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A new sauropod dinosaur hindlimb from the Lower Cretaceous Wessex Formation, Isle of Wight, UK. 英国怀特岛下白垩世韦塞克斯地层出土的新蜥脚类恐龙后肢。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-30 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240642
Robert R Higgins, Philip D Mannion, Paul M Barrett, Paul Upchurch

The Barremian-aged Wessex Formation of the Isle of Wight, UK, offers a globally significant glimpse into the sauropod dinosaur faunas of the early Cretaceous. These deposits have yielded specimens of several neosauropod lineages, such as rebbachisaurids, titanosauriforms (including some of the earliest titanosaur remains), and possible flagellicaudatans. Here, we report an undescribed sauropod partial hindlimb from the Wessex Formation (NHMUK PV R16500) and analyse its phylogenetic affinities. This hindlimb preserves the left tibia, astragalus and pes, lacking only a few phalanges. NHMUK PV R16500 can be diagnosed based on two autapomorphies: an unusually high distal end to midshaft transverse width ratio in metatarsals III and IV, and the presence of small bump-like projections located in the centre of the proximal articular surfaces of the unguals of pedal digits I and II. The phylogenetic affinities of NHMUK PV R16500 are uncertain: although our analyses recover it as an early-branching somphospondylan, a single character change moves it to close to Flagellicaudata when extended implied weighting is applied. The possibility of flagellicaudatan affinities for NHMUK PV R16500 implies a potential ghost lineage that survived the Jurassic/Cretaceous boundary; however, we present evidence that the somphospondylan position is more probable and should be preferred.

英国怀特岛巴里米亚时代的威塞克斯地层(Wessex Formation)为了解白垩纪早期的蜥脚类恐龙群提供了一个具有全球意义的窗口。这些沉积层出土了多个新蜥脚类恐龙家族的标本,如反齿龙类、泰坦龙类(包括一些最早的泰坦龙遗骸)以及可能的鞭毛龙类。在这里,我们报告了来自威塞克斯地层(NHMUK PV R16500)的一个未被描述过的蜥脚类部分后肢,并分析了它的系统发育亲缘关系。该后肢保留了左侧胫骨、距骨和趾骨,仅缺少几根趾骨。NHMUK PV R16500可以根据两个自体形态进行诊断:跖骨III和IV的远端与中轴横向宽度比异常高,以及位于跖骨I和II近端关节面中央的小凸起。NHMUK PV R16500 的系统发育亲缘关系尚不确定:尽管我们的分析将其恢复为早期分支的体软骨鱼类,但在应用扩展的隐含加权法时,单个特征的变化使其接近于旗形目(Flagellicaudata)。NHMUK PV R16500 可能与鞭毛目(flagellicaudatan)有亲缘关系,这意味着它可能是一个在侏罗纪/白垩纪交界处幸存下来的鬼系;不过,我们提出的证据表明,体表软骨鱼类的位置更有可能发生变化,因此应优先考虑体表软骨鱼类。
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引用次数: 0
The Pvc15 ATPase selectively associates effector proteins with the Photorhabdus virulence cassette. Pvc15 ATP 酶选择性地将效应蛋白与光照杆菌毒力盒结合在一起。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240948
Rhys Evans, Nicholas R Waterfield

The Photorhabdus virulence cassette (PVC) is an extracellular contractile injection system. In the producing bacterium, N-terminal signal peptides enable effector 'payloads' to be loaded into the PVC's hollow tube-facilitated by the 'ATPases associated with diverse cellular activities' (AAA) ATPase, Pvc15-ready for injection of the toxin or virulence factor into eukaryotic cytosols. Pvc15's function and its interaction with the signal peptide were unclear. This study describes the signal peptide diversity in extracellular contractile injection system clades and interrogates the Pvc15-signal peptide interaction using ATPase assays, cell respiratory assays and western blot quantification of Escherichia coli lysates and co-purifications of PVCs with their payloads. This study found that extracellular contractile injection system signal peptides can be grouped according to sequence alignment, owing to potentially homologous loading mechanisms. Pvc15 contains three domains, including tandem AAA domains D1 and D2. By constructing Pvc15 mutants, we found that while each domain is necessary for PVC-payload loading, domain D2 is the sole bioactive ATPase domain and rescues unstable payloads via the signal peptide. Finally, truncating the signal peptide abolishes Pvc15-dependent PVC loading and has varying effects on payload stability. This study provides crucial insights into extracellular contractile injection system effector loading mechanisms and their ATPase chaperones, and suggests that these devices could be bioengineered for injection of therapeutic proteins into human cells.

光照杆菌毒力盒(PVC)是一种细胞外收缩注射系统。在生产细菌中,N端信号肽使效应 "有效载荷 "能够通过 "与多种细胞活动相关的 ATP 酶"(AAA)ATP 酶 Pvc15 装入 PVC 的空心管中,以便将毒素或毒力因子注入真核细胞溶液中。Pvc15 的功能及其与信号肽的相互作用尚不清楚。本研究描述了细胞外收缩注射系统支系中信号肽的多样性,并使用 ATPase 检测法、细胞呼吸检测法和大肠杆菌裂解物的 Western 印迹定量法以及 PVC 与其有效载荷的共纯化法来研究 Pvc15 与信号肽的相互作用。这项研究发现,由于潜在的同源负载机制,细胞外收缩注射系统信号肽可根据序列比对进行分组。Pvc15 包含三个结构域,其中包括串联 AAA 结构域 D1 和 D2。通过构建 Pvc15 突变体,我们发现虽然每个结构域都是 PVC 有效载荷装载所必需的,但结构域 D2 是唯一具有生物活性的 ATPase 结构域,可通过信号肽挽救不稳定的有效载荷。最后,截短信号肽会取消 Pvc15 依赖性 PVC 负载,并对有效载荷的稳定性产生不同的影响。这项研究为了解细胞外收缩注射系统效应物的装载机制及其 ATPase 合子提供了重要信息,并表明这些装置可以通过生物工程技术将治疗蛋白注射到人体细胞中。
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引用次数: 0
Receiver response to high-intensity courtship differs with courter status in spotted bowerbirds Ptilonorhynchus maculatus. 受体对高强度求偶的反应随斑头雁的求偶者身份而异。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.232015
Giovanni Spezie, Dan C Mann, Job Knoester, Thomas MacGillavry, Leonida Fusani

Understanding sexual communication requires assessing the behaviour of both the sender and the receiver. Receiver responses to sexual displays carry relevant information, but such signals or cues may be subtle and therefore technically challenging to investigate. Here, we focus on receiver body movements in response to high-intensity courtship in spotted bowerbirds (Ptilonorhynchus maculatus). Male bowerbirds perform a vigorous courtship choreography on dedicated display structures-bowers. Bower owners tolerate other non-territorial males at their bowers, yet the courtship displays of these so-called 'subordinate' males rarely result in successful copulations. Males that display at high intensity are preferred by females in this species, yet excessively aggressive displays may be threatening, hence scaring prospective mates away. In this study, we hypothesized that bower owners are better able to exhibit high-intensity movements without startling their audience compared with subordinate males. To address this question, we used a combination of behavioural coding and AI-based tracking of body movements, which allows precise spatial and temporal resolution for the study of subtle behavioural responses. Contrary to our predictions, we found that bower owners evoked stronger startle responses than subordinate males. We discuss these unexpected results and suggest further experimental approaches for future investigations.

了解性交流需要评估发送者和接收者的行为。接收者对性展示的反应包含相关信息,但这些信号或线索可能很微妙,因此在技术上具有研究难度。在这里,我们重点研究了斑腰鸟(Ptilonorhynchus maculatus)在高强度求偶时接收者的身体运动。雄性斑腰鸟在专用的展示结构--花棚上进行激烈的求偶编排。展示台的主人允许其他非领地雄鸟在其展示台上展示,但这些所谓的 "从属 "雄鸟的求偶很少能成功交配。在该物种中,高强度展示的雄性更受雌性青睐,但过度的攻击性展示可能具有威胁性,从而吓跑潜在的配偶。在本研究中,我们假设与从属雄性相比,雌性雄性能更好地展示高强度动作,而不会惊吓到观众。为了解决这个问题,我们结合使用了行为编码和基于人工智能的肢体运动追踪技术,这种技术可以精确地分辨空间和时间,从而研究细微的行为反应。与我们的预测相反,我们发现碉堡主人比从属雄性唤起了更强烈的惊吓反应。我们讨论了这些出乎意料的结果,并为今后的研究提出了进一步的实验方法。
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引用次数: 0
Correction to: 'Rostrum morphology and feeding strategy of the baleen whale indicate that right whales and pygmy right whales became skimmers independently' (2022), by Tanaka. 更正:须鲸的筑巢形态和觅食策略表明露脊鲸和侏儒露脊鲸是独立成为掠食者的"(2022年),作者:Tanaka。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.241686
Yoshihiro Tanaka

[This corrects the article DOI: 10.1098/rsos.221353.].

[此处更正了文章 DOI:10.1098/rsos.221353]。
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引用次数: 0
Behavioural responses of common dolphins to naval sonar. 普通海豚对海军声纳的行为反应。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240650
Brandon L Southall, John W Durban, John Calambokidis, Caroline Casey, James A Fahlbusch, Holly Fearnbach, Kiirsten R Flynn, Selene Fregosi, Ari S Friedlaender, Samantha G M Leander, Fleur Visser

Despite strong interest in how noise affects marine mammals, little is known for the most abundant and commonly exposed taxa. Social delphinids occur in groups of hundreds of individuals that travel quickly, change behaviour ephemerally and are not amenable to conventional tagging methods, posing challenges in quantifying noise impacts. We integrated drone-based photogrammetry, strategically placed acoustic recorders and broad-scale visual observations to provide complementary measurements of different aspects of behaviour for short- and long-beaked common dolphins. We measured behavioural responses during controlled exposure experiments (CEEs) of military mid-frequency (3-4 kHz) active sonar (MFAS) using simulated and actual Navy sonar sources. We used latent-state Bayesian models to evaluate response probability and persistence in exposure and post-exposure phases. Changes in subgroup movement and aggregation parameters were commonly detected during different phases of MFAS CEEs but not control CEEs. Responses were more evident in short-beaked common dolphins (n = 14 CEEs), and a direct relationship between response probability and received level was observed. Long-beaked common dolphins (n = 20) showed less consistent responses, although contextual differences may have limited which movement responses could be detected. These are the first experimental behavioural response data for these abundant dolphins to directly inform impact assessments for military sonars.

尽管人们对噪声如何影响海洋哺乳动物有着浓厚的兴趣,但对数量最多、最常受噪声影响的类群却知之甚少。社会性的三角鳍类动物以数百只为一组,它们旅行迅速,行为变化短暂,不适合采用传统的标记方法,这给量化噪声影响带来了挑战。我们将无人机摄影测量、战略性放置的声学记录器和大范围的视觉观察结合起来,对短喙和长喙普通海豚行为的不同方面进行补充测量。我们使用模拟和实际的海军声纳源测量了军用中频(3-4 kHz)主动声纳(MFAS)受控暴露实验(CEEs)期间的行为反应。我们使用潜态贝叶斯模型来评估暴露和暴露后阶段的反应概率和持续性。在 MFAS CEEs 的不同阶段,亚群运动和聚集参数的变化被普遍检测到,而对照 CEEs 则没有。短吻普通海豚的反应更为明显(n = 14 CEEs),并且观察到反应概率与接收水平之间存在直接关系。长喙普通海豚(n = 20)的反应不太一致,尽管环境差异可能限制了可检测到的运动反应。这是首次对这些数量众多的海豚进行实验性行为反应数据,可直接为军用声纳的影响评估提供信息。
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引用次数: 0
Investigating the impact of environmental feedback on the optional prisoner's dilemma for insights into cyclic dominance and evolution of cooperation. 研究环境反馈对可选囚徒困境的影响,以深入了解循环优势和合作进化。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240717
Md Fahimur Rahman Shuvo, K M Ariful Kabir

This study incorporates environmental feedback into the optional prisoner's dilemma and rock-paper-scissors games to examine the mutual influence of eco-evolutionary outcomes and strategy dynamics. A novel game-theoretic model is developed that integrates the optional prisoner's dilemma and rock-paper-scissors games by incorporating an environmental state variable. By adjusting feedback parameters, chaos, oscillations and coexistence are observed that surpass the usual outcomes of social dilemmas when the environment transitions between depleted and replenished states. Defection is no longer advantageous in evolution; cooperation, abstention and cyclic dominance arise. The observed transitions align with natural economics, ecology and sociology phenomena. The inclusion of abstention options and environmental feedback has a significant impact on collective outcomes when compared with conventional games. This has important implications for studying adaptation and decision-making in situations with ecological constraints.

本研究将环境反馈纳入可选的囚徒困境和剪刀石头布博弈中,以研究生态进化结果和策略动态的相互影响。本研究建立了一个新颖的博弈论模型,通过加入环境状态变量,将可选的囚徒困境和剪刀石头布博弈整合在一起。通过调整反馈参数,当环境在枯竭和补充状态之间转换时,观察到的混乱、振荡和共存现象超越了社会困境的通常结果。在进化过程中,背叛不再是有利的;合作、弃权和周期性优势出现了。观察到的过渡与自然经济学、生态学和社会学现象一致。与传统博弈相比,加入弃权选项和环境反馈会对集体结果产生重大影响。这对研究生态限制情况下的适应和决策具有重要意义。
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引用次数: 0
Reconstructing the invention of the wheel using computational structural analysis and design. 利用计算结构分析和设计重建车轮的发明。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240373
Lee R Alacoque, Richard W Bulliet, Kai A James

The invention of the wheel is widely credited as a pivotal moment in human history, yet the details surrounding its discovery are shrouded in mystery. There remains no scholarly consensus on key questions such as where, how and by whom this technology was originally invented. In this study, we employ state-of-the-art techniques from computational structural mechanics to shed light on this long-standing puzzle. Based on this analysis, we propose a probable path along which the wheel evolved via a sequence of three major innovations. We also introduce an original computational design algorithm that autonomously generates a wheel-and-axle system using an evolutionary process that offers insight into the way in which the first wheels likely evolved nearly 6000 years ago. Our analysis provides new supporting evidence for the recently advanced theory that the wheel was invented by Neolithic miners harvesting copper ore from the Carpathian Mountains as early as 3900 BC. Moreover, we show how the discovery of the wheel was made possible by the unique physical features of the mine environment, whose impact was analogous to the selective environmental pressures that drive biological evolution.

车轮的发明被广泛认为是人类历史上的关键时刻,然而围绕其发现的细节却被蒙上了一层神秘的面纱。对于这项技术最初是在哪里、如何以及由谁发明的等关键问题,学术界仍未达成共识。在这项研究中,我们采用了计算结构力学的最新技术来揭示这一长期存在的谜团。在此分析基础上,我们提出了车轮通过三大创新演变的可能路径。我们还介绍了一种独创的计算设计算法,该算法利用进化过程自主生成车轮和车轴系统,有助于深入了解近 6000 年前第一批车轮可能的进化方式。我们的分析为最近提出的理论提供了新的佐证,即车轮是早在公元前 3900 年从喀尔巴阡山脉开采铜矿的新石器时代矿工发明的。此外,我们还展示了矿山环境的独特物理特征是如何使车轮的发现成为可能的,其影响类似于推动生物进化的选择性环境压力。
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引用次数: 0
Skull evolution and lineage diversification in endemic Malagasy carnivorans. 马达加斯加特有食肉动物的头骨进化和品系多样化。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-23 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240538
Chris J Law, Tate J Linden, John J Flynn

Madagascar is one of the world's foremost biodiversity hotspots with more than 90% of its species endemic to the island. Malagasy carnivorans are one of only four extant terrestrial mammalian clades endemic to Madagascar. Although there are only eight extant species, these carnivorans exhibit remarkable phenotypic and ecological diversity that is often hypothesized to have diversified through an adaptive radiation. Here, we investigated the evolution of skull diversity in Malagasy carnivorans and tested if they exhibited characteristics of convergence and an adaptive radiation. We found that their skull disparity exceeds that of any other feliform family, as their skulls vary widely and strikingly capture a large amount of the morphological variation found across all feliforms. We also found evidence of shared adaptive zones in cranial shape between euplerid subclades and felids, herpestids and viverrids. Lastly, contrary to predictions of adaptive radiation, we found that Malagasy carnivorans do not exhibit rapid lineage diversification and only marginally faster rates of mandibular shape evolution and to a lesser extent cranial shape evolution, compared to other feliforms. These results reveal that exceptional diversification rates are not necessary to generate the striking phenotypic diversity that evolved in carnivorans after their dispersal to and isolation on Madagascar.

马达加斯加是世界上最重要的生物多样性热点地区之一,90% 以上的物种都是岛上特有的。马达加斯加食肉动物是马达加斯加仅有的四个现存陆生哺乳动物支系之一。虽然仅有八个现存物种,但这些食肉动物却表现出显著的表型和生态多样性,通常被认为是通过适应性辐射实现了多样化。在这里,我们研究了马达加斯加食肉动物头骨多样性的进化,并检验了它们是否表现出趋同和适应性辐射的特征。我们发现它们的头骨差异超过了任何其他猫科动物,因为它们的头骨差异很大,而且惊人地捕捉到了所有猫科动物的大量形态变异。此外,我们还发现了戟形目亚支系与鼬形目类、戟形目类和狸形目类在头骨形状上共享适应区的证据。最后,与适应性辐射的预测相反,我们发现马达加斯加食肉动物并没有表现出快速的品系分化,与其他猫科动物相比,它们的下颌形状进化速度稍快,头颅形状进化速度稍慢。这些结果表明,食肉目动物在迁移到马达加斯加并与世隔绝之后,其惊人的表型多样性并不必然产生。
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引用次数: 0
Himatiichnus mangano igen. et isp. nov., a scalidophoran trace fossil from the late Ediacaran of Namibia. Himatiichnus mangano igen. et isp.
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-16 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240452
Katherine A Turk, Mikaela A Pulsipher, Helke Mocke, Marc Laflamme, Simon A F Darroch

Himatiichnus mangano igen. et isp. nov., a new trace fossil from the late Ediacaran Huns Member of the Urusis Formation, southern Namibia, comprises intertwining tubes exhibiting dual lineation patterns and reminiscent of both modern and early Cambrian examples of priapulid worm burrows. These similarities support the interpretation of a total-group scalidophoran tracemaker for H. mangano, thus providing direct evidence for the first appearance date of Scalidophora in the late Ediacaran ca 539 Ma. This new material is thus indicative of the presence of total-group scalidophorans below the Cambrian boundary and supports inference of a lengthy Precambrian fuse for the Cambrian explosion.

Himatiichnus mangano igen. et isp. nov.是纳米比亚南部 Urusis Formation 埃迪卡拉晚期 Huns 成员中的一种新的痕量化石,它由相互缠绕的管子组成,表现出双重线纹模式,让人联想到现代和寒武纪早期的priapulid蠕虫洞穴。这些相似性支持了对芒果 H. 的全群蝶形虫追踪器的解释,从而为蝶形虫首次出现在埃迪卡拉晚期(约 539 Ma)提供了直接证据。因此,这一新材料表明在寒武纪边界以下存在全群鳞角类,并支持寒武纪大爆发的漫长前寒武纪引信的推断。
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引用次数: 0
Interspecific and intraspecific variation in grasshopper (Orthoptera: Acrididea) molar form: implications for dietary ecology. 蚱蜢(直翅目:蝼蛄科)臼齿形态的种间和种内变异:对食性生态学的影响。
IF 2.9 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-10-16 eCollection Date: 2024-10-01 DOI: 10.1098/rsos.240596
Michael A Berthaume, Matthew J Morley

Like many mammals, grasshoppers (infraorder Acrididea) chew using molariform structures. Despite decades of research on mammals, little is known about grasshopper molar form and how it relates to grasshopper feeding biomechanics, diet, dietary ecology and evolution. Here, we develop a method for quantifying molar form and apply it to two species of distantly related grasshoppers with different diets (Phymateus saxosus, seven females; Valanga nigricornis, seven females, 11 males). We show that there are quantifiable differences in molar form, potentially related to diet. There are some differences in molar shape between left and right molars in both species and sexes, and significant differences in molar size, potentially due to scaling. Like in mammals, molar wear can cause large differences in molar shape. Species differences in molar shape did not match what was expected based on mammalian molar functional morphology. Dental topographic analysis is a promising new avenue for quantifying molar form in grasshoppers and a distinct advantage over traditional two-dimensional microscopy methods, and promises to reveal much about the biology, biomechanics and evolution of Acrididea.

与许多哺乳动物一样,蚱蜢(蚱蜢亚目)使用臼齿状结构进行咀嚼。尽管对哺乳动物进行了数十年的研究,但人们对蚱蜢臼齿的形态以及它与蚱蜢进食生物力学、饮食、饮食生态学和进化之间的关系知之甚少。在这里,我们开发了一种量化臼齿形态的方法,并将其应用于两种不同食性的远缘蚱蜢(Phymateus saxosus,7只雌性;Valanga nigricornis,7只雌性,11只雄性)。我们的研究表明,臼齿形状存在可量化的差异,这可能与饮食有关。在臼齿形状上,雌性和雄性的左右臼齿都存在一些差异,而在臼齿大小上也存在显著差异,这可能与鳞片脱落有关。与哺乳动物一样,臼齿磨损也会导致臼齿形状的巨大差异。臼齿形状的物种差异与哺乳动物臼齿功能形态的预期不符。牙齿地形分析是量化蚱蜢臼齿形态的一个很有前途的新途径,与传统的二维显微镜方法相比具有明显的优势,有望揭示蚱蜢的生物学、生物力学和进化方面的许多问题。
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引用次数: 0
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