1.85 (95 % confidence interval [CI]: 1.81, 1.86); P ≤ 0.001) for dogs and 1.52 (95 % CI: 1.48, 1.56; P ≤ 0.001) for cats where an overweight or obese condition was recorded during growth. In conclusion, both overweight and obese condition are prevalent throughout adult life, peaking during the mature life stage in dogs and cats, with overweight or obese condition during growth persisting into adulthood in most affected animals. Veterinarian-led prevention strategies are recommended from growth onwards, including the use of growth standard charts.

超重或肥胖的成年狗和猫很常见,但不同生命阶段,特别是生长阶段的患病率数据有限,可能有助于告知何时预防措施可能最有效。在这项回顾性观察性研究中,根据2020年至2023年期间在美国班菲尔德宠物医院就诊的所有生命阶段的狗和猫的电子病历,确定了超重和肥胖状况的患病率。采用体况评分(BCS)对动物进行鉴定;超重6 - 7;肥胖(8-9)或从临床诊断超重或肥胖时记录。生命阶段(早期生长、晚期生长、青年、成年、成熟和老年)按年龄范围定义,并根据狗的种类和品种大小进行调整。个体在每个生命阶段只能被纳入一次,使用最大BCS。确定了4年期间和每个日历年的患病率。对具有多个记录的动物的BCS进化进行了评估。总共包括4933916只独特的狗和1341118只独特的猫。在狗中,超重或肥胖状况的患病率为:0.9% %和
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引用次数: 0
African Swine Fever: Spread and seasonal patterns worldwide. 非洲猪瘟:在世界范围内的传播和季节性模式。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-07 DOI: 10.1016/j.prevetmed.2024.106401
Isadora Martins Pinto Coelho, Marcelo Teixeira Paiva, Ailton Junior Antunes da Costa, Rafael Romero Nicolino

African Swine Fever (ASF) is a viral disease affecting both wild and domestic swine, with the potential for major lethality rates. In addition to direct losses for producers, its notification in a free country or zone leads to international trade restrictions. The disease has spread globally at concerning levels, with outbreaks reported in recent years across five continents. Time series analysis of ASF outbreak notifications indicates an increasing trend in Europe and Asia. For Europe, including both domestic pigs and wild boar, seasonality was pronounced in the summer and autumn (July, August, and October). Wild boar represented 78.00 % (25,017) of the reported outbreaks in the continent, with pronounced seasonality in winter (December, January and February) and a peak in summer (July). In domestic pigs, seasonality was pronounced mainly in the summer (July and August) and autumn (October). Poland and Romania were the countries with the highest number of reported outbreaks on the continent, representing 35.34 % and 22.50 % of the total in Europe, respectively. In Asia, analysis including both domestic pigs and wild boar showed pronounced seasonality in February and March. For domestic animals, a higher number of outbreaks occur in the early months of the year (mainly February, and March), in the third quarter and early fourth (August, September, October and November), with a decrease in the middle (July) and at the end of the year (December). In China, the notifications are predominantly in domestic swine, with 97.21 % (209) of the reported outbreaks in the country. For wild boars, South Korea accounts for 96.46 % (1690) of the notifications in Asia. Seasonality in Europe may be related to increased human movement during these periods and wild boar behavior. In Asia, seasonality coincides with the period immediately following the Chinese New Year, probably related to the increased national demand for pork and the movement of people and by-products in the country. Recent notifications in 2021 and 2022 in the Caribbean region have raised concerns across the Americas.

非洲猪瘟(ASF)是一种影响野生猪和家猪的病毒性疾病,具有潜在的高致死率。除了生产者的直接损失外,它在自由国家或地区的通知会导致国际贸易限制。该疾病已在全球范围内以令人关切的程度传播,近年来在五大洲报告了疫情。对非洲猪瘟疫情通报的时间序列分析表明,欧洲和亚洲的疫情呈上升趋势。在欧洲,包括家猪和野猪,季节性在夏季和秋季(7月、8月和10月)明显。在非洲大陆报告的疫情中,野猪占78.00 %(25,017),季节性明显,冬季(12月、1月和2月),夏季(7月)为高峰。家猪的季节性主要表现在夏季(7、8月)和秋季(10月)。波兰和罗马尼亚是欧洲大陆报告疫情最多的国家,分别占欧洲总数的35.34% %和22.50% %。在亚洲,包括家猪和野猪在内的分析显示,2月和3月有明显的季节性。家畜在年初(主要是2月和3月)、第三季度和第四月初(8月、9月、10月和11月)暴发的次数较多,在年中(7月)和年底(12月)减少。在中国,通报的主要是家猪,在该国报告的疫情中占97.21% %(209)。就野猪而言,韩国占亚洲通报总数的96.46% %(1690例)。欧洲的季节性可能与这些时期人类活动的增加和野猪的行为有关。在亚洲,季节性与中国新年之后的一段时间相吻合,可能与全国对猪肉的需求增加以及该国人口和副产品的流动有关。加勒比地区最近在2021年和2022年通报的病例引起了整个美洲的关注。
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引用次数: 0
A salmon lice prediction model. 一个鲑鱼虱预测模型。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-13 DOI: 10.1016/j.prevetmed.2024.106405
Leif Christian Stige, Lars Qviller, Hildegunn Viljugrein, Saraya Tavornpanich

Salmon lice (Lepeophtheirus salmonis) are parasites on salmonid fish and a density-dependent constraint to the sustainable farming of salmonids in open net pens. To control the parasites, fish farmers in Norway are required to count the number of salmon lice in different developmental stages on a subset of the fish each week. Furthermore, they must ensure that the number of adult female lice per fish does not increase beyond a specified threshold level. Here we present a model that may assist farmers in the salmon lice management. The model can predict the numbers of salmon lice in different developmental stages in each cage in a farm one to two weeks ahead. Input variables are current-week lice counts, a lice infestation pressure index, sea temperature, mean weight of the fish and presence or absence of wrasses (family Labridae) as cleaner fish. Count data for three parasitic stage groups (adult females, other motiles and sessile) are analysed jointly in one statistical model. The model predicted a large part of the variance, e.g. 50 % of the farm-level variance in adult female lice two weeks ahead. At farm-level, but not at cage-level, the numbers of other motile and sessile lice were, however, similarly well predicted by assuming "next week is the same as this week". The model also quantifies uncertainty and shows what range of outcomes is likely given the observations to that date. By using this model as decision support, fish farmers may more accurately assess the risk of exceeding lice limits.

鲑虱(Lepeophtheirus salmonis)是鲑科鱼类的寄生虫,是开放式网栏中可持续养殖鲑科鱼类的密度依赖性制约因素。为了控制这种寄生虫,挪威的养鱼户被要求每周统计不同发育阶段的鲑鱼虱的数量。此外,他们必须确保每条鱼的成年雌虱数量不超过规定的阈值水平。在这里,我们提出了一个模型,可以帮助农民在鲑鱼虱管理。该模型可以提前一到两周预测养殖场每个笼中处于不同发育阶段的鲑鱼虱的数量。输入变量为当周的虱子数量、虱子侵扰压力指数、海水温度、鱼的平均体重以及作为清洁鱼的濑鱼(濑鱼科)的存在与否。在一个统计模型中,对三个寄生阶段组(成年雌性、其他活动体和无梗体)的计数数据进行了联合分析。该模型预测了很大一部分方差,例如,成年雌性虱子提前两周的农场水平方差的50% %。然而,在农场水平,而不是笼子水平,其他活动和不动的虱子的数量同样可以通过假设“下周与本周相同”来预测。该模型还量化了不确定性,并显示了根据该日期的观测结果可能出现的结果范围。通过使用该模型作为决策支持,养鱼户可以更准确地评估超过虱限的风险。
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引用次数: 0
Bovine besnoitiosis: Assessment of the diagnostic accuracy of three different tests using a Bayesian latent class model approach and clinical characterization of the disease. 牛黑斑病:使用贝叶斯潜类模型方法和疾病的临床特征评估三种不同测试的诊断准确性。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-31 DOI: 10.1016/j.prevetmed.2024.106415
Joana Jacinto, Giulia Graziosi, Roberta Galuppi, Anastasia Poluzzi, Tolulope Ogundipe, Gianfranco Militerno, Andrea Beltrame, Arcangelo Gentile, Filippo Maria Dini

Bovine besnoitiosis, a disease caused by the tissue cyst-forming apicomplexan Besnoitia besnoiti, is re-emerging in Europe, leading to significant impairment of health and production, as well as economic losses. The early detection of the disease is of the utmost importance for the implementation of effective control measures, yet this is a challenge due to the lack of specific early clinical signs. The objectives of our study were 1) to estimate the diagnostic accuracy of three tests to detect B. besnoiti in naturally exposed cattle (histopathology-skin (HIS-SK); PCR-skin (PCR-SK); and parallel PCR of nasal and scleroconjunctival swabs (PCR-NS-SC)) using a Bayesian latent class model (BLCM) and 2) to describe the clinical presentation of besnoitiosis in the studied animals. The study involved 54 adult Limousin cattle. Biosecurity measures were assessed and scored as medium. At clinical examination, a sire was diagnosed with a form of besnoitiosis between the end of the acute phase and the beginning of the chronic phase. Furthermore, 29 animals displaying a subclinical infection, characterized by the presence of scleroconjunctival cysts, were identified. The PCR-SK and PCR-NS-SC were able to detect B. besnoitia. The diagnostic performance of PCR-SK, PCR-NS-SC and HIS-SK was evaluated. The BLCM indicated that HIS-SK had the highest specificity (99.1 %, 95 % posterior probability interval PI: 96-100 %), while PCR-SK and PCR-NS-SC demonstrated higher sensitivities (91.0 %, 95 % PI: 68-100 %, and 85.0 %, 95 % PI: 67-100 %, respectively). The study concludes that the use of a parallel PCR-NS-SC could represent a viable alternative for the early detection of B. besnoiti, providing a less invasive method to monitor and control bovine besnoitiosis at the herd level.

牛绒毛膜病是一种由组织囊肿形成的牛绒毛膜复合体引起的疾病,在欧洲重新出现,导致健康和生产受到严重损害,并造成经济损失。疾病的早期发现对于实施有效的控制措施至关重要,但由于缺乏具体的早期临床症状,这是一项挑战。本研究的目的是:1)估计在自然暴露的牛(皮肤组织病理学(HIS-SK))中检测贝氏杆菌的三种检测方法的诊断准确性;PCR-skin (PCR-SK);以及使用贝叶斯潜类模型(BLCM)对鼻和巩膜结膜拭子进行平行PCR (PCR- ns - sc)和2)来描述所研究动物鼻窦炎的临床表现。这项研究涉及54头成年利穆赞牛。生物安全措施的评估和评分为中等。在临床检查中,在急性期结束和慢性期开始之间诊断出一种形式的肝硬化。此外,29只动物表现出亚临床感染,其特征是存在巩膜结膜囊肿。PCR-SK和PCR-NS-SC均能检出贝氏杆菌。评价PCR-SK、PCR-NS-SC和HIS-SK的诊断性能。BLCM表明HIS-SK特异性最高(99.1 %、95 %后验概率区间PI: 96 - 100年 %),而PCR-SK和PCR-NS-SC证明更高的敏感性(91.0 % 95 %π:68 - 100 %,和85.0 %,95 % PI: 67 - 100 %,分别)。该研究的结论是,使用平行PCR-NS-SC可能是早期检测牛粪螺旋体的可行替代方法,为牛群水平监测和控制牛粪螺旋体病提供了一种侵入性较小的方法。
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引用次数: 0
Assessing trends in ectoparasiticidal drugs used to control ticks and flies in farm animals: A four-year analysis reveal differences between epidemiological zones at country level in Uruguay. 评估用于控制农场动物中蜱虫和苍蝇的体外寄生虫药的趋势:一项为期四年的分析揭示了乌拉圭国家一级流行病学区之间的差异。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-19 DOI: 10.1016/j.prevetmed.2024.106412
Ignacio Alcántara, Gonzalo Suárez

The use of ectoparasiticides is a major concern in the control of parasites. In this study, we examined the trends and patterns of veterinary medicines use comparing between a high-risk epidemiological zone (HRZ) and a low-risk epidemiological zone (LRZ) for ectoparasites over a four-year period (2017-2020) at country level data. The objective of this study was to analyze the patterns of ectoparasiticide use in Uruguayan cattle, using the Anatomical Therapeutic Chemical Classification System for Veterinary Drugs (ATCvet) and dose indicators to consider regional variations in the animal population and production intensity. A total of 222 registered products classified as acaricides and/or insecticides based on 21 different active ingredients were grouped into 8 ATCvet level 4 categories. The annual consumption of active ingredients in ectoparasiticides averaged 40.6 tons. The total volume in the HRZ was 693 % higher than in the LRZ. The most sold ATCvet groups were Amidines (55.9 %), Pyrethrins/Pyrethroids (20.7 %), and Organophosphate Compounds (7 %). We calculated four different indicators with the resulting median values for entire country: 89.3 Technical Units per 1000 kg (IQR range of 10.5), 0.15 mg/kg of dosing biomass, 45.7 mg/ha of dose grazing area, and 3.09e+ 10 mg/LU/ha, respectively. Amidines were the most used group in the HRZ across all indicators, while Carbamates and Pyrethrins/Pyrethroids dominated in the LRZ. Cypermethrin, Amitraz, and Ethion were predominant in the HRZ, while Cypermethrin, Carbaryl, and Diazinon were common in the LRZ. The analysis of the four mixed Generalized Linear Models revealed significant differences in the use of veterinary medicines between zones with varying levels of epidemiological risk for parasitic diseases, with certain categories showing consistent patterns between indicators and zones. These results highlight the complexity of a veterinary medicine usage and the need for specialized strategies in veterinary medicine to address regional differences in the use of parasitic agents.

外驱虫剂的使用是控制寄生虫的一个主要问题。在这项研究中,我们通过国家层面的数据,比较了4年(2017-2020年)期间(高危流行病学区(HRZ)和低风险流行病学区(LRZ)体外寄生虫的兽药使用趋势和模式。本研究的目的是利用兽药解剖治疗化学分类系统(ATCvet)和剂量指标,分析乌拉圭牛体外驱虫剂的使用模式,以考虑动物种群和生产强度的区域差异。共有222种登记产品根据21种不同的有效成分被分类为杀螨剂和/或杀虫剂,被分为8个ATCvet 4级类别。除虫剂有效成分的年消费量平均为40.6吨。HRZ的总积比LRZ高693 %。销售最多的ATCvet类是脒类(55.9 %)、拟除虫菊酯/拟除虫菊酯类(20.7 %)和有机磷酸酯类(7 %)。我们计算了四个不同的指标,并得出了全国的中位数:89.3技术单位/ 1000 kg (IQR范围为10.5),0.15 mg/kg剂量生物量,45.7 mg/ha剂量放牧面积和3.09e+ 10 mg/LU/ha。在所有指标中,酰胺类是HRZ中使用最多的一类,而氨基甲酸酯类和除虫菊酯/拟除虫菊酯类在LRZ中占主导地位。高岭区以氯氰菊酯、阿米特嗪和乙硫磷为主,低岭区以氯氰菊酯、威威利和二嗪农为主。对四种混合广义线性模型的分析显示,在寄生虫病流行病学风险程度不同的地区之间,兽药的使用存在显著差异,某些类别在指标和地区之间显示出一致的模式。这些结果突出了兽药使用的复杂性和兽药专门战略的必要性,以解决寄生虫剂使用的区域差异。
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引用次数: 0
Evaluation of antibiotic purchase data for ceftiofur and enrofloxacin and minimum inhibitory concentrations among Escherichia coli isolates from swine farms in the Midwestern United States using multiple statistical models. 使用多重统计模型评估美国中西部养猪场头孢替福和恩诺沙星抗生素采购数据和大肠杆菌分离株的最低抑菌浓度。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-19 DOI: 10.1016/j.prevetmed.2024.106411
Karyn A Havas, Roy Edler, Laura Ruesch, Marlee Braun, Joel Nerem, Scott Dee, Taylor Spronk, Laura B Goodman, Noelle Noyes, H Morgan Scott

Antimicrobial resistance is considered a global One Health threat. Controlling selection pressure by reducing antibiotic use in livestock is a significant component of the response to this threat. The science concerning use and resistance is complicated and affected by time from antibiotic exposure, changing bacterial fitness, and varies by drug and pathogen. From May 2020 through October 2023, we collected intestinal (substandard and sick pigs) and fecal swab (healthy pig) samples at breed-to-wean (BTW) and wean-to-market (WTM) swine production sites and isolated E. coli bacteria. Antibiotic susceptibility testing was performed on these isolates to determine minimum inhibitory concentrations (MIC) for ceftiofur and enrofloxacin. Monthly antibiotic purchase data were used to calculate the active milligrams of drug purchased and these were divided by the kilograms of pigs produced from a farm site to provide a mass-adjusted proxy metric for farm-level antibiotic use. The relationship between use and MIC was then evaluated using a variety of multivariable statistical models. Across multiple modeling approaches, both farm type (i.e., BTW versus WTM) and farm-level antibiotic use maintained statistically significant relationships relative to E. coli MIC values for each respective drug. Use of ceftiofur and enrofloxacin can lead to increased MIC values among E. coli over time. The reasons for antibiotic purchases were not tracked as part of this project. Future work should evaluate the age of the individual pig and the time from last treatment when sampling these animals to separate out the group from individual-level effects of antibiotic use.

抗菌素耐药性被认为是一个全球性的“同一个健康”威胁。通过减少牲畜抗生素的使用来控制选择压力是应对这一威胁的一个重要组成部分。有关抗生素使用和耐药性的科学是复杂的,受抗生素暴露时间的影响,细菌适应性的变化,并因药物和病原体而异。从2020年5月到2023年10月,我们在种猪到断奶(BTW)和断奶到上市(WTM)的猪生产基地收集了肠道(不合格猪和病猪)和粪便拭子(健康猪)样本,并分离出大肠杆菌。对这些分离株进行抗生素敏感性试验,以确定头孢替福和恩诺沙星的最低抑制浓度(MIC)。每月抗生素购买数据用于计算所购买药物的有效毫克数,并将这些数据除以农场生产的猪的公斤数,以提供农场一级抗生素使用的经质量调整的代理度量。然后使用各种多变量统计模型评估使用与MIC之间的关系。通过多种建模方法,农场类型(即BTW与WTM)和农场水平的抗生素使用与每种药物的大肠杆菌MIC值保持统计学上显著的关系。随着时间的推移,使用头孢噻福和恩诺沙星可导致大肠杆菌的MIC值增加。购买抗生素的原因并没有作为这个项目的一部分进行追踪。未来的工作应该评估个体猪的年龄和最后一次治疗的时间,当这些动物取样时,将抗生素使用的个体水平影响从群体中分离出来。
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引用次数: 0
A large-scale epidemiological study on the prevalence and risk factors of losses of honey bee colonies during winter seasons in Poland. 对波兰冬季蜂群损失的流行率和危险因素进行了大规模流行病学研究。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-06 DOI: 10.1016/j.prevetmed.2024.106403
Ewa Mazur, Michał Czopowicz, Maria Iller, Anna Gajda

We conducted a citizen science survey on winter honey bee colony losses in Poland. A total of 2169 beekeepers, possessing 77 867 colonies, reported valid loss rates from all regions of the country between 2017 and 2022. We identified five beekeeping management-related factors and three types of apiaries (small-scale apiaries, medium-scale apiaries, and large-scale apiaries) and analysed their impact on winter bee colony losses. In large-scale apiaries, migration, replacement of queens, and replacement of brood combs were practiced more often than in others. Monitoring and treatment of varroosis were practiced with equal frequency in all apiary types. In total, beekeepers reported 9466 lost colonies, accounting for 12.2 % of the overall winter bee colony loss rate (95 % confidence interval (CI 95 %): 11.4 %-12.8 %). The highest overall winter bee colony losses were reported from the small-scale apiaries (14.8 %, CI 95 %: 13.2 %-16.7 %), followed by large-scale apiaries (11.6 %, CI 95 %: 10.4 %-12.8 %) and medium-scale apiaries (11.4 %, CI 95 %: 10.4 %-12.5 %). The primary category of losses was characterised by the presence of "dead colonies", with symptoms that could be linked to either colony depopulation syndrome or starvation. All management-related factors contributed to the lower winter bee colony loss rates, but the relationships were mainly mild, complex, and highly dependent on the type of apiary.

我们在波兰进行了一项关于冬季蜂群损失的公民科学调查。共有2169名养蜂人,拥有77867个蜂群,在2017年至2022年期间报告了该国所有地区的有效损失率。我们确定了五个养蜂管理相关因素和三种类型的蜂房(小型蜂房、中型蜂房和大型蜂房),并分析了它们对冬季蜂群损失的影响。在大规模的养蜂场,迁徙、更换蜂王和更换巢梳的做法比其他地方更频繁。在所有蜂房类型中,监测和治疗静脉曲张的频率相同。养蜂人总共报告了9466个蜂群损失,占整个冬季蜂群损失率的12.2 %(95% %置信区间(CI 95 %):11.4 %-12.8 %)。最高的整体冬天蜜蜂殖民地损失报告小规模砌的(14.8 %,CI 95 %:13.2 % -16.7 %),其次是大规模砌(11.6 %,CI 95 %:10.4 % -12.8 %),中等规模的砌(11.4 %,CI 95 %:10.4 % -12.5 %)。第一类损失的特点是出现“死亡的蜂群”,其症状可能与蜂群人口减少综合症或饥饿有关。所有与管理相关的因素都导致了冬季蜂群损失率的降低,但其关系主要是温和的、复杂的,并且高度依赖于蜂房的类型。
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引用次数: 0
Using supervised machine learning algorithms to predict bovine leukemia virus seropositivity in dairy cattle in Florida: A 10-year retrospective study. 使用监督机器学习算法预测佛罗里达州奶牛的牛白血病病毒血清阳性:一项为期10年的回顾性研究。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-11-28 DOI: 10.1016/j.prevetmed.2024.106387
Ameer A Megahed, Reddy Bommineni, Michael Short, Klibs N Galvão, João H J Bittar

Supervised machine-learning (SML) algorithms are potentially powerful tools that may be used for screening cows for infectious diseases such as bovine leukemia virus (BLV) infection. Here, we compared six different SML algorithms to identify the most important risk factors for predicting BLV seropositivity in dairy cattle in Florida. We used a dataset of 1279 dairy blood sample records from the Bronson Animal Disease Diagnostic Laboratory that were submitted for BLV antibody testing from 2012 to 2022. The SML algorithms that we used were logistic regression (LR), decision tree (DT), gradient boosting (GB), random forest (RF), neural network (NN), and support vector machine (SVM). A total of 312 serum samples were positive for BLV with corrected seroprevalence of 26.0 %. Subject to limitations of the analyzed retrospective data, the RF model was the best model for predicting BLV seropositivity in dairy cattle indicated by the highest Kolmogorov-Smirnov (KS) statistic of 0.75, area under the receiver operating characteristic (AUROC) of 0.93, gain of 2.6; and lowest misclassification rate of 0.10. The LR model was the worst. The RF model showed that the best predictors for BLV seropositivity were age (dairy cows of age ≥ 5 years) and geographic location (southern Florida). We concluded that the RF and other SML algorithms hold promise for predicting BLV seropositivity in dairy cattle and that dairy cattle 5 years of age or older raised in southern Florida have a higher likelihood of testing positive for BLV. This study makes an important methodological contribution to the needed development of predictive tools for effective screening for BLV infection and emphasizes the importance of collecting and using representative data in such predictive models.

有监督的机器学习(SML)算法是一种潜在的强大工具,可用于筛查奶牛是否感染牛白血病病毒(BLV)等传染病。在此,我们比较了六种不同的 SML 算法,以确定预测佛罗里达州奶牛 BLV 血清阳性的最重要风险因素。我们使用了来自布朗森动物疾病诊断实验室(Bronson Animal Disease Diagnostic Laboratory)的 1279 份奶牛血样记录数据集,这些数据集在 2012 年至 2022 年期间提交进行 BLV 抗体检测。我们使用的 SML 算法包括逻辑回归 (LR)、决策树 (DT)、梯度提升 (GB)、随机森林 (RF)、神经网络 (NN) 和支持向量机 (SVM)。共有 312 份血清样本对 BLV 呈阳性,校正血清流行率为 26.0%。受所分析的回顾性数据的限制,RF 模型是预测奶牛 BLV 血清阳性率的最佳模型,其 Kolmogorov-Smirnov (KS) 统计量最高,为 0.75,接收者操作特征下面积 (AUROC) 为 0.93,增益为 2.6,误分类率最低,为 0.10。LR 模型最差。RF 模型显示,BLV 血清阳性的最佳预测因子是年龄(年龄≥ 5 岁的奶牛)和地理位置(佛罗里达州南部)。我们的结论是,RF 和其他 SML 算法有望预测奶牛的 BLV 血清阳性率,在佛罗里达州南部饲养的 5 岁或 5 岁以上的奶牛 BLV 检测呈阳性的可能性较高。这项研究为开发有效筛查 BLV 感染的预测工具做出了重要的方法学贡献,并强调了在此类预测模型中收集和使用代表性数据的重要性。
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引用次数: 0
Use of a hidden Markov model for interpretation of serial cow milk paratuberculosis antibody enzyme-linked immunosorbent assay results adjusted for milk yield and quality. 使用隐马尔可夫模型解释一系列牛奶副结核抗体酶联免疫吸附测定结果,调整了牛奶产量和质量。
IF 2.2 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2025-02-01 Epub Date: 2024-12-25 DOI: 10.1016/j.prevetmed.2024.106413
Ian Glover, Andrew Bradley, Martin Green, Conor G McAloon, Robert Hyde, Luke O'Grady

Paratuberculosis (Johne's disease), caused by Mycobacterium avium subsp. paratuberculosis (MAP), is a common, economically-important and potentially zoonotic contagious disease of cattle, with worldwide distribution. Disease management relies on identification of animals which are at high-risk of being infected or infectious. The disease is chronic in nature, and infected animals may be infectious in the absence of overt clinical signs. Coupled with limited sensitivity of available diagnostic tests, this creates difficulties in identifying high-risk animals. In some disease-control programmes, dairy cows are classified with regards to risk according to the results of serial tests which quantify MAP antibodies in milk samples. Such classification systems are limited by the influence of non-disease factors on test results, dichotomisation of continuous results into "positive" or "negative" according to an imperfect threshold, and subjectivity in defining which patterns of serial test results indicate different risk-categories. An unsupervised learning (clustering) approach was applied to paratuberculosis test results and milk-recording data collated from 47 farms over an approximately ten-year period between 2010 and 2021. Paratuberculosis test results were first adjusted according to influential non-disease factors using linear models. Continuous-time hidden Markov models were fit to the adjusted test results. The final model revealed four distinct latent states (clusters). Examination of the distribution of adjusted test results associated with each latent state suggested that states were ordinal and aligned with disease progression. Model transition probabilities demonstrated that the probability of an animal progressing to the highest state was dependent on its current state. Of particular note was the existence of a latent state, characterised by paratuberculosis test results below the conventional test-positive threshold, which was associated with a relatively high probability of progression to the highest cluster. This research has led to objective classification of animals according to serial test results, and furthermore suggests the presence of groups of different disease risk amongst animals whose test results fall below the routinely used test-positive threshold. Identification of such groups could be used to better manage disease on farms, through implementation of management practices which limit disease transmission from high-risk animals.

由副结核分枝杆菌(MAP)引起的副结核病(约翰氏病)是一种常见的、具有重要经济价值且可能成为人畜共患的牛传染病,分布于世界各地。疾病管理依赖于对高危感染或传染性动物的识别。这种疾病是慢性病,受感染的动物可能在没有明显临床症状的情况下也具有传染性。再加上现有诊断测试的灵敏度有限,这给识别高危动物造成了困难。在一些疾病控制计划中,根据对牛奶样本中的 MAP 抗体进行量化的系列检测结果,对奶牛进行风险分类。这种分类系统受到以下因素的限制:非疾病因素对检测结果的影响、根据不完善的阈值将连续检测结果二分为 "阳性 "或 "阴性",以及主观地界定连续检测结果的哪些模式表示不同的风险类别。在 2010 年至 2021 年约十年期间,对 47 个牧场的副结核病检测结果和牛奶记录数据采用了无监督学习(聚类)方法。首先使用线性模型根据有影响的非疾病因素调整结核病检测结果。对调整后的检测结果拟合连续时间隐马尔科夫模型。最终模型揭示了四个不同的潜在状态(群组)。对与每个潜伏状态相关的调整后测试结果分布的研究表明,这些状态是顺序性的,并与疾病进展相一致。模型转换概率表明,动物进展到最高状态的概率取决于其当前状态。特别值得注意的是,存在一种潜伏状态,其特征是副结核病检测结果低于常规检测阳性阈值,这种状态与相对较高的进展到最高群组的概率相关。这项研究根据序列检测结果对动物进行了客观分类,并进一步表明,在检测结果低于常规检测阳性阈值的动物中,存在不同疾病风险的群体。通过实施限制高风险动物传播疾病的管理措施,可以利用识别这些群体来更好地管理农场的疾病。
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引用次数: 0
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Preventive veterinary medicine
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