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Increasing Chitinase Activity of Serratia marcescens PT-6 through Optimization of Medium Composition 通过优化培养基组成提高粘质沙雷菌PT-6几丁质酶活性
Q3 Environmental Science Pub Date : 2019-12-30 DOI: 10.15578/squalen.v14i3.414
Akhmad Awaludin Agustiar, Imas Faturrohmah, B. Sari, N. Isnaini, I. D. Puspita, T. Triyanto, A. Husni, Ustadi Ustadi
Chitin hydrolysate is one of the value added product derived from shrimp shell waste. Production of chitin hydrolysate using biological process offers an environmental friendly method compared to chemical process. Serratia marcescens PT-6, a gram negative chitinolytic bacterium isolated from shrimp pond sediment, shows good activity in hydrolyzing chitin. This study aimed to improve the chitinase activity of S. marcescens PT-6 culture by optimizing the component of chitin-containing medium (additional nitrogen source, additional carbon source, and colloidal chitin). The optimization of chitinase by S. marcescens PT-6 culture was done using one variable at a time method. The sequence of the research were to optimize 1) the type of additional carbon source (glucose, lactose, sucrose, and starch), 2) the type of additional nitrogen source (yeast extract, peptone, ammonium sulphate, and ammonium chloride), 3) the concentration of colloidal chitin (0.5; 1; 1.5; 2; and 2.5%), and 4) the concentration of the additional carbon and nitrogen source. The culture of S. marcescens PT-6 was incubated in colloidal chitin medium at 30 oC and chitinase activity from culture supernatant was analyzed. The results showed that starch gave the highest chitinase activity compare to other carbon source, meanwhile yeast extract was chosen as the best nitrogen source among others. The combination of 1.5% colloidal chitin with 0.5% starch and 0.1% yeast extract in medium increased the chitinase activity of S. marcescens PT-6 to 0.021 U/ml. These results indicated that an appropriate medium composition could increase the chitinase activity produced by S. marcescens PT-6 culture.
水解几丁质是利用虾壳废弃物开发的高附加值产品之一。与化学法相比,生物法生产几丁质水解物是一种环境友好的方法。粘质沙雷氏菌PT-6是一种分离自对虾池沉积物的革兰氏阴性几丁质水解菌,具有良好的水解几丁质活性。本研究旨在通过优化含几丁质培养基的组成(附加氮源、附加碳源和胶体几丁质)来提高粘质葡萄球菌PT-6培养物的几丁质酶活性。采用单变量法对粘质葡萄球菌PT-6培养的几丁质酶进行了优化。研究顺序为:优化1)附加碳源类型(葡萄糖、乳糖、蔗糖和淀粉),2)附加氮源类型(酵母浸膏、蛋白胨、硫酸铵和氯化铵),3)胶体几丁质浓度(0.5;1;1.5;2;和2.5%),以及4)附加碳氮源的浓度。将粘质葡萄球菌PT-6培养于30℃的胶体几丁质培养基中,分析培养上清的几丁质酶活性。结果表明,淀粉的几丁质酶活性高于其他碳源,而酵母浸膏为最佳氮源。1.5%胶体几丁质与0.5%淀粉和0.1%酵母浸膏的组合使粘多糖PT-6的几丁质酶活性提高至0.021 U/ml。上述结果表明,适当的培养基组成可以提高粘质葡萄球菌PT-6培养的几丁质酶活性。
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引用次数: 1
Back Cover Squalen Bulletin Vol. 14 No. 3 Tahun 2019 封底《角鲨通报》第14卷第3期2019
Q3 Environmental Science Pub Date : 2019-12-30 DOI: 10.15578/squalen.v14i3.421
Squalen Bulletin
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引用次数: 0
Extraction and Partial Characterization of Lectin from Indonesian Brown Algae Padina australis and Padina minor 印尼褐藻南菖蒲和小菖蒲凝集素的提取及部分性质研究
Q3 Environmental Science Pub Date : 2019-12-30 DOI: 10.15578/squalen.v14i3.400
N. D. Fajarningsih, Naomi Intaqta, D. Praseptiangga, C. Anam
Extraction and partial characterization of lectin from Indonesian Padina australis and Padina minor had been carried out. The crude extract of the P. australis and P. minor were examined for hemagglutination activity (HA) using native and trypsin-treated of rabbit and human A, B, O type erythrocytes. Both extracts agglutinated all of the trypsin-treated erythrocytes tested in the HA assay. Strong HA was detected in the crude extract of P. minor with trypsin-treated of human type A and O erythrocytes. However, the sugar-binding specificity study through the quantitative hemagglutination inhibition (HI) assay showed that P. minor extract could not specifically recognize the glycans tested. Apparently, the HA of the P. minor was more due to its co-extracted polyphenols content than its lectin content. On the other hand, the HI assay showed that asialo transferrin human (aTf) and asialo porcine thyroglobulin (aPTG) were the most powerful in inhibiting the HA of P. australis. Those indicated that P. australis protein extract was able to specifically recognized aTf and aPTG. The stability of P. australis and P. minor HA over various temperatures, pH ranges, and divalent cations studies showed that the P. minor HA was stable on a wide range of pH and temperature; not affected by the presence of EDTA, but decreased by Ca2+ and Mg2+ additions showed that P. minor protein extract  was not a metallic protein. The HA of P. australis decreased at 60 oC and was inactivated at 90 oC; increased at strong acidic (pH 3 & 4) and strong basic (pH 9 & 10) and dependent by the presence of either EDTA or Ca2+ and Mg2+ divalent cation.
对印尼巴丁纳和小巴丁纳凝集素进行了提取和部分鉴定。用天然和胰蛋白酶处理过的兔、人A、B、O型红细胞,检测了南花和小花粗提物的血凝活性(HA)。两种提取物都能凝集所有经胰蛋白酶处理的红细胞。用胰蛋白酶处理过的人A型和O型红细胞,可检测到强血凝素。然而,通过定量血凝抑制(HI)试验进行的糖结合特异性研究表明,小檗提取物不能特异性识别所测聚糖。显然,小檗的HA主要来自于其共提取的多酚含量,而不是其凝集素含量。另一方面,HI实验表明,亚洲猪转铁蛋白(aTf)和亚洲猪甲状腺球蛋白(aPTG)对澳大利亚猪血凝素的抑制作用最强。结果表明,南芥蛋白提取物能够特异性识别aTf和aPTG。研究结果表明,南青花和小青花HA在不同温度、pH范围和二价阳离子条件下的稳定性表明,小青花HA在较宽的pH和温度范围内是稳定的;不受EDTA存在的影响,但Ca2+和Mg2+的添加降低了蛋白质的含量,表明小p蛋白提取物不是金属蛋白。60℃时,南稻的HA降低,90℃时HA灭活;在强酸(pH 3和4)和强碱(pH 9和10)下增加,并依赖于EDTA或Ca2+和Mg2+二价阳离子的存在。
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引用次数: 1
Potency of Catfish (Clarias sp.) Protein Hydrolysates as Candidates Matrices for Microbiology Reference Material 鲶鱼(Clarias sp.)蛋白水解物作为微生物参考材料候选基质的效价研究
Q3 Environmental Science Pub Date : 2019-12-30 DOI: 10.15578/squalen.v14i3.404
E. Kurniawati, B. Ibrahim, Desniar Desniar
Fish protein hydrolysate (FPH) is a derivative product of fish proteins containing smaller peptides and amino acids. FPH products have high water solubility, good emulsion capacity, and large expanding ability. With its functional properties, it allows FPH to be used as a raw material in the manufacturing of secondary microbiological reference materials. This study was intended to characterize catfish (Clarias sp.) FPH as a candidate for the matrix of microbial secondary reference. The FPH was prepared through enzymatic hydrolysis, freeze-drying and milling. The hydrolysis processes were carried out using 5% (w/w) papain, 55 °C for 5 hours, then the papain activity was stopped by increasing the temperature to 80 °C for 20 minutes.The FPH was combined with gelatine, sodium glutamate, glucose solution, and was spiked with Salmonella enteritica sv Enteritidis and freeze-dried. Results showed that catfish FPH was yellowish-white powder with a FPH yield of 11.05%. The proximate analysis of FPH revealed the moisture content of 3.77 ± 0.12%, ash content of 7.26 ± 0.03%, protein content of 86.09 ± 0.17%, and fat content of 1.38 ± 0.07%. The protein content of the FPH was greater than skim milk (33.42%). Carbohydrate levels of catfish FPH and skim milk were 1.56% and 57.46%, respectively. The best concentration of catfish FPH to perform as a microbiological reference material was 14%, obtained from highest viability of Salmonella bacteria and homogeny. The candidate for reference material were stable at storage temperatures of -20 oC.
鱼蛋白水解物(FPH)是一种含有较小肽和氨基酸的鱼蛋白衍生物。FPH产品水溶性高,乳化能力好,膨胀能力大。由于其功能特性,它允许FPH用作制造二级微生物标准物质的原料。本研究旨在对鲶鱼(Clarias sp.) FPH作为微生物二级参比基质的候选物进行表征。通过酶解、冷冻干燥、磨粉制备FPH。用5% (w/w)的木瓜蛋白酶,55℃水解5小时,80℃加热20分钟停止木瓜蛋白酶活性。将FPH与明胶、谷氨酸钠、葡萄糖溶液混合,加入肠炎沙门氏菌(sv)冷冻干燥。结果表明,鲶鱼FPH为黄白色粉末,FPH产率为11.05%。FPH含量为3.77±0.12%,灰分含量为7.26±0.03%,蛋白质含量为86.09±0.17%,脂肪含量为1.38±0.07%。蛋白含量高于脱脂奶(33.42%)。鲶鱼FPH和脱脂奶的碳水化合物含量分别为1.56%和57.46%。在沙门氏菌最高活力和均质性条件下,鲶鱼FPH的最佳浓度为14%。候选标准物质在-20℃的储存温度下是稳定的。
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引用次数: 2
Preface Squalen Bulletin Vol. 14 No. 3 Tahun 2019 《角鲨通报》第14卷第3期2019
Q3 Environmental Science Pub Date : 2019-12-28 DOI: 10.15578/squalen.v14i3.422
Squalen Bulletin
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引用次数: 0
Squalen Bulletin of Marine and Fisheries Postharvest and Biotechnology 海洋与渔业捕后与生物技术角鲨公报
Q3 Environmental Science Pub Date : 2019-12-28 DOI: 10.15578/squalen.v14i3.420
Squalen Bulletin
The most rapidly expanding areas for seaweed production in the world are the tropics, including Indonesia, yet these areas are also where molecular identification of local marine flora has only been sporadically employed. Furthermore, a goal for the Government of Indonesia is to diversify the types of seaweed that are being utilized, targeting valuable products and, hand in hand, to develop aquaculture techniques for these species. Morphological methods for species identification in algae are complex or unreliable, due to simple morphologies and plasticity. Therefore, it is crucial that the correct identification is made for species and varieties of commercial interest so that growth and biochemical results can be compared and contrasted between locations, across environments and over time without taxonomic ambiguity. This guide presents entry level methodologies for sample collection, DNA preservation, DNA extraction, PCR, and analyses of DNA sequence data, as a first step in the genetic characterization of both well-known cultivated species and identification of different species with potential economic properties.
世界上海藻生产增长最快的地区是热带地区,包括印度尼西亚,但这些地区也是当地海洋植物群的分子鉴定只是零星使用的地区。此外,印度尼西亚政府的一个目标是使正在利用的海藻种类多样化,以有价值的产品为目标,同时为这些品种开发水产养殖技术。由于形态简单且具有可塑性,藻类物种鉴定的形态学方法复杂或不可靠。因此,对具有商业价值的物种和品种进行正确的鉴定是至关重要的,这样就可以在不同的地点、不同的环境和不同的时间对生长和生化结果进行比较和对比,而不会产生分类上的歧义。本指南介绍了样品收集、DNA保存、DNA提取、PCR和DNA序列数据分析的入门级方法,作为对已知栽培物种和具有潜在经济特性的不同物种进行遗传表征的第一步。
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引用次数: 6
Preface Squalen Bulletin Vol. 14 No. 2 Tahun 2019 《角鲨通报》第14卷第2期2019
Q3 Environmental Science Pub Date : 2019-08-31 DOI: 10.15578/squalen.v14i2.403
Squalen Bulletin
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引用次数: 0
Storage Stability of Fish Waste Peptone at Ambient Temperature 鱼废蛋白胨在常温下的贮存稳定性
Q3 Environmental Science Pub Date : 2019-08-30 DOI: 10.15578/SQUALEN.V14I2.383
A. Poernomo, F. Ariyani, M. Murdinah
Peptones from fish waste has been widely studied, however information about its shelf life is stilllimited. This study aims to test the storability of dried peptone from tuna and shrimp waste produced through hydrolysis using alcalase enzyme. Peptone powders were packed in HDPE plastic bottles and plastic coated aluminum foil, stored at room temperature, and periodically observed in quality (moisture content, aw, color and appearance). A test was also performed on their ability to support the growth of Staphylococcus aureusbacteria; all were compared to commercial peptone (Difco). Shrimp waste peptone had the highest moisture, ash calcium contents, while tuna peptone has the highest fat content. During five month storage at ambient temperature, all peptones experienced a slight decrease in quality. Aluminum foil performed better than HDPE bottles as a packaging material for peptones, i.e., able to maintain the moisture content, water activity, and appearance. Although the ability to support bacterial growth after five months of storage was slightly affected, the tested peptones were still able to beused as bacterial growing media. It can be concluded that fish waste peptones had comparable quality and shelf-life atambient temperature to commercial peptone.
鱼类粪便中的蛋白胨已被广泛研究,但有关其保质期的信息仍然有限。本研究的目的是测试用alcalase酶水解金枪鱼和虾的排泄物所产生的干蛋白胨的可储存性。蛋白胨粉末包装在HDPE塑料瓶和塑料包覆铝箔中,室温保存,定期观察质量(含水量,aw,颜色和外观)。还对它们支持金黄色葡萄球菌生长的能力进行了测试;与商业蛋白胨(Difco)进行比较。虾渣蛋白胨水分、灰分、钙含量最高,金枪鱼蛋白胨脂肪含量最高。在环境温度下储存5个月,所有蛋白胨的质量都略有下降。铝箔作为蛋白胨的包装材料比HDPE瓶表现更好,即,能够保持水分含量,水活性和外观。虽然在储存5个月后支持细菌生长的能力受到轻微影响,但测试的蛋白胨仍然可以用作细菌生长的培养基。由此可见,鱼废蛋白胨与商品蛋白胨在常温下具有相当的质量和保质期。
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引用次数: 0
Screening of Antibacterial and Antioxidant Activity from the Soft Corals Sinularia sp. and Sarcophyton sp. Origin Palu Bay, Central Sulawesi, Indonesia 产自印度尼西亚苏拉威西岛中部帕卢湾的Sinularia sp.和Sarcophyton sp.软珊瑚抗菌和抗氧化活性的筛选
Q3 Environmental Science Pub Date : 2019-08-30 DOI: 10.15578/SQUALEN.V14I2.394
W. A. Tanod, D. Dewanto, S. Ndobe, P. H. Riyadi, M. Putra
This study aimed to evaluate the potential antibacterial and antioxidant activities of Sinulariasp. and Sarcophyton sp. from the Palu Bay, Central Sulawesi, Indonesia. Soft corals were identified as Sinulariasp. (SC1), Sinularia sp. (SC2), andSarcophytonsp. (SC3). Antibacterial activity was examined using agar diffusion well method. Antioxidant activity was measured by the DPPH radical scavenging method. The samples were macerated in MeOH: DCM. The crude extracts were partitioned with DCM, EtOAc, and BuOH. The crude extract of Sinulariasp. (SC2) showed a very strong antibacterial activity as it was able to inhibit the growth of Staphylococcus aureusand Escherichia coliup to 10 mg/mL. Sinularia sp. (SC1) crude extract showed strong activity againstS. aureus, whereas it showed moderate against E. coli.Sarcophyton sp. (SC3) crude extract showed moderate activity against S. aureus, whereas it showed weak against E. coli. The partition fractions of the three soft coral extracts had the potential to be a potent antioxidant agent.
本研究旨在评价紫苏蒿潜在的抗菌和抗氧化活性。和来自印度尼西亚苏拉威西岛中部帕卢湾的石藻。软珊瑚鉴定为Sinulariasp。(SC1)、Sinularia sp. (SC2)和sarcophytonsp .。(SC3)。用琼脂扩散孔法测定其抑菌活性。采用DPPH自由基清除法测定其抗氧化活性。样品在MeOH: DCM中浸泡。粗提物分别用DCM、EtOAc和BuOH进行分割。菝葜粗提物。(SC2)对金黄色葡萄球菌和大肠杆菌的抑菌活性高达10 mg/mL,具有很强的抑菌活性。Sinularia sp. (SC1)粗提物具有较强的抗虫活性。而对大肠杆菌表现温和。Sarcophyton sp. (SC3)粗提物对金黄色葡萄球菌的活性中等,对大肠杆菌的活性较弱。这三种软珊瑚提取物的分割部分有可能成为一种有效的抗氧化剂。
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引用次数: 8
Front Cover Squalen Bulletin Vol. 14 No. 2 Tahun 2019 《角鲨通讯》第14卷第2期封面2019
Q3 Environmental Science Pub Date : 2019-08-30 DOI: 10.15578/squalen.v14i2.401
Squalen Bulletin
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引用次数: 0
期刊
Squalen Bulletin of Marine and Fisheries Postharvest and Biotechnology
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