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Integrated genomics and metabolomics analysis revealed the metabolic mechanisms by which genetic variations affect the growth performance of local chickens 综合基因组学和代谢组学分析揭示了遗传变异影响地方鸡生长性能的代谢机制
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106495
Xiaoling Yang , Xiaoxia Long , Yongxian Yang , Liqi Wang , Zhong Wang
Although many studies have examined the relationship between host genetics and serum metabolites, it is still unclear to what extent host genetic variation contributes to growth-related serum metabolic patterns in chickens. To address this issue, we performed whole-genome resequencing, transcriptome sequencing, and untargeted metabolomics analyses on blood samples collected from a population of Chinese local chickens. The results showed that single-nucleotide polymorphisms (SNPs) significantly associated with growth performance were predominantly mapped the genomic regions of SEC22C, ABCD3, SRGAP2, and CDC42BPA. SEC22C, ABCD3, and SRGAP2 were significantly associated with both body weight (BW) and average daily gain (ADG), whereas CDC42BPA was significantly associated only with ADG. Comparative analysis of blood transcriptomes between high and low BW recombinant chickens revealed that SEC22C was more strongly associated with the low BW group, while CDC42BPA exhibited significantly higher expression levels in high-weight chickens. Five metabolites, including 1-myristoyl-sn-glycerol-3-phosphate choline, were significantly associated with 45 genes, including SRGAP2, PA2G4, TENM3, MAP2K6, and ADIPOR2. Furthermore, SRGAP2 may regulate the growth of the chickens through 1-myristoyl-sn-glycerol-3-phosphate choline. This study comprehensively elucidates the combined effects of host genetics and serum metabolites on growth traits, providing a robust scientific basis for studying the growth performance of local chickens.
尽管许多研究已经研究了宿主遗传与血清代谢物之间的关系,但宿主遗传变异对鸡生长相关血清代谢模式的影响程度仍不清楚。为了解决这个问题,我们对中国地方鸡的血液样本进行了全基因组重测序、转录组测序和非靶向代谢组学分析。结果表明,与生长性能显著相关的单核苷酸多态性(snp)主要定位在SEC22C、ABCD3、SRGAP2和CDC42BPA基因组区域。SEC22C、ABCD3和SRGAP2与体重(BW)和平均日增重(ADG)均显著相关,而CDC42BPA仅与ADG显著相关。高、低体重重组鸡的血液转录组对比分析显示,低体重组的SEC22C表达量更强,而高体重组的CDC42BPA表达量显著高于低体重组。5种代谢物,包括1-肉豆蔻酰基- asn -甘油-3-磷酸胆碱,与SRGAP2、PA2G4、TENM3、MAP2K6和ADIPOR2等45个基因显著相关。SRGAP2可能通过1-肉豆蔻酰基-sn-甘油-3-磷酸胆碱调节鸡的生长。本研究全面阐明了宿主遗传和血清代谢物对生长性状的综合影响,为研究地方鸡的生长性能提供了有力的科学依据。
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引用次数: 0
Population genomic analysis of Weining chicken via dd-RAD sequencing: Unraveling diversity, structure, and selective sweeps
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106499
Zhaobi Ai , Zhonglong Zhao , Xiben Zhang , Runqian Yang , Yong Zhang , Zelin Chen , Weibo Li , Yixing Ou , Lanying Lei , Hongying Ye
To characterize the genetic diversity and evolutionary patterns of four Weining chicken strains from Guizhou Province, China, we generated genome-wide single nucleotide polymorphisms (SNPs) using dd-RAD sequencing. We found that Weining chicken exhibited moderate genetic diversity, with observed heterozygosity (Ho = 0.267) lower than expected heterozygosity (He = 0.312) and a positive inbreeding coefficient (FIS ≈ 0.14), indicating some degree of inbreeding across the population. Among strains, HM showed the highest diversity while HT had the lowest. Analyses of population structure, phylogeny, principal component analysis, and admixture consistently revealed weak genetic differentiation (FST < 0.06) and frequent gene flow among strains. Kinship analysis demonstrated mostly low pairwise relatedness, with a minority of individuals exhibiting closer kinship. Selection signature scans identified multiple candidate regions; genes within these regions were significantly enriched for biological processes and pathways related to immune response (e.g., IL-17 signaling) and metabolic regulation (e.g., MAPK signaling), which were consistently highlighted in both GO and KEGG enrichment analyses. These results demonstrate that Weining chicken has moderate genetic diversity, low population differentiation, and evidence of inbreeding and gene flow, with candidate selection signals in immune and metabolic pathways (e.g., IL-17 and MAPK signaling), providing a quantitative basis for conservation and breeding programs.
结果表明,威宁鸡具有中等程度的遗传多样性,观察到的杂合度(Ho = 0.267)低于预期的杂合度(He = 0.312),近交系数(FIS≈0.14)为正,表明种群间存在一定程度的近交。菌株中HM的多样性最高,HT的多样性最低。群体结构分析、系统发育分析、主成分分析和混合分析均显示出较弱的遗传分化(FST < 0.06)和菌株间频繁的基因流动。亲属关系分析显示,大多数人的配对关系较低,少数人表现出更密切的亲属关系。选择签名扫描识别多个候选区域;这些区域内的基因在与免疫反应(如IL-17信号传导)和代谢调节(如MAPK信号传导)相关的生物过程和途径中显著富集,这在GO和KEGG富集分析中都得到了一致的强调。上述结果表明,威宁鸡遗传多样性中等,群体分化程度低,存在近亲繁殖和基因流动,在免疫和代谢途径(如IL-17和MAPK信号)中存在候选选择信号,为保护和育种提供了定量依据。
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引用次数: 0
Gelsemium elegans extract powder alleviates high stocking density-related adverse effects in broilers via immune-intestinal microbiota synergistic mechanisms 线虫提取物粉通过免疫-肠道菌群协同机制缓解高放养密度对肉仔鸡的不良反应
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106511
Xiao-qing Xu , Yi-rong Wang , Dan-dan Guo , Yu-qing Zhou , Jiang-yu Long , Zhao-Ying Liu
This study aimed to investigate the effects of different doses of Gelsemium elegans extract powder (GEE) on broilers under high stocking density (HSD). A total of 78 one-day-old male yellow-feathered broilers were randomly assigned to 5 treatment groups: normal stocking density (NSD), HSD, HSD + 0.06% GEE, HSD + 0.12% GEE, and HSD + 0.6% GEE. The results showed that HSD impaired broiler growth and physiological functions. Dietary supplementation with 0.06% GEE (200 mg/kg diet Gelsemium elegans extract) significantly improved growth performance (marked increases in body weight, average daily feed intake, and average daily gain), reversed immune organ inhibition (evidenced by significantly increased weight and index of the spleen and bursa of Fabricius), reduced serum corticosterone levels, repaired intestinal structural damage, and corrected intestinal flora imbalance (with a decreased Firmicutes/Bacteroidetes ratio) (P < 0.05). However, medium and high doses of GEE (0.12% and 0.6%, 400 and 2000 mg/kg diet Gelsemium elegans extract) inhibited broiler growth by inducing abnormal expression of myostatin. Therefore, 0.06% GEE (200 mg/kg diet Gelsemium elegans extract) was identified as an effective and safe dose under the current experimental conditions. In conclusion, dietary supplementation with 0.06% GEE (200 mg/kg diet Gelsemium elegans extract) can effectively improve broiler growth performance and physiological functions under HSD, and its mechanism involves reducing serum corticosterone levels, enhancing immune function, repairing intestinal morphological damage, and correcting intestinal flora imbalance.
本试验旨在研究不同剂量秀丽隐杆线虫提取物粉(GEE)对高密度饲养条件下肉仔鸡的影响。试验选用1日龄雄性黄羽肉仔鸡78只,随机分为5个处理组:正常饲养密度组(NSD)、高密度组(HSD)、高密度组(HSD + 0.06% GEE)、高密度组(HSD + 0.12% GEE)和高密度组(HSD + 0.6% GEE)。结果表明,HSD对肉鸡生长和生理功能有一定的影响。饲粮中添加0.06% GEE (200 mg/kg)显著提高了生长性能(显著提高了体重、平均日采食量和平均日增重),逆转了免疫器官抑制(显著提高了脾脏和法氏囊的体重和指数),降低了血清皮质酮水平,修复了肠道结构损伤。纠正肠道菌群失衡(厚壁菌门/拟杆菌门比例降低)(P < 0.05)。而中、高剂量GEE(0.12%和0.6%,400和2000 mg/kg)通过诱导肌肉生长抑制素的异常表达抑制肉鸡生长。因此,在本试验条件下,0.06% GEE (200 mg/kg日粮秀丽隐杆菌提取物)为有效安全剂量。综上所述,饲粮中添加0.06% GEE (200 mg/kg)可有效改善HSD条件下肉鸡的生长性能和生理功能,其机制可能涉及降低血清皮质酮水平、增强免疫功能、修复肠道形态损伤、纠正肠道菌群失衡等。
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引用次数: 0
Regulation of skeletal muscle development and metabolism in broiler chickens by Urolithin A through threonine kinase 1 pathway activation 尿素A通过激活苏氨酸激酶1通路调控肉鸡骨骼肌发育和代谢
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106502
Liuting Wu , Leilei Peng , Xiaoling Zhao
Broiler skeletal muscle dysplasia is characterized by impaired muscle fiber hypertrophy and satellite cell dysfunction, leading to reduced meat yield and increased feed conversion rates, resulting in significant economic losses. With the impending global ban on β-adrenergic agonists, developing effective natural alternative treatments is an urgent requirement. Urolithin A (UA), a tannic acid metabolite derived from the gut microbiota, promotes muscle synthetic metabolism in mammals; however, its underlying mechanism in poultry remains unclear. We integrated network pharmacology, molecular docking, molecular dynamics simulations, and primary chicken skeletal muscle satellite cell (SMSC) culture experiments. A network pharmacology analysis identified threonine kinase1 (Akt1) as a key core target regulated by UA in muscle dysplasia. Further, KEGG enrichment analysis revealed differential clustering in the phosphatidylinositol-3-kinase (PI3K)–Akt1, forkhead box protein O1, and mechanistic target of rapamycin complex 1 signaling pathways. Molecular docking revealed that UA stably binds to the Akt1 protein (Binding energy: -7.7 kcal/mol), stabilized by hydrophobic interactions with Val164 and Met281. The key binding site for UA exhibits high conservation (96% homology) between mammalian and avian species. The 100 ns molecular dynamics simulation confirmed the stability of the complex. These findings indicate that the Akt1 pathway is closely associated with the protective role of uric acid in broiler muscle dysplasia. Primary skeletal muscle satellite cell experiments demonstrated that during SMSC proliferation, 50 μM UA upregulates mRNA levels of Akt1, mTORC1, and forkhead box O1, while enhancing the expression of myogenic differentiation 1 and myogenin during both proliferation and differentiation (P < 0.05). In addition, Akt1 and phosphorylated Akt1 protein levels upregulated (P < 0.05), confirming pathway activation. 50 μM UA regulates glucose metabolism by upregulating (P < 0.05) and downregulating (P < 0.05) pyruvate dehydrogenase kinase 4 (proliferation/differentiation) mRNA levels and fructose-6-phosphate kinase/fructose-2,6-bisphosphatase 3 (differentiation) mRNA levels, respectively, thereby optimizing glycolysis-oxidation balance. Our research shows that UA influences skeletal muscle satellite cells proliferation and differentiation through the Akt1 pathway and alters glucose metabolism at different stages. As a natural, residue-free compound, it holds promise for enhancing skeletal muscle growth in broilers, supporting the shift towards antibiotic-free poultry. Further animal studies are needed to confirm these in vitro results.
肉鸡骨骼肌发育不良的特点是肌纤维受损肥大和卫星细胞功能障碍,导致肉产量下降和饲料转化率升高,造成重大经济损失。随着β-肾上腺素能激动剂的全球禁用,开发有效的天然替代疗法是迫切需要的。尿素A (UA)是一种源自肠道微生物群的单宁酸代谢物,可促进哺乳动物肌肉合成代谢;然而,其在家禽中的潜在机制尚不清楚。我们将网络药理学、分子对接、分子动力学模拟和原代鸡骨骼肌卫星细胞(SMSC)培养实验相结合。网络药理学分析发现苏氨酸激酶(Akt1)是UA在肌肉发育不良中调节的关键核心靶点。此外,KEGG富集分析显示,磷脂酰肌醇-3激酶(PI3K) -Akt1、叉头盒蛋白O1和雷帕霉素复合物1信号通路的机制靶点存在差异聚类。分子对接表明,UA与Akt1蛋白稳定结合(结合能:-7.7 kcal/mol),通过与Val164和Met281的疏水相互作用稳定。UA的关键结合位点在哺乳动物和鸟类之间具有高度的保守性(96%的同源性)。100 ns分子动力学模拟证实了配合物的稳定性。这些结果表明,Akt1通路与尿酸在肉鸡肌肉发育不良中的保护作用密切相关。原代骨骼肌卫星细胞实验表明,在SMSC增殖过程中,50 μM UA上调Akt1、mTORC1和forkhead box O1 mRNA水平,同时在增殖和分化过程中增强myogenic differentiation 1和myogenin的表达(P < 0.05)。此外,Akt1和磷酸化的Akt1蛋白水平上调(P < 0.05),证实了途径激活。50 μM UA通过上调(P < 0.05)和下调(P < 0.05)丙酮酸脱氢酶激酶4(增殖/分化)mRNA水平和果糖-6-磷酸激酶/果糖-2,6-二磷酸酶3(分化)mRNA水平调节糖代谢,从而优化糖酵解-氧化平衡。我们的研究表明,UA通过Akt1途径影响骨骼肌卫星细胞的增殖和分化,并改变不同阶段的葡萄糖代谢。作为一种天然的无残留化合物,它有望促进肉鸡骨骼肌的生长,支持向无抗生素家禽的转变。需要进一步的动物研究来证实这些体外结果。
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引用次数: 0
Bifidobacterium supplementation ameliorates LPS-induced immune stress and intestinal barrier dysfunction in goslings 补充双歧杆菌可改善lps诱导的雏鹅免疫应激和肠道屏障功能障碍
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106512
Cihang Zhang , Usman Nazir , Shi Chen , Zhi Yang , Zhiyue Wang , Haiming Yang
Lipopolysaccharide (LPS)-induced intestinal inflammation is a major challenge to intensive poultry production, affecting growth and overall health. It necessitates effective dietary strategies to enhance gut resilience and immune functionality. This study evaluated the effect of dietary Bifidobacterium supplementation on growth performance, intestinal health and immune responses in LPS-stressed goslings. A total of 288 one-day-old male Jiangnan white goslings (15–28 days) were allocated to six groups in a 2 × 3 factorial design, with Bifidobacterium doses as (0, 300, 600 mg/kg) with or without LPS challenge (0.5 mg/kg BW via intraperitoneal injection). Key findings revealed that LPS stress significantly reduced the growth performance by reducing average daily feed intake (ADFI) and average daily gain (ADG) (P < 0.01) while enhancing the feed conversion ratio (FCR; P < 0.05). Supplementation with 300 mg/kg Bifidobacterium improved ADG by 16.7%, though 600 mg/kg conferred no incremental benefits. LPS exposure upregulated pro-inflammatory cytokines (IL-1β, IL-6, TNF-α) and suppressed anti-inflammatory IL-10 and antioxidant enzymes (SOD, CAT, GSH-Px). Bifidobacterium (300 mg/kg) reduced inflammation and enhanced antioxidant capacity, increasing catalase (CAT) activity by 43.3%. Intestinal morphology was compromised by LPS, reducing the villus-to-crypt ratio (VH:CD), while Bifidobacterium improved villus height (9.8% increase at 21 days) and V/C (4.1 at 28 days). In conclusion, 300 mg/kg Bifidobacterium optimally mitigated LPS-induced stress by improving intestinal integrity, reducing systemic inflammation and oxidative damage, and restoring growth hormone axis function, thereby improving growth efficiency. These findings highlight its potential as a cost-effective intervention for enhancing resilience in intensive goose production systems.
脂多糖(LPS)诱导的肠道炎症是集约化家禽生产的主要挑战,影响生长和整体健康。它需要有效的饮食策略来增强肠道弹性和免疫功能。本研究评估了饲粮中添加双歧杆菌对lps应激雏鹅生长性能、肠道健康和免疫反应的影响。试验选用1日龄15 ~ 28日龄江南白鹅288只,按2 × 3因子设计分为6组,双双杆菌剂量分别为(0、300、600 mg/kg), LPS攻毒(腹腔注射0.5 mg/kg BW)各组。关键结果表明,LPS胁迫显著降低了平均日采食量(ADFI)和平均日增重(ADG) (P < 0.01),提高了饲料系数(FCR; P < 0.05),显著降低了生长性能。添加300 mg/kg双歧杆菌可使平均日增重提高16.7%,但600 mg/kg双歧杆菌没有增加益处。LPS暴露上调促炎细胞因子(IL-1β、IL-6、TNF-α),抑制抗炎IL-10和抗氧化酶(SOD、CAT、GSH-Px)。双歧杆菌(300 mg/kg)可降低炎症反应,增强抗氧化能力,使过氧化氢酶(CAT)活性提高43.3%。LPS破坏了肠道形态,降低了绒毛与隐窝的比率(VH:CD),而双歧杆菌提高了绒毛高度(21天增加了9.8%)和V/C(28天增加了4.1)。综上所述,300 mg/kg双歧杆菌可通过改善肠道完整性、减少全身炎症和氧化损伤、恢复生长激素轴功能,从而改善lps诱导的应激,从而提高生长效率。这些发现强调了它作为一种具有成本效益的干预措施的潜力,可以提高集约化鹅生产系统的恢复力。
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引用次数: 0
Effects of dietary Phellinus linteus polysaccharides supplementation on productive performance, egg quality, antioxidant status, immune function, cecal microbiota, jejunal morphology, and metabolism in laying hens under lipopolysaccharide challenge 饲粮中添加黄颡鱼多糖对脂多糖刺激下蛋鸡生产性能、蛋品质、抗氧化状态、免疫功能、盲肠微生物群、空肠形态和代谢的影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.psj.2026.106500
Yong Yue , Shenglin Yang , Papungkorn Sangsawad , Phanthipha Laosam , Yingping Tian , Xu Wang , Muhammad Arif , Fuping Zhang
The effects of Phellinus linteus polysaccharides (PLP) on the immune responses of laying hens remain unclear. This study systematically investigated the impacts of PLP on productive performance, antioxidant status, immune response, cecal microbiota, short-chain fatty acids (SCFAs), jejunal morphology, and metabolism in laying hens challenged with lipopolysaccharide (LPS). A total of 240 Changshun green-shell laying hens were randomly assigned to 4 treatments (6 replicates × 10 hens): CON group (basal diet), PLP group (basal diet + 4.2 g/kg PLP), LPS group (basal diet + 1 mg/kg LPS), and LPS+PLP group (basal diet + 4.2 g/kg PLP + 1 mg/kg LPS). The results demonstrated that LPS challenge significantly reduced laying rate, albumen height, Haugh unit, and yolk total amino acid contents (P < 0.05). Conversely, PLP supplementation increased laying rate, yolk weight, and total essential amino acid content in yolk (P < 0.05). Regardless of LPS challenge, PLP significantly elevated serum total antioxidant capacity (T-AOC), total superoxide dismutase (T-SOD), and IgA (P < 0.05). LPS decreased hepatic T-AOC and glutathione peroxidase (GSH-Px) activities (P < 0.05), whereas PLP increased hepatic T-AOC and GSH-Px (P < 0.05). A significant PLP × LPS interaction was observed for serum and hepatic malondialdehyde (MDA), with PLP reversing LPS-induced MDA accumulation (P < 0.05). We found that PLP markedly reduced hepatic pro-inflammatory cytokines (IL-6, IL-1β, and TNF-α) and increased anti-inflammatory cytokines IL-10, irrespective of LPS (P < 0.05). Moreover, PLP increased cecal acetate and butyrate concentrations and improved jejunal morphology by increasing villus height and villus height/crypt depth ratio (P < 0.05), independent of LPS. Microbiota profiling showed that PLP enriched beneficial taxa, including Lactobacillus, Alloprevotella, and Faecalibacterium under LPS challenge and increased Faecalibacterium prausnitzii abundance regardless of LPS (P < 0.05). Metabolomics suggested that PLP modulated arginine and proline metabolism irrespective of LPS, and regulated α-linolenic acid and arachidonic acid metabolism, as well as MAPK and calcium signaling pathways under LPS stimulation. Collectively, PLP may alleviate LPS-induced impairment and support gut-liver health, potentially by enriching SCFA-producing bacteria and enhancing SCFA production, indicating its promise as a functional feed additive to improve overall performance in laying hens.
茶树多糖(PLP)对蛋鸡免疫应答的影响尚不清楚。本研究系统地研究了PLP对脂多糖(LPS)刺激下蛋鸡生产性能、抗氧化状态、免疫反应、盲肠菌群、短链脂肪酸(SCFAs)、空肠形态和代谢的影响。选取240只长顺绿壳蛋鸡,随机分为4个处理(6个重复× 10只鸡):CON组(基础饲粮)、PLP组(基础饲粮+ 4.2 g/kg PLP)、LPS组(基础饲粮+ 1 mg/kg LPS)和LPS+PLP组(基础饲粮+ 4.2 g/kg PLP + 1 mg/kg LPS)。结果表明,LPS显著降低了产蛋率、蛋白高度、哈氏单位和蛋黄总氨基酸含量(P < 0.05)。相反,添加PLP可提高产蛋率、蛋黄重和蛋黄总必需氨基酸含量(P < 0.05)。无论LPS是否存在,PLP均显著提高血清总抗氧化能力(T-AOC)、总超氧化物歧化酶(T-SOD)和IgA (P < 0.05)。LPS降低肝脏T-AOC和谷胱甘肽过氧化物酶(GSH-Px)活性(P < 0.05), PLP提高肝脏T-AOC和谷胱甘肽过氧化物酶(GSH-Px)活性(P < 0.05)。PLP与LPS对血清和肝脏丙二醛(MDA)有显著的相互作用,PLP逆转了LPS诱导的MDA积累(P < 0.05)。我们发现,与LPS无关,PLP显著降低肝脏促炎因子(IL-6、IL-1β和TNF-α),增加抗炎因子IL-10 (P < 0.05)。此外,PLP通过增加绒毛高度和绒毛高度/隐窝深度比(P < 0.05)提高盲肠乙酸盐和丁酸盐浓度,改善空肠形态(P < 0.05),与LPS无关。微生物群分析显示,在LPS刺激下,PLP丰富了有益类群,包括乳酸菌、异prevotella和Faecalibacterium,并增加了prausnitzii Faecalibacterium的丰度(P < 0.05)。代谢组学研究表明,在LPS的刺激下,PLP调节了精氨酸和脯氨酸的代谢,并调节了α-亚麻酸和花生四烯酸的代谢,以及MAPK和钙信号通路。综上所述,PLP可能通过丰富产SCFA的细菌和提高SCFA的产量来减轻lps引起的损伤,并支持肠道-肝脏健康,这表明PLP作为功能性饲料添加剂有望提高蛋鸡的整体生产性能。
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引用次数: 0
Mechanisms of deoxynivalenol-induced multi-organ toxicity in broiler chickens: The central role of the Rap1/MAPK pathway revealed by network pharmacology and molecular docking 脱氧雪腐镰刀醇诱导肉鸡多器官毒性的机制:网络药理学和分子对接揭示Rap1/MAPK通路的核心作用
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-22 DOI: 10.1016/j.psj.2026.106494
Cuicui Zhuang, YongJun Yu, Jiangang Bai, Tianyu Yang, Xinying Zhang, Jinxin He, Shaopeng Gu
Deoxynivalenol (DON), a prevalent mycotoxin contaminating agricultural commodities worldwide, poses substantial risks to both public health and animal production. While recognized as a primary contaminant in chicken feed, the mechanistic basis of its multi-organ toxicity remains incompletely elucidated. This study employed an integrated approach combining network pharmacology, molecular docking, in silico ADME prediction, and in vivo experiments to systematically investigate the common molecular mechanisms underlying DON-induced damage in broilers, focusing on the liver, spleen, breast muscle, and cecum. Bioinformatic analysis identified 20 core target genes, with KEGG enrichment highlighting the MAPK and Rap1 signalling pathways as central regulatory hubs. In vivo results demonstrated that DON exposure significantly compromised growth performance, evident through reduced body weight and organ coefficients. Histopathological and serological analyses confirmed extensive tissue damage: hepatic injury (elevated AST/ALT, structural lesions), immunotoxicity (increased IgA/IgM, splenic abnormalities), myotoxicity (elevated CK/LDH, muscle degeneration), and intestinal inflammation (upregulated IL-1β/TNF-α, villous atrophy). Critically, DON dysregulated the expression of eight key genes within the MAPK/Rap1 axis, upregulating BRAF, CDC42, CSF1R, IKBKB, PDGFRA, and THBS1 while downregulating IGF1R and MAP2K1, along with increased phosphorylated MAPK protein level. Molecular docking simulations further validated strong binding affinities between DON and these core targets. Complementary ADME prediction further supported the physiological plausibility of these interactions, indicating DON's favorable drug-likeness and potential for intracellular target accessibility. Collectively, this work establishes that DON induces coordinated multi-organ toxicity in broilers primarily through regulation of the Rap1/MAPK signalling network, providing a crucial theoretical foundation for developing targeted interventions against DON exposure in (especially poultry) production, food safety and beyond.
脱氧雪腐镰刀菌醇(DON)是一种普遍存在的真菌毒素,污染世界各地的农产品,对公共卫生和动物生产构成重大风险。虽然被认为是鸡饲料中的主要污染物,但其多器官毒性的机制基础仍未完全阐明。本研究采用网络药理学、分子对接、计算机ADME预测和体内实验相结合的综合方法,以肝、脾、胸肌和盲肠为重点,系统探讨了don诱导肉鸡损伤的常见分子机制。生物信息学分析确定了20个核心靶基因,KEGG富集突出了MAPK和Rap1信号通路作为中心调控枢纽。体内实验结果表明,DON暴露会显著影响生长性能,表现为体重和器官系数的降低。组织病理学和血清学分析证实了广泛的组织损伤:肝损伤(AST/ALT升高,结构性病变)、免疫毒性(IgA/IgM升高,脾脏异常)、肌毒性(CK/LDH升高,肌肉变性)和肠道炎症(IL-1β/TNF-α上调,绒毛萎缩)。关键的是,DON失调了MAPK/Rap1轴上8个关键基因的表达,上调了BRAF、CDC42、CSF1R、IKBKB、PDGFRA和THBS1,下调了IGF1R和MAP2K1,磷酸化的MAPK蛋白水平也增加了。分子对接模拟进一步验证了DON与这些核心靶点之间的强结合亲和力。互补ADME预测进一步支持了这些相互作用的生理合理性,表明DON具有良好的药物相似性和细胞内靶点可及性的潜力。总的来说,这项工作确定了DON主要通过调节Rap1/MAPK信号网络诱导肉鸡的协调多器官毒性,为开发针对(特别是家禽)生产、食品安全等方面DON暴露的靶向干预措施提供了重要的理论基础。
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引用次数: 0
Research Note: An in vitro hypothalamic slice culture model from adult geese for investigating light-mediated regulation of avian reproduction 研究说明:建立成年鹅下丘脑离体切片培养模型,研究光介导对鸟类繁殖的调节作用
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-22 DOI: 10.1016/j.psj.2026.106497
Jie Liu , Jie Du , Yuyan Feng , Xiaojing Chen , Haiyue Mei , Binbin Guo , Zichun Dai , Huanxi Zhu
The avian hypothalamus regulates reproduction by integrating light signals through deep brain photoreceptors, yet suitable adult in vitro models remain lacking. In this study, we established a functional hypothalamic slice culture system from adult geese. Slices (300 µm thick) remained viable for over one week. Light exposure, particularly 12 h of light stimulation, significantly upregulated the expression of photoreceptors opn5 and opn4, as well as key signaling genes TSH and DIO2. Meanwhile, important reproductive regulatory genes GnRH and GnIH exhibited opposite expression patterns in response to light. These preliminary findings demonstrate that cultured adult avian hypothalamic slices not only retain photosensitivity and express relevant phototransduction and reproduction-related genes, but also undergo changes consistent with in vivo responses upon external light stimulation. In summary, this model promises to serve as an ideal system for studying photoneuroendocrine regulation.
鸟类下丘脑通过脑深部光感受器整合光信号来调节生殖,但目前还缺乏合适的成体体外模型。本研究建立了成年鹅下丘脑功能切片培养体系。切片(300µm厚)可存活一周以上。光暴露,特别是12小时的光刺激,显著上调光感受器opn5和opn4的表达,以及关键信号基因TSH和DIO2的表达。同时,重要的生殖调控基因GnRH和GnIH在光照下表现出相反的表达模式。这些初步研究结果表明,体外培养的成年禽下丘脑切片不仅保留了光敏性,表达了相关的光传导和生殖相关基因,而且在外界光刺激下发生了与体内反应一致的变化。综上所述,该模型有望成为研究光子神经内分泌调节的理想系统。
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引用次数: 0
Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in geese ovarian development from the birth /laying to ceased periods 综合分析circRNA、miRNA和mRNA谱,揭示ceRNA在鹅卵巢从出生/产蛋到停产期发育中的调控作用。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-22 DOI: 10.1016/j.psj.2026.106498
J.H. Fan , X.J. Li , M.M. Hou , W.W. Cai , X.W. Tong , M. Ren , C.S. Jiang , S.H. Li
Laying performance is a key metric for assessing avian reproductive efficiency. Ovarian tissues from Wanxi White Geese (WWGs) at different laying stages (birth period, laying period, and ceased period) were used in this study as research subjects. mRNA and circRNA expression profiles of ovarian tissues were constructed across various laying phases using transcriptome sequencing technology and bioinformatics approaches. The results revealed a total of 504 differentially expressed circRNAs (DEcircRNAs) (BO vs LO), 369 DEcircRNAs (LO vs CO), and 306 DEcircRNAs (BO vs CO) across different laying stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses demonstrated that DEcircRNA target genes were significantly enriched in processes including ovarian granulosa-cell proliferation, apoptosis, differentiation, and folliculogenesis. Concurrently, these targets were prominently implicated in phosphoinositide metabolism and played key roles in the GnRH, MAPK, and p53 signaling pathways. The expression of DEGs and proteins in ovarian tissues at different laying periods was detected by qRT-PCR technology and Western blot technology respectively. The results showed that the sequencing results were true and reliable. A ceRNA (circRNA-miRNA-mRNA) network was successfully constructed, and four key ceRNA regulatory axes implicated in ovarian development and steroid hormone synthesis/secretion were identified, namely novel_circ_107999-miR-1 44-y-NR2F2/TGM2, novel_circ_072697-miR-143-x-FMN2, novel_circ_031722-miR-101-x-CASP2/RPN 2, and novel_circ_100886-miR-101-y-PTX3/SEMA3 E/HSD3B1. The dual-luciferase reporter gene assay confirmed a targeting relationship between the novel_circ_072697-miR-143-x-FMN2 axis. In conclusion, this study system-atically explored the coordinated regulatory mechanisms of DEcircRNAs and their target genes, providing a theoretical foundation for identifying the key genes and molecular mechanisms underlying ovarian development in WWGs across different laying stages. These findings advance our understanding of the biological features of seasonal reproduction in this species and offer valuable insights for enhancing avian reproductive performance.
产蛋性能是衡量禽类繁殖效率的重要指标。本研究以万西白鹅不同产蛋阶段(出生期、产蛋期和停蛋期)的卵巢组织为研究对象。利用转录组测序技术和生物信息学方法构建了不同产蛋期卵巢组织mRNA和circRNA的表达谱。结果显示,在不同的产蛋阶段,共有504个差异表达的环状rna (DEcircRNAs) (BO vs LO)、369个差异表达的DEcircRNAs (LO vs CO)和306个差异表达的DEcircRNAs (BO vs CO)。基因本体(GO)和京都基因与基因组百科全书(KEGG)分析表明,DEcircRNA靶基因在卵巢颗粒细胞增殖、凋亡、分化和卵泡形成等过程中显著富集。同时,这些靶点与磷酸肌肽代谢密切相关,并在GnRH、MAPK和p53信号通路中发挥关键作用。采用qRT-PCR技术和Western blot技术分别检测不同产蛋期卵巢组织中DEGs和蛋白的表达。结果表明,测序结果真实可靠。我们成功构建了一个ceRNA (circRNA-miRNA-mRNA)网络,并鉴定了涉及卵巢发育和类固醇激素合成/分泌的四个关键ceRNA调控轴,即novel_circ_107999-miR-1 44-y-NR2F2/TGM2、novel_circ_072697-miR-143-x-FMN2、novel_circ_031722-miR-101-x-CASP2/ rpn2和novel_circ_100886-miR-101-y-PTX3/SEMA3 E/HSD3B1。双荧光素酶报告基因测定证实了novel_circ_072697-miR-143-x-FMN2轴之间的靶向关系。综上所述,本研究系统探索了DEcircRNAs及其靶基因的协同调控机制,为确定不同产蛋阶段WWGs卵巢发育的关键基因和分子机制提供了理论基础。这些发现促进了我们对该物种季节性繁殖的生物学特征的理解,并为提高鸟类繁殖性能提供了有价值的见解。
{"title":"Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in geese ovarian development from the birth /laying to ceased periods","authors":"J.H. Fan ,&nbsp;X.J. Li ,&nbsp;M.M. Hou ,&nbsp;W.W. Cai ,&nbsp;X.W. Tong ,&nbsp;M. Ren ,&nbsp;C.S. Jiang ,&nbsp;S.H. Li","doi":"10.1016/j.psj.2026.106498","DOIUrl":"10.1016/j.psj.2026.106498","url":null,"abstract":"<div><div>Laying performance is a key metric for assessing avian reproductive efficiency. Ovarian tissues from Wanxi White Geese (WWGs) at different laying stages (birth period, laying period, and ceased period) were used in this study as research subjects. mRNA and circRNA expression profiles of ovarian tissues were constructed across various laying phases using transcriptome sequencing technology and bioinformatics approaches. The results revealed a total of 504 differentially expressed circRNAs (DEcircRNAs) (BO vs LO), 369 DEcircRNAs (LO vs CO), and 306 DEcircRNAs (BO vs CO) across different laying stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses demonstrated that DEcircRNA target genes were significantly enriched in processes including ovarian granulosa-cell proliferation, apoptosis, differentiation, and folliculogenesis. Concurrently, these targets were prominently implicated in phosphoinositide metabolism and played key roles in the GnRH, MAPK, and p53 signaling pathways. The expression of DEGs and proteins in ovarian tissues at different laying periods was detected by qRT-PCR technology and Western blot technology respectively. The results showed that the sequencing results were true and reliable. A ceRNA (circRNA-miRNA-mRNA) network was successfully constructed, and four key ceRNA regulatory axes implicated in ovarian development and steroid hormone synthesis/secretion were identified, namely novel_circ_107999-miR-1 44-y-<em>NR2F2/TGM2</em>, novel_circ_072697-miR-143-x-<em>FMN2</em>, novel_circ_031722-miR-101-x-<em>CASP2/RPN 2</em>, and novel_circ_100886-miR-101-y-<em>PTX3/SEMA3 E/HSD3B1</em>. The dual-luciferase reporter gene assay confirmed a targeting relationship between the novel_circ_072697-miR-143-x-<em>FMN2</em> axis. In conclusion, this study system-atically explored the coordinated regulatory mechanisms of DEcircRNAs and their target genes, providing a theoretical foundation for identifying the key genes and molecular mechanisms underlying ovarian development in WWGs across different laying stages. These findings advance our understanding of the biological features of seasonal reproduction in this species and offer valuable insights for enhancing avian reproductive performance.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106498"},"PeriodicalIF":4.2,"publicationDate":"2026-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146113995","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of probiotic supplementation on growth performance, intestinal barrier function, and oxidative stress in broiler chickens fed a deoxynivalenol-contaminated diet 饲粮中添加益生菌对脱氧雪腐菌醇污染肉鸡生长性能、肠道屏障功能和氧化应激的影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-22 DOI: 10.1016/j.psj.2026.106501
Kouassi R. Kpodo , Yuguo H. Tompkins , Katarzyna B. Miska , Monika Proszkowiec-Weglarz , Olga A. Postnikova , Drew E. Olson , Trevor R. Mitchell , Anthony E. Glenn
The mycotoxin deoxynivalenol (DON) contaminates chicken feed and negatively impacts intestinal health and overall production performance. The objective of this study was to investigate the effects of lactic acid bacteria and DON toxicity on production performance, intestinal morphology and absorptive function, and oxidative stress in broiler chickens. A total of 432 day-old-Ross 308 chicks were assigned to treatments arranged as a 2 × 3 factorial with mycotoxin (0 mg, noM; 5 mg/kg, M) and probiotic [0 cfu/kg, noP; 1.0 × 109 cfu/kg Lactobacillus acidophilus (LA); or 1.0 × 107 cfu/kg FloraMax-PW (FM), made of LA and Pediococcus acidilactici] and raised for 22 days. Body weight, average daily gain, average daily feed intake, and feed conversion ratio (FCR) were not affected (P = 0.130) by mycotoxin or mycotoxin × probiotic interaction for any days. However, FCR was reduced (P = 0.050) in FM compared to noP for days 8-15. Mycotoxin reduced villus height and villus height-to-crypt depth ratio (P = 0.029 and P = 0.027, respectively) in the jejunum. The level of jejunal zonula occludens-2 mRNA was reduced (P = 0.040) in M+noP and M+LA compared to noM+noP, noM+FM, noM+LA, and M+FM chickens. Ileal occludin and zonula occludens-2 mRNA expressions were increased (P < 0.001 and P = 0.011, respectively) by mycotoxin, and claudin-1 expression was increased (P = 0.029) by FM. Immunoglobulin A mRNA expression was increased (P = 0.020) in FM compared to noP while that of polymeric immunoglobulin receptor was increased (P = 0.004) in FM and LA in the ileum. Plasma catalase activity was reduced (P < 0.001) in M+noP compared to other treatments while that of glutathione reductase was increased (P = 0.036) by DON. In conclusion, DON at 5 mg/kg of feed did not affect production performance, but reduced intestinal morphology, which was not prevented by probiotics. The supplementation of FM improved the overall oxidative status in response to DON. In addition, FM improved intestinal immune genes expression in the context of this study.
霉菌毒素脱氧雪腐镰刀菌醇(DON)污染鸡饲料并对肠道健康和整体生产性能产生负面影响。本试验旨在探讨乳酸菌和DON毒性对肉鸡生产性能、肠道形态和吸收功能以及氧化应激的影响。试验选取432只日龄罗斯308肉鸡,按霉菌毒素(0 mg, noM; 5 mg/kg, M)和益生菌(0 cfu/kg, noP;1.0 × 109 cfu/kg嗜酸乳杆菌(LA);或1.0 × 107 cfu/kg FloraMax-PW (FM),由LA和酸活性球球菌组成,饲养22 d。霉菌毒素或霉菌毒素与益生菌交互作用对仔猪体重、平均日增重、平均日采食量和饲料系数均无显著影响(P = 0.130)。然而,在第8-15天,FM组的FCR较noP组降低(P = 0.050)。霉菌毒素降低了空肠绒毛高度和绒毛高度与隐窝深度之比(P = 0.029和P = 0.027)。与noM+noP、noM+FM、noM+LA和M+FM相比,M+noP和M+LA组空肠闭塞带-2 mRNA水平降低(P = 0.040)。霉菌毒素增加了回肠occludin和occludens-2 mRNA的表达(P <; 0.001和P = 0.011), FM增加了claudin-1 mRNA的表达(P = 0.029)。回肠免疫球蛋白A mRNA表达量在FM和LA中均高于noP (P = 0.020),聚合免疫球蛋白受体mRNA表达量在FM和LA中均高于noP (P = 0.004)。与其他处理相比,M+noP组血浆过氧化氢酶活性降低(P < 0.001),而DON组血浆谷胱甘肽还原酶活性升高(P = 0.036)。综上所示,饲料中添加5 mg/kg的DON不影响生产性能,但会降低肠道形态,益生菌无法阻止这一现象。补充FM改善了对DON的整体氧化状态。此外,在本研究中,FM还可以改善肠道免疫基因的表达。
{"title":"Effects of probiotic supplementation on growth performance, intestinal barrier function, and oxidative stress in broiler chickens fed a deoxynivalenol-contaminated diet","authors":"Kouassi R. Kpodo ,&nbsp;Yuguo H. Tompkins ,&nbsp;Katarzyna B. Miska ,&nbsp;Monika Proszkowiec-Weglarz ,&nbsp;Olga A. Postnikova ,&nbsp;Drew E. Olson ,&nbsp;Trevor R. Mitchell ,&nbsp;Anthony E. Glenn","doi":"10.1016/j.psj.2026.106501","DOIUrl":"10.1016/j.psj.2026.106501","url":null,"abstract":"<div><div>The mycotoxin deoxynivalenol (<strong>DON</strong>) contaminates chicken feed and negatively impacts intestinal health and overall production performance. The objective of this study was to investigate the effects of lactic acid bacteria and DON toxicity on production performance, intestinal morphology and absorptive function, and oxidative stress in broiler chickens. A total of 432 day-old-Ross 308 chicks were assigned to treatments arranged as a 2 × 3 factorial with mycotoxin (0 mg, <strong>noM</strong>; 5 mg/kg, <strong>M</strong>) and probiotic [0 cfu/kg, <strong>noP</strong>; 1.0 × 10<sup>9</sup> cfu/kg <em>Lactobacillus acidophilus</em> (<strong>LA</strong>); or 1.0 × 10<sup>7</sup> cfu/kg FloraMax-PW (<strong>FM</strong>), made of LA and <em>Pediococcus acidilactici</em>] and raised for 22 days. Body weight, average daily gain, average daily feed intake, and feed conversion ratio (<strong>FCR</strong>) were not affected (<em>P</em> = 0.130) by mycotoxin or mycotoxin × probiotic interaction for any days. However, FCR was reduced (<em>P</em> = 0.050) in FM compared to noP for days 8-15. Mycotoxin reduced villus height and villus height-to-crypt depth ratio (<em>P</em> = 0.029 and <em>P</em> = 0.027, respectively) in the jejunum. The level of jejunal zonula occludens-2 mRNA was reduced (<em>P</em> = 0.040) in M+noP and M+LA compared to noM+noP, noM+FM, noM+LA, and M+FM chickens. Ileal occludin and zonula occludens-2 mRNA expressions were increased (<em>P</em> &lt; 0.001 and <em>P</em> = 0.011, respectively) by mycotoxin, and claudin-1 expression was increased (<em>P</em> = 0.029) by FM. Immunoglobulin A mRNA expression was increased (<em>P</em> = 0.020) in FM compared to noP while that of polymeric immunoglobulin receptor was increased (<em>P</em> = 0.004) in FM and LA in the ileum. Plasma catalase activity was reduced (<em>P</em> &lt; 0.001) in M+noP compared to other treatments while that of glutathione reductase was increased (<em>P</em> = 0.036) by DON. In conclusion, DON at 5 mg/kg of feed did not affect production performance, but reduced intestinal morphology, which was not prevented by probiotics. The supplementation of FM improved the overall oxidative status in response to DON. In addition, FM improved intestinal immune genes expression in the context of this study.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106501"},"PeriodicalIF":4.2,"publicationDate":"2026-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146080185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Poultry Science
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