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RNA-based isothermal amplification technology and its clinical application in pathogen infection 基于rna的等温扩增技术及其在病原体感染中的临床应用
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0051
Jie Teng, Fang Liu, Li Chang, Qiu-xia Yang, Guanglu Che, Shuyu Lai, Yuan Tan, Jiaxin Duan, Yongmei Jiang
Abstract It is very important to detect pathogenic bacteria, viruses, or fungi in a patient’s secretion or body fluid samples as soon as possible to determine the patient’s recovery. For certain pathogens, the amount of ribosomal RNA copies contained is often tens of thousands of times higher than the amount of DNA copies, so the detection of RNA has higher sensitivity. In addition, whether for DNA pathogens or RNA pathogens, the direct detection of ribonucleic acid transcribed by pathogens in vivo can distinguish active infection or past infection, can eliminate the influence of residual DNA of pathogens that have died in the lesions, and can also avoid excessive medical interventions for transient infections, which is of great significance in the field of infectious pathogen detection. Isothermal amplification technology played important roles in molecular diagnosis because of its significant advantages. Highly sensitive RNA detection can be achieved by both direct transcription amplification and indirect amplification based on reverse transcription. Direct transcription amplification technologies relies on reverse transcriptase and T7 RNA polymerase to achieve linear transcription amplification of RNA on one-step; while the indirect amplification technology depends on a reverse transcriptional process at the beginning of the reaction. Both methods have outstanding advantages in clinical application, and commercial kits and commercial all-in-one machines based on these principles have been put into clinical use. This review mainly introduces the clinical application of isothermal amplification technologies in the detection of RNA pathogens and the main difficulties faced at this stage. It is hoped to provide insightful ideas for the construction of pathogen RNA detection technology to meet the needs of point-of-care testing in the future.
摘要尽早检测患者分泌物或体液样本中的致病菌、病毒或真菌,对判断患者的康复情况非常重要。对于某些病原体,核糖体所含RNA拷贝数往往比DNA拷贝数高数万倍,因此对RNA的检测具有更高的灵敏度。此外,无论是DNA病原体还是RNA病原体,直接检测病原体在体内转录的核糖核酸,可以区分活动性感染还是既往感染,可以消除病变中已死亡病原体残留DNA的影响,也可以避免对暂时性感染的过度医疗干预,在感染性病原体检测领域具有重要意义。等温扩增技术以其显著的优势在分子诊断中发挥着重要的作用。通过直接转录扩增和基于逆转录的间接扩增均可实现高灵敏度的RNA检测。直接转录扩增技术依靠逆转录酶和T7 RNA聚合酶一步实现RNA的线性转录扩增;而间接扩增技术依赖于反应开始时的逆转录过程。这两种方法在临床应用中都有突出的优势,基于这些原理的商用套件和商用一体机已经投入临床使用。本文主要介绍了等温扩增技术在RNA病原体检测中的临床应用及现阶段面临的主要困难。希望能为今后病原体RNA检测技术的构建提供有见地的思路,以满足护理点检测的需求。
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引用次数: 0
Paper-based microfluidic devices: Fabrication, detection, and significant applications in various fields 纸基微流控装置:制造、检测及在各领域的重要应用
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0037
S. Das, Gagandeep, R. Bhatia
Abstract Paper is the most abundant and inexpensive polymeric structure of cellulose available. Paper has micro-porous capillary-like networks which are responsible for flow of solvents instead of pumps or electronic power, making paper an ideally usable tool. Microfluidic paper-based analytical devices use fabricated paper devices on which hydrophilic zones are formed within hydrophobic barriers. Hydrophilic zones act as regions for actual analytical purposes, whereas hydrophobic zones act to demarcate separate zones from one another. Clinically, these devices have been proved to be excellent point-of-care-devices in diagnosis which can bypass use of costly and time-consuming laboratory techniques. In the presented review, the basic principles and components involved in the design of paper-based devices were then summarised in understandable manner. Further, various applications in different fields were also compiled in the form of text under different sections and tables. Paper-based analytical devices may serve as an excellent tool in variety of analytical works as these techniques are simple, rapid, economic, and require less human power or trainings. They have prominent applications in analysis of biological fluids, drugs/metabolites, food stuffs, colorants, biomarkers, and several other fields.
纸是纤维素中含量最丰富、价格最低廉的聚合物结构。纸具有微孔的毛细管状网络,它负责溶剂的流动,而不是泵或电子电源,使纸成为理想的可用工具。微流控纸基分析装置使用制备的纸装置,其亲水性区域在疏水屏障内形成。亲水区作为实际分析目的的区域,而疏水区作为彼此分开的区域。在临床上,这些设备已被证明是诊断中出色的护理点设备,可以绕过使用昂贵和耗时的实验室技术。在提出的审查,基本原则和组成部分所涉及的设计的纸为基础的设备,然后总结在可理解的方式。此外,还在不同的章节和表格下以文本的形式汇编了不同领域的各种申请。基于纸张的分析设备由于其简单、快速、经济、不需要人力或培训等优点,可以作为各种分析工作的优秀工具。它们在生物流体、药物/代谢物、食品、着色剂、生物标志物和其他几个领域的分析中有着突出的应用。
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引用次数: 17
Fabrication of ultra-sensitive carbon paste electrode with nanocomposite CdS modification for electroanalysis of rafoxanide in dosage form and biological fluids 纳米复合CdS修饰超灵敏碳糊电极的制备及其对拉福昔尼剂型和生物流体的电分析
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0048
W. M. Salem, Mohamed A. Abdel-Lateef, Mohamed A. Abdel Hamid, Hany A. Batakoushy
Abstract An anthelmintic, rafoxanide (RF), is frequently used in veterinary medicine to cure fascioliasis in cattle and sheep. A sensitive, quick, and selective detection of RF in its pharmaceutical preparation and in human urine was achieved through developing a new electrochemical sensor. The suggested method relied on the electro-oxidation of RF that used a modified carbon paste electrode in the presence of sodium dodecyl sulfate, which acts as an anionic surfactant. Voltammetric types were utilized in RF analysis, and these methods were cyclic voltammetry and differential pulse techniques. The suggested electro-analytical method’s validity is verified using the International Council on Harmonization (ICH/Q2) rules. The calibration curve for RF quantification was done in the concentration range from 2.9 × 10−6 to 3.1 × 10−4 M at cadmium sulfide modified carbon paste electrode. The limit of detection and the limit of quantification LOQ were found to be 6.7 × 10−7 M and 2.01 × 10−6 M, respectively. This study could be applied to the examined drug in QC-laboratory units, and also RF could be assayed in its pharmacokinetic studies. Graphical abstract
摘要拉福昔尼(rafoxanide, RF)是一种驱虫药,常用来治疗牛羊片吸虫病。通过开发一种新的电化学传感器,实现了对药物制剂和人体尿液中RF的灵敏、快速和选择性检测。建议的方法依赖于RF的电氧化,使用修饰的碳糊电极在十二烷基硫酸钠的存在下,作为阴离子表面活性剂。射频分析采用伏安法,即循环伏安法和差分脉冲法。采用国际协调委员会(ICH/Q2)规则验证了建议的电分析方法的有效性。在2.9 × 10−6 ~ 3.1 × 10−4 M的浓度范围内,在硫化镉修饰碳糊电极上绘制了射频定量的校准曲线。检测限为6.7 × 10−7 M,定量定量限为2.01 × 10−6 M。本研究可应用于qc实验室单位的被试药物,也可用于RF的药代动力学研究。图形抽象
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引用次数: 0
Enrichment and analysis of glycated proteins 糖化蛋白的富集和分析
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0036
S. Cho, Van-An Duong, Jeong-Hun Mok, MinJoong Joo, Jong-Moon Park, Hookeun Lee
Abstract Glycation is a spontaneous post-translational modification of lysine, arginine, and the N-terminus of proteins. Protein glycation is closely related to the pathogenesis of human diseases, including diabetes, Alzheimer’s disease, renal disease, and cancer. The levels of advanced glycation end products (AGEs) are positively correlated with the progression of many diseases. However, it remains challenging to analyze glycation-related products, such as reactive carbonyl species, Schiff bases, Amadori compounds, and AGEs, because of their high heterogeneity. Many analysis methods, such as fluorescence detection, immunoassays, and liquid chromatography-tandem mass spectrometry, have attempted to correlate glycation products with diseases. Some enrichment methods have been used to increase the probability of detection of glycated proteins due to their low abundance in blood plasma. This review summarizes the enrichment and analysis methods that are currently used to identify glycation as a disease biomarker in exploratory studies.
糖基化是赖氨酸、精氨酸和蛋白质n端在翻译后的自发修饰。蛋白质糖化与人类疾病的发病机制密切相关,包括糖尿病、阿尔茨海默病、肾脏疾病和癌症。晚期糖基化终产物(AGEs)的水平与许多疾病的进展呈正相关。然而,糖基化相关产物的分析仍然具有挑战性,如活性羰基物质、希夫碱、Amadori化合物和AGEs,因为它们具有高度的异质性。许多分析方法,如荧光检测、免疫测定和液相色谱-串联质谱法,都试图将糖基化产物与疾病联系起来。由于糖化蛋白在血浆中的丰度较低,一些富集方法已被用于增加检测糖化蛋白的概率。本文综述了目前用于鉴定糖基化作为探索性研究中的疾病生物标志物的富集和分析方法。
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引用次数: 7
Applications of headspace solid-phase microextraction in human biological matrix analysis 顶空固相微萃取在人体生物基质分析中的应用
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0042
X. Ji
Abstract The inherent complexity of the human biological matrix and its importance in modern medical diagnosis and medical research promote the development of modern analytical technology. Solid-phase microextraction technology has been widely used in the treatment and analysis of different complex biological matrices due to its smaller sample size, simpler sample preparation and setting, and lower consumption of harmful chemicals. This review provides updated information on headspace solid-phase microextraction combined with gas chromatography technique applications, focusing on the analysis of volatile and semivolatile compounds in human biological matrices. The application of headspace solid-phase microextraction combined with gas chromatography techniques in human biological matrix analysis is mainly summarized into three aspects, namely, to discover biomarkers, to investigate volatile metabolomics, and to explore the effect of the external environment on volatile metabolomics of the human biological matrix. In addition, the frequently used statistical analytical methods are summarized, and the application prospect of solid-phase microextraction in the analysis of human biological matrices is proposed.
人体生物基质的内在复杂性及其在现代医学诊断和医学研究中的重要性推动了现代分析技术的发展。固相微萃取技术因其样品体积小、样品制备和设置简单、有害化学物质消耗少等优点,已广泛应用于各种复杂生物基质的处理和分析。本文综述了顶空固相微萃取结合气相色谱技术应用的最新进展,重点介绍了人体生物基质中挥发性和半挥发性化合物的分析。顶空固相微萃取结合气相色谱技术在人体生物基质分析中的应用主要归纳为三个方面,即发现生物标志物、研究挥发性代谢组学、探索外部环境对人体生物基质挥发性代谢组学的影响。此外,总结了常用的统计分析方法,并提出了固相微萃取在人体生物基质分析中的应用前景。
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引用次数: 1
Chemometric determination of common cold infection drugs in human urine 人尿中普通感冒感染药物的化学计量学测定
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0040
G. Ertokus
Abstract In this work, spectrophotometric identification of acetylsalicylic acid (ASA), paracetamol (PCM), and caffeine (CAF) (common cold infection drugs) in human urine samples was investigated. For ASA, PCM, and CAF, chemometric analysis of human urine samples has proved successful. Spectrophotometric analysis of common cold infection drugs was performed using multivariate calibration methods (principal component regression [PCR] and partial least-squares regression). For the simultaneous prediction of common cold infection drugs in prepared mixes and human urine samples without prior separation, two spectrophotometric-chemometric approaches were proposed. The synthetic mixes were made with common cold infection drugs in the first stage, and the absorbance values were obtained using spectrophotometry. The quantities of common cold infection drugs in the human urine sample were calculated in the second stage. The calibration curves for each medication are linear in the concentration range of the synthetic mixes. The two methods were tested for accuracy and repeatability, and high recoveries and low standard deviations were calculated. sum of prediction residual errors, observation limit, and detection limit, and % recovery values, which are the analytical properties of the proposed methods, were 0.00029, 0.096, and 0.290, respectively; 0.0069, 0.086, and 0.260; 0.0077, 0.094, and 0.285; 0.0049, 0.066, and 0.199 for PCM, ASA, and CAF for the principal component regression method, respectively; 0.0059, 0.066, and 0.199; 0.0065, 0.069, and 0.210. The results produced using the employed chemometric methods are quick, easy, and consistent. The proposed methods are extremely sensitive and precise and have thus been effectively employed to detect active chemicals (ASA, PCM, and CAF) in human urine samples.
摘要本文研究了用分光光度法鉴别人尿样品中乙酰水杨酸(ASA)、扑热息痛(PCM)和咖啡因(CAF)(普通感冒感染药物)的方法。对于ASA、PCM和CAF,人类尿液样本的化学计量分析已被证明是成功的。采用多元校正方法(主成分回归[PCR]和偏最小二乘回归)对普通感冒感染药物进行分光光度分析。为了在不进行预先分离的情况下同时预测普通感冒感染药物的配制混合物和人尿样品,提出了两种分光光度-化学测定方法。第一阶段用普通感冒感染药物配制合成混合物,用分光光度法测定吸光度值。第二阶段计算人体尿液样本中普通感冒感染药物的含量。每种药物的校准曲线在合成混合物的浓度范围内呈线性关系。对两种方法进行了准确性和重复性检验,并计算了高回收率和低标准偏差。预测残差、观测限、检出限和%回收率分别为0.00029、0.096和0.290;0.0069, 0.086, 0.260;0.0077、0.094和0.285;主成分回归方法的PCM、ASA和CAF分别为0.0049、0.066和0.199;0.0059, 0.066, 0.199;0.0065、0.069和0.210。采用化学计量学方法得到的结果快速、简便、一致。所提出的方法非常敏感和精确,因此已被有效地用于检测人类尿液样本中的活性化学物质(ASA, PCM和CAF)。
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引用次数: 0
A review of the application of comprehensive two-dimensional gas chromatography MS-based techniques for the analysis of persistent organic pollutants and ultra-trace level of organic pollutants in environmental samples 综述了综合二维气相色谱质谱技术在环境样品中持久性有机污染物和超痕量有机污染物分析中的应用
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0034
Oliver Vaye, R. S. Ngumbu, Dan Xia
Abstract Analysis of complex samples in environmental matrices poses extreme challenge for analytical chemists as the number of known and unknown compounds are numerous and have varying physical and chemical properties. The introduction, over the past decade, of comprehensive two-dimensional (2D) gas chromatography (GC × GC) paired with mass spectrometry (MS) has tremendously changed the analytical profiles of ultra-trace levels of organic pollutants from different environmental media. This review article provides a summary of selected articles using comprehensive 2D GC/MS-based methodologies from January 2014 to August 2019. The applications of various MS detectors, such as single (Q) and triple (QqQ) quadrupole, low resolution and high resolution time-of-flight (TOF), and the hybrid (quadrupole TOF-MS), coupled to GC × GC, and their benefits for analyzing persistent and emerging organic pollutants when applied to different environmental matrices were discussed. Emphasis was given to reviewing some applications of GC × GC-electron capture detector (ECD) and GC × GC-μECD within the specified period as these detectors have improved selectivity and sensitivity toward halogenated (bromine and chloride) compounds found in ultra-trace levels of environmental media.
环境基质中复杂样品的分析对分析化学家提出了极大的挑战,因为已知和未知的化合物数量众多,并且具有不同的物理和化学性质。在过去的十年中,全面的二维(2D)气相色谱(GC × GC)与质谱(MS)相结合的引入极大地改变了来自不同环境介质的超痕量有机污染物的分析概况。这篇综述文章提供了2014年1月至2019年8月期间使用综合2D GC/ ms方法的选定文章的摘要。讨论了单(Q)和三(QqQ)四极杆、低分辨率和高分辨率飞行时间(TOF)、混合(四极杆TOF-MS)与GC × GC耦合的各种质谱检测器的应用,以及它们在不同环境基质中分析持久性和新兴有机污染物的优势。重点介绍了GC × GC-电子捕获检测器(ECD)和GC × GC-μECD在特定时间内对环境介质中超痕量卤化(溴和氯)化合物的选择性和灵敏度的提高。
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引用次数: 4
Recent applications of quantitative analytical FTIR spectroscopy in pharmaceutical, biomedical, and clinical fields: A brief review FTIR光谱定量分析在制药、生物医学和临床领域的最新应用综述
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0030
Khairi Mustafa Salem Fahelelbom, A. Saleh, M. Al-Tabakha, A. Ashames
Abstract Qualitative Fourier transform infrared (FTIR) spectroscopy has long been established and implemented in a wide variety of fields including pharmaceutical, biomedical, and clinical fields. While the quantitative applications are yet to reach their full potential, this technique is flourishing. It is tempting to shed light on modern engaging and the applicability of analytical quantitative FTIR spectroscopy in the aforementioned fields. More importantly, the credibility, validity, and generality of the application will be thoroughly demonstrated by reviewing the latest published work in the scientific literature. Utilizing FTIR spectroscopy in a quantitative approach in pharmaceutical, biomedical, and interdisciplinary fields has many undeniable advantages over traditional procedures. An insightful account will be undertaken in this regard. The technique will be introduced as an appealing alternative to common methods such as high performance liquid chromatography. It is anticipated that the review will offer researchers an update of the current status and prospect on the subject among the pharmacy and biomedical sciences both in academic and industrial fields.
定性傅里叶变换红外(FTIR)光谱技术早已建立,并广泛应用于制药、生物医学和临床等领域。虽然定量应用尚未充分发挥其潜力,但这种技术正在蓬勃发展。分析定量FTIR光谱学在上述领域的现代应用和适用性是很有诱惑力的。更重要的是,通过回顾科学文献中最新发表的工作,将彻底证明该应用程序的可信性、有效性和普遍性。在制药、生物医学和跨学科领域使用FTIR光谱的定量方法与传统方法相比具有许多不可否认的优势。在这方面将进行深刻的论述。该技术将作为一种有吸引力的替代常见的方法,如高效液相色谱法。本文将为药学和生物医学领域的研究人员提供最新的研究现状和展望。
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引用次数: 13
Analysis of initiator content of prepreg by near-infrared spectroscopy 近红外光谱分析预浸料引发剂含量
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0035
Qian Liu, Dan Li, Chiji Guan
Abstract During the production process of some copper clad laminate (CCL), the content of 3,3,5,7,7-pentamethyl-1,2,4-trioxepane in prepreg can affect the cross-linking and curing degree of resin directly, and thereby affect the properties of CCL. In this article, near-infrared (NIR) spectroscopy combined with partial least square regression using high performance liquid chromatography as a reference method were used for the determination of 3,3,5,7,7-pentamethyl-1,2,4-trioxepane in the CCL production progress. 160 spectra of prepreg samples randomly formed the calibration set, and 50 spectra of prepreg samples formed the validation set. The value of the root mean square error of calibration (w/w) and root mean square error of prediction (w/w) were 0.011% and 0.013% for 3,3,5,7,7-pentamethyl-1,2,4-trioxepane content (%, w/w), and the calculation and validation of the regression equation resulted in high correlation coefficients of 0.99 and 0.98, respectively. The scatter plot value of calibration set which was obtained from the root mean square error of cross-validation (w/w) was 0.015%, and the regression equation resulted in high correlation coefficient of 0.98. The results of the paired t-test revealed that there was no significant difference between NIR and HPLC method. Thus, the results obtained in this study reflect that NIR could be used as a rapid, accurate, and simultaneous technique to determine 3,3,5,7,7-pentamethyl-1,2,4-trioxepane content of prepreg in the production process.
摘要在某些覆铜层压板(CCL)的生产过程中,预浸料中3,3,5,7,7-五甲基-1,2,4-三氧基烷的含量直接影响树脂的交联和固化程度,从而影响覆铜层压板的性能。本文以高效液相色谱法为参比方法,采用近红外光谱法结合偏最小二乘回归法测定了CCL生产过程中3,3,5,7,7-五甲基-1,2,4-三氧杂烷的含量。160个预浸料样品的光谱随机组成校准集,50个预浸料样品的光谱随机组成验证集。3、3、5、7、7-五甲基-1,2,4-三氧杂烷含量(%,w/w)的校正均方根误差(w/w)和预测均方根误差(w/w)分别为0.011%和0.013%,回归方程的计算和验证的相关系数分别为0.99和0.98。交叉验证均方根误差(w/w)得到的校正集散点图值为0.015%,回归方程的相关系数为0.98。配对t检验结果显示,近红外光谱法与高效液相色谱法无显著差异。因此,本研究结果表明,近红外光谱可以作为一种快速、准确、同时测定生产过程中预浸料中3,3,5,7,7-五甲基-1,2,4-三氧杂烷含量的技术。
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引用次数: 0
Review of characteristics and analytical methods for determination of indomethacin 吲哚美辛的特征及分析方法综述
IF 4.3 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2022-01-01 DOI: 10.1515/revac-2022-0032
Andrea Dandic, Katarina Rajkovača, Marija Jozanović, Iva Pukles, A. Széchenyi, Mateja Budetić, Mirela Samardžić
Abstract Nonsteroidal anti-inflammatory drugs (NSAIDs) are the first choice of treatment for rheumatic disorders and other degenerative inflammatory diseases. One of them, indomethacin (INDO), is highlighted in this study. With its analgesic, antipyretic, and anti-inflammatory properties, it is one of the most powerful drugs used in various clinical trials and therapies related to the mechanism of blocking prostaglandin synthesis, thus reducing and eliminating many inflammatory conditions in patients. To ensure the efficacy and safety of this drug in pharmaceutical and clinical use, precise product quality control is required. Such control is performed with routine pharmaceutical analysis using various chemical methods by which INDO is identified as a separate active ingredient in the multicomponent system of a complete pharmaceutical form. In addition, the determination of INDO is important in clinical practice, where its concentration is determined in different biological samples, ensuring better monitoring of a particular therapy. The most commonly used methods for the determination of INDO are high-performance liquid chromatography (37% of developed methods), voltammetry (16% of developed methods), and UV spectroscopy (11% of developed methods). However, each of these methods must provide precise validation parameters. A combination of analytical methods can lead to more precise results and safer application in practice.
非甾体类抗炎药(NSAIDs)是治疗风湿性疾病和其他退行性炎症性疾病的首选药物。其中,吲哚美辛(indomethacin, INDO)是本研究的重点。它具有镇痛、解热和抗炎的特性,是用于阻断前列腺素合成机制的各种临床试验和治疗中最有效的药物之一,从而减少和消除患者的许多炎症。为保证该药在制药和临床使用中的有效性和安全性,需要对产品进行精确的质量控制。这种控制是通过使用各种化学方法进行常规药物分析来进行的,通过这些化学方法,INDO被确定为完整药物形式的多组分系统中的单独活性成分。此外,INDO的测定在临床实践中很重要,在临床实践中,INDO的浓度是在不同的生物样品中测定的,从而确保更好地监测特定治疗。最常用的INDO测定方法是高效液相色谱法(已开发方法的37%)、伏安法(已开发方法的16%)和紫外光谱法(已开发方法的11%)。但是,每种方法都必须提供精确的验证参数。多种分析方法的结合可以得到更精确的结果,在实际应用中也更安全。
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引用次数: 4
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