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Decoding E1-E2 specificity: How UBA6 prioritizes BIRC6 for ubiquitin conjugation 解码E1-E2特异性:UBA6如何优先BIRC6进行泛素偶联
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 DOI: 10.1016/j.chembiol.2026.01.010
Jiajia Wei , Chao Xu
Ubiquitin-conjugating enzyme BIRC6 displays high specificity toward ubiquitin-activating enzyme UBA6. In a study recently published by Nature Structural & Molecular Biology,1 Riechmann et al. unveiled the mechanism underlying UBA6-BIRC6 specificity and its mediated thioester switch, which broadened the understanding of the E1-orchestrated E2 hierarchy.
泛素偶联酶BIRC6对泛素激活酶UBA6具有高特异性。在Nature structure & Molecular Biology最近发表的一项研究中,Riechmann等人揭示了UBA6-BIRC6特异性及其介导的硫酯开关的机制,拓宽了对e1介导的E2层次结构的理解。
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引用次数: 0
Structural and mechanistic analysis of covalent ligands targeting the RNA-binding protein NONO 靶向rna结合蛋白NONO的共价配体的结构与机制分析
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 Epub Date: 2026-01-13 DOI: 10.1016/j.chembiol.2025.12.010
Garrett L. Lindsey , Thomas K. Hockley , Alejandro Villa Gomez , Andrew C. Marshall , William R. Brothers , Colin T. Finney , Jacob Gross , Archa H. Fox , Gene W. Yeo , Bruno Melillo , Charles S. Bond , Benjamin F. Cravatt
RNA-binding proteins (RBPs) play important roles in mRNA transcription, processing, and translation. Chemical tools are lacking for RBPs, which has hindered efforts to perturb and understand RBP function in cells. We previously described a chloroacetamide compound (R)-SKBG-1 that covalently binds the RBP NONO and stabilizes its interactions with mRNAs, leading to transcriptional remodeling and suppression of cancer cell growth. Here, we report the crystal structure of an (R)-SKBG-1:NONO complex, which confirms covalent modification of cysteine-145 at a pocket proximal to the RNA-binding interface of the protein. We show that this pocket can also be targeted by a lower reactivity chlorofluoroacetamide analog (R, R)-GL-373, which retains the pharmacological properties of (R)-SKBG-1, including blockade of estrogen receptor expression in breast cancer cells, while displaying much greater proteome-wide selectivity. Our findings thus show that NONO can be targeted by covalent ligands with high specificity to pharmacologically suppress pro-tumorigenic gene products in cancer cells.
rna结合蛋白(rbp)在mRNA转录、加工和翻译中起着重要作用。目前缺乏用于RBP的化学工具,这阻碍了干扰和理解细胞中RBP功能的努力。我们之前描述了一种氯乙酰胺化合物(R)-SKBG-1,它与RBP NONO共价结合,并稳定其与mrna的相互作用,导致转录重塑和抑制癌细胞生长。在这里,我们报道了一个(R)- skgg -1:NONO复合物的晶体结构,这证实了半胱氨酸-145在靠近rna结合界面的口袋处的共价修饰。我们发现,这种口袋也可以被反应性较低的氯氟乙酰胺类似物(R, R)-GL-373靶向,它保留了(R)-SKBG-1的药理学特性,包括阻断乳腺癌细胞中雌激素受体的表达,同时显示出更大的蛋白质组范围的选择性。因此,我们的研究结果表明,NONO可以通过共价配体以高特异性为靶点,从药理学上抑制癌细胞中的促肿瘤基因产物。
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引用次数: 0
What’s the good word? Lactobacilli produce peptidoglycan fragments with the right structure to induce tolerance during colitis 有什么好消息吗?乳酸菌产生具有正确结构的肽聚糖片段以诱导结肠炎耐受。
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 DOI: 10.1016/j.chembiol.2026.01.012
Joseph P. Dillard
Pattern recognition receptors detect peptidoglycan and trigger inflammatory responses promoting bacterial clearance. So, how do our gut bacteria survive? In this issue of Cell Chemical Biology, Liang et al.1 determine the structures of peptidoglycan fragments released by beneficial bacteria that mediate a NOD2-dependent reduction in inflammatory responses to bacterial products.
模式识别受体检测肽聚糖并触发炎症反应,促进细菌清除。那么,我们的肠道细菌是如何生存的呢?在这一期的《细胞化学生物学》中,Liang等人1确定了有益细菌释放的肽聚糖片段的结构,这些片段介导了对细菌产物的炎症反应中nod2依赖性的减少。
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引用次数: 0
Exporter Mdr1 as an importer is an achilles’ heel for combating drug-resistant Candida 出口商Mdr1作为进口商是打击耐药念珠菌的致命弱点。
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 DOI: 10.1016/j.chembiol.2026.01.009
Jinyao Chen , Ming Zhang , Yeji Wang , Zhiyu Xie , Fei Yang , Hongjun Yu , Di Zhang , Min Fang , Xiaoyi Luan , Xueyang Jin , Xue Wang , Yanan Qiao , Shicun Zheng , Xiuyun Li , Wenqiang Chang , Hongxiang Lou
The overexpression of drug exporters is a well-known mechanism driving antifungal drug resistance. Here, we investigate that converting the exporter to function as a drug importer provides an alternative approach to combat drug resistance. Using high-throughput screening, we identified quaternary ammonium compounds exhibiting hypersensitivity in Candida albicans strains overexpressing MDR1. Further experiments involving CRISPR-Cas9-mediated deletion in C. albicans, heterologous expression of CaMdr1 in Saccharomyces cerevisiae and construction of CaMdr1-containing proteoliposomes confirmed Mdr1 acts as an importer of MKT-077, a potent cyanine derivative highly selective against MDR1-overexpressing strains. By combining computational simulations and the site-directed mutagenesis, critical residues within the transmembrane domains of CaMdr1 involved in MKT-077 import were further identified. Moreover, MKT-077 exhibited therapeutic efficacy in Galleria mellonella infected with Mdr1-overexpressing C. albicans. This work opens an avenue to convert drug resistance into drug sensitivity-a paradigm-shifting strategy in antifungal drug discovery.
药物出口商的过度表达是一种众所周知的驱动抗真菌药物耐药的机制。在这里,我们调查,转换出口商作为一个药物进口商的功能提供了另一种方法来对抗耐药性。通过高通量筛选,我们鉴定出在过表达MDR1的白色念珠菌菌株中表现出超敏反应的季铵盐化合物。进一步的实验包括crispr - cas9介导的白色假丝酵母菌的缺失、酿酒酵母菌CaMdr1的异源表达以及含有CaMdr1的蛋白脂质体的构建,证实了Mdr1作为MKT-077的进口商,MKT-077是一种强效的花青素衍生物,对过表达Mdr1的菌株具有高度选择性。通过计算模拟和定点诱变相结合,进一步确定了CaMdr1跨膜结构域内参与MKT-077导入的关键残基。此外,MKT-077对mdr1过表达的白色念珠菌感染的mellongalleria显示出治疗效果。这项工作为将耐药性转化为药物敏感性开辟了一条途径——这是抗真菌药物发现的一种范式转变策略。
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引用次数: 0
Deciphering phosphorylation TACtics: Advances in phosphorylation targeting strategies and bifunctional modalities 解读磷酸化策略:磷酸化靶向策略和双功能模式的进展
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 Epub Date: 2026-01-12 DOI: 10.1016/j.chembiol.2025.12.012
Dong-Ting Ke , Zilong Zhan , Wenliang Zhang , Zhenyi Hu , Po-Han Chen
Phosphorylation dynamics are delicately balanced by kinases and phosphatases, and abnormal protein phosphorylation events may disrupt normal cellular physiology and thus lead to diseases. Recent developments in phosphorylation targeting tools—mostly the small-molecule kinase inhibitors—have changed the treatments for cancers and other diseases. Alternatively, the use of bifunctional modalities offers another approach through an “event-driven model” with distinct advantages. Here, we highlight advances in bifunctional modalities that modulate protein phosphorylation, including PhosTACs, DEPTACs, PhoRCs, PHICS, and related approaches. Starting with an overview of both kinases and phosphates, we describe recent applications of phosphorylation-targeting therapeutics, with a discussion about the advantages and limitations of current tools, and alternative solutions using bifunctional systems. In addition, the modes of action of various bifunctional modalities and the interplay among protein substrates, kinases, and phosphatases are also discussed, offering an insight into the advancements of phosphorylation targeting strategies against human diseases.
磷酸化动力学是由激酶和磷酸酶微妙地平衡的,异常的蛋白质磷酸化事件可能会破坏正常的细胞生理,从而导致疾病。磷酸化靶向工具的最新进展——主要是小分子激酶抑制剂——已经改变了癌症和其他疾病的治疗方法。另外,双功能模式的使用通过具有明显优势的“事件驱动模型”提供了另一种方法。在这里,我们重点介绍了调节蛋白质磷酸化的双功能模式的进展,包括PhosTACs、deptac、PhoRCs、PHICS和相关方法。从对激酶和磷酸盐的概述开始,我们描述了磷酸化靶向治疗的最新应用,讨论了当前工具的优点和局限性,以及使用双功能系统的替代解决方案。此外,还讨论了各种双功能模式的作用模式以及蛋白质底物,激酶和磷酸酶之间的相互作用,从而深入了解针对人类疾病的磷酸化靶向策略的进展。
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引用次数: 0
The HEAT repeat protein MROH7 regulates the inflammatory macrophage response via LBP acetylation HEAT重复蛋白MROH7通过LBP乙酰化调节炎性巨噬细胞反应
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 Epub Date: 2026-02-03 DOI: 10.1016/j.chembiol.2026.01.002
Hangchao Zhang , Jian Fu , Yan Guo , Shijie Liu , Xuehua Mei , Xiu Zeng , Wenkai Ren
Inflammatory macrophages (M1 macrophages) and interleukin-1β (IL-1β) serve as critical mediators of inflammatory response and antimicrobial defense in the immune system. Our preliminary investigation identified the HEAT repeat protein (maestro heat-like repeat family member 7, MROH7) as a potential regulator of IL-1β; however, its function in macrophages remains unexplored. In this study, we demonstrated that MROH7 inhibits IL-1β production in M1 macrophages. Mechanistically, MROH7 facilitates the acetylation of lipopolysaccharide-binding protein (LBP) through accumulating intracellular arachidonic acid (AA), thereby promoting its degradation and inhibiting the nuclear factor κB (NF-κB) signaling pathway. Additionally, mice with the myeloid depletion of Mroh7 exhibit an aggravated inflammatory response in lipopolysaccharide (LPS)-induced systemic inflammation. In summary, our study establishes MROH7 as a regulator in macrophage-mediated inflammation, providing critical insights into potential therapeutic targets for inflammatory disorders.
炎性巨噬细胞(M1巨噬细胞)和白细胞介素-1β (IL-1β)在免疫系统中作为炎症反应和抗菌防御的重要介质。我们的初步研究发现HEAT重复蛋白(maestro HEAT -like repeat family member 7, MROH7)是IL-1β的潜在调节因子;然而,其在巨噬细胞中的功能尚不清楚。在这项研究中,我们证明了MROH7抑制M1巨噬细胞中IL-1β的产生。在机制上,MROH7通过细胞内花生四烯酸(AA)的积累,促进脂多糖结合蛋白(LBP)的乙酰化,从而促进其降解,抑制核因子κB (NF-κB)信号通路。此外,髓系Mroh7缺失的小鼠在脂多糖(LPS)诱导的全身炎症反应中表现出加重的炎症反应。总之,我们的研究确立了MROH7在巨噬细胞介导的炎症中的调节作用,为炎性疾病的潜在治疗靶点提供了重要的见解。
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引用次数: 0
Discovery of bioactive peptidoglycan fragments from Lactobacillaceae that confer intestinal protection in hosts 乳酸菌科生物活性肽聚糖片段的发现,赋予宿主肠道保护作用
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 Epub Date: 2026-02-09 DOI: 10.1016/j.chembiol.2026.01.005
Yaquan Liang , Christopher Adamson , Chenyu Li , Evan Wei Long Ng , Yujie Li , Yuan Qiao
Gut bacteria-derived peptidoglycan fragments (PGNs) are key signaling molecules in mammalian hosts. However, the production and functional roles of soluble PGNs secreted by individual gut bacterial species have not been systematically explored. Herein, we used a targeted LC-MS/MS approach to profile PGNs released by bacteria, identifying Lactobacillaceae as the predominant producers of disaccharide PGNs in culture supernatants. We then chemically synthesized such disaccharide PGNs and confirmed their activation of the mammalian sensor NOD2. Notably, priming murine macrophages with disaccharide PGNs induced tolerance to subsequent stimulation by TLR2/4 ligands, suggesting that sustained exposure to bioactive PGNs in the gut may shape host immune responses. Consistently, the administration of the disaccharide PGN, GM-AQK, effectively alleviated gut inflammation in a DSS-induced colitis mouse model. Together, these findings deepen our understanding of PGN-mediated gut microbiota-host crosstalk and position natural disaccharide PGNs as promising postbiotic candidates for the therapeutic modulation of intestinal inflammation.
肠道细菌来源的肽聚糖片段(PGNs)是哺乳动物宿主的关键信号分子。然而,肠道细菌分泌的可溶性PGNs的产生和功能作用尚未得到系统的探讨。在此,我们使用靶向LC-MS/MS方法分析细菌释放的PGNs,鉴定乳酸杆菌科是培养上清中双糖PGNs的主要生产者。然后我们化学合成了这些双糖PGNs,并证实了它们对哺乳动物传感器NOD2的激活作用。值得注意的是,用双糖PGNs引发小鼠巨噬细胞诱导对TLR2/4配体随后刺激的耐受性,这表明在肠道中持续暴露于生物活性PGNs可能会影响宿主的免疫反应。一致地,在dss诱导的结肠炎小鼠模型中,给药双糖PGN GM-AQK有效地减轻了肠道炎症。总之,这些发现加深了我们对pgnn介导的肠道微生物-宿主串扰的理解,并将天然双糖pgnn定位为有希望的肠道炎症治疗调节的生物后候选者。
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引用次数: 0
Beyond a degrader: VHL reprograms hypoxic metabolism 超越降解器:VHL重编程缺氧代谢。
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-19 DOI: 10.1016/j.chembiol.2026.01.011
Zhijun He , Peng Jiang
The von Hippel-Lindau (VHL) protein is known for degrading hydroxylated proteins in normoxia, but its role under hypoxia remains unclear. In a recent report in Cell Metabolism Li et al.1 demonstrate that mitochondrial VHL remodels amino acid metabolism under chronic hypoxia to support cell growth, independent of hydroxylated protein degradation.
von Hippel-Lindau (VHL)蛋白在常氧条件下降解羟基化蛋白,但其在缺氧条件下的作用尚不清楚。在Cell Metabolism最近的一篇报道中,Li等人1证明了线粒体VHL在慢性缺氧下重塑氨基酸代谢以支持细胞生长,而不依赖于羟基化蛋白的降解。
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引用次数: 0
Lysosome-targeting chimeras enable targeted protein degradation. 溶酶体靶向嵌合体使靶向蛋白降解成为可能。
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-18 DOI: 10.1016/j.chembiol.2026.01.008
Bozhao Li, Yanyan Li, Jian Zhang, Siren Badama, Xian Zhao, Liping Wang, Tian Zhang, Xueting Wang, Xiaoqing Yi, Guo-Bin Ding, Xudong Wang, Guangjun Nie

Targeted protein degradation (TPD) has emerged as a powerful therapeutic paradigm by enabling the selective elimination of disease-associated proteins beyond the reach of conventional inhibition strategies. Among TPD approaches, lysosome-targeting chimeras (LYTACs) uniquely enable the degradation of extracellular and membrane-associated proteins through receptor-mediated endocytosis and lysosomal delivery. This Review provides a mechanistic and conceptual overview of LYTAC technology, emphasizing molecular classification based on ligand architecture, lysosome-targeting receptor engagement, and endocytic trafficking pathways. We discuss how receptors such as the cation-independent mannose-6-phosphate receptor and asialoglycoprotein receptor dictate internalization efficiency and degradation outcomes, and highlight key biochemical and cellular determinants governing target recognition, intracellular routing, and lysosomal processing. Finally, we examine major translational challenges, including tissue selectivity, pharmacokinetics, immunogenicity, and manufacturing constraints, and outline emerging design strategies such as ligand and linker engineering, modular scaffold optimization, and synthetic receptor recruitment that may enable next-generation LYTAC therapeutics with improved precision and clinical potential.

靶向蛋白降解(Targeted protein degradation, TPD)已经成为一种强大的治疗模式,它能够选择性地消除疾病相关蛋白,而不是传统的抑制策略。在TPD方法中,溶酶体靶向嵌合体(LYTACs)通过受体介导的内吞作用和溶酶体递送独特地实现了细胞外蛋白和膜相关蛋白的降解。这篇综述提供了LYTAC技术的机制和概念概述,强调基于配体结构的分子分类,溶酶体靶向受体的参与,以及内吞运输途径。我们讨论了诸如不依赖阳离子的甘露糖-6-磷酸受体和asialal糖蛋白受体等受体如何决定内化效率和降解结果,并强调了控制靶标识别、细胞内路径和溶酶体处理的关键生化和细胞决定因素。最后,我们研究了主要的翻译挑战,包括组织选择性、药代动力学、免疫原性和制造限制,并概述了新兴的设计策略,如配体和连接体工程、模块化支架优化和合成受体招募,这些策略可能使下一代LYTAC治疗药物具有更高的精度和临床潜力。
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引用次数: 0
Advances in degradomics technologies to assess proteolytic cleavage events 评价蛋白水解裂解事件的降解组学技术进展
IF 8.6 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-02 DOI: 10.1016/j.chembiol.2026.01.001
Alexander R. Ziegler, Nichollas E. Scott, Laura E. Edgington-Mitchell
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引用次数: 0
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Cell Chemical Biology
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