Pub Date : 2024-07-01Epub Date: 2024-05-21DOI: 10.1016/j.tree.2024.03.005
Aoife Leonard, Antton Alberdi
The Earth Hologenome Initiative (EHI) is a global collaboration to generate and analyse hologenomic data from wild animals and associated microorganisms using standardised methodologies underpinned by open and inclusive research principles. Initially focused on vertebrates, it aims to re-examine ecological and evolutionary questions by studying host-microbiota interactions from a systemic perspective.
{"title":"A global initiative for ecological and evolutionary hologenomics.","authors":"Aoife Leonard, Antton Alberdi","doi":"10.1016/j.tree.2024.03.005","DOIUrl":"10.1016/j.tree.2024.03.005","url":null,"abstract":"<p><p>The Earth Hologenome Initiative (EHI) is a global collaboration to generate and analyse hologenomic data from wild animals and associated microorganisms using standardised methodologies underpinned by open and inclusive research principles. Initially focused on vertebrates, it aims to re-examine ecological and evolutionary questions by studying host-microbiota interactions from a systemic perspective.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"616-620"},"PeriodicalIF":16.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141081519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01Epub Date: 2024-05-06DOI: 10.1016/j.tree.2024.04.008
Eamonn I F Wooster, Dale G Nimmo
{"title":"Functional trait databases for macrobehaviour.","authors":"Eamonn I F Wooster, Dale G Nimmo","doi":"10.1016/j.tree.2024.04.008","DOIUrl":"10.1016/j.tree.2024.04.008","url":null,"abstract":"","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"605-606"},"PeriodicalIF":16.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140877407","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01Epub Date: 2024-03-19DOI: 10.1016/j.tree.2024.02.004
J T Stroud, B M Delory, E M Barnes, J M Chase, L De Meester, J Dieskau, T N Grainger, F W Halliday, P Kardol, T M Knight, E Ladouceur, C J Little, C Roscher, J M Sarneel, V M Temperton, T L H van Steijn, C M Werner, C W Wood, T Fukami
Although primarily studied through the lens of community ecology, phenomena consistent with priority effects appear to be widespread across many different scenarios spanning a broad range of spatial, temporal, and biological scales. However, communication between these research fields is inconsistent and has resulted in a fragmented co-citation landscape, likely due to the diversity of terms used to refer to priority effects across these fields. We review these related terms, and the biological contexts in which they are used, to facilitate greater cross-disciplinary cohesion in research on priority effects. In breaking down these semantic barriers, we aim to provide a framework to better understand the conditions and mechanisms of priority effects, and their consequences across spatial and temporal scales.
{"title":"Priority effects transcend scales and disciplines in biology.","authors":"J T Stroud, B M Delory, E M Barnes, J M Chase, L De Meester, J Dieskau, T N Grainger, F W Halliday, P Kardol, T M Knight, E Ladouceur, C J Little, C Roscher, J M Sarneel, V M Temperton, T L H van Steijn, C M Werner, C W Wood, T Fukami","doi":"10.1016/j.tree.2024.02.004","DOIUrl":"10.1016/j.tree.2024.02.004","url":null,"abstract":"<p><p>Although primarily studied through the lens of community ecology, phenomena consistent with priority effects appear to be widespread across many different scenarios spanning a broad range of spatial, temporal, and biological scales. However, communication between these research fields is inconsistent and has resulted in a fragmented co-citation landscape, likely due to the diversity of terms used to refer to priority effects across these fields. We review these related terms, and the biological contexts in which they are used, to facilitate greater cross-disciplinary cohesion in research on priority effects. In breaking down these semantic barriers, we aim to provide a framework to better understand the conditions and mechanisms of priority effects, and their consequences across spatial and temporal scales.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"677-688"},"PeriodicalIF":16.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176627","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01Epub Date: 2024-03-19DOI: 10.1016/j.tree.2024.02.008
Shaopeng Wang, Pubin Hong, Peter B Adler, Eric Allan, Yann Hautier, Bernhard Schmid, Jurg W Spaak, Yanhao Feng
The global biodiversity crisis has stimulated decades of research on three themes: species coexistence, biodiversity-ecosystem functioning relationships (BEF), and biodiversity-ecosystem functional stability relationships (BEFS). However, studies on these themes are largely independent, creating barriers to an integrative understanding of the causes and consequences of biodiversity. Here we review recent progress towards mechanistic integration of coexistence, BEF, and BEFS. Mechanisms underlying the three themes can be linked in various ways, potentially creating either positive or negative relationships between them. That said, we generally expect positive associations between coexistence and BEF, and between BEF and BEFS. Our synthesis represents an initial step towards integrating causes and consequences of biodiversity; future developments should include more mechanistic approaches and broader ecological contexts.
{"title":"Towards mechanistic integration of the causes and consequences of biodiversity.","authors":"Shaopeng Wang, Pubin Hong, Peter B Adler, Eric Allan, Yann Hautier, Bernhard Schmid, Jurg W Spaak, Yanhao Feng","doi":"10.1016/j.tree.2024.02.008","DOIUrl":"10.1016/j.tree.2024.02.008","url":null,"abstract":"<p><p>The global biodiversity crisis has stimulated decades of research on three themes: species coexistence, biodiversity-ecosystem functioning relationships (BEF), and biodiversity-ecosystem functional stability relationships (BEFS). However, studies on these themes are largely independent, creating barriers to an integrative understanding of the causes and consequences of biodiversity. Here we review recent progress towards mechanistic integration of coexistence, BEF, and BEFS. Mechanisms underlying the three themes can be linked in various ways, potentially creating either positive or negative relationships between them. That said, we generally expect positive associations between coexistence and BEF, and between BEF and BEFS. Our synthesis represents an initial step towards integrating causes and consequences of biodiversity; future developments should include more mechanistic approaches and broader ecological contexts.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"689-700"},"PeriodicalIF":16.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-01Epub Date: 2024-02-23DOI: 10.1016/j.tree.2024.01.007
Elena Velado-Alonso, David Kleijn, Ignasi Bartomeus
Integrating biodiversity conservation into agriculture is a pressing challenge promoted by conservationists. Although biodiversity can also provide important benefits to farmers, the adoption of biodiversity-enhancing measures is lagging behind the scientific evidence. This may partially be related to the way scientists position themselves. If scientists do not convincingly communicate about the implications of their evidence, other interested stakeholders will drive the conversations. To increase societal impact, scientists must understand the complex communication environment and take an informed and strategic position. We describe the prevailing conservation and farming narratives, highlighting how the term 'biodiversity' can be used to start dialogues between parties with conflicting demands and exemplifying how scientists can build effective narratives.
{"title":"Reassessing science communication for effective farmland biodiversity conservation.","authors":"Elena Velado-Alonso, David Kleijn, Ignasi Bartomeus","doi":"10.1016/j.tree.2024.01.007","DOIUrl":"10.1016/j.tree.2024.01.007","url":null,"abstract":"<p><p>Integrating biodiversity conservation into agriculture is a pressing challenge promoted by conservationists. Although biodiversity can also provide important benefits to farmers, the adoption of biodiversity-enhancing measures is lagging behind the scientific evidence. This may partially be related to the way scientists position themselves. If scientists do not convincingly communicate about the implications of their evidence, other interested stakeholders will drive the conversations. To increase societal impact, scientists must understand the complex communication environment and take an informed and strategic position. We describe the prevailing conservation and farming narratives, highlighting how the term 'biodiversity' can be used to start dialogues between parties with conflicting demands and exemplifying how scientists can build effective narratives.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"537-547"},"PeriodicalIF":16.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139940859","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-01Epub Date: 2024-03-19DOI: 10.1016/j.tree.2024.01.012
Corey T Callaghan, Luca Santini, Rebecca Spake, Diana E Bowler
Measuring and tracking biodiversity from local to global scales is challenging due to its multifaceted nature and the range of metrics used to describe spatial and temporal patterns. Abundance can be used to describe how a population changes across space and time, but it can be measured in different ways, with consequences for the interpretation and communication of spatiotemporal patterns. We differentiate between relative and absolute abundance, and discuss the advantages and disadvantages of each for biodiversity monitoring, conservation, and ecological research. We highlight when absolute abundance can be advantageous and should be prioritized in biodiversity monitoring and research, and conclude by providing avenues for future research directions to better assess the necessity of absolute abundance in biodiversity monitoring.
{"title":"Population abundance estimates in conservation and biodiversity research.","authors":"Corey T Callaghan, Luca Santini, Rebecca Spake, Diana E Bowler","doi":"10.1016/j.tree.2024.01.012","DOIUrl":"10.1016/j.tree.2024.01.012","url":null,"abstract":"<p><p>Measuring and tracking biodiversity from local to global scales is challenging due to its multifaceted nature and the range of metrics used to describe spatial and temporal patterns. Abundance can be used to describe how a population changes across space and time, but it can be measured in different ways, with consequences for the interpretation and communication of spatiotemporal patterns. We differentiate between relative and absolute abundance, and discuss the advantages and disadvantages of each for biodiversity monitoring, conservation, and ecological research. We highlight when absolute abundance can be advantageous and should be prioritized in biodiversity monitoring and research, and conclude by providing avenues for future research directions to better assess the necessity of absolute abundance in biodiversity monitoring.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"515-523"},"PeriodicalIF":16.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176626","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-01Epub Date: 2024-01-11DOI: 10.1016/j.tree.2023.11.011
Marilyne Laurans, François Munoz, Tristan Charles-Dominique, Patrick Heuret, Claire Fortunel, Sandrine Isnard, Sylvie-Annabel Sabatier, Yves Caraglio, Cyrille Violle
Trait-based ecology has improved our understanding of the functioning of organisms, communities, ecosystems, and beyond. However, its predictive ability remains limited as long as phenotypic integration and temporal dynamics are not considered. We highlight how the morphogenetic processes that shape the 3D development of a plant during its lifetime affect its performance. We show that the diversity of architectural traits allows us to go beyond organ-level traits in capturing the temporal and spatial dimensions of ecological niches and informing community assembly processes. Overall, we argue that consideration of multilevel topological, geometrical, and ontogenetic features provides a dynamic view of the whole-plant phenotype and a relevant framework for investigating phenotypic integration, plant adaptation and performance, and community structure and dynamics.
{"title":"Why incorporate plant architecture into trait-based ecology?","authors":"Marilyne Laurans, François Munoz, Tristan Charles-Dominique, Patrick Heuret, Claire Fortunel, Sandrine Isnard, Sylvie-Annabel Sabatier, Yves Caraglio, Cyrille Violle","doi":"10.1016/j.tree.2023.11.011","DOIUrl":"10.1016/j.tree.2023.11.011","url":null,"abstract":"<p><p>Trait-based ecology has improved our understanding of the functioning of organisms, communities, ecosystems, and beyond. However, its predictive ability remains limited as long as phenotypic integration and temporal dynamics are not considered. We highlight how the morphogenetic processes that shape the 3D development of a plant during its lifetime affect its performance. We show that the diversity of architectural traits allows us to go beyond organ-level traits in capturing the temporal and spatial dimensions of ecological niches and informing community assembly processes. Overall, we argue that consideration of multilevel topological, geometrical, and ontogenetic features provides a dynamic view of the whole-plant phenotype and a relevant framework for investigating phenotypic integration, plant adaptation and performance, and community structure and dynamics.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"524-536"},"PeriodicalIF":16.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139425600","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-01Epub Date: 2024-05-21DOI: 10.1016/j.tree.2024.03.007
Dorrit Inbar, Yonatan M Kupchik, Danny Ben-Zvi, Yossi Yovel, Irit Sadeh
Scientific meetings rarely involve the local community and have minimal educational and scientific impacts on it. Here, we report the successful engagement of high-school students in scientific conferences. To promote science education and trust in science, we call upon conference attendees and organizers to involve high-school students in their meetings.
{"title":"Engaging high-school students in scientific conferences.","authors":"Dorrit Inbar, Yonatan M Kupchik, Danny Ben-Zvi, Yossi Yovel, Irit Sadeh","doi":"10.1016/j.tree.2024.03.007","DOIUrl":"10.1016/j.tree.2024.03.007","url":null,"abstract":"<p><p>Scientific meetings rarely involve the local community and have minimal educational and scientific impacts on it. Here, we report the successful engagement of high-school students in scientific conferences. To promote science education and trust in science, we call upon conference attendees and organizers to involve high-school students in their meetings.</p>","PeriodicalId":23274,"journal":{"name":"Trends in ecology & evolution","volume":" ","pages":"507-509"},"PeriodicalIF":16.8,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141081521","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}