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Corrigendum to ‘Characterization and antibody preparation of the gene products of grouper iridovirus ORF120L’ [Virus Research 360 (2025) 199625] “石斑鱼虹膜病毒ORF120L基因产物的鉴定和抗体制备”[病毒研究360(2025)199625]的勘误表。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-11 DOI: 10.1016/j.virusres.2025.199628
Chu-Fan Cheng , Hsiang-Chieh Chuang , Yu-Shen Lai
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引用次数: 0
Spillover of SARS-CoV-2 to domestic dogs in COVID-19–positive households: A one health surveillance study covid -19阳性家庭中SARS-CoV-2对家狗的溢出:一项健康监测研究
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-05 DOI: 10.1016/j.virusres.2025.199629
Santhamani Ramasamy , Felipe Bustamante , Lindsey C. LaBella , Stephen D. Cole , Jay Armstrong , David L. Thompson , John M. Hardham , Suresh V. Kuchipudi , Deepanker Tewari
The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) is capable of infecting multiple species through human-to-animal spillover. Human to animal spillovers have been documented both in domestic and wild animal species. Due to close contact in shared households, pet dogs may be at increased risk for contracting the SARS-CoV-2 virus from infected individuals in the same household. In this study, we have analyzed serum samples from dogs (n=196) from Pennsylvania during 2021-2022 for the presence of SARS-CoV-2 specific antibodies. The dogs in this analysis included those that were exposed to individuals of the household, who had history of recent SARS-CoV-2 infection, and from dogs with no known history of potential exposure to SARS-CoV-2. Our analysis found a significantly higher seroprevalence (68 %) among the dogs with exposure to SARS-CoV-2 infection from individuals from COVID-19 positive household compared to other dogs. Our study found the overall seroprevalence of 12.24 % among dogs as determined using a surrogate virus neutralization test (sVNT). All sera that were positive by sVNT were also positive by pseudovirus neutralization test (pVNT) except for sera from one dog, likely due to a lower antibody response. The antibody titers using the panel of spike pseudoviruses in pVNT test showed higher titers against the Delta, Gamma and Alpha variants compared to Omicron. We also tested the diagnostic capabilities of a lateral flow assay (LFA) developed by Zoetis by comparing it to sVNT and pVNT. The LFA showed sensitivity and specificity of 85 % compared to sVNT and 75 % compared to the pVNT indicating its potential for field use. These findings provide serological evidence of SARS-CoV-2 spillover to pet dogs and underscore the importance of continued surveillance in companion animals as part of a One Health approach, especially as new viral variants continue to emerge.
严重急性呼吸综合征冠状病毒-2 (SARS-CoV-2)能够通过人-动物外溢感染多个物种。人类对动物的溢出效应在家养动物和野生动物物种中都有记录。由于共享家庭中的密切接触,宠物狗从同一家庭中的感染者那里感染SARS-CoV-2病毒的风险可能会增加。在这项研究中,我们分析了2021-2022年期间宾夕法尼亚州狗(n=196)的血清样本,以确定是否存在SARS-CoV-2特异性抗体。本分析中的狗包括那些接触过最近有SARS-CoV-2感染史的家庭成员的狗,以及没有已知潜在SARS-CoV-2接触史的狗。我们的分析发现,与其他狗相比,暴露于COVID-19阳性家庭个体的SARS-CoV-2感染的狗的血清阳性率显著高于其他狗(68%)。我们的研究发现,使用替代病毒中和试验(sVNT)确定犬的总血清阳性率为12.24%。除了一只狗的血清外,所有sVNT阳性的血清在假病毒中和试验(pVNT)中也呈阳性,可能是由于抗体反应较低。在pVNT测试中使用刺突假病毒面板的抗体滴度显示,与Omicron相比,针对Delta、Gamma和Alpha变体的抗体滴度更高。我们还测试了Zoetis开发的横向流动试验(LFA)的诊断能力,将其与sVNT和pVNT进行比较。与sVNT相比,LFA的敏感性和特异性为85%,与pVNT相比为75%,表明其具有现场应用的潜力。这些发现提供了SARS-CoV-2向宠物狗溢出的血清学证据,并强调了作为“同一个健康”方法的一部分,继续对伴侣动物进行监测的重要性,特别是在新的病毒变体不断出现的情况下。
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引用次数: 0
Immune-mediated bone loss: A Mendelian randomization and NHANES-based study of viral infections and osteoporosis 免疫介导的骨质流失:一项孟德尔随机化和基于nhanes的病毒感染和骨质疏松症研究。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-02 DOI: 10.1016/j.virusres.2025.199627
Li Xiong , Lingting Wang , He Liu , Yufei He , Hong Wang , Fan Bai

Introduction

Osteoporosis is a major risk factor for fractures, yet the contribution of immune responses to its pathogenesis remains poorly understood. This study investigates whether common viral infections, including Epstein–Barr virus (EBV), human herpesvirus 6 (HHV-6), and varicella-zoster virus (VZV), contribute to osteoporosis through immune-mediated pathways.

Methods

We performed two-sample Mendelian randomization (MR) using genome-wide association study (GWAS) summary data and complemented this with observational analyses from the NHANES 2003–2004 cycle. Antibody responses to EBV, HHV-6, and VZV were examined for potential causal effects on bone mineral density (BMD) at key skeletal sites.

Results

MR analyses indicated that stronger antibody responses to EBV, HHV-6, and VZV were associated with reduced BMD, particularly at the lumbar spine and femoral neck (OR = 1.18, 95 % CI: 1.02–1.36, p = 0.040). Subgroup analyses suggested more pronounced reductions among young men with EBV and elderly women with VZV. Sensitivity tests supported the robustness of these findings.

Conclusions

Our findings suggest that common herpesvirus infections may contribute to bone loss via immune-mediated mechanisms, especially in vulnerable subgroups. These results provide epidemiological support for a viral–immune link in osteoporosis and underscore the need for mechanistic and longitudinal studies to clarify underlying pathways and guide future preventive strategies.
骨质疏松症是骨折的主要危险因素,然而免疫反应在其发病机制中的作用仍然知之甚少。本研究探讨了包括eb病毒(EBV)、人类疱疹病毒6 (HHV-6)和水痘带状疱疹病毒(VZV)在内的常见病毒感染是否通过免疫介导的途径导致骨质疏松症。方法:我们使用全基因组关联研究(GWAS)汇总数据进行了两样本孟德尔随机化(MR),并辅以NHANES 2003-2004周期的观察性分析。研究人员检测了EBV、HHV-6和VZV抗体应答对关键骨骼部位骨矿物质密度(BMD)的潜在因果影响。结果:MR分析表明,EBV、HHV-6和VZV抗体反应较强与骨密度降低相关,尤其是腰椎和股骨颈(OR = 1.18,95% CI: 1.02-1.36, p = 0.040)。亚组分析显示,年轻男性EBV患者和老年女性VZV患者的减少更为明显。敏感性测试支持了这些发现的稳健性。结论:我们的研究结果表明,常见的疱疹病毒感染可能通过免疫介导的机制导致骨质流失,特别是在易感亚群中。这些结果为骨质疏松症的病毒免疫联系提供了流行病学支持,并强调了机制和纵向研究的必要性,以阐明潜在的途径并指导未来的预防策略。
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引用次数: 0
Adults with celiac disease exhibit overexpression of endogenous retroviruses, TRIM28, and SETDB1 despite gluten-free diet. 尽管无麸质饮食,患有乳糜泻的成年人表现出内源性逆转录病毒、TRIM28和SETDB1的过表达。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-01 Epub Date: 2025-08-05 DOI: 10.1016/j.virusres.2025.199613
Pier-Angelo Tovo, Angelo Armandi, Mauro Bruno, Gian Paolo Caviglia, Paola Montanari, Demis Pitoni, Cristina Calvi, Simone Frara, Eleonora Dileo, Stefano Gambarino, Ilaria Galliano, Davide Giuseppe Ribaldone, Massimiliano Bergallo

Celiac disease (CeD) is a disorder due to abnormal immune response to gluten protein in individuals with predisposing genotypes. Its origin is not fully understood. Human endogenous retroviruses (HERVs) derive from ancestral infections of germinal cells and represent 8 % of the human DNA. They are mostly inactive, but some can be activated. Their aberrant expressions are associated with inflammatory and immune-mediated diseases. HERV transcription is modulated by TRIM28 and SETDB1, which are also directly implicated in epigenetic processes and modulation of the immune response. We reported HERV overexpressions in CeD children at diagnosis. In the current prospective study, using a PCR real-time Taqman amplification assay, we explored the transcription levels of HERV-H-pol, -HERV-K-pol, and HERV-W-pol, of syncytin 1 (SYN1), SYN2, and HERV-W-env, as well as of TRIM28 and SETDB1 in the whole blood from 51 adults with CeD after years of good compliance with gluten-free diet (GFD) as compared to healthy controls (HC) of similar age. The transcriptional levels of every HERV and of TRIM28/SETDB1 were significantly higher in CeD patients than in HC (constantly with p < 0.0001). Positive correlations were found between the RNA levels of TRIM28 or SETDB1 and HERVs in CeD patients. The upregulation of HERVs, TRIM28, and SETDB1 and their positive correlations are suggestive clues of their contribution to the pathophysiology of CeD and might justify the persistent risk of developing, despite GFD, autoimmune diseases, neuropsychiatric disturbances, and cancers, all disorders characterized by enhanced HERV expressions and epigenetic alterations.

乳糜泻(CeD)是一种疾病,由于异常免疫反应对谷蛋白在个体易感基因型。它的起源还不完全清楚。人类内源性逆转录病毒(herv)源于祖先的生发细胞感染,占人类DNA的8%。它们大多不活跃,但有些可以被激活。它们的异常表达与炎症和免疫介导的疾病有关。HERV转录由TRIM28和SETDB1调控,它们也直接参与表观遗传过程和免疫反应的调节。我们报道了在诊断为CeD的儿童中HERV过表达。在当前的前瞻性研究中,我们使用PCR实时Taqman扩增法,研究了51名成年CeD患者在多年遵循无谷蛋白饮食(GFD)后,与同龄健康对照组(HC)相比,全血中合胞素1 (SYN1)、SYN2和HERV-W-env的HERV-H-pol、-HERV-K-pol和HERV-W-pol以及TRIM28和SETDB1的转录水平。在CeD患者中,所有HERV和TRIM28/SETDB1的转录水平均显著高于HC患者(p < 0.05)
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引用次数: 0
Mutation profiling, evolution analysis, molecular dynamics simulation, and functional characterization of Omicron sub-strains 基因突变谱、进化分析、分子动力学模拟和功能表征。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.virusres.2025.199626
Tian Gong , Xuan Zhang , Haiyan Lin , Jing Li , Jiaqi Tao , Ting Zeng , Xinyi Ren , Zhiting Xie , Xiao Lei , Sufeng Zhang , Chengsheng Zhang
The ongoing mutation and evolution of SARS-CoV-2 have posed a severe threat to global health, and their functional impact remains to be further characterized. Here, we analyzed the selection pressure from 49 Omicron sub-strains at the gene and amino acid levels. We also examined the impact of mutations on the binding affinity between the receptor binding domain (RBD) and angiotensin-Converting Enzyme 2 (ACE2) and evaluated the immune escape ability of RBD responding to the monoclonal antibodies (mAbs) through molecular dynamics simulation on eight representative Omicron sub-variants (B.1.1.529, BA.2, XBB.1.5, BA.2.86, JN.1, KP.2, KP.3, and KP.3.1.1). We identified 12 positive selection mutation sites on the viral S protein, including 11 mutation sites in the N-terminal domain (NTD) and RBD regions. A large number of accumulated mutation sites led to an increase in the receptor binding affinity of B.1.1.529 and BA.2.86. In particular, the “saltatory” evolution of BA.2.86 reached to its maximum binding affinity. The E484K mutation exhibited the highest binding affinity in the BA.2.86 and its descendants. New mutation sites either did not affect the binding affinity (R346T, L455S and F456L) or decrease the affinity (K356T and Q493E), reflecting the fluctuation of total receptor binding force. Mutations and shortened conformational epitopes on RBD may mediate the immune escape in the variants of BA.2.86. Moreover, we revealed that the ABBV-47D11 monoclonal antibody could widely bind to the RBD mutation sites of various mutant strains. Our findings may help understand the evolution of SARS-CoV-2 variants and develop novel strategies against SARS-CoV-2 infection.
SARS-CoV-2的持续突变和进化对全球健康构成了严重威胁,其功能影响有待进一步研究。在基因和氨基酸水平上分析了49个Omicron亚菌株的选择压力。我们还研究了突变对受体结合域(RBD)与血管紧张素转换酶2 (ACE2)结合亲和力的影响,并通过分子动力学模拟8个代表性的Omicron亚变体(B.1.1.529、BA.2、XBB.1.5、BA.2.86、j .1、KP.2、KP.3和KP.3.1.1)评估了RBD对单克隆抗体(mab)的免疫逃逸能力。我们在病毒S蛋白上发现了12个阳性选择突变位点,其中11个突变位点位于n端结构域(NTD)和RBD区域。大量突变位点的积累导致B.1.1.529和BA.2.86的受体结合亲和力增加。特别是BA.2.86的“跳跃式”进化达到了其最大的结合亲和力。E484K突变在BA.2.86及其后代中表现出最高的结合亲和力。新的突变位点要么不影响结合亲和力(R346T、L455S和F456L),要么降低亲和力(K356T和Q493E),反映了总受体结合力的波动。RBD上的突变和缩短的构象表位可能介导BA.2.86变异体的免疫逃逸。此外,我们发现ABBV-47D11单克隆抗体可以广泛结合各种突变株的RBD突变位点。我们的发现可能有助于了解SARS-CoV-2变异的演变,并制定对抗SARS-CoV-2感染的新策略。
{"title":"Mutation profiling, evolution analysis, molecular dynamics simulation, and functional characterization of Omicron sub-strains","authors":"Tian Gong ,&nbsp;Xuan Zhang ,&nbsp;Haiyan Lin ,&nbsp;Jing Li ,&nbsp;Jiaqi Tao ,&nbsp;Ting Zeng ,&nbsp;Xinyi Ren ,&nbsp;Zhiting Xie ,&nbsp;Xiao Lei ,&nbsp;Sufeng Zhang ,&nbsp;Chengsheng Zhang","doi":"10.1016/j.virusres.2025.199626","DOIUrl":"10.1016/j.virusres.2025.199626","url":null,"abstract":"<div><div>The ongoing mutation and evolution of SARS-CoV-2 have posed a severe threat to global health, and their functional impact remains to be further characterized. Here, we analyzed the selection pressure from 49 Omicron sub-strains at the gene and amino acid levels. We also examined the impact of mutations on the binding affinity between the receptor binding domain (RBD) and angiotensin-Converting Enzyme 2 (ACE2) and evaluated the immune escape ability of RBD responding to the monoclonal antibodies (mAbs) through molecular dynamics simulation on eight representative Omicron sub-variants (B.1.1.529, BA.2, XBB.1.5, BA.2.86, JN.1, KP.2, KP.3, and KP.3.1.1). We identified 12 positive selection mutation sites on the viral S protein, including 11 mutation sites in the N-terminal domain (NTD) and RBD regions. A large number of accumulated mutation sites led to an increase in the receptor binding affinity of B.1.1.529 and BA.2.86. In particular, the “saltatory” evolution of BA.2.86 reached to its maximum binding affinity. The E484K mutation exhibited the highest binding affinity in the BA.2.86 and its descendants. New mutation sites either did not affect the binding affinity (R346T, L455S and F456L) or decrease the affinity (K356T and Q493E), reflecting the fluctuation of total receptor binding force. Mutations and shortened conformational epitopes on RBD may mediate the immune escape in the variants of BA.2.86. Moreover, we revealed that the ABBV-47D11 monoclonal antibody could widely bind to the RBD mutation sites of various mutant strains. Our findings may help understand the evolution of SARS-CoV-2 variants and develop novel strategies against SARS-CoV-2 infection.</div></div>","PeriodicalId":23483,"journal":{"name":"Virus research","volume":"360 ","pages":"Article 199626"},"PeriodicalIF":2.7,"publicationDate":"2025-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144970859","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhanced efficacy of Helicoverpa armigera nucleopolyhedrovirus against Spodoptera litura larvae using zeolite and chitosan nanoparticle formulations. 沸石和壳聚糖纳米颗粒增强棉铃虫核多角体病毒对斜纹夜蛾幼虫的杀伤作用。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-01 Epub Date: 2025-08-05 DOI: 10.1016/j.virusres.2025.199614
Mia Miranti, Iqbal Nur Iskandar, Melanie Melanie, Desak Made Malini, Camelia Panatarani, I Made Joni, Dedat Prismantoro, Febri Doni, Ravindra Chandra Joshi, Wawan Hermawan

Helicoverpa armigera nucleopolyhedrovirus (HearNPV1) shows considerable potential as a sustainable biological control agent against insect pests. Enhancing its efficacy through formulation with appropriate carrier materials is critical for improving pest management strategies. This study evaluated the potential of chitosan and zeolite nanoparticles as delivery vehicles for HearNPV1, assessing their effects on mortality and lethal time in second-instar Spodoptera litura larvae. A single-factor randomized block design with three replications was used. The treatments consisted of HearNPV1 formulated with various concentrations (0.125 % to 0.5 %) of either chitosan or zeolite nanoparticles. Larval mortality and lethal time (LT) were recorded and analyzed using one-way ANOVA, with significant differences further assessed by Duncan's multiple range test (α=0.05). Results showed that formulating HearNPV1 with either chitosan or zeolite nanoparticles significantly increased larval mortality. Notably, even the lowest concentration tested (0.125 %) of both chitosan and zeolite nanoparticles achieved 66.67 % larval mortality within seven days post-infection. However, no significant differences in lethal time were observed among treatments, regardless of nanoparticle type or concentration. Larvae exposed to virus-nanoparticle formulations exhibited lethal times ranging from 3.0 to 4.67 days on average-similar to the duration observed in larvae infected with HearNPV1 alone. In conclusion, both chitosan and zeolite nanoparticles at 0.125 % concentrations effectively enhanced HearNPV1-induced mortality in S. litura larvae, although they did not shorten the time to death. These findings underscore the potential for nanoparticle-based HearNPV1 formulations to improve biological pest control, warranting further investigation into their practical application and mechanisms of action.

棉铃虫核多角体病毒(helicoppa armigera nuclear polyhedrovirus, HearNPV1)作为一种可持续的害虫生物防治剂具有很大的潜力。通过适当的载体材料来提高其功效,对于改进有害生物管理战略至关重要。本研究评估了壳聚糖和沸石纳米颗粒作为HearNPV1载体的潜力,评估了它们对斜纹夜蛾二龄幼虫的死亡率和致死时间的影响。采用单因素随机区组设计,3个重复。采用不同浓度(0.125% ~ 0.5%)的壳聚糖或沸石纳米颗粒配制HearNPV1。记录幼虫死亡率和致死时间(LT),采用单因素方差分析(单因素方差分析),差异有显著性的采用Duncan’s多重极差检验(α=0.05)。结果表明,壳聚糖或沸石纳米颗粒均可显著提高其幼虫死亡率。值得注意的是,即使是最低浓度(0.125%)的壳聚糖和沸石纳米颗粒也能在感染后7天内达到66.67%的幼虫死亡率。然而,无论纳米颗粒类型或浓度如何,处理之间的致死时间没有显著差异。暴露于病毒纳米颗粒配方的幼虫的致死时间平均为3.0至4.67天,与单独感染HearNPV1的幼虫所观察到的时间相似。综上所述,0.125%浓度的壳聚糖和沸石纳米颗粒均能有效提高hearnpv1诱导的斜纹夜蛾幼虫的死亡率,但并未缩短其死亡时间。这些发现强调了基于纳米颗粒的HearNPV1配方在改善生物害虫防治方面的潜力,需要对其实际应用和作用机制进行进一步研究。
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引用次数: 0
Lesser-known non-apoptotic programmed cell death in viral infections. 病毒感染中鲜为人知的非凋亡程序性细胞死亡。
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-09-01 Epub Date: 2025-08-07 DOI: 10.1016/j.virusres.2025.199612
Jiajun Wu, Xiaohan Qian, Shi Bai, Lijuan Wu, Xian Zhao

Non-apoptotic programmed cell death (NAPCD) represents a diverse set of cell death mechanisms that differ from classical apoptosis and have recently gained attention in the context of viral infections. This review focuses on four key NAPCD types, including ferroptosis, cuproptosis, NETosis (neutrophil extracellular trap formation), and PANoptosis (a combination of pyroptosis, apoptosis, and necroptosis), and summarizes their distinct molecular pathways and roles during viral infections. We emphasize their functional relevance in SARS-CoV-2 infection, revealing how they significantly impact viral replication, host immune responses, and tissue damage. Furthermore, we explore the interaction between NAPCDs and specific immune responses. Specifically, ferroptosis influences macrophage polarization. Cuproptosis activates innate immunity via the cGAS-STING pathway. NETosis contributes to Th17 responses, and PANoptosis interacts with Th1, Th22, and Thαβ pathways. Understanding the interplay among these cell death pathways provides new insights into host-virus dynamics and uncovers potential therapeutic targets for viral diseases.

非凋亡程序性细胞死亡(NAPCD)代表了不同于经典细胞凋亡的多种细胞死亡机制,最近在病毒感染的背景下引起了人们的关注。本文综述了四种主要的NAPCD类型,包括铁下垂、铜下垂、NETosis(中性粒细胞胞外陷阱形成)和PANoptosis(焦亡、凋亡和坏死下垂的结合),并总结了它们在病毒感染中的不同分子途径和作用。我们强调了它们在SARS-CoV-2感染中的功能相关性,揭示了它们如何显著影响病毒复制、宿主免疫反应和组织损伤。此外,我们还探讨了napcd与特异性免疫反应之间的相互作用。具体来说,铁下垂影响巨噬细胞极化。cuprotosis通过cGAS-STING途径激活先天免疫。NETosis参与Th17反应,PANoptosis与Th1、Th22和Thαβ通路相互作用。了解这些细胞死亡途径之间的相互作用提供了对宿主-病毒动力学的新见解,并揭示了病毒性疾病的潜在治疗靶点。
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引用次数: 0
Characterization and antibody preparation of the gene products of grouper iridovirus ORF120L 石斑鱼虹膜病毒ORF120L基因产物的鉴定及抗体制备
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-08-25 DOI: 10.1016/j.virusres.2025.199625
Chu-Fan Cheng , Hsiang-Chieh Chuang , Yu-Shen Lai
Grouper iridovirus (GIV) is regarded as a prominent viral pathogen of grouper, particularly during the larval and juvenile stages. The aim of this study was to comprehensively characterize the GIV-120L gene during viral infection. The results of sequence analysis suggest that GIV-120L is a 1,470 bp gene encoding a Ranavirus-specific viral protein. Recombinant GIV-120L protein was purified using a nickel-affinity column, and its molecular weight was found to be 59.1 kDa. To obtain antibodies against GIV, mice were immunized with recombinant GIV-120L protein, the spleen was harvested 8 weeks later, and hybridoma testing was performed using Sp2/0 myeloma cells. Polyclonal and monoclonal antibodies against GIV-120L were obtained. To characterize GIV-120L gene expression, grouper kidney (GK) cells were infected with GIV using cycloheximide (CHX) and cytosine arabinoside (AraC). GIV-120L transcripts and protein were found at 12–30 h post infection (hpi) and 18–30 hpi, respectively. In addition, inhibition with CHX and AraC confirmed that GIV-120L was a late gene. Immunofluorescence staining using the antibodies produced in the study confirmed that GIV-120L protein is expressed at viral assembly sites at 24 hpi. The findings of this study provide functional characterization of the GIV-120L viral gene, enhance understanding of GIV assembly, and offer insights for GIV diagnostic applications.
石斑鱼虹膜病毒(Grouper iridovirus, GIV)被认为是石斑鱼的主要病毒病原体,特别是在幼虫和幼鱼阶段。本研究的目的是在病毒感染期间全面表征GIV-120L基因。序列分析结果表明,GIV-120L是一个1,470 bp的基因,编码ranvirus特异性病毒蛋白。重组GIV-120L蛋白经镍亲和柱纯化,分子量为59.1 kDa。为了获得抗GIV抗体,用重组GIV- 120l蛋白免疫小鼠,8周后收获脾脏,用Sp2/0骨髓瘤细胞进行杂交瘤检测。获得抗GIV-120L的多克隆和单克隆抗体。用环己亚胺(CHX)和阿拉伯糖胞嘧啶(AraC)感染石斑鱼肾(GK)细胞,检测GIV- 120l基因的表达。在感染后12-30 h (hpi)和18-30 hpi分别发现了GIV-120L转录本和蛋白。此外,CHX和AraC的抑制作用证实了GIV-120L是一个晚期基因。利用本研究产生的抗体进行免疫荧光染色,证实GIV-120L蛋白在24 hpi的病毒组装位点表达。本研究结果提供了GIV- 120l病毒基因的功能表征,增强了对GIV组装的理解,并为GIV诊断应用提供了见解。
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引用次数: 0
Single amino acid substitution at position 614 in SARS-CoV-2 Spike Protein alters viral assembly and infectivity SARS-CoV-2刺突蛋白614位单氨基酸取代改变病毒组装和传染性
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-08-22 DOI: 10.1016/j.virusres.2025.199624
Xiaoshuang Shi , Jiamin Wang , Chang Li , Shouwen Du
The emergence of SARS-CoV-2 has posed a substantial global public - health threat and has led to the emergence of diverse variant strains. A prevalent mutation, D614G, is commonly detected in the spike glycoprotein (S) of successive SARS- CoV-2 variants, which enhances viral infectivity. Here, the objective was to examine the influence of mutations on the synthesis and processing of the S protein, virus assembly, and infectivity. This was achieved by artificially substituting the aspartic acid at position 614 of the S protein with 19 distinct amino acids, including glycine, via codon modification. Pseudoviruses and virus-like particles were employed as models for this investigation. The results demonstrated that the expression characteristics of the modified S proteins diverged from those of the original D614 variant. Moreover, pseudoviruses with various mutations displayed different efficiencies in entering cells expressing ACE2. Significantly, the D614P and D614C mutations disrupted the production and processing of the S protein, exerting a notable impact on virus assembly. However, co-immunoprecipitation analysis indicated that D614 mutations did not hinder the interaction between the S protein and the ACE2 receptor. These findings emphasize the significance of D614 or G614 in S protein expression and virus assembly, providing novel targets and perspectives for the progress of research on spike-based vaccines and antiviral therapeutics.
SARS-CoV-2的出现对全球公共卫生构成了重大威胁,并导致了各种变体菌株的出现。在连续的SARS- CoV-2变体的刺突糖蛋白(S)中通常检测到一种流行的突变D614G,这增强了病毒的传染性。在这里,目的是检查突变对S蛋白合成和加工、病毒组装和感染性的影响。这是通过密码子修饰用19种不同的氨基酸(包括甘氨酸)人工取代S蛋白614位的天冬氨酸来实现的。本研究采用假病毒和病毒样颗粒作为模型。结果表明,修饰后的S蛋白的表达特征与原D614变体不同。此外,不同突变的假病毒在进入表达ACE2的细胞时表现出不同的效率。值得注意的是,D614P和D614C突变破坏了S蛋白的生产和加工,对病毒组装产生了显著影响。然而,共免疫沉淀分析表明,D614突变并未阻碍S蛋白与ACE2受体的相互作用。这些发现强调了D614或G614在S蛋白表达和病毒组装中的重要意义,为基于刺突的疫苗和抗病毒治疗的研究进展提供了新的靶点和视角。
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引用次数: 0
Role of ebv-circRPMS1–p53 interaction in the proliferation and clinical progression of Epstein–Barr virus-associated gastric carcinoma ebv-circRPMS1-p53相互作用在Epstein-Barr病毒相关性胃癌增殖和临床进展中的作用
IF 2.7 4区 医学 Q3 VIROLOGY Pub Date : 2025-08-20 DOI: 10.1016/j.virusres.2025.199617
Ling Yang , Meini Li , Guiming Xie , Xian Wu , Mingxiong Qin , Birong Guo , Jingyue Zhang

Background

Epstein–Barr virus-associated gastric carcinoma (EBVaGC) represents a distinct clinicopathological entity with unique molecular characteristics, including latent EBV infection and dysregulation of host tumor suppressors. However, the functional interplay between EBV circular RNAs (ebv-circRNAs) and p53 protein remains enigmatic. This study explored the role of ebv-circRPMS1, a previously uncharacterized ebv-circRNA, in EBVaGC pathogenesis.

Methods

To define ebv-circRPMS1–p53 interplay, siRNA knockdown (validated by RT-qPCR) modulated ebv-circRPMS1 in EBV+ cells. RIP/co-immunoprecipitation confirmed direct ebv-circRPMS1–p53 binding. EdU assays quantified proliferation. RNA-FISH/immunofluorescence mapped cytoplasmic colocalization. Xenografts evaluated in vivo tumorigenicity, while BaseScope/IHC analyzed tissues. Clinical cohort (n = 70) correlated co-expression with survival via Kaplan–Meier/Cox regression.

Results

This study demonstrated that ebv-circRPMS1 directly binds to p53, thereby enhancing tumor proliferation. Clinically, ebv-circRPMS1–p53 co-expression correlates with poor survival in EBVaGC patients.

Conclusions

These findings unveil a novel viral strategy for subverting host tumor suppression, providing a rationale for targeting the ebv-circRPMS1–p53 axis in precision oncology.
depstein - barr病毒相关性胃癌(EBVaGC)是一种独特的临床病理实体,具有独特的分子特征,包括潜伏的EBV感染和宿主肿瘤抑制因子的失调。然而,EBV环状rna (EBV - circrnas)和p53蛋白之间的功能相互作用仍然是谜。本研究探讨了ebv-circRPMS1在EBVaGC发病机制中的作用,ebv-circRNA是一种以前未被发现的ebv-circRNA。方法为了明确EBV - circrpms1 - p53的相互作用,在EBV+细胞中siRNA敲低(RT-qPCR验证)可调节EBV - circrpms1。RIP/共免疫沉淀证实ebv-circRPMS1-p53直接结合。EdU检测定量增殖。RNA-FISH/免疫荧光图谱细胞质共定位。异种移植物评估体内致瘤性,而BaseScope/IHC分析组织。临床队列(n = 70)通过Kaplan-Meier /Cox回归将共表达与生存率相关。结果本研究证实ebv-circRPMS1直接与p53结合,从而促进肿瘤增殖。临床上,ebv-circRPMS1-p53共表达与EBVaGC患者的低生存率相关。这些发现揭示了一种新的破坏宿主肿瘤抑制的病毒策略,为靶向ebv-circRPMS1-p53轴在精确肿瘤学中的应用提供了理论依据。
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