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Application of culturomics to explore the cultivable microbiota and enable targeted bacterial isolation from the ceca of broiler chickens 应用培养组学技术探索肉鸡盲肠可培养菌群,实现对盲肠细菌的靶向分离
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106527
Manhong Wang , Xin Ye , Chuan-Yu Hsu , Hailey Fugate , Xue Zhang , Pratima Acharya Adhikari , Peixin Fan , Katie Elliott , Ken Macklin , Li Zhang
Metagenomic analyses have significantly advanced our understanding of microbial composition in the poultry gut. However, many microbes identified through metagenomic studies remain uncultured, largely due to the lack of understanding of their cultivation conditions, which hinders efforts to explore their functional roles in gut health and metabolism. In this study, we performed culturomics, a culture-dependent approach that combines diverse culture conditions with high-throughput 16S rRNA gene sequencing, to comprehensively assess the cultivability of chicken cecal microbiota and provide guidance for isolating target species of interest. Microbial profiling was performed using both culture-dependent (CD) and culture-independent (CI) approaches. For CI, genomic DNA (gDNA) was directly extracted from six broiler chicken cecal samples and subjected to full-length 16S rRNA gene sequencing. For CD, the same samples were cultured under 28 conditions, yielding 161 colony mixtures for sequencing. Based on diversity profiles of the colony mixtures, 10 conditions were selected for single-colony isolation and analysis. Results showed that CD and CI approaches identified 350 and 502 bacterial species, respectively, with 160 species detected by both methods. The dominant species recovered by the CD approach,including Escherichia coli, Proteus mirabilis, Limosilactobacillus reuteri, Enterococcus faecalis, and Ligilactobacillus salivarius, were detected at much lower abundances in the CI analysis, highlighting the capacity of culturomics to enrich and recover minority taxa that are often poorly detected by CI apparoach. Cultivation profiling showed that MRS selectively enriched Limosilactobacillus and Ligilactobacillus as well as Lactobacillus, whereas CNAB and MSA enriched Enterococcus and Bacillus, respectively. Community diversity and structure were significantly influenced by culture conditions (P < 0.01), with medium as the primary factor and air condition as a secondary factor. Subsequent single-colony analysis from 10 selected culture conditions identified 150 single-species isolates belonging to 14 distinct bacterial species. This study provides foundational insight into the cultivability of chicken cecal microbiota, facilitating future research to isolate specific strains and characterize their roles in poultry health and nutrition.
宏基因组分析大大提高了我们对家禽肠道微生物组成的理解。然而,许多通过宏基因组学研究鉴定的微生物仍然未被培养,这主要是由于缺乏对其培养条件的了解,这阻碍了探索其在肠道健康和代谢中的功能作用。在本研究中,我们采用了培养组学,一种将不同培养条件与高通量16S rRNA基因测序相结合的培养依赖方法,全面评估鸡盲肠微生物群的可培养性,并为分离感兴趣的目标物种提供指导。使用培养依赖性(CD)和培养非依赖性(CI)方法进行微生物谱分析。CI方法是直接从6只肉鸡盲肠样本中提取基因组DNA (gDNA),并进行16S rRNA全长基因测序。对于CD,同样的样品在28种条件下培养,得到161个菌落混合物用于测序。根据菌落混合物的多样性特征,选择10个条件进行单菌落分离和分析。结果表明,CD法和CI法分别鉴定出350种和502种细菌,两种方法共鉴定出160种细菌。通过CD方法恢复的优势物种,包括大肠杆菌、奇异变形杆菌、罗伊氏乳酸杆菌、粪肠球菌和唾液脂乳杆菌,在CI分析中被检测到的丰度要低得多,这突出了培养组学丰富和恢复少数类群的能力,而这些类群通常在CI方法中检测不到。培养分析表明,MRS选择性富集Limosilactobacillus和liilactobacillus以及Lactobacillus,而CNAB和MSA分别富集Enterococcus和Bacillus。培养条件对群落多样性和结构有显著影响(P < 0.01),培养基是主要因素,空气条件是次要因素。随后从10个选定的培养条件中进行单菌落分析,鉴定出150个单菌种分离物,属于14种不同的细菌。本研究为深入了解鸡盲肠菌群的可培养性提供了基础,为进一步研究分离特定菌株和表征其在家禽健康和营养中的作用提供了基础。
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引用次数: 0
miRNA profiling reveals that gga-let-7i/COL1A2 axis induces cell cycle arrest and triggers cellular senescence to accelerate ovarian aging in laying hens by suppressing the PI3K/AKT/MDM2 pathway miRNA分析表明,gga-let-7i/COL1A2轴通过抑制PI3K/AKT/MDM2通路诱导细胞周期阻滞,触发细胞衰老,从而加速蛋鸡卵巢衰老。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106542
Yuanhang Wei , Chimei Liao , Yixuan Wang , Can Cui , Yao Zhang , Zhuanjian Li , Congjiao Sun , Qing Zhu , Huadong Yin , Shunshun Han
Reproductive senescence in laying hens, characterized by a progressive decline in egg production, represents a major challenge for the poultry industry. Although microRNAs (miRNAs) are recognized as important regulators of aging, their specific roles and mechanisms in ovarian aging of hens remain largely unclear. This study was designed to comprehensively analyze miRNA expression patterns during ovarian aging in laying hens. The objectives of this study were to identify key functional miRNAs and to elucidate their molecular regulatory mechanisms. Specifically, this study evaluated ovarian senescence in hens at 350, 500 and 700 days of age, observing a decline in egg production, increased follicular atresia, and p53 upregulation. miRNA sequencing analysis identified 44 differentially expressed miRNAs (DEMs), among which gga-let-7i exhibited the highest abundance and showed progressive upregulation during aging. Functional assays revealed that gga-let-7i induces cell cycle arrest and promotes cellular senescence in ovarian follicle granulosa cells (GCs). Mechanistically, collagen type I alpha 2 chain (COL1A2) was confirmed as a direct target of gga-let-7i, and it has been demonstrated that gga-let-7i accelerates senescence by inhibiting the COL1A2/PI3K/AKT/MDM2 pathway, resulting in p53 accumulation and the downstream cellular senescence signaling pathways activation. These results uncover a novel gga-let-7i/COL1A2 regulatory axis involved in ovarian aging and suggest potential targets for extending reproductive longevity in laying hens.
蛋鸡的生殖衰老,其特点是产蛋量逐渐下降,是家禽业面临的主要挑战。尽管microRNAs (miRNAs)被认为是衰老的重要调节因子,但它们在母鸡卵巢衰老中的具体作用和机制仍不清楚。本研究旨在全面分析蛋鸡卵巢衰老过程中miRNA的表达模式。本研究的目的是鉴定关键功能mirna并阐明其分子调控机制。具体来说,本研究评估了母鸡在350、500和700日龄时的卵巢衰老,观察到产蛋量下降、卵泡闭锁增加和p53上调。miRNA测序分析鉴定出44个差异表达miRNA (DEMs),其中gga-let-7i丰度最高,并在衰老过程中逐渐上调。功能分析显示,gga-let-7i诱导卵泡颗粒细胞(GCs)细胞周期阻滞,促进细胞衰老。机制上,ⅰ型胶原α 2链(COL1A2)被证实是gga-let-7i的直接靶点,gga-let-7i通过抑制COL1A2/PI3K/AKT/MDM2通路加速衰老,导致p53积累,激活下游细胞衰老信号通路。这些结果揭示了一个新的gga-let-7i/COL1A2调节轴参与卵巢衰老,并提出了延长蛋鸡生殖寿命的潜在靶点。
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引用次数: 0
Research note: Identification of SNP-based haplotypes for the A, D, E, I, and L alloantigen systems in the chicken reference genome line UCD-001 研究说明:鸡参考基因组系UCD-001中A、D、E、I和L异体抗原系统的单倍型鉴定
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106545
Robert L. Taylor Jr. , Amy M. McCarron , Janet E. Fulton
Allelic variation in chicken red blood cell alloantigens has multiple associations with production traits or disease resistance. Recent studies have identified the gene and chromosomal location for chicken alloantigen genes A, D, E, I, and L. Haplotypes (specific SNP combinations) within each gene were identified to distinguish the serological variants found within the different blood systems. The objective of this study was to characterize alloantigen alleles in Line UCD-001, an inbred line of Jungle fowl, which is the original reference sequence for the chicken genome. The B blood group, the chicken MHC, was the only alloantigen system having known serological and SNP types, with UCD-001 typing as serological BQ and DNA-based BSNP-A09A. Genome sequence and DNA samples from the original UCD-001 reference bird, plus an additional 10 UCD-001 birds, were used to identify five additional alloantigen system alleles within UCD-001. The alloantigen genes and their SNP types for the A and the linked E systems are complement component 4 binding protein, membrane, C4BPM-H12, and Fc fragment of IgA and IgM receptor, FCAMR-H01, respectively. Neither of these SNP types corresponded to alleles previously characterized by serology. Alloantigen D was identified as CD99 whose SNP haplotype, CD99-H06, corresponded to the D3 serological allele. The I system, equivalent to the human RHCE blood group locus, was heterozygous in the reference population. Both RHCE-H01, the I8 serological allele, and RHCE-H06, previously unidentified by serology, were present in UCD-001. The ABCE1 gene, ATP-binding cassette subfamily E member 1, is alloantigen L with UCD-001 containing the ABCE1-H01 haplotype consistent with the L1 serological allele. Identifying the alloantigen genotypes of this important inbred line will facilitate studies of alloantigen effects through line crosses to produce progeny segregating for alloantigen alleles or through comparisons with other stocks.
鸡红细胞同种异体抗原的等位基因变异与生产性状或抗病性有多重关联。最近的研究已经确定了鸡异体抗原基因A、D、E、I和l的基因和染色体位置,确定了每个基因中的单倍型(特定SNP组合),以区分在不同血液系统中发现的血清学变异。本研究的目的是对作为鸡基因组原始参考序列的丛林鸡自交系UCD-001的同种异体抗原等位基因进行鉴定。B血型,即鸡MHC,是唯一已知血清学和SNP分型的同种异体抗原系统,其中UCD-001分型为血清学BQ和基于dna的BSNP-A09A。利用原始UCD-001参考鸟和另外10只UCD-001参考鸟的基因组序列和DNA样本,确定了UCD-001中另外5个同种异体抗原系统等位基因。A和连接的E系统的同种异体抗原基因及其SNP类型分别为IgA和IgM受体的补体组分4结合蛋白、膜、c4bmp - h12和Fc片段FCAMR-H01。这些SNP类型都不对应于先前血清学表征的等位基因。同种异体抗原D鉴定为CD99,其SNP单倍型CD99- h06与D3血清学等位基因对应。I系统相当于人类RHCE血型位点,在参考人群中是杂合的。RHCE-H01、I8血清学等位基因和RHCE-H06均存在于UCD-001中,此前未被血清学鉴定。ABCE1基因,atp结合盒亚家族E成员1,是UCD-001的同种异体抗原L,含有与L1血清学等位基因一致的ABCE1- h01单倍型。确定这一重要自交系的同种异体抗原基因型,将有助于通过杂交产生同种异体抗原等位基因的后代分离或通过与其他种群的比较来研究同种异体抗原的作用。
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引用次数: 0
Development of monoclonal antibodies for GoAstV-2 VP27 protein and precise mapping of linear antigenic epitopes GoAstV-2 VP27蛋白单克隆抗体的制备及线性抗原表位的精确定位
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106535
Kaiyue Qin , Lingdan Yin , Huanrong Zhang
Since 2016, a novel astrovirus identified as goose astrovirus (GoAstV), is classified into genotypes 1 and 2 (GoAstV-1 and GoAstV-2). GoAstV-2 has caused a severe outbreak of visceral gout in goslings characterized by extensive visceral urate deposition and kidney swelling, resulting in substantial financial losses to the goose farming industry in China. The GoAstV-2 VP27 protein encoded by ORF2 contains neutralizing antigenic epitopes, thus representing a key candidate for the development of diagnostic reagents and epitope vaccines. This study aimed to prepare the monoclonal antibody (mAb) against GoAstV-2 VP27 and identify its epitope. The GoAstV-2 VP27 protein was expressed and purified using a prokaryotic expression system, followed by immunization of BALB/c mice. We employed hybridoma technology to generate a stable monoclonal antibody-secreting cell line targeting GoAstV-2 VP27, which was named 11-39B and characterized as IgG2b with kappa light chain. Furthermore, the mAb 11-39B specifically bound to GoAstV-2 as confirmed by Western blotting (WB), immunofluorescence assay (IFA) and immunohistochemistry (IHC), and potently neutralized GoAstV-2 infection in vivo in a dose-dependent manner. For epitope mapping, sequential truncations of the GoAstV-2 VP27 protein were constructed by eukaryotic expression and tested by WB. The results indicated that peptide 661SLKTS665 was the minimal epitope recognized by mAb 11-39B. Homology and structural analyses demonstrated that the epitope was situated on the surface of the VP27 protein and exhibited high conservation among GoAstV-2 strains but exhibited significant differences in the GoAstV-1 serotype. Our study contributes to a better understanding of the GoAstV-2 VP27 antigenic region and provides a basis for establishing epitope-based GoAstV-2 diagnostic methods and vaccine development.
自2016年以来,一种被鉴定为鹅星状病毒(GoAstV)的新型星状病毒被划分为基因型1和2 (GoAstV-1和GoAstV-2)。GoAstV-2在雏鹅中引起了严重的内脏痛风暴发,其特征是广泛的内脏尿酸沉积和肾脏肿胀,给中国的鹅养殖业造成了巨大的经济损失。ORF2编码的GoAstV-2 VP27蛋白含有中和性抗原表位,因此是开发诊断试剂和表位疫苗的关键候选蛋白。本研究旨在制备抗GoAstV-2 VP27的单克隆抗体(mAb)并鉴定其表位。利用原核表达系统对GoAstV-2 VP27蛋白进行了表达纯化,并对BALB/c小鼠进行了免疫。我们采用杂交瘤技术制备了一株稳定的靶向GoAstV-2 VP27的单克隆抗体分泌细胞系,命名为11-39B,特征为带kappa轻链的IgG2b。此外,经Western blotting (WB)、免疫荧光试验(IFA)和免疫组织化学(IHC)证实,mAb 11-39B特异性结合GoAstV-2,并以剂量依赖的方式在体内有效中和GoAstV-2感染。为了定位表位,我们通过真核表达构建了GoAstV-2 VP27蛋白的序列截断,并进行了WB检测。结果表明,肽661SLKTS665是mAb 11-39B识别的最小表位。同源性和结构分析表明,该表位位于VP27蛋白的表面,在GoAstV-2株中具有较高的保守性,但在GoAstV-1血清型中存在显著差异。我们的研究有助于更好地了解GoAstV-2 VP27抗原区,为建立基于表位的GoAstV-2诊断方法和疫苗开发提供基础。
{"title":"Development of monoclonal antibodies for GoAstV-2 VP27 protein and precise mapping of linear antigenic epitopes","authors":"Kaiyue Qin ,&nbsp;Lingdan Yin ,&nbsp;Huanrong Zhang","doi":"10.1016/j.psj.2026.106535","DOIUrl":"10.1016/j.psj.2026.106535","url":null,"abstract":"<div><div>Since 2016, a novel astrovirus identified as goose astrovirus (GoAstV), is classified into genotypes 1 and 2 (GoAstV-1 and GoAstV-2). GoAstV-2 has caused a severe outbreak of visceral gout in goslings characterized by extensive visceral urate deposition and kidney swelling, resulting in substantial financial losses to the goose farming industry in China. The GoAstV-2 VP27 protein encoded by ORF2 contains neutralizing antigenic epitopes, thus representing a key candidate for the development of diagnostic reagents and epitope vaccines. This study aimed to prepare the monoclonal antibody (mAb) against GoAstV-2 VP27 and identify its epitope. The GoAstV-2 VP27 protein was expressed and purified using a prokaryotic expression system, followed by immunization of BALB/c mice. We employed hybridoma technology to generate a stable monoclonal antibody-secreting cell line targeting GoAstV-2 VP27, which was named 11-39B and characterized as IgG2b with kappa light chain. Furthermore, the mAb 11-39B specifically bound to GoAstV-2 as confirmed by Western blotting (WB), immunofluorescence assay (IFA) and immunohistochemistry (IHC), and potently neutralized GoAstV-2 infection <em>in vivo</em> in a dose-dependent manner. For epitope mapping, sequential truncations of the GoAstV-2 VP27 protein were constructed by eukaryotic expression and tested by WB. The results indicated that peptide <sup>661</sup>SLKTS<sup>665</sup> was the minimal epitope recognized by mAb 11-39B. Homology and structural analyses demonstrated that the epitope was situated on the surface of the VP27 protein and exhibited high conservation among GoAstV-2 strains but exhibited significant differences in the GoAstV-1 serotype. Our study contributes to a better understanding of the GoAstV-2 VP27 antigenic region and provides a basis for establishing epitope-based GoAstV-2 diagnostic methods and vaccine development.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106535"},"PeriodicalIF":4.2,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146080938","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Duck β-defensin 10 inhibits Salmonella enterica by disrupting bacterial membrane integrity and its association with gut microbiota dynamics. 鸭β-防御素10通过破坏细菌膜完整性及其与肠道微生物群动力学的关系来抑制肠沙门氏菌。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106526
Hongbo Zeng, Junjie Zhang, Fei Wang, Yang Wen, Jie Cai, Yingping Xiao, Bindan Chen, Hua Yang, Wentao Lyu

Salmonella infections pose a significant threat to waterfowl. Avian β-defensin 10 (AvBD10), a key molecule of host innate immunity, exhibits broad-spectrum antibacterial activity and immune regulatory function. However, research on the tissue-specific expression and antibacterial activity against Salmonella of AvBD10 in waterfowl remains limited. In this study, we first revealed the expression characteristics of AvBD10 in the tissues of ducks at different ages using in vivo experiments. Subsequently, we elucidated the interaction between AvBD10 and intestinal microorganisms, such as Salmonella, by combining 16S rDNA sequencing analysis of the microbiota in the cecum. Finally, we verified the antibacterial effect of AvBD10 on Salmonella using in vitro experiments. The results revealed that the expression of AvBD10 displayed notable (P<0.05) tissue-specific patterns, exhibiting variations associated with the developmental stage in ducks. In particular, AvBD10 was prominently expressed in the cecum during the initial brooding phase, with consistent modulation observed throughout maturation. In addition, AvBD10 expression shows a significant negative correlation (R=-0.460; 95% confidence intervals: -0.632 to -0.248; P<0.05) with the relative abundance of Salmonella in the cecum. Furthermore, AvBD10 exhibited a minimum inhibitory concentration of 62.5 μg/mL against Salmonella enterica and exerted its antibacterial properties by electrostatically binding to the Salmonella cell membrane via positively charged amino acid residues, leading to disruption of the membrane structure. This study provides a significant theoretical foundation for the green and healthy breeding of livestock and poultry.

沙门氏菌感染对水禽构成重大威胁。禽β-防御素10 (AvBD10)是宿主先天免疫的关键分子,具有广谱抗菌活性和免疫调节功能。然而,对AvBD10在水禽中的组织特异性表达及对沙门氏菌的抑菌活性的研究仍然有限。在本研究中,我们首先通过体内实验揭示了AvBD10在不同年龄鸭子组织中的表达特征。随后,我们结合盲肠微生物群的16S rDNA测序分析,阐明了AvBD10与肠道微生物(如沙门氏菌)的相互作用。最后,通过体外实验验证了AvBD10对沙门氏菌的抑菌作用。结果显示,AvBD10的表达显著(P
{"title":"Duck β-defensin 10 inhibits Salmonella enterica by disrupting bacterial membrane integrity and its association with gut microbiota dynamics.","authors":"Hongbo Zeng, Junjie Zhang, Fei Wang, Yang Wen, Jie Cai, Yingping Xiao, Bindan Chen, Hua Yang, Wentao Lyu","doi":"10.1016/j.psj.2026.106526","DOIUrl":"10.1016/j.psj.2026.106526","url":null,"abstract":"<p><p>Salmonella infections pose a significant threat to waterfowl. Avian β-defensin 10 (AvBD10), a key molecule of host innate immunity, exhibits broad-spectrum antibacterial activity and immune regulatory function. However, research on the tissue-specific expression and antibacterial activity against Salmonella of AvBD10 in waterfowl remains limited. In this study, we first revealed the expression characteristics of AvBD10 in the tissues of ducks at different ages using in vivo experiments. Subsequently, we elucidated the interaction between AvBD10 and intestinal microorganisms, such as Salmonella, by combining 16S rDNA sequencing analysis of the microbiota in the cecum. Finally, we verified the antibacterial effect of AvBD10 on Salmonella using in vitro experiments. The results revealed that the expression of AvBD10 displayed notable (P<0.05) tissue-specific patterns, exhibiting variations associated with the developmental stage in ducks. In particular, AvBD10 was prominently expressed in the cecum during the initial brooding phase, with consistent modulation observed throughout maturation. In addition, AvBD10 expression shows a significant negative correlation (R=-0.460; 95% confidence intervals: -0.632 to -0.248; P<0.05) with the relative abundance of Salmonella in the cecum. Furthermore, AvBD10 exhibited a minimum inhibitory concentration of 62.5 μg/mL against Salmonella enterica and exerted its antibacterial properties by electrostatically binding to the Salmonella cell membrane via positively charged amino acid residues, leading to disruption of the membrane structure. This study provides a significant theoretical foundation for the green and healthy breeding of livestock and poultry.</p>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"106526"},"PeriodicalIF":4.2,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12882717/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Independent and interactive effects of limestone solubility, dietary calcium content and phytase dose on growth performance, mineral digestibility and utilization in broilers 石灰石溶解度、饲粮钙含量和植酸酶剂量对肉鸡生长性能、矿物质消化率和利用的独立和交互影响
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106532
A. Bello , C. Kwakernaak , R. Davin , R.R. Santos , L. Marchal , Y. Dersjant-Li
Effects of limestone solubility, dietary Ca concentration and dose of a 6-phytase (PhyG) on broiler growth performance, mineral digestibility and utilization were investigated. A randomized complete block design (2 × 3 × 2 arrangement; 12 treatments) incorporated 2 limestones [high solubility (HSL), and low solubility limestone (LSL), 94 and 58 % soluble, respectively, after 5 min at pH 3; geometric mean diameter 57 and 400 μm, respectively], 3 Ca levels: Low, Medium, High (0.65, 0.80, 0.95 % during 0 to 10 d of age; 0.55, 0.70, 0.85 % during 11 to 20 d of age; 0.45, 0.60, 0.75 % during 21 to 35 d of age), and two phytase doses [500 and 1,500 phytase units (FTU)/kg]. Diets were formulated with retainable P using a phytase matrix and fed as pelleted corn-, wheat- and soybean meal-based diets ad libitum to Ross 308 males (2,160 birds, 6 pens/treatment, 30 birds/pen). Digesta was collected on d 20 d to determine ileal digestibility (AID) of minerals. Tibias were collected on d 10, 20 and 35 for bone ash determination. There were 2-way interactions between limestone solubility and Ca level, limestone solubility and phytase dose and Ca level and phytase dose on final BW, overall BW gain and feed intake; all were reduced (P < 0.05) by increasing dietary Ca, with HSL vs. LSL, and increased with high vs. low phytase. Tibia ash was increased by high (vs. low) phytase dose across diets. The AID of P at d 20 was increased by LSL vs. HSL, reduced by increasing dietary Ca, and increased by high (vs. low) phytase dose; AID of Ca was reduced by LSL vs. HSL. The highest d 35 BW (2,571 g) was achieved with LSL, Medium Ca and 1,500 FTU/kg PhyG. Achieving optimal growth performance depended upon the combined effects of all 3 factors; in diets containing HSL and High Ca, increasing the phytase dose may maintain performance and reduce the negative effects of excess Ca.
研究石灰石溶解度、饲粮钙浓度和6-植酸酶(PhyG)用量对肉鸡生长性能、矿物质消化率和利用的影响。随机完全区组设计(2 × 3 × 2排列,12个处理)采用2种石灰石[高溶解度石灰石(HSL)和低溶解度石灰石(LSL),在pH 3下5 min后,溶解度分别为94%和58%;3种钙水平:低、中、高(0 ~ 10 d时为0.65、0.80、0.95%;11 ~ 20 d时为0.55、0.70、0.85%;21 ~ 35 d时为0.45、0.60、0.75%),两种植酸酶剂量[500和1500 FTU /kg]。采用植酸酶基质配制可获得磷饲料,以玉米、小麦和豆粕为基础,饲喂罗斯308只雄性(2160只,每处理6个栏,每栏30只)。在第20天采集食糜,测定矿物质的回肠消化率。于第10、20、35天采集胫骨进行骨灰测定。石灰石溶解度与钙水平、石灰石溶解度与植酸酶剂量、钙水平与植酸酶剂量对最终体重、总体重增重和采食量有双向交互作用;随着饲粮钙含量的增加,HSL与LSL均降低(P < 0.05),随着植酸酶含量的增加而升高(P < 0.05)。植酸酶高剂量(相对于低剂量)增加了胫骨灰分。在第20天,低剂量植酸酶比高剂量植酸酶提高了P的AID,增加饲粮钙降低了P的AID,高剂量植酸酶提高了P的AID;与HSL相比,LSL降低了Ca的AID。在LSL、中等钙和1500 FTU/kg PhyG条件下,最高可达35bw (2571 g)。实现最优生长绩效取决于3个因素的综合作用;在高钙和高盐饲粮中,增加植酸酶剂量可以维持生产性能,减少过量钙的负面影响。
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引用次数: 0
Antimicrobial resistance and genomic characteristics of avian Pasteurella multocida 禽多杀性巴氏杆菌的耐药性及基因组特征。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106524
Fengcheng Miao , Bing Dai , Zhiyu Li , Kaikai Lv , Junxing Li , Shuangmao Li , Shuaijie Song , Huafeng Jian , Xiaoqian Long , Yao Shen , Yinghui Wei , Hua Yang , Jiangang Ma

Background

Pasteurella multocida, the cause of fowl cholera, poses a significant economic threat to poultry. The escalation of antimicrobial resistance (AMR) in this pathogen, driven by drug misuse, is a serious concern. Crucially, a comprehensive understanding of AMR patterns, molecular epidemiology, and virulence in Chinese avian strains is still lacking. This study aimed to elucidate the phenotypic and genomic characteristics of P. multocida strains isolated from avian in Zhejiang Province, China.

Result

Twenty avian-origin P. multocida strains isolated in Zhejiang Province were subjected to antimicrobial susceptibility testing, whole-genome sequencing, and virulence assessment. Resistance was most frequent to florfenicol (65%) and tetracycline (50%). Multi-Locus Sequence Typing analysis revealed that ST471 and its closely related variant ST129 collectively constituted the dominant clonal group. A total of 13 resistance genes belonging to 5 major classes were identified, with floR (75%), sul2 (50%), and tet (B) (50%) exhibiting the highest prevalence. In the Galleria mellonella model challenged with 1.5 × 10⁷ CFU/larva, ST471 strains exhibited a slower killing rate compared to ST129 strains, while the ST7 strain demonstrated low virulence.

Conclusion

This study demonstrates the increasing prevalence of avian P. multocida in China, specifically the sustained circulation of ST129 and the recent emergence of ST471, particularly in ducks. These findings underscore the urgency of continuous monitoring of strain dissemination and the evolution of multidrug resistance, providing a scientific basis for precise and rational antimicrobials use in farms and for blocking the spread of potentially high-risk strains.
背景:多杀性巴氏杆菌是禽类霍乱的病因,对家禽造成重大的经济威胁。在药物滥用的驱动下,这种病原体的抗菌素耐药性(AMR)的升级是一个严重的问题。至关重要的是,对中国禽流感菌株的AMR模式、分子流行病学和毒力的全面了解仍然缺乏。本研究旨在阐明浙江省禽源多杀假单胞菌的表型和基因组特征。结果:对浙江省分离的20株禽源多杀假单胞菌进行了药敏试验、全基因组测序和毒力评价。耐药最常见的是氟苯尼考(65%)和四环素(50%)。多位点序列分型分析表明,ST471及其近缘变异ST129共同构成优势克隆群。共鉴定出5大类13个耐药基因,其中以floR(75%)、sul2(50%)和tet (B)(50%)患病率最高。在1.5 × 10⁷CFU/幼虫攻毒的mellonella Galleria模型中,与ST129菌株相比,ST471菌株表现出较慢的杀伤率,而ST7菌株表现出较低的毒力。结论:本研究表明中国禽类多杀假单胞菌的流行正在增加,特别是ST129的持续流行和ST471的最近出现,特别是在鸭子中。这些发现强调了持续监测菌株传播和多药耐药性演变的紧迫性,为在农场精确合理地使用抗菌素和阻止潜在高风险菌株的传播提供了科学依据。
{"title":"Antimicrobial resistance and genomic characteristics of avian Pasteurella multocida","authors":"Fengcheng Miao ,&nbsp;Bing Dai ,&nbsp;Zhiyu Li ,&nbsp;Kaikai Lv ,&nbsp;Junxing Li ,&nbsp;Shuangmao Li ,&nbsp;Shuaijie Song ,&nbsp;Huafeng Jian ,&nbsp;Xiaoqian Long ,&nbsp;Yao Shen ,&nbsp;Yinghui Wei ,&nbsp;Hua Yang ,&nbsp;Jiangang Ma","doi":"10.1016/j.psj.2026.106524","DOIUrl":"10.1016/j.psj.2026.106524","url":null,"abstract":"<div><h3>Background</h3><div><em>Pasteurella multocida</em>, the cause of fowl cholera, poses a significant economic threat to poultry. The escalation of antimicrobial resistance (AMR) in this pathogen, driven by drug misuse, is a serious concern. Crucially, a comprehensive understanding of AMR patterns, molecular epidemiology, and virulence in Chinese avian strains is still lacking<em>.</em> This study aimed to elucidate the phenotypic and genomic characteristics of <em>P. multocida</em> strains isolated from avian in Zhejiang Province, China.</div></div><div><h3>Result</h3><div>Twenty avian-origin <em>P. multocida</em> strains isolated in Zhejiang Province were subjected to antimicrobial susceptibility testing, whole-genome sequencing, and virulence assessment. Resistance was most frequent to florfenicol (65%) and tetracycline (50%). Multi-Locus Sequence Typing analysis revealed that ST471 and its closely related variant ST129 collectively constituted the dominant clonal group. A total of 13 resistance genes belonging to 5 major classes were identified, with <em>floR</em> (75%), <em>sul2</em> (50%), and <em>tet</em> (B) (50%) exhibiting the highest prevalence. In the <em>Galleria mellonella</em> model challenged with 1.5 × 10⁷ CFU/larva, ST471 strains exhibited a slower killing rate compared to ST129 strains, while the ST7 strain demonstrated low virulence.</div></div><div><h3>Conclusion</h3><div>This study demonstrates the increasing prevalence of avian <em>P. multocida</em> in China, specifically the sustained circulation of ST129 and the recent emergence of ST471, particularly in ducks. These findings underscore the urgency of continuous monitoring of strain dissemination and the evolution of multidrug resistance, providing a scientific basis for precise and rational antimicrobials use in farms and for blocking the spread of potentially high-risk strains.</div></div>","PeriodicalId":20459,"journal":{"name":"Poultry Science","volume":"105 4","pages":"Article 106524"},"PeriodicalIF":4.2,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146119744","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Follicle stimulating hormone stimulates farnesyl-diphosphate farnesyltransferase 1 expression through LSD1Ser54p in chicken ovarian granulosa cells 促卵泡激素通过LSD1Ser54p刺激鸡卵巢颗粒细胞中法尼基二磷酸法尼基转移酶1的表达。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106538
Yanhong Zhang , Min Zhang , Qingxin Liu , Yunliang Jiang
Ovarian follicular development in laying hens is tightly regulated by a variety of endocrine and cellular factors, among which follicle-stimulating hormone (FSH) plays a decisive role. Our previous study demonstrated that phosphorylation of LSD1 at serine 54 (LSD1Ser54p) level increases after follicle selection, and FSH induces LSD1Ser54p in chicken hierarchical follicular granulosa cells (Post-GCs), suggesting a critical role of LSD1Ser54p in chicken follicle selection. To elucidate the underlying mechanism, we first determined the expression pattern of LSD1Ser54p in follicular tissues and confirmed its role in reducing the levels of H3K4me1/2 and H3K9me1/2 in Post-GCs. By integrating transcriptome sequencing and CUT&Tag chromatin analysis, we identified genes that are targeted by FSH and directly bound by LSD1Ser54p, with farnesyl-diphosphate farnesyltransferase 1 (FDFT1) being selected for further investigations. In depth analysis of the histone modification status at the FDFT1 promoter revealed that LSD1Ser54p specifically removes H3K9me1/2 methylation, thereby alleviating chromatin repression and activating FDFT1 transcription, which ultimately promotes the cholesterol synthesis. Our findings reveal an epigenetic regulatory pathway—the FSH-LSD1Ser54p-H3K9me1/2-FDFT1 axis—operating during chicken follicle selection, providing new molecular insights into avian reproductive physiology.
蛋鸡卵巢卵泡发育受多种内分泌和细胞因素的严格调控,其中促卵泡激素(FSH)起着决定性作用。我们之前的研究表明,LSD1在丝氨酸54 (LSD1Ser54p)水平的磷酸化在卵泡选择后升高,FSH在鸡分层卵泡颗粒细胞(后gcs)中诱导LSD1Ser54p,表明LSD1Ser54p在鸡卵泡选择中起关键作用。为了阐明其潜在的机制,我们首先确定了LSD1Ser54p在卵泡组织中的表达模式,并证实了其在降低gcs后H3K4me1/2和H3K9me1/2水平中的作用。通过整合转录组测序和CUT&Tag染色质分析,我们确定了FSH靶向且直接与LSD1Ser54p结合的基因,并选择了法尼基二磷酸法尼基转移酶1 (FDFT1)进行进一步研究。对FDFT1启动子组蛋白修饰状态的深入分析表明,LSD1Ser54p特异性去除H3K9me1/2甲基化,从而减轻染色质抑制,激活FDFT1转录,最终促进胆固醇合成。我们的研究结果揭示了鸡卵泡选择过程中FSH-LSD1Ser54p-H3K9me1/2-FDFT1轴的表观遗传调控通路,为禽类生殖生理学提供了新的分子视角。
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引用次数: 0
Sport improves function of roosters testicular Leydig cells by mediating FUNDC1 运动通过介导FUNDC1改善公鸡睾丸间质细胞功能。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106541
Yuqi Chen , Xinyue Zhao , Jie Zheng , Yao Zhang , Hao Chen , Can Cui , Chunlin Yu , Chaowu Yang , Huadong Yin , Shunshun Han
Roosters play a crucial role in breeder chicken production. A decline in reproductive performance during the late breeding stage is a major factor limiting economic returns. Testosterone, a key hormone for maintaining secondary sexual characteristics and supporting spermatogenesis, is primarily synthesized and processed within mitochondria. With advancing age, mitochondrial function deteriorates in roosters, leading to reduced testosterone synthesis and impaired reproductive capacity. This study aimed to elucidate the mechanisms through which rest and sport affect the reproductive performance of aging roosters. A total of 36 Tianfu Pink roosters aged 110 weeks were allocated into three groups with three replicates per group. After a 4-week intervention involving rest and sport regimens, natural mating was conducted to collect reproductive performance data. The results showed that rest and sport exerted anti-inflammatory effects, significantly improved semen quality and hatching performance, increased serum levels of testosterone and gonadotropins, enhanced systemic antioxidant capacity, and markedly upregulated FUNDC1 expression in the testes. In primary chicken testicular interstitial cells, overexpression or knockdown of FUNDC1 significantly enhanced or suppressed mitochondrial function, as well as the expression of genes and proteins related to antioxidant defense and testosterone synthesis. Moreover, FUNDC1 overexpression alleviated rotenone-induced mitochondrial damage and restored testosterone synthesis in testicular interstitial cells. These findings suggest that sport may enhance testosterone synthesis in testicular interstitial cells by modulating FUNDC1 expression, thereby improving mitochondrial function and antioxidant defense. This study provides theoretical and technical insights for improving the reproductive performance of breeding roosters during the late production phase.
公鸡在种鸡生产中起着至关重要的作用。繁殖后期繁殖性能的下降是限制经济回报的主要因素。睾酮是维持第二性征和支持精子发生的关键激素,主要在线粒体内合成和加工。随着年龄的增长,公鸡的线粒体功能恶化,导致睾酮合成减少和生殖能力受损。本研究旨在阐明休息和运动对老龄公鸡繁殖性能的影响机制。试验选用110周龄天府粉红公鸡36只,随机分为3组,每组3个重复。经过为期4周的干预,包括休息和运动方案,进行自然交配以收集生殖性能数据。结果表明,休息和运动具有抗炎作用,可显著改善蛋鸡精液质量和孵化性能,提高血清睾酮和促性腺激素水平,增强全身抗氧化能力,显著上调睾丸组织FUNDC1表达。在鸡原代睾丸间质细胞中,FUNDC1的过表达或敲低均显著增强或抑制线粒体功能,以及与抗氧化防御和睾酮合成相关的基因和蛋白的表达。此外,FUNDC1过表达可减轻鱼藤酮诱导的线粒体损伤,恢复睾丸间质细胞的睾酮合成。这些发现表明,运动可能通过调节FUNDC1的表达来促进睾丸间质细胞的睾酮合成,从而改善线粒体功能和抗氧化防御。本研究为提高种鸡生产后期的繁殖性能提供了理论和技术见解。
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引用次数: 0
Cecal microbiota and Clostridium perfringens in broilers fed barley-based diets: Effects of enzyme supplementation and degree of grinding 以大麦为基础饲粮的肉鸡盲肠菌群和产气荚膜梭菌:酶添加量和研磨程度的影响。
IF 4.2 1区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Pub Date : 2026-01-28 DOI: 10.1016/j.psj.2026.106543
Eva Lena Estensmo , Camilla Sekse , Franciska S. Steinhoff , Kari Ljøkjel , Khaled Itani , Muhammad Ahmad , Cathrine Arnason Bøe , Siri Kulberg Sjurseth , Silje Granstad
Barley has been proposed as a promising and more sustainable alternative to common cereals in poultry diets. However, the use of barley in poultry diets has historically been limited, mainly due to observed negative impact on gastrointestinal health and performance. In this study, we explored the potential of incorporating barley into broiler diets, focusing on effects on Clostridium perfringens, the causative agent of necrotic enteritis in poultry, and the cecal microbiota. The study included four diets containing 54% barley, with or without the addition of non-starch polysaccharide-degrading enzyme (NSPase), and one control diet without barley. The main ingredients were ground to either a fine or coarse particle size. Low C. perfringens levels were maintained in the intestines of broilers fed barley-based diets, suggesting that barley did not predispose to necrotic enteritis in this study. Broilers fed the coarse barley-based diet with NSPase exhibited the lowest abundance of Lactobacillus and the highest abundance of Faecalibacterium, and their cecal microbiota resembled that of the group fed the control diet. In contrast, broilers fed the coarse barley-based diet without NSPase exhibited the highest abundance of Lactobacillus among all groups in this study, along with a lower abundance of Faecalibacterium. Among the groups that received diets with finely ground barley, regardless of NSPase supplementation, there was no clear shift in the abundance of the two bacterial genera. These observations suggest that feed particle size and NSPase supplementation influence the composition of the cecal microbiota in broilers fed barley-based diets, and that these factors could be utilized as tools to mitigate undesirable health effects associated with the inclusion of barley in poultry diets. The findings of this study highlight the potential of including increased levels of barley in broiler diets without compromising health or performance. Further studies are warranted to explore the effects of similar inclusion levels of different barley varieties on gastrointestinal health and microbiota under varied environmental conditions.
大麦已被认为是家禽饲料中常见谷物的一种有前途和更可持续的替代品。然而,大麦在家禽日粮中的使用一直受到限制,主要是由于观察到对胃肠道健康和生产性能的负面影响。在这项研究中,我们探索了在肉鸡饲粮中添加大麦的潜力,重点研究了大麦对产气荚膜梭菌(家禽坏死性肠炎的病原体)和盲肠微生物群的影响。该研究包括4种饲粮,其中大麦含量为54%,添加或不添加非淀粉多糖降解酶(NSPase),以及1种不添加大麦的对照饲粮。主要原料被磨成细或粗的颗粒大小。在饲喂以大麦为基础的饲粮的肉鸡肠道中维持了较低的产气荚膜梭菌水平,这表明在本研究中大麦不会导致坏死性肠炎。饲粮添加NSPase的粗大麦组肉鸡乳酸菌丰度最低,粪杆菌丰度最高,盲肠菌群与对照组相似。相比之下,在本研究中,饲喂不含NSPase的粗大麦饲粮的肉鸡,乳酸菌的丰度最高,粪杆菌的丰度较低。在食用细磨大麦的组中,无论是否补充NSPase,这两种细菌属的丰度都没有明显的变化。这些观察结果表明,饲料粒度和NSPase的添加会影响饲喂大麦基饲粮的肉鸡盲肠菌群的组成,这些因素可以作为减轻家禽饲粮中添加大麦对健康的不良影响的工具。这项研究的结果强调了在不影响健康或生产性能的情况下,在肉鸡日粮中增加大麦水平的潜力。在不同环境条件下,不同大麦品种相似的包涵水平对胃肠道健康和微生物群的影响值得进一步研究。
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引用次数: 0
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Poultry Science
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