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N-glycan remodeling by α-D-mannosidase and β-D-N-acetylhexosaminidase regulates fruit softening, redox balance, and post-harvest pathogen resistance α- d -甘露糖苷酶和β- d - n -乙酰己糖苷酶对n -聚糖的重塑调节果实软化、氧化还原平衡和收获后的病原菌抗性。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-14 DOI: 10.1111/tpj.70629
Mohammad Irfan, Pankaj Kumar, Vinay Kumar, Irshad Ahmad, Sekhu Ansari, Sumit Ghosh, Asis Datta

Post-harvest loss of fruits and vegetables poses significant challenges to food security and economic sustainability, primarily due to ripening-associated excessive softening that shortens shelf life and increases susceptibility to pathogens. N-glycans, N-glycoproteins, and their processing enzymes are integral to various plant processes, including fruit ripening. Among these, α-D-mannosidase (α-Man) and β-D-N-acetylhexosaminidase (β-Hex) are key ripening-specific enzymes that modulate fruit softening. Previously, we have shown that RNAi-mediated suppression of α-Man or β-Hex improves fruit shelf life and firmness in both climacteric and non-climacteric fruits. However, the underlying molecular and biochemical basis of fruit softening regulation by α-Man and β-Hex was not well understood. In this study, we developed transgenic tomato (Solanum lycopersicum) plants by silencing α-Man and β-Hex simultaneously using RNAi. Suppression of these enzymes reduces N-glycoprotein degradation, downregulates pectin dissolution, and inhibits ripening-related gene expression. RNAi fruits exhibited enhanced shelf life, greater firmness, reduced reactive oxygen species (ROS) accumulation and increased resistance against post-harvest pathogens without affecting plant growth, fruit development, yield, or nutritional quality. To further explore the molecular mechanism of α-Man and β-Hex function, we purified and quantified N-glycans in RNAi fruits and other ripening-impaired mutants, identifying key N-glycan species. We also carried out iTRAQ-based quantitative proteome profiling to investigate the abundance of proteins in ripened fruit affected by silencing of α-Man and β-Hex. Molecular insights revealed that N-glycan processing and degradation are key events during ripening, influencing cell wall softening, fruit redox state, and post-harvest quality attributes. This study highlights the potential of co-silencing α-Man and β-Hex as a novel approach to extending the shelf life of fruits, regardless of their climacteric behavior, without compromising quality or yield.

水果和蔬菜收获后的损失对粮食安全和经济可持续性构成重大挑战,主要原因是与成熟相关的过度软化缩短了保质期,增加了对病原体的易感性。n -聚糖、n -糖蛋白及其加工酶是包括果实成熟在内的各种植物过程的组成部分。其中,α- d -甘露糖苷酶(α-Man)和β- d - n -乙酰己糖苷酶(β-Hex)是调控果实软化的关键成熟特异性酶。在此之前,我们已经证明rnai介导的α-Man或β-Hex抑制可以改善更年期和非更年期水果的保质期和硬度。然而,α-Man和β-Hex调控果实软化的分子生化基础尚不清楚。在本研究中,我们利用RNAi同时沉默α-Man和β-Hex,建立了转基因番茄(Solanum lycopersicum)植株。抑制这些酶可减少n -糖蛋白降解,下调果胶溶解,抑制成熟相关基因表达。RNAi处理的果实表现出更长的保质期、更强的硬度、更少的活性氧(ROS)积累和对收获后病原体的抵抗力增强,而不影响植物生长、果实发育、产量或营养品质。为了进一步探索α-Man和β-Hex功能的分子机制,我们纯化并定量了RNAi果实和其他成熟受损突变体中的n -聚糖,鉴定了关键的n -聚糖种类。我们还利用itraq进行了定量蛋白质组分析,以研究α-Man和β-Hex沉默对成熟果实中蛋白质丰度的影响。分子分析表明,n -聚糖的加工和降解是成熟过程中的关键事件,影响细胞壁软化、果实氧化还原状态和收获后的品质属性。这项研究强调了α-Man和β-Hex共沉默的潜力,这是一种延长水果保质期的新方法,无论它们的更年期行为如何,都不会影响质量或产量。
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引用次数: 0
Comparative genomic analysis of Artemisia argyi reveals asymmetric expansion of terpene synthases and conservation of artemisinin biosynthesis 比较基因组分析揭示了青蒿萜类合成酶的不对称扩增和青蒿素生物合成的保守性。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-14 DOI: 10.1111/tpj.70548
Xinlian Chen, Baosheng Liao, Duan Wu, Chunyu Li, Zhengping Li, Zhihai Huang, Lixin Duan, Qi Shen

Artemisia argyi, a perennial herb of the Asteraceae family, possesses significant therapeutic and economic value. We present a 7.88 Gb chromosome-level haplotype-resolved genome assembly, revealing its unique evolutionary trajectory. The karyotype (2n = 34) of A. argyi is that of an autotetraploid, which underwent gametic chromosome fusion prior to species-specific whole-genome duplication (WGD-3). The genome exhibits pronounced multivalent chromosome pairing and frequent recombination among homologous groups. Asymmetrical evolution following WGD-3 is a hallmark feature, evidenced by imbalanced allelic gene loss and widespread neofunctionalization. The terpene synthase (TPS) gene family exemplifies this pattern, having expanded through four duplication events in A. argyi. Recent tandem duplications and allelic functional differentiation have generated substantial gene functional diversity. Notably, we identified a tandem-duplicated six-copy ADS homolog (AarADS)—a key TPS gene in the artemisinin biosynthetic pathway of Artemisia annua (AanADS)—localized exclusively to a single chromosome in A. argyi. Unlike AanADS, which converts farnesyl pyrophosphate (FPP) to amorpha-4,11-diene, AarADS catalyzes FPP to α-bisabolol. Evolutionary analysis suggested that AanADS acquired its specialized function via a derived mutation in the A. annua lineage. This study elucidates the genomic evolution underpinning A. argyi's distinctive medicinal properties.

艾草是菊科多年生草本植物,具有重要的治疗和经济价值。我们提出了一个7.88 Gb染色体水平的单倍型解决基因组组装,揭示了其独特的进化轨迹。银叶艾属同源四倍体,其核型(2n = 34)在物种特异性全基因组复制(WGD-3)之前经历了配子染色体融合。基因组表现出明显的多价染色体配对和同源群之间频繁的重组。WGD-3之后的不对称进化是一个标志性特征,不平衡的等位基因丢失和广泛的新功能化证明了这一点。萜烯合成酶(TPS)基因家族就是这种模式的例证,它通过四次复制事件在艾叶中扩展。最近的串联重复和等位基因功能分化产生了大量的基因功能多样性。值得注意的是,我们发现了一个串联重复的6拷贝ADS同源物(AarADS),这是青蒿素生物合成途径中关键的TPS基因(AanADS),它只定位在艾叶的一条染色体上。与AanADS将法尼基焦磷酸(FPP)转化为无定形-4,11-二烯不同,AarADS催化FPP转化为α-双abolol。进化分析表明,AanADS通过在黄花蚕豆谱系中的衍生突变获得了其特殊功能。本研究阐明了艾叶独特药用特性的基因组进化基础。
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引用次数: 0
Bundle sheath cell-specific expression of chloroplast genes encoding subunits of the NADH dehydrogenase-like complex in maize 玉米NADH脱氢酶样复合体亚基叶绿体基因的束鞘细胞特异性表达。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-14 DOI: 10.1111/tpj.70602
Haruna Yano, Yuya Fukuta, Yoshiki Nihsimura, Toshiharu Shikanai

C4 photosynthesis alleviates the limitation caused by the oxygenase activity of Rubisco by partitioning photosynthetic functions between two distinct cell types: bundle sheath cells (BSCs) and mesophyll cells (MCs). These cell types perform different steps of photosynthesis using specialized machinery, accompanied by differential expression of chloroplast genes. To uncover the underlying molecular mechanisms for this differentiation, we isolated BSCs and MCs and compared their chloroplast transcriptomes, focusing on the chloroplast NADH dehydrogenase-like (NDH) complex, which is enriched in BSCs. To investigate whether RNA stabilization contributes to differential gene expression, we analyzed RNA footprints that reflect the binding of pentatricopeptide repeat (PPR) proteins to their RNA targets. We could not detect cell-type-specific accumulation of footprint RNAs. We then focused on transcriptional regulation, specifically on an operon that starts with the rps15 gene. The operon includes six ndh genes and the psaC gene encoding a photosystem I subunit. Transcript levels of all genes in this operon were higher in BSCs than in MCs, suggesting coordinated regulation as a transcriptional unit. Based on the genomic location of the rps15 gene within inverted repeats near the junctions on both sides of the small single copy region, we demonstrated that rps15, through two distinct promoters, is sufficient to drive preferential accumulation of downstream transcripts in BSCs.

C4光合作用通过在束鞘细胞(BSCs)和叶肉细胞(MCs)两种不同的细胞类型之间分配光合作用功能,减轻了Rubisco加氧酶活性的限制。这些细胞类型使用专门的机械完成光合作用的不同步骤,伴随着叶绿体基因的差异表达。为了揭示这种分化的潜在分子机制,我们分离了BSCs和MCs,并比较了它们的叶绿体转录组,重点研究了BSCs中富集的叶绿体NADH脱氢酶样(NDH)复合物。为了研究RNA稳定是否有助于差异基因表达,我们分析了反映五肽重复(PPR)蛋白与其RNA靶标结合的RNA足迹。我们无法检测到细胞类型特异性的足迹rna积累。然后我们专注于转录调控,特别是以rps15基因开始的操纵子。操纵子包括6个ndh基因和编码光系统I亚基的psaC基因。BSCs中该操纵子所有基因的转录水平均高于MCs,表明其作为一个转录单位进行协调调控。基于rps15基因在小单拷贝区两侧连接附近的倒置重复序列中的基因组位置,我们证明了rps15通过两个不同的启动子足以驱动BSCs中下游转录物的优先积累。
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引用次数: 0
Histone H3K4 demethyltransferase VvJMJ14 promotes H2O2 inducing fruit ripening in grape 组蛋白H3K4去甲基转移酶VvJMJ14促进H2O2诱导葡萄果实成熟
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-13 DOI: 10.1111/tpj.70642
Ding-Ding Zuo, Lu Yang, Rui-Ya Li, Jia-Lin Xing, Jing Zhang, Kai-Yue Zhang, Hai-Nan Liu, Mao-Song Pei, Tong-Lu Wei, Da-Long Guo

Fruit ripening is regulated by a complex regulatory network, including internal factors and epigenetic modification. Until now, the role of histone methylation in grape fruit ripening is unclear, especially for H3K4me3 modification. H2O2 treatment promotes the ripening of grape berries, but how it regulates fruit ripening and whether it affects H3K4me3 modification is poorly understood. Here, to study the relationship between H2O2 and H3K4me3 modification in fruit ripening, a comprehensive analysis of anti-H3K4me3 ChIP-seq and RNA-seq of grape berries after H2O2 treatment was performed. The results revealed that H2O2 treatment led to changes in expression patterns and H3K4me3 modification in heat shock protein 18.2 (VvHSP18.2), ethylene-responsive transcription factor 75 (VvERF75), and E3 ubiquitin-protein ligase PUB23 (VvPUB23). Overexpression of VvHSP18.2 promoted grape fruit ripening. Among them, VvHSP18.2 positively regulates grape fruit ripening. The potential histone H3K4 demethyltransferase (lysine-specific demethylase JMJ14) with reduced expression after H2O2 treatment was further identified. VvJMJ14 is located in the cytoplasm and negatively regulates grape fruit ripening. VvJMJ14 does not directly interact with VvHSP18.2, VvERF75, and VvPUB23, but promotes their transcription by affecting the H3K4me3 levels in their promoter region after H2O2 treatment. Overall, these results demonstrate that VvJMJ14 is a H3K4 demethyltransferase that promotes the expression of VvHSP18.2, VvERF75, and VvPUB23 by regulating H3K4me3 levels, thereby accelerating H2O2-induced fruit ripening in grape. This study provides a reference for the study of H2O2 regulation of fruit ripening at the epigenetic regulation level.

果实成熟受一个复杂的调控网络调控,包括内部因素和表观遗传修饰。到目前为止,组蛋白甲基化在葡萄果实成熟中的作用尚不清楚,特别是H3K4me3修饰。H2O2处理促进葡萄果实成熟,但其如何调控果实成熟以及是否影响H3K4me3修饰尚不清楚。为了研究H2O2与果实成熟过程中H3K4me3修饰的关系,我们对H2O2处理后葡萄果实的anti-H3K4me3 ChIP-seq和RNA-seq进行了综合分析。结果表明,H2O2处理导致热休克蛋白18.2 (VvHSP18.2)、乙烯应答转录因子75 (VvERF75)和E3泛素蛋白连接酶PUB23 (VvPUB23)的表达模式和H3K4me3修饰的改变。过表达vhsp18.2促进葡萄果实成熟。其中,vhsp18.2正调控葡萄果实成熟。进一步鉴定H2O2处理后表达降低的潜在组蛋白H3K4去甲基转移酶(赖氨酸特异性去甲基酶JMJ14)。VvJMJ14位于细胞质中,负向调控葡萄果实成熟。VvJMJ14不直接与VvHSP18.2、VvERF75和VvPUB23相互作用,而是通过H2O2处理后影响其启动子区域的H3K4me3水平来促进其转录。综上所述,这些结果表明,VvJMJ14是一种H3K4去甲基转移酶,通过调节H3K4me3水平促进VvHSP18.2、VvERF75和VvPUB23的表达,从而加速h2o2诱导的葡萄果实成熟。本研究为在表观遗传调控水平上研究H2O2对果实成熟的调控提供了参考。
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引用次数: 0
Genes involved in small peptide biosynthesis are implicated in water stress responses of grapevine 参与小肽生物合成的基因与葡萄的水分胁迫反应有关
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-13 DOI: 10.1111/tpj.70641
Rochelle Schlank, David W. Jeffery, Catherine M. Kidman, Vinay Pagay

The hypothesis that small peptides in the CLAVATA3/EMBRYO SURROUNDING REGION-RELATED (CLE) family are responsible for stomatal regulation under soil drying was tested in grapevine (Vitis vinifera L.). Potted Cabernet Sauvignon grapevines were subjected to water stress by withholding irrigation over a 10-day period followed by 6 days of holding stress and 10 days of recovery. Soil drying resulted in declines in leaf (ΨL) and stem (ΨS) water potentials and root and leaf hydraulic conductances. Near-complete stomatal closure occurred within 10 days of withholding water. Extending the duration of dry soil over an additional week had no additional effect on stomatal conductance (gs), but decreased ΨL and ΨS. Xylem sap abscisic acid (ABA) increased during peak water stress and declined during extended stress. Transcripts of CLE1, CLE3 and CLE6 followed the same patterns as ABA and its transcript NCED1, increasing as the soil dried and decreasing upon soil rehydration. Gene expression of CLE9 increased in both roots and leaves in response to soil drying, but, in contrast to the other CLE peptides, it remained high in the roots even after the vines recovered from water stress. The results indicate that CLE9 may be a key root-to-shoot signal of soil drying in grapevine. Together with the putative regulation of leaf ABA by CLE peptides, stomatal regulation is suggested to be indirectly controlled by root and leaf CLE9 under soil drying. An overall model of hydraulic and chemical signalling in grapevine under water stress that incorporates the role of CLE peptides is proposed.

以葡萄(Vitis vinifera L.)为研究对象,验证了CLAVATA3/EMBRYO SURROUNDING regional related (CLE)家族中的小肽参与土壤干燥条件下气孔调节的假说。盆栽赤霞珠(Cabernet Sauvignon)葡萄进行了为期10天的水胁迫,随后进行了6天的水胁迫和10天的恢复。土壤干燥导致叶片(ΨL)和茎(ΨS)水势以及根和叶的水力导度下降。截水后10天内气孔接近完全关闭。土壤干燥时间延长一周对气孔导度(gs)没有额外影响,但降低了ΨL和ΨS。木质部汁液脱落酸(ABA)在峰值水分胁迫期间升高,在延长胁迫期间下降。CLE1、CLE3和CLE6的转录本与ABA及其转录本NCED1的表达规律相同,随着土壤干燥而增加,随着土壤水化而减少。土壤干燥后,CLE9基因在根和叶中的表达均有所增加,但与其他CLE肽不同的是,即使藤蔓从水分胁迫中恢复过来,CLE9基因在根中的表达仍保持较高水平。结果表明,CLE9可能是葡萄根系对土壤干燥的关键信号。结合推测的CLE肽对叶片ABA的调控,认为土壤干燥条件下,根系和叶片的CLE9间接调控气孔发育。在水分胁迫下,葡萄藤的水力和化学信号的整体模型,包括CLE肽的作用提出。
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引用次数: 0
SWI/SNF chromatin remodeling factor BRAHMA promotes de novo shoot regeneration by epigenetic priming via H3K27me3 removal SWI/SNF染色质重塑因子BRAHMA通过去除H3K27me3,通过表观遗传启动促进新生芽再生。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-13 DOI: 10.1111/tpj.70630
Ayaka Horie, Hikaru Sato, Takuya Sakamoto, Yayoi Inui, Mariana Diaz, Yutaka Suzuki, Sachihiro Matsunaga

Plants have a remarkable capacity for regeneration. Recent studies have identified associations between plant regeneration and epigenetic regulators, thereby supporting the hypothesis that dynamic gene expression changes occur during the regeneration process. Notably, the association with chromatin remodeling factors remains to be elucidated. In this study, we demonstrated that BRAHMA (BRM), a core ATPase of the BRM-associated SWI/SNF (BAS) chromatin remodeling complex, plays a crucial role in the shoot regeneration process via root-derived callus formation. Phenotypic and transcriptomic analyses demonstrated that BRM exerts a substantial effect on the transition of gene expression from callus formation to shoot regeneration. Furthermore, epigenomic analysis revealed that BRM contributes to the removal of the silencing mark H3K27me3 indirectly from shoot regeneration-related genes during callus formation, suggesting cooperative functions with plant-specific H3K27me3 demethylases. The transcriptional activation of shoot regeneration-related genes from which H3K27me3 was removed during callus formation did not occur until shoot induction. This suggests that BRM is involved in epigenetic priming, which puts shoot regeneration-related genes in a primed state that allows gene expression immediately after shoot induction. We identified 24 BRM-mediated epigenetic priming targets, which are not expressed during callus formation but are rapidly transcribed after shoot induction. Furthermore, out of these targets, the transcription factor NGATHA 3 (NGA3) and the glycine-rich protein DEFECTIVELY ORGANIZED TRIBUTARIES 1 (DOT1), are involved in the shoot regeneration process through epigenetic priming.

植物具有非凡的再生能力。最近的研究已经确定了植物再生与表观遗传调控因子之间的联系,从而支持了在再生过程中发生动态基因表达变化的假设。值得注意的是,与染色质重塑因子的关系仍有待阐明。在这项研究中,我们发现brma (BRM)是BRM相关的SWI/SNF (BAS)染色质重塑复合体的核心atp酶,在通过根源愈伤组织形成的茎再生过程中起着至关重要的作用。表型和转录组学分析表明,BRM对愈伤组织形成到茎再生的基因表达转变具有实质性影响。此外,表观基因组分析显示,BRM在愈伤组织形成过程中间接地从茎再生相关基因中去除沉默标记H3K27me3,这表明BRM与植物特异性H3K27me3去甲基化酶具有协同作用。在愈伤组织形成过程中去除H3K27me3的茎再生相关基因的转录激活直到茎诱导才发生。这表明BRM参与了表观遗传启动,使茎再生相关基因处于启动状态,使基因在茎诱导后立即表达。我们发现了24个brm介导的表观遗传启动靶点,这些靶点在愈伤组织形成过程中不表达,但在茎诱导后迅速转录。此外,在这些靶标中,转录因子NGATHA 3 (NGA3)和富含甘氨酸的蛋白质缺陷组织支流1 (DOT1)通过表观遗传启动参与了茎再生过程。
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引用次数: 0
Editorial—Announcement of the 2025 TPJ fellows 社论- 2025年TPJ研究员公告。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-11 DOI: 10.1111/tpj.70643
Katherine Denby, Zhongchi Lui, Jörg Bohlmann, Alisdair R. Fernie

We are delighted to announce the recipients of the 2025 TPJ Fellowship awards are Mustafa Bulut and Yajun Wang.

Mustafa is a Research Group Leader at the MetaCom Program Center of the Leibniz Institute of Plant Biochemistry (IPB), Germany, where he leads the group Biochemical Genetics of Metabolic Plasticity. His research focuses on understanding how plants evolve metabolic diversity to withstand environmental challenges, with the broader aim of improving crop resilience, nutritional quality, and climate-smart agriculture. By integrating metabolomics, functional genomics, and evolutionary biology, his group investigates the genetic and biochemical basis of metabolic adaptations across diverse environments and species.

Congratulations to them both. We sincerely welcome Mustafa and Yajun to The Plant Journal team and look forward to supporting the advance of their already impressive scientific careers.

我们很高兴地宣布,2025年TPJ奖学金的获得者是Mustafa Bulut和王亚军。Mustafa是德国莱布尼茨植物生物化学研究所(IPB) MetaCom项目中心的研究小组组长,在那里他领导了代谢可塑性的生化遗传学小组。他的研究重点是了解植物如何进化代谢多样性以抵御环境挑战,其更广泛的目标是提高作物的适应力、营养质量和气候智能型农业。通过整合代谢组学、功能基因组学和进化生物学,他的团队研究了不同环境和物种的代谢适应的遗传和生化基础。恭喜他们俩。我们真诚地欢迎Mustafa和Yajun加入Plant Journal团队,并期待着支持他们已经令人印象深刻的科学事业的发展。
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引用次数: 0
The Lotus japonicus alpha-expansin EXPA1 is recruited during intracellular and intercellular rhizobial colonization 荷花α -扩张蛋白EXPA1在细胞内和细胞间的根瘤菌定植过程中被募集。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-11 DOI: 10.1111/tpj.70639
Jesús Montiel, Ivette García-Soto, Elizabeth Monroy-Morales, Beatrice Lace, Mariana Robledo-Gamboa, Mads Vestergaard, Niels Sandal, Thomas Ott, Jens Stougaard

Most legumes establish a mutualistic association with rhizobia, a group of nitrogen-fixing bacteria. In Lotus japonicus, the symbiotic colonization occurs intracellularly, via root hair infection threads by Mesorhizobium loti, or intercellularly, with Agrobacterium pusense IRBG74. In both mechanisms, cell wall remodeling is presumably an essential process. In plants, α-expansins (EXPA) promote cell wall loosening by non-enzymatically triggering a pH-dependent relaxation. In this study, we show that LjEXPA1 is critical for the intracellular and intercellular symbiotic program in L. japonicus. Promoter activity and subcellular localization analyses revealed that EXPA1 is recruited at essential compartments and structures of epidermal and cortical cells in both mechanisms of rhizobial infection, such as the infection chambers, infection pockets, and transcellular infection threads. Additionally, EXPA1-YFP abundantly accumulated in dividing cortical cells during nodule formation. The expression profile of EXPA1 correlates with the symbiotic phenotype observed in homozygous mutants disrupted in the EXPA1 gene (expA1-1 and expA1-2). Infection thread formation and intercellular colonization were drastically reduced in expA1-1 and expA1-2 mutants, compared with wild-type plants. Similarly, nodule formation was significantly reduced in these mutants after M. loti or IRBG74 inoculation. Our results indicate that non-enzymatic cell wall remodeling by the α-expansin EXPA1 is crucial for the successful establishment of Lotus–rhizobia symbiosis, regardless of the infection mechanism.

大多数豆科植物与根瘤菌(一组固氮细菌)建立了共生关系。在日本莲中,共生定植发生在细胞内,通过根毛侵染线,由loti中根瘤菌,或与pusense农杆菌IRBG74细胞间。在这两种机制中,细胞壁重塑可能是一个必要的过程。在植物中,α-扩张素(EXPA)通过非酶促ph依赖性松弛来促进细胞壁松动。在这项研究中,我们发现LjEXPA1在日本扁桃胞内和胞间共生程序中起着关键作用。启动子活性和亚细胞定位分析表明,EXPA1在根瘤菌感染的两种机制(如感染室、感染袋和跨细胞感染线)中被募集到表皮和皮质细胞的基本区室和结构中。此外,在结节形成过程中,EXPA1-YFP在皮质细胞分裂中大量积累。在EXPA1基因断裂的纯合突变体(EXPA1 -1和EXPA1 -2)中,EXPA1的表达谱与共生表型相关。与野生型相比,expA1-1和expA1-2突变体的侵染线形成和细胞间定植明显减少。同样,接种M. loti或IRBG74后,这些突变体的结节形成显著减少。我们的研究结果表明,无论感染机制如何,α-扩张蛋白EXPA1的非酶细胞壁重塑对莲藕-根瘤菌共生的成功建立至关重要。
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引用次数: 0
The OsMPK9–OsCDR1 module regulates abiotic stress responses in rice OsMPK9-OsCDR1模块调节水稻的非生物胁迫响应。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-10 DOI: 10.1111/tpj.70627
Haitao Wang, Shijie Chen, Wenjie Zhu, Ranran Zhao, Enhe Wang, Xuanlin Gao, Wenzhu Jiang, Tao Wu, Xinglin Du

Rice (Oryza sativa L.), originating from tropical and subtropical regions, is a cold-sensitive and water-demanding crop whose yield and quality are severely compromised by chilling injury or water deficits during growth and development. In this study, we systematically characterized Cold and Drought Resistance 1 (OsCDR1), a nucleus-localized transcription activator belonging to the bZIP transcription factor family. OsCDR1 overexpression enhances rice tolerance to cold and drought stress, whereas knockout mutants of OsCDR1 exhibit reduced resistance to low temperatures and drought conditions. Furthermore, OsCDR1 positively regulates abscisic acid (ABA) signaling in rice, and mediates ABA-regulated drought tolerance responses in rice. Integrated RNA-seq and CUT&Tag analyses demonstrated that OsCDR1 coordinates with ABA-dependent (PIP2;2) and -independent genes (DREB1J). OsCDR1 specifically binds to the G-box cis-element in the promoters of PIP2;2 and DREB1J, thereby activating their transcription and regulating the abiotic stress responses in rice. Protein interaction analysis revealed that OsCDR1 interacts with the kinase OsMPK9 in vivo and in vitro, and a dual-luciferase reporter assay showed that OsMPK9 and OsCDR1 regulate the transcription of DREB1J and PIP2;2 in the same functional pathway. Overexpression of OsMPK9 inhibits ABA responses in rice and reduces cold and drought tolerance. Our findings establish the OsMPK9–OsCDR1 module as a critical hub connecting ABA signaling to abiotic stress resilience, providing new insights for breeding crops.

水稻(Oryza sativa L.)原产于热带和亚热带地区,是一种对冷敏感和需水的作物,在生长发育过程中,冷害或缺水严重影响其产量和品质。在这项研究中,我们系统地鉴定了一个核定位的转录激活子OsCDR1 (Cold and Drought Resistance 1,简称OsCDR1),它属于bZIP转录因子家族。OsCDR1过表达增强了水稻对寒冷和干旱胁迫的耐受性,而OsCDR1基因敲除突变体对低温和干旱条件的抗性降低。此外,OsCDR1正调控水稻脱落酸(ABA)信号,介导ABA调控的水稻抗旱反应。综合RNA-seq和CUT&Tag分析表明,OsCDR1与aba依赖基因(PIP2;2)和aba独立基因(DREB1J)协调。OsCDR1特异性结合PIP2启动子中的G-box顺式元件;2和DREB1J,从而激活它们的转录,调节水稻的非生物胁迫反应。蛋白相互作用分析显示,在体内和体外,OsCDR1与激酶OsMPK9相互作用,双荧光素酶报告基因实验显示,OsMPK9和OsCDR1调节DREB1J和PIP2的转录;2在相同的功能途径。OsMPK9的过表达抑制了水稻对ABA的反应,降低了水稻的耐旱性和耐寒性。我们的研究结果表明,OsMPK9-OsCDR1模块是连接ABA信号与非生物胁迫抗性的关键枢纽,为作物育种提供了新的见解。
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引用次数: 0
The SCOOP12-MIK2 module regulates Arabidopsis root meristem development via the PLETHORA transcription factors SCOOP12-MIK2模块通过过多的转录因子调控拟南芥根分生组织的发育。
IF 5.7 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-09 DOI: 10.1111/tpj.70633
Meng Chen, Xian Wang, Kai Pan, Mengjuan Kong, Ji She, Zhong Zhao, Shutang Tan

Plants have evolved intricate mechanisms to balance growth and defense through complex signaling networks. Previous studies have focused on aerial parts or crop yield, but little is known about the regulation of root growth under pathogen attack. Here, we report that the SERINE RICH ENDOGENOUS PEPTIDE12 (SCOOP12) immune signaling peptide regulates root meristem development via the receptor-like kinase MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 (MIK2) and the MAPK cascade in Arabidopsis. We demonstrated that SCOOP12 treatment reduced the number of root meristematic cells by suppressing the expression of key molecular regulators, including PLETHORA1 (PLT1) and PLT2, which are essential for maintaining root stem cell niche (SCN) activity. Physiological and cell biological experiments revealed that MIK2 and MPK6 are required for SCOOP12-mediated root growth regulation, as the mik2 and mpk6 mutants presented reduced sensitivity to SCOOP12-induced effects. Further biochemical evidence indicates that MPK6 directly phosphorylates PLT1 and PLT2. The plt1-4 plt2-2 double mutant also presented diminished responses to SCOOP12, confirming the central role of PLT1/2 in this regulatory network. Our work elucidated a molecular pathway through which SCOOP12 modulates root meristem activity, providing insights into the trade-off between plant growth and immunity.

植物已经进化出复杂的机制,通过复杂的信号网络来平衡生长和防御。以往的研究主要集中在地上部分或作物产量上,但对病原菌侵染下根系生长的调控知之甚少。在这里,我们报道了富含丝氨酸的内源性肽12 (SCOOP12)免疫信号肽通过受体样激酶MALE DISCOVERER 1-相互作用受体样激酶2 (MIK2)和MAPK级联调节根分生组织的发育。我们证明,SCOOP12处理通过抑制关键分子调控因子的表达来减少根分生细胞的数量,包括PLETHORA1 (PLT1)和PLT2,这是维持根干细胞生态位(SCN)活性所必需的。生理学和细胞生物学实验表明,由于MIK2和MPK6突变体对scoop12诱导的影响敏感性降低,因此MIK2和MPK6是scoop12介导的根生长调节所必需的。进一步的生化证据表明MPK6直接磷酸化PLT1和PLT2。plt1-4 - plt2-2双突变体对SCOOP12的反应也减弱,证实了PLT1/2在该调控网络中的核心作用。我们的工作阐明了SCOOP12调节根分生组织活性的分子途径,为植物生长和免疫之间的权衡提供了见解。
{"title":"The SCOOP12-MIK2 module regulates Arabidopsis root meristem development via the PLETHORA transcription factors","authors":"Meng Chen,&nbsp;Xian Wang,&nbsp;Kai Pan,&nbsp;Mengjuan Kong,&nbsp;Ji She,&nbsp;Zhong Zhao,&nbsp;Shutang Tan","doi":"10.1111/tpj.70633","DOIUrl":"10.1111/tpj.70633","url":null,"abstract":"<div>\u0000 \u0000 <p>Plants have evolved intricate mechanisms to balance growth and defense through complex signaling networks. Previous studies have focused on aerial parts or crop yield, but little is known about the regulation of root growth under pathogen attack. Here, we report that the SERINE RICH ENDOGENOUS PEPTIDE12 (SCOOP12) immune signaling peptide regulates root meristem development via the receptor-like kinase MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 (MIK2) and the MAPK cascade in <i>Arabidopsis</i>. We demonstrated that SCOOP12 treatment reduced the number of root meristematic cells by suppressing the expression of key molecular regulators, including PLETHORA1 (PLT1) and PLT2, which are essential for maintaining root stem cell niche (SCN) activity. Physiological and cell biological experiments revealed that MIK2 and MPK6 are required for SCOOP12-mediated root growth regulation, as the <i>mik2</i> and <i>mpk6</i> mutants presented reduced sensitivity to SCOOP12-induced effects. Further biochemical evidence indicates that MPK6 directly phosphorylates PLT1 and PLT2. The <i>plt1-4 plt2-2</i> double mutant also presented diminished responses to SCOOP12, confirming the central role of PLT1/2 in this regulatory network. Our work elucidated a molecular pathway through which SCOOP12 modulates root meristem activity, providing insights into the trade-off between plant growth and immunity.</p>\u0000 </div>","PeriodicalId":233,"journal":{"name":"The Plant Journal","volume":"124 5","pages":""},"PeriodicalIF":5.7,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145712953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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The Plant Journal
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