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Combined effects of incubation temperature and lipopolysaccharide exposure on immune response modulation in the quail gut 孵育温度和脂多糖暴露对鹌鹑肠道免疫反应调节的联合影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-13 DOI: 10.1016/j.psj.2026.106418
Juliana dos Santos Conceição , Angélica de Souza Khatlab , Eliane Gasparino , Thais Pacheco Santana , Amanda Silva Carvalho , Marcus Vinicius de Aragão Batista , Marcelo Santana Filho , Simone Eliza Facioni Guimaraes , Jodnes Sobreira Vieira , Ana Paula Del Vesco
Embryogenesis is a critical programming window in birds, during which environmental factors can reshape gene expression and influence adaptive capacity after hatching. However, little is known about how embryonic thermal manipulation modulates intestinal immune and metabolic responses to inflammatory challenge later in life. This study evaluated the effects of embryonic thermal manipulation on the intestinal transcriptomic response of Japanese quail (Coturnix coturnix japonica) challenged with lipopolysaccharide (LPS). A 2 × 2 factorial design was applied, including two incubation temperatures (control – 37.5°C; high – 39°C) and two challenge conditions (LPS and saline solution). At 25 days post-hatch, jejunum samples were collected after inoculation and subjected to RNA-seq analysis. High incubation temperature significantly reduced (p<0.05) hatchability but did not affect embryo morphology. Under control temperature, LPS induced differential expression of 41 genes (adjusted-p<0.05), including IL1R2, IL18BP, and S100A12, associated with inflammatory modulation and mucosal integrity. In contrast, high-temperature incubation triggered a broad transcriptomic reprogramming in response to LPS, with activation of inflammatory pathways, metabolic processes (glycolysis, Krebs cycle, pentose metabolism), lipid homeostasis, and vesicular trafficking, while simultaneously suppressing genes involved in adaptive immunity, angiogenesis, cell differentiation, and epigenetic regulation. A conserved set of inflammatory genes, including MMP7, PI3, and SLC6A14, was regulated under both thermal conditions, suggesting activation of central defense mechanisms. In conclusion, embryonic thermal manipulation did not change gross embryonic phenotype but markedly altered the magnitude and direction of intestinal gene expression responses to LPS, indicating a shift toward an innate inflammatory–metabolic profile at the expense of adaptive immune-related pathways.
胚胎发生是鸟类一个重要的编程窗口期,在此期间,环境因素可以重塑基因表达并影响孵化后的适应能力。然而,关于胚胎热操作如何调节肠道免疫和代谢反应以应对生命后期的炎症挑战,我们知之甚少。本研究评价了胚胎热处理对脂多糖(LPS)刺激下日本鹌鹑肠道转录组反应的影响。采用2 × 2因子设计,包括两种孵育温度(对照- 37.5°C;高- 39°C)和两种激发条件(LPS和生理盐水)。孵化后25 d,接种后采集空肠标本,进行RNA-seq分析。高孵育温度显著降低了孵化率(p<0.05),但对胚胎形态没有影响。在控制温度下,LPS诱导41个与炎症调节和粘膜完整性相关的基因差异表达(调整-p<;0.05),包括IL1R2、IL18BP和S100A12。相比之下,高温培养引发了广泛的转录组重编程,以响应LPS,激活炎症途径、代谢过程(糖酵解、克雷布斯循环、戊糖代谢)、脂质稳态和囊泡运输,同时抑制参与适应性免疫、血管生成、细胞分化和表观遗传调控的基因。一组保守的炎症基因,包括MMP7、PI3和SLC6A14,在两种热条件下都受到调节,表明中枢防御机制被激活。综上所述,胚胎热处理并没有改变胚胎的总体表型,但显著改变了肠道基因对LPS的表达反应的大小和方向,表明以牺牲适应性免疫相关途径为代价,向先天炎症代谢谱转变。
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引用次数: 0
Metagenomic insights into the influence of goose farming on the gut microbiome and antibiotic resistome of workers 宏基因组研究鹅养殖对工人肠道微生物群和抗生素抗性组的影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-20 DOI: 10.1016/j.psj.2026.106487
Yuqing Hao , Yuan Li , Fang Liu, Jinzhao Long, Haiyan Yang
Antimicrobial resistance (AMR) seriously threatens the health of humans and animals. Antibiotic-resistant bacteria (ARB) and antibiotic resistance genes (ARGs) were enriched in the goose farms. However, the influence of goose farming exposure on the gut microbiota and ARGs of workers was unclear. In this study, metagenomic analysis was used to characterize gut microbiome structures, annotate bacterial taxa, and quantify the abundances of ARGs and MGEs in geese and human samples. Results showed that goose feces harbored more abundant ARGs and ARB than human feces. Significantly higher abundances of special ARGs (such as vanY, lsaE, AAC3-IId and ampC) were identified in workers compared to villagers. Compositions of gut bacteria were significantly different between workers and villagers, and some certain gut pathogens were abundant in the feces of workers, including Bacillus anthracis, Clostridium perfringens, and Escherichia coli O45:K1:H7. A total of 51 ARGs were pinpointed in the metagenome-assembled genomes (MAGs). Based on ARG-MGE associations and co-occurrence signals in MAGs, the potential for horizontal gene transfer (HGT) was inferred. With this transfer capacity and ubiquitous gut colonization, E. coli carrying 38 ARGs is proposed as a putative AMR indicator for the goose farm. This study demonstrates that goose farming had non-ignorable influences on the gut microbiome and antibiotic resistome of workers. More efforts should be made to control the ARGs and ARB in the goose farm.
抗生素耐药性(AMR)严重威胁着人类和动物的健康。鹅场中抗生素耐药菌(ARB)和抗生素耐药基因(ARGs)富集。然而,鹅养殖暴露对工人肠道微生物群和ARGs的影响尚不清楚。本研究采用宏基因组分析方法对鹅和人的肠道微生物组结构进行了表征,对细菌分类群进行了注释,并对ARGs和MGEs的丰度进行了量化。结果表明,鹅粪中ARGs和ARB的含量高于人粪。与村民相比,工人中发现的特殊ARGs(如vanY、lsaE、AAC3-IId和ampC)的丰度明显更高。工人与村民肠道菌群组成差异显著,工人粪便中大量存在炭疽芽孢杆菌、产气荚膜梭菌、大肠杆菌O45:K1:H7等肠道病原菌。在宏基因组组装基因组(MAGs)中共确定了51个ARGs。基于ARG-MGE的关联和MAGs中的共现信号,推测了水平基因转移(HGT)的可能性。由于这种转移能力和普遍存在的肠道定植,携带38种ARGs的大肠杆菌被提议作为鹅场的推定抗菌素耐药性指标。本研究表明,养鹅对工人的肠道微生物群和抗生素抵抗组有不可忽视的影响。应加强对鹅场arg和ARB的控制。
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引用次数: 0
Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in geese ovarian development from the birth /laying to ceased periods 综合分析circRNA、miRNA和mRNA谱,揭示ceRNA在鹅卵巢从出生/产蛋到停产期发育中的调控作用。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-22 DOI: 10.1016/j.psj.2026.106498
J.H. Fan , X.J. Li , M.M. Hou , W.W. Cai , X.W. Tong , M. Ren , C.S. Jiang , S.H. Li
Laying performance is a key metric for assessing avian reproductive efficiency. Ovarian tissues from Wanxi White Geese (WWGs) at different laying stages (birth period, laying period, and ceased period) were used in this study as research subjects. mRNA and circRNA expression profiles of ovarian tissues were constructed across various laying phases using transcriptome sequencing technology and bioinformatics approaches. The results revealed a total of 504 differentially expressed circRNAs (DEcircRNAs) (BO vs LO), 369 DEcircRNAs (LO vs CO), and 306 DEcircRNAs (BO vs CO) across different laying stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses demonstrated that DEcircRNA target genes were significantly enriched in processes including ovarian granulosa-cell proliferation, apoptosis, differentiation, and folliculogenesis. Concurrently, these targets were prominently implicated in phosphoinositide metabolism and played key roles in the GnRH, MAPK, and p53 signaling pathways. The expression of DEGs and proteins in ovarian tissues at different laying periods was detected by qRT-PCR technology and Western blot technology respectively. The results showed that the sequencing results were true and reliable. A ceRNA (circRNA-miRNA-mRNA) network was successfully constructed, and four key ceRNA regulatory axes implicated in ovarian development and steroid hormone synthesis/secretion were identified, namely novel_circ_107999-miR-1 44-y-NR2F2/TGM2, novel_circ_072697-miR-143-x-FMN2, novel_circ_031722-miR-101-x-CASP2/RPN 2, and novel_circ_100886-miR-101-y-PTX3/SEMA3 E/HSD3B1. The dual-luciferase reporter gene assay confirmed a targeting relationship between the novel_circ_072697-miR-143-x-FMN2 axis. In conclusion, this study system-atically explored the coordinated regulatory mechanisms of DEcircRNAs and their target genes, providing a theoretical foundation for identifying the key genes and molecular mechanisms underlying ovarian development in WWGs across different laying stages. These findings advance our understanding of the biological features of seasonal reproduction in this species and offer valuable insights for enhancing avian reproductive performance.
产蛋性能是衡量禽类繁殖效率的重要指标。本研究以万西白鹅不同产蛋阶段(出生期、产蛋期和停蛋期)的卵巢组织为研究对象。利用转录组测序技术和生物信息学方法构建了不同产蛋期卵巢组织mRNA和circRNA的表达谱。结果显示,在不同的产蛋阶段,共有504个差异表达的环状rna (DEcircRNAs) (BO vs LO)、369个差异表达的DEcircRNAs (LO vs CO)和306个差异表达的DEcircRNAs (BO vs CO)。基因本体(GO)和京都基因与基因组百科全书(KEGG)分析表明,DEcircRNA靶基因在卵巢颗粒细胞增殖、凋亡、分化和卵泡形成等过程中显著富集。同时,这些靶点与磷酸肌肽代谢密切相关,并在GnRH、MAPK和p53信号通路中发挥关键作用。采用qRT-PCR技术和Western blot技术分别检测不同产蛋期卵巢组织中DEGs和蛋白的表达。结果表明,测序结果真实可靠。我们成功构建了一个ceRNA (circRNA-miRNA-mRNA)网络,并鉴定了涉及卵巢发育和类固醇激素合成/分泌的四个关键ceRNA调控轴,即novel_circ_107999-miR-1 44-y-NR2F2/TGM2、novel_circ_072697-miR-143-x-FMN2、novel_circ_031722-miR-101-x-CASP2/ rpn2和novel_circ_100886-miR-101-y-PTX3/SEMA3 E/HSD3B1。双荧光素酶报告基因测定证实了novel_circ_072697-miR-143-x-FMN2轴之间的靶向关系。综上所述,本研究系统探索了DEcircRNAs及其靶基因的协同调控机制,为确定不同产蛋阶段WWGs卵巢发育的关键基因和分子机制提供了理论基础。这些发现促进了我们对该物种季节性繁殖的生物学特征的理解,并为提高鸟类繁殖性能提供了有价值的见解。
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引用次数: 0
Antimicrobial resistance and genomic characteristics of avian Pasteurella multocida 禽多杀性巴氏杆菌的耐药性及基因组特征。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-28 DOI: 10.1016/j.psj.2026.106524
Fengcheng Miao , Bing Dai , Zhiyu Li , Kaikai Lv , Junxing Li , Shuangmao Li , Shuaijie Song , Huafeng Jian , Xiaoqian Long , Yao Shen , Yinghui Wei , Hua Yang , Jiangang Ma

Background

Pasteurella multocida, the cause of fowl cholera, poses a significant economic threat to poultry. The escalation of antimicrobial resistance (AMR) in this pathogen, driven by drug misuse, is a serious concern. Crucially, a comprehensive understanding of AMR patterns, molecular epidemiology, and virulence in Chinese avian strains is still lacking. This study aimed to elucidate the phenotypic and genomic characteristics of P. multocida strains isolated from avian in Zhejiang Province, China.

Result

Twenty avian-origin P. multocida strains isolated in Zhejiang Province were subjected to antimicrobial susceptibility testing, whole-genome sequencing, and virulence assessment. Resistance was most frequent to florfenicol (65%) and tetracycline (50%). Multi-Locus Sequence Typing analysis revealed that ST471 and its closely related variant ST129 collectively constituted the dominant clonal group. A total of 13 resistance genes belonging to 5 major classes were identified, with floR (75%), sul2 (50%), and tet (B) (50%) exhibiting the highest prevalence. In the Galleria mellonella model challenged with 1.5 × 10⁷ CFU/larva, ST471 strains exhibited a slower killing rate compared to ST129 strains, while the ST7 strain demonstrated low virulence.

Conclusion

This study demonstrates the increasing prevalence of avian P. multocida in China, specifically the sustained circulation of ST129 and the recent emergence of ST471, particularly in ducks. These findings underscore the urgency of continuous monitoring of strain dissemination and the evolution of multidrug resistance, providing a scientific basis for precise and rational antimicrobials use in farms and for blocking the spread of potentially high-risk strains.
背景:多杀性巴氏杆菌是禽类霍乱的病因,对家禽造成重大的经济威胁。在药物滥用的驱动下,这种病原体的抗菌素耐药性(AMR)的升级是一个严重的问题。至关重要的是,对中国禽流感菌株的AMR模式、分子流行病学和毒力的全面了解仍然缺乏。本研究旨在阐明浙江省禽源多杀假单胞菌的表型和基因组特征。结果:对浙江省分离的20株禽源多杀假单胞菌进行了药敏试验、全基因组测序和毒力评价。耐药最常见的是氟苯尼考(65%)和四环素(50%)。多位点序列分型分析表明,ST471及其近缘变异ST129共同构成优势克隆群。共鉴定出5大类13个耐药基因,其中以floR(75%)、sul2(50%)和tet (B)(50%)患病率最高。在1.5 × 10⁷CFU/幼虫攻毒的mellonella Galleria模型中,与ST129菌株相比,ST471菌株表现出较慢的杀伤率,而ST7菌株表现出较低的毒力。结论:本研究表明中国禽类多杀假单胞菌的流行正在增加,特别是ST129的持续流行和ST471的最近出现,特别是在鸭子中。这些发现强调了持续监测菌株传播和多药耐药性演变的紧迫性,为在农场精确合理地使用抗菌素和阻止潜在高风险菌株的传播提供了科学依据。
{"title":"Antimicrobial resistance and genomic characteristics of avian Pasteurella multocida","authors":"Fengcheng Miao ,&nbsp;Bing Dai ,&nbsp;Zhiyu Li ,&nbsp;Kaikai Lv ,&nbsp;Junxing Li ,&nbsp;Shuangmao Li ,&nbsp;Shuaijie Song ,&nbsp;Huafeng Jian ,&nbsp;Xiaoqian Long ,&nbsp;Yao Shen ,&nbsp;Yinghui Wei ,&nbsp;Hua Yang ,&nbsp;Jiangang Ma","doi":"10.1016/j.psj.2026.106524","DOIUrl":"10.1016/j.psj.2026.106524","url":null,"abstract":"<div><h3>Background</h3><div><em>Pasteurella multocida</em>, the cause of fowl cholera, poses a significant economic threat to poultry. The escalation of antimicrobial resistance (AMR) in this pathogen, driven by drug misuse, is a serious concern. Crucially, a comprehensive understanding of AMR patterns, molecular epidemiology, and virulence in Chinese avian strains is still lacking<em>.</em> This study aimed to elucidate the phenotypic and genomic characteristics of <em>P. multocida</em> strains isolated from avian in Zhejiang Province, China.</div></div><div><h3>Result</h3><div>Twenty avian-origin <em>P. multocida</em> strains isolated in Zhejiang Province were subjected to antimicrobial susceptibility testing, whole-genome sequencing, and virulence assessment. Resistance was most frequent to florfenicol (65%) and tetracycline (50%). Multi-Locus Sequence Typing analysis revealed that ST471 and its closely related variant ST129 collectively constituted the dominant clonal group. A total of 13 resistance genes belonging to 5 major classes were identified, with <em>floR</em> (75%), <em>sul2</em> (50%), and <em>tet</em> (B) (50%) exhibiting the highest prevalence. In the <em>Galleria mellonella</em> model challenged with 1.5 × 10⁷ CFU/larva, ST471 strains exhibited a slower killing rate compared to ST129 strains, while the ST7 strain demonstrated low virulence.</div></div><div><h3>Conclusion</h3><div>This study demonstrates the increasing prevalence of avian <em>P. multocida</em> in China, specifically the sustained circulation of ST129 and the recent emergence of ST471, particularly in ducks. These findings underscore the urgency of continuous monitoring of strain dissemination and the evolution of multidrug resistance, providing a scientific basis for precise and rational antimicrobials use in farms and for blocking the spread of potentially high-risk strains.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106524"},"PeriodicalIF":4.2,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146119744","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of dietary myo-inositol supplementation on the expression of fibroblast growth factor 23 (FGF23) and αKlotho in two commercial laying hen strains 饲粮中添加肌醇对2个商品蛋鸡品系成纤维细胞生长因子23 (FGF23)和α - klotho表达的影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-27 DOI: 10.1016/j.psj.2026.106522
Leonie Meier , Ákos Szentgyörgyi , Nadine Wallauch , Martina Feger , Michael Oster , Vera Sommerfeld , Sonja Schmucker , Korinna Huber , Volker Stefanski , Klaus Wimmers , Markus Rodehutscord , Michael Föller
Phosphate homeostasis is controlled by fibroblast growth factor 23 (FGF23) produced by bone cells in mammals and primarily acting in the kidney. For its phosphaturic effect and for suppression of production of active vitamin D, it requires αKlotho as a co-receptor. FGF23 and αKlotho have emerged as disease biomarkers. Relatively little is known about their significance in laying hens that are in particular need of balanced mineral homeostasis for eggshell formation. Dietary myo-inositol (MI) and phosphate metabolism are interdependent, and this study aimed to explore FGF23 and αKlotho expression in two commercial hen strains fed different amounts of MI. Forty Lohmann Brown Classic (LB) and Lohmann LSL-Classic (LSL) 26-week-old hens received standard diets with 0, 1, 2, or 3 g supplemental MI per kg feed for four weeks, and gene expression of FGF23 and αKlotho was measured by quantitative real-time PCR in different organs. Statistical analysis was performed with the MIXED procedure, and correlation analysis with markers of phosphate homeostasis and hepatic inflammation applying Pearson's correlation coefficient or Spearman's Rho. Three g supplemental MI per kg feed resulted in lower hepatic FGF23 expression only in LB hens. Regardless of MI supplementation, tibial FGF23 expression tended to be lower in LSL than LB hens. Moreover, supplemental MI did not significantly impact αKlotho expression, but hepatic αKlotho expression was higher in LSL than LB hens without MI supplementation and tibial and renal αKlotho expression was significantly higher in LB than in LSL hens, regardless of dietary MI. To summarize, MI supplements at 3 g/kg reduced hepatic FGF23 expression in LB, but not in LSL hens at the peak of egg-laying. Further studies might be needed to elucidate the effect before sexual maturity.
磷酸盐稳态由成纤维细胞生长因子23 (FGF23)控制,FGF23由哺乳动物骨细胞产生,主要作用于肾脏。由于其磷酸化作用和抑制活性维生素D的产生,它需要α - klotho作为辅助受体。FGF23和αKlotho已成为疾病生物标志物。相对而言,它们对蛋鸡的重要性知之甚少,因为蛋鸡特别需要平衡的矿物质来形成蛋壳。饲粮中肌醇(MI)和磷酸代谢是相互依赖的,本研究旨在探讨饲喂不同MI量的2个商业母鸡品系中FGF23和αKlotho的表达情况。40只26周龄的Lohmann Brown Classic (LB)和Lohmann LSL-Classic (LSL)分别饲喂每kg饲料添加0、1、2和3 g MI的标准饲粮4周后,采用实时荧光定量PCR技术检测FGF23和αKlotho基因在不同器官中的表达。采用MIXED程序进行统计分析,并使用Pearson相关系数或Spearman相关系数与磷酸盐稳态和肝脏炎症标志物进行相关性分析。每kg饲料中添加3 g MI仅在LB母鸡中降低肝脏FGF23表达。无论是否添加心肌梗死,LSL母鸡的胫骨FGF23表达水平往往低于LB母鸡。此外,添加MI对α - klotho表达无显著影响,但LSL母鸡肝脏α - klotho表达高于未添加MI的LB母鸡,而LB母鸡胫骨和肾脏α - klotho表达显著高于LSL母鸡,无论饲粮MI水平如何。综上所述,添加3g /kg MI可降低LB母鸡肝脏FGF23表达,但LSL母鸡产蛋高峰期FGF23表达无显著降低。可能需要进一步的研究来阐明性成熟前的影响。
{"title":"Effects of dietary myo-inositol supplementation on the expression of fibroblast growth factor 23 (FGF23) and αKlotho in two commercial laying hen strains","authors":"Leonie Meier ,&nbsp;Ákos Szentgyörgyi ,&nbsp;Nadine Wallauch ,&nbsp;Martina Feger ,&nbsp;Michael Oster ,&nbsp;Vera Sommerfeld ,&nbsp;Sonja Schmucker ,&nbsp;Korinna Huber ,&nbsp;Volker Stefanski ,&nbsp;Klaus Wimmers ,&nbsp;Markus Rodehutscord ,&nbsp;Michael Föller","doi":"10.1016/j.psj.2026.106522","DOIUrl":"10.1016/j.psj.2026.106522","url":null,"abstract":"<div><div>Phosphate homeostasis is controlled by fibroblast growth factor 23 (FGF23) produced by bone cells in mammals and primarily acting in the kidney. For its phosphaturic effect and for suppression of production of active vitamin D, it requires αKlotho as a co-receptor. FGF23 and αKlotho have emerged as disease biomarkers. Relatively little is known about their significance in laying hens that are in particular need of balanced mineral homeostasis for eggshell formation. Dietary <em>myo</em>-inositol (MI) and phosphate metabolism are interdependent, and this study aimed to explore FGF23 and αKlotho expression in two commercial hen strains fed different amounts of MI. Forty Lohmann Brown Classic (LB) and Lohmann LSL-Classic (LSL) 26-week-old hens received standard diets with 0, 1, 2, or 3 g supplemental MI per kg feed for four weeks, and gene expression of FGF23 and αKlotho was measured by quantitative real-time PCR in different organs. Statistical analysis was performed with the MIXED procedure, and correlation analysis with markers of phosphate homeostasis and hepatic inflammation applying Pearson's correlation coefficient or Spearman's Rho. Three g supplemental MI per kg feed resulted in lower hepatic FGF23 expression only in LB hens. Regardless of MI supplementation, tibial FGF23 expression tended to be lower in LSL than LB hens. Moreover, supplemental MI did not significantly impact αKlotho expression, but hepatic αKlotho expression was higher in LSL than LB hens without MI supplementation and tibial and renal αKlotho expression was significantly higher in LB than in LSL hens, regardless of dietary MI. To summarize, MI supplements at 3 g/kg reduced hepatic FGF23 expression in LB, but not in LSL hens at the peak of egg-laying. Further studies might be needed to elucidate the effect before sexual maturity.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106522"},"PeriodicalIF":4.2,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146126370","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Population genomic analysis of Weining chicken via dd-RAD sequencing: Unraveling diversity, structure, and selective sweeps
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-23 DOI: 10.1016/j.psj.2026.106499
Zhaobi Ai , Zhonglong Zhao , Xiben Zhang , Runqian Yang , Yong Zhang , Zelin Chen , Weibo Li , Yixing Ou , Lanying Lei , Hongying Ye
To characterize the genetic diversity and evolutionary patterns of four Weining chicken strains from Guizhou Province, China, we generated genome-wide single nucleotide polymorphisms (SNPs) using dd-RAD sequencing. We found that Weining chicken exhibited moderate genetic diversity, with observed heterozygosity (Ho = 0.267) lower than expected heterozygosity (He = 0.312) and a positive inbreeding coefficient (FIS ≈ 0.14), indicating some degree of inbreeding across the population. Among strains, HM showed the highest diversity while HT had the lowest. Analyses of population structure, phylogeny, principal component analysis, and admixture consistently revealed weak genetic differentiation (FST < 0.06) and frequent gene flow among strains. Kinship analysis demonstrated mostly low pairwise relatedness, with a minority of individuals exhibiting closer kinship. Selection signature scans identified multiple candidate regions; genes within these regions were significantly enriched for biological processes and pathways related to immune response (e.g., IL-17 signaling) and metabolic regulation (e.g., MAPK signaling), which were consistently highlighted in both GO and KEGG enrichment analyses. These results demonstrate that Weining chicken has moderate genetic diversity, low population differentiation, and evidence of inbreeding and gene flow, with candidate selection signals in immune and metabolic pathways (e.g., IL-17 and MAPK signaling), providing a quantitative basis for conservation and breeding programs.
结果表明,威宁鸡具有中等程度的遗传多样性,观察到的杂合度(Ho = 0.267)低于预期的杂合度(He = 0.312),近交系数(FIS≈0.14)为正,表明种群间存在一定程度的近交。菌株中HM的多样性最高,HT的多样性最低。群体结构分析、系统发育分析、主成分分析和混合分析均显示出较弱的遗传分化(FST < 0.06)和菌株间频繁的基因流动。亲属关系分析显示,大多数人的配对关系较低,少数人表现出更密切的亲属关系。选择签名扫描识别多个候选区域;这些区域内的基因在与免疫反应(如IL-17信号传导)和代谢调节(如MAPK信号传导)相关的生物过程和途径中显著富集,这在GO和KEGG富集分析中都得到了一致的强调。上述结果表明,威宁鸡遗传多样性中等,群体分化程度低,存在近亲繁殖和基因流动,在免疫和代谢途径(如IL-17和MAPK信号)中存在候选选择信号,为保护和育种提供了定量依据。
{"title":"Population genomic analysis of Weining chicken via dd-RAD sequencing: Unraveling diversity, structure, and selective sweeps","authors":"Zhaobi Ai ,&nbsp;Zhonglong Zhao ,&nbsp;Xiben Zhang ,&nbsp;Runqian Yang ,&nbsp;Yong Zhang ,&nbsp;Zelin Chen ,&nbsp;Weibo Li ,&nbsp;Yixing Ou ,&nbsp;Lanying Lei ,&nbsp;Hongying Ye","doi":"10.1016/j.psj.2026.106499","DOIUrl":"10.1016/j.psj.2026.106499","url":null,"abstract":"<div><div>To characterize the genetic diversity and evolutionary patterns of four Weining chicken strains from Guizhou Province, China, we generated genome-wide single nucleotide polymorphisms (SNPs) using dd-RAD sequencing. We found that Weining chicken exhibited moderate genetic diversity, with observed heterozygosity (Ho = 0.267) lower than expected heterozygosity (He = 0.312) and a positive inbreeding coefficient (FIS ≈ 0.14), indicating some degree of inbreeding across the population. Among strains, HM showed the highest diversity while HT had the lowest. Analyses of population structure, phylogeny, principal component analysis, and admixture consistently revealed weak genetic differentiation (FST &lt; 0.06) and frequent gene flow among strains. Kinship analysis demonstrated mostly low pairwise relatedness, with a minority of individuals exhibiting closer kinship. Selection signature scans identified multiple candidate regions; genes within these regions were significantly enriched for biological processes and pathways related to immune response (e.g., IL-17 signaling) and metabolic regulation (e.g., MAPK signaling), which were consistently highlighted in both GO and KEGG enrichment analyses. These results demonstrate that Weining chicken has moderate genetic diversity, low population differentiation, and evidence of inbreeding and gene flow, with candidate selection signals in immune and metabolic pathways (e.g., IL-17 and MAPK signaling), providing a quantitative basis for conservation and breeding programs.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106499"},"PeriodicalIF":4.2,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146080936","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ammonia mitigation and welfare enhancement in broilers using zeolite–clay–rice husk ash bedding supplement 沸石-粘土-稻壳灰垫料对肉仔鸡氨氮的缓解和福利的提高
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-20 DOI: 10.1016/j.psj.2026.106491
Nhi Thai Thao Nguyen , Kris Angkanaporn , Chackrit Nuengjamnong , Wantanee Buggakupta
Ammonia (NH₃) accumulation in broiler houses poses serious environmental and welfare challenges, causing respiratory irritation, impaired immunity, and footpad dermatitis. To address the limited long-term effectiveness of conventional materials like rice husk, this study evaluated a novel zeolite–clay–rice husk ash (ZCR) bedding formulation on broiler performance, welfare, litter quality, and in-house ammonia concentrations under commercial-like conditions. A total of 476, female Ross 308 broilers were randomly allocated to four treatments following a completely randomized design (seven replicate pens per treatment): control (5 cm thickness of rice husk, T1) or rice husk supplemented with ZCR bedding formulation at 10 % (T2), 20 % (T3), or 40 % (T4) of rice husk weight in T1 group. Birds were reared for 38 days in an evaporative-cooled house. Growth performance, including body weight, average daily gain, and feed conversion ratio, did not differ significantly among treatments (P > 0.05). In contrast, welfare indicators were significantly improved in birds reared on the 40 % ZCR bedding. Compared with the control, T4 birds exhibited lower heterophil-to-lymphocyte ratios, reduced serum cortisol concentrations (approximately 30 % reduction), and decreased footpad lesion severity (P < 0.05). T4 also maintained lower in-house NH₃ concentrations, reaching 50 % lower levels than the control at the end of the grow-out period. Litter collected at day 38 from ZCR-treated pens exhibited lower pH, reduced moisture content, and markedly lower NH₃ emissions. Correlation and orthogonal polynomial analyses further demonstrated dose–response relationships between graded ZCR inclusion, ammonia reduction, and welfare-related parameters. In conclusion, the novel ZCR bedding formulation effectively reduced NH3 emissions, reduced physiological stress and improved broiler welfare without compromising growth performance. These benefits are particularly relevant for tropical poultry production systems, where high humidity accelerates litter degradation and NH3 release.
氨(NH₃)在肉鸡房内的积累对环境和福利构成了严重的挑战,会引起呼吸刺激、免疫力下降和脚垫皮炎。为了解决传统材料(如稻壳)有限的长期有效性问题,本研究在类似商业条件下评估了一种新型沸石-粘土-稻壳灰(ZCR)床上配方对肉鸡生产性能、福利、产仔质量和室内氨浓度的影响。试验选用476只罗斯308雌性肉鸡,采用完全随机设计,随机分为4个处理(每个处理7个重复栏):T1组为对照(稻壳厚度为5 cm, T1), T1组稻壳中添加稻壳厚度为稻壳重量10% (T2)、20% (T3)、40% (T4)的ZCR垫层配方。这些鸟在蒸发冷却的房子里饲养了38天。生长性能,包括体重、平均日增重和饲料系数,各处理间差异不显著(P > 0.05)。相比之下,40% ZCR垫料饲养的鸟类福利指标显著提高。与对照组相比,T4鸟表现出更低的异细胞与淋巴细胞比率,血清皮质醇浓度降低(约30%),脚垫病变严重程度降低(P < 0.05)。T4也保持了较低的内部NH₃浓度,在生长结束时比对照组低50%。在第38天从zcr处理的围栏收集的垃圾显示出较低的pH值,降低的水分含量和显著降低的NH₃排放量。相关分析和正交多项式分析进一步证明了分级ZCR包合物、氨还原和福利相关参数之间的剂量-响应关系。综上所述,新型ZCR床上配方在不影响肉鸡生长性能的前提下,有效降低了NH3排放,降低了生理应激,提高了肉鸡福利。这些好处与热带家禽生产系统特别相关,在那里,高湿度加速了凋落物的降解和NH3的释放。
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引用次数: 0
Effects of drinking water temperature in summer on growth performance, water consumption, surface temperature, blood parameters, and intestinal development of geese from 14 to 42 days of age 夏季饮水温度对14 ~ 42日龄鹅生长性能、耗水量、体表温度、血液参数和肠道发育的影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-20 DOI: 10.1016/j.psj.2026.106490
X.F. Huang , H. Zhong , Y. Chen , Z.L. Liu , J.J. Xue , Q. Xie , Y. Luo , G.T. Dai , X. Han , C. Wang
This study aimed to investigate the effects of drinking water temperature on growth performance, water consumption, surface temperature, blood parameters, and intestinal development in geese, and to determine the optimal drinking water temperature for geese aged 14 to 42 days during summer. A total of 192 14-day-old male Yuzhou white geese were randomly allocated into four groups with eight replicate pens per group, corresponding to different drinking water temperatures: ambient temperature (TC, 28-37°C), 14°C (T1), 21°C (T2), and 37°C (T3). The results showed that decreasing the drinking water temperature significantly increased body weight (BW), average daily gain (ADG), and average daily feed intake (ADFI) (P < 0.05). Geese in groups T1 and T2 consumed more water per day compared to those in the TC and T3 groups (P < 0.05). Drinking both cold and hot water (T1 and T3) reduced surface temperatures around the eyes and underwings (P < 0.05). The provision of hot water significantly decreased blood levels of total protein (TP), globulin (GLO), insulin-like growth factor 1 (IGF-1), triiodothyronine (T3), and thyroxine (T4) (P < 0.05). Adjusting water temperature did not significantly promote intestinal development (P > 0.05). However, drinking hot water (T3) significantly reduced the activities of superoxide dismutase (SOD) and total antioxidant capacity (T-AOC) in the ileum (P < 0.05). Overall, these findings indicate that providing drinking water at 14°C and 21°C improves growth performance and water consumption, whereas water at 37°C may have certain adverse effects on geese. Under the conditions of this experiment, the optimal drinking water temperature for geese from 14 to 42 days of age is recommended to be 21°C.
本试验旨在研究饮水温度对鹅生长性能、耗水量、体表温度、血液参数和肠道发育的影响,确定14 ~ 42日龄鹅夏季适宜饮水温度。试验选用14日龄玉州白鹅192只,随机分为4组,每组8个重复栏,饮水温度分别为环境温度(TC, 28 ~ 37℃)、14℃(T1)、21℃(T2)和37℃(T3)。结果表明:降低饮水温度显著提高了仔猪体重、平均日增重和平均日采食量(P < 0.05)。T1和T2组鹅的日饮水量高于TC和T3组(P < 0.05)。同时饮用冷水和热水(T1和T3)可降低眼睛周围和翅膀下的表面温度(P < 0.05)。提供热水可显著降低血中总蛋白(TP)、球蛋白(GLO)、胰岛素样生长因子1 (IGF-1)、三碘甲状腺原氨酸(T3)和甲状腺素(T4)水平(P < 0.05)。调节水温对肠道发育无显著促进作用(P > 0.05)。而饮用热水显著降低回肠超氧化物歧化酶(SOD)活性和总抗氧化能力(T-AOC) (P < 0.05)。综上所述,提供14°C和21°C的饮用水可以提高鹅的生长性能和水分消耗,而37°C的饮用水可能对鹅有一定的不利影响。本试验条件下,14 ~ 42日龄鹅的适宜饮水温度为21℃。
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引用次数: 0
Nanoparticle delivery enhances the immunomodulatory efficacy of dietary methionine in broiler chickens 纳米颗粒可提高蛋氨酸对肉鸡的免疫调节作用
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-01-11 DOI: 10.1016/j.psj.2026.106436
Mehran Mehri , Mahmoud Ghazaghi , Morteza Asghari-Moghadam , Mohsen Amraie , Amir Karamzadeh-Dehaghani , Mohammad Rokouei
Methionine, an essential sulfur-containing amino acid, is fundamental for humoral immunity through its roles in immunoglobulin synthesis and as a precursor to the intracellular antioxidant glutathione. Enhancing the bioavailability of such key nutrients is a significant goal in nutritional immunology. This study investigated whether nanotechnology could enhance the immunomodulatory effects of methionine by comparing the efficacy and relative bioavailability (RBV) of conventional DL-methionine (DL-Met) with a novel nanoparticle-conjugated methionine (nano-Met) in an avian model. The humoral immune response was quantified by measuring primary and secondary antibody titers following challenge with a T-cell-dependent antigen (sheep red blood cells). Exponential regression modeling revealed that the relative bioavailability of nano-Met was 279% (95% CI: 80–479%) compared to DL-Met. Furthermore, dose-response analysis confirmed that a lower concentration of nano-Met was required to achieve a maximal antibody response, indicating superior biological efficiency. These findings demonstrate that nanoparticle-based delivery systems can dramatically increase the bioavailability and immunomodulatory efficacy of essential amino acids. This approach could have significant implications for human health, particularly in clinical contexts requiring enhanced immune function or in populations with compromised nutrient absorption, offering a novel paradigm for targeted nutritional intervention.
蛋氨酸是一种必需的含硫氨基酸,通过其在免疫球蛋白合成中的作用和作为细胞内抗氧化剂谷胱甘肽的前体,对体液免疫至关重要。提高这些关键营养素的生物利用度是营养免疫学的一个重要目标。本研究通过比较传统蛋氨酸(DL-methionine, DL-Met)和新型纳米粒子共轭蛋氨酸(nanoparticle-conjugated methionine, nano-Met)在禽类模型中的功效和相对生物利用度(relative bioavailability, RBV),探讨纳米技术是否可以增强蛋氨酸的免疫调节作用。体液免疫反应是通过测量t细胞依赖性抗原(羊红细胞)攻击后的一抗和二抗滴度来量化的。指数回归模型显示,纳米met相对于DL-Met的生物利用度为279% (95% CI: 80-479%)。此外,剂量-反应分析证实,较低浓度的纳米met就能达到最大的抗体反应,这表明了优越的生物效率。这些发现表明,基于纳米颗粒的递送系统可以显著提高必需氨基酸的生物利用度和免疫调节功效。这种方法可能对人类健康产生重大影响,特别是在需要增强免疫功能的临床背景下或在营养吸收受损的人群中,为有针对性的营养干预提供了一种新的范例。
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引用次数: 0
Anthelmintic effects of Artemisia herba-alba and Artemisia judaica extracts on Ascaridia galli in poultry 白蒿和青蒿提取物对家禽鸡蛔虫的驱虫作用
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-04-01 Epub Date: 2026-02-05 DOI: 10.1016/j.psj.2026.106594
Anas Abdelqader , Zeinab Mahasneh , Samah Albataineh , Lana Abdelhafiz
Assessment of antiparasitic efficacy of Artemisia herba-alba and Artemisia judaica using in vitro, in silico, and animal-based models against Ascaridia galli was conducted. Ethanolic extracts from each Artemisia species were separately prepared in 0.5% DMSO. For the in vitro analysis, a total of 180 adult Ascaridia galli worms were harvested from naturally infected chicks and randomly assigned into four equal groups. Group 1 received Fenbendazole (0.5 mg/mL), Group 2 was treated with A. herba-alba extract (50 mg/mL), Group 3 with A. Judaica extract (50 mg/mL), and Group 4 served as the control, exposed to 0.5% DMSO. All treatments were applied for a duration of 13 hours. For the in vivo investigation, 540 A. galli-infected chicks were divided into six equally sized groups. Groups 1 and 2 received A. herba-alba at 1000 and 3000 mg/kg body weight, respectively. Similarly, Groups 3 and 4 were treated with A. Judaica at 1000 and 3000 mg/kg. Group 5 was administered Fenbendazole (50 mg/kg) as a positive control, while Group 6 served as the untreated control. Both A. herba-alba and A. Judaica significantly inhibited worm motility in vitro compared to the control group. Fenbendazole achieved 100% inhibition (P < 0.001), while A. herba-alba showed 30.1% inhibition (P < 0.05), and A. Judaica demonstrated 23.1% inhibition (P < 0.05). At 14 days post-treatment, Artemisia-treated groups showed a significant decrease in female fecundity, fecal egg count (FEC), and worm burden relative to the control group. Notably, there was no significant variation (P > 0.05) based on the Artemisia species or dose level used. In vitro exposure of nematodes to A. judaica and A. herba-alba extracts resulted in a significant, time-dependent reduction in worm motility compared with control treatments, whereas fenbendazole induced rapid and complete immobilization; no significant differences were observed between the two herbal extracts. Molecular docking analysis indicates that camphor demonstrated robust affinity score of -6.25 kcal/mol against ATP synthase, while camphor against glutathione transferase showed promising interactions with an affinity score of -6.90 kcal/mol. In conclusion, extracts of A. herba-alba and A. Judaica demonstrate significant potential as effective and suitable alternatives for managing A. galli infections in poultry by targeting ATP synthase and glutathione transferase in A. galli.
采用体外模型、计算机模型和动物模型评价了白蒿和犹太蒿对鸡蛔虫的抗寄生效果。在0.5% DMSO中分别制备各蒿属植物的乙醇提取物。为了进行体外分析,从自然感染的雏鸡身上采集了180只成虫,随机分为四组。1组给予芬苯达唑(0.5 mg/mL), 2组给予白刺提取物(50 mg/mL), 3组给予犹太刺提取物(50 mg/mL), 4组作为对照,0.5% DMSO。所有治疗均持续13小时。在体内研究中,540只感染了大肠杆菌的雏鸡被分成6个大小相等的组。1组和2组分别给予1000和3000 mg/kg体重的白刺提取物。同样,第3组和第4组给药剂量分别为1000和3000 mg/kg。第5组给予芬苯达唑(50 mg/kg)作为阳性对照,第6组为未处理对照组。与对照组相比,白麻和犹太麻均能显著抑制线虫的体外运动。芬苯达唑的抑制率为100% (P < 0.001),白麻的抑制率为30.1% (P < 0.05),犹太麻的抑制率为23.1% (P < 0.05)。处理后14 d,与对照组相比,蒿处理组雌鼠繁殖力、粪卵数(FEC)和虫负荷显著降低。值得注意的是,不同的青蒿种类或剂量水平没有显著差异(P > 0.05)。与对照处理相比,体外暴露于麻草和白草提取物的线虫的运动能力显著降低,且时间依赖性较强,而芬苯达唑则诱导线虫快速完全静止;两种草药提取物之间无显著差异。分子对接分析表明,樟脑对ATP合酶的亲和力评分为-6.25 kcal/mol,对谷胱甘肽转移酶的亲和力评分为-6.90 kcal/mol,具有良好的相互作用。综上所述,白草和犹太草提取物具有显著的潜力,可作为控制家禽鸡链球菌感染的有效和合适的替代品,其作用靶点是鸡链球菌的ATP合酶和谷胱甘肽转移酶。
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引用次数: 0
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Poultry Science
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