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The interplay between autophagy and unconventional secretion in neurodegeneration 神经退行性变中自噬与非常规分泌的相互作用
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-15 DOI: 10.1016/j.chembiol.2025.12.007
Maurizio Renna , Raffaella Bonavita , Grace Dixon , Luigi Vittorio Verdicchio , Angeleen Fleming
Within neurons, the misfolding and aggregation of certain proteins has been identified as a common feature of many late-onset neurodegenerative diseases (NDs). These aggregate-prone proteins include tau (in both primary tauopathies and in Alzheimer’s disease) and alpha-synuclein in Parkinson’s disease. There is strong experimental evidence that the upregulation of intracellular clearance pathways (autophagy and ubiquitin-proteasome pathways) can clear aggregate-prone proteins in experimental models. When the flux through these pathways is increased, the levels of aggregate-prone proteins are reduced, resulting in improved cell survival in both cell-based and animal models of ND. More recently, a third strategy for clearing proteins from cells has been identified, via the unconventional secretion of proteins out of the cell. However, secretion may also facilitate the spreading and propagation of disease through a prion-like process. This review explains how the autophagy and unconventional secretion pathways interact and how these impact ND.
在神经元内,某些蛋白质的错误折叠和聚集已被确定为许多迟发性神经退行性疾病(NDs)的共同特征。这些易于聚集的蛋白包括tau蛋白(在原发性tau病和阿尔茨海默病中)和帕金森病中的α -突触核蛋白。有强有力的实验证据表明,在实验模型中,上调细胞内清除途径(自噬和泛素-蛋白酶体途径)可以清除易聚集蛋白。当通过这些途径的通量增加时,易于聚集蛋白的水平降低,从而提高了ND细胞和动物模型的细胞存活率。最近,第三种从细胞中清除蛋白质的策略已经被确定,通过非常规的分泌细胞外的蛋白质。然而,分泌物也可能通过类似朊病毒的过程促进疾病的传播和繁殖。本文综述了自噬和非常规分泌途径如何相互作用以及它们如何影响ND。
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引用次数: 0
1-deoxysphingolipids dysregulate membrane properties and cargo trafficking in the early secretory pathway 1-脱氧鞘脂在早期分泌途径中失调膜特性和货物运输
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-15 DOI: 10.1016/j.chembiol.2025.12.006
Yi-Ting Tsai , Nicolas-Frédéric Lipp , Olivia Seidel , Riya Varma , Aurelie Laguerre , Kristina Solorio-Kirpichyan , Adrian M. Wong , Roberto J. Brea , Grace H. McGregor , Thekla Cordes , Neal K. Devaraj , Lars Kuerschner , Sonya Neal , Christian M. Metallo , Itay Budin
1-Deoxysphingolipids are non-canonical sphingolipids linked to several diseases, yet their cellular effects are poorly understood. Here, we utilize lipid chemical biology approaches to investigate the role of 1-deoxysphingolipid metabolism on the properties and functions of secretory membranes. We applied organelle-specific bioorthogonal labeling to visualize the subcellular distribution of metabolically tagged sphingolipids. We observed that 1-deoxysphingolipids are retained in the endoplasmic reticulum (ER) and specifically in ER exit sites (ERESs), suggesting that they do not efficiently sort into vesicular carriers. Cell lines expressing disease-associated variants of serine palmitoyl-CoA transferase accumulated 1-deoxysphingolipids, which were accompanied by a reduction in ER membrane fluidity and enlargement of ERES. We found that the rates of membrane protein release from the ER were altered in response to 1-deoxysphingolipid metabolism in a manner dependent on the protein’s affinity for ordered or disordered membranes. The dysregulation of sphingolipid metabolism can thus alter secretory membrane properties and affect protein trafficking.
1-脱氧鞘脂是非典型鞘脂,与几种疾病有关,但其细胞效应尚不清楚。本文利用脂质化学生物学方法研究1-脱氧鞘脂代谢对分泌膜性质和功能的影响。我们应用细胞器特异性生物正交标记可视化代谢标记鞘脂的亚细胞分布。我们观察到1-脱氧鞘脂保留在内质网(ER)中,特别是内质网出口位点(ERESs),这表明它们不能有效地分选为囊泡载体。表达丝氨酸棕榈酰辅酶a转移酶疾病相关变异的细胞系积累了1-脱氧鞘脂,这伴随着内质网膜流动性的减少和ERES的增大。我们发现,膜蛋白从内质网释放的速率随1-脱氧鞘脂代谢而改变,其方式取决于蛋白质对有序或无序膜的亲和力。鞘脂代谢的失调可以改变分泌膜的特性并影响蛋白质的运输。
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引用次数: 0
Structural and mechanistic analysis of covalent ligands targeting the RNA-binding protein NONO 靶向rna结合蛋白NONO的共价配体的结构与机制分析
IF 8.6 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-13 DOI: 10.1016/j.chembiol.2025.12.010
Garrett L. Lindsey, Thomas K. Hockley, Alejandro Villa Gomez, Andrew C. Marshall, William R. Brothers, Colin T. Finney, Jacob Gross, Archa H. Fox, Gene W. Yeo, Bruno Melillo, Charles S. Bond, Benjamin F. Cravatt
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引用次数: 0
Deciphering phosphorylation TACtics: Advances in phosphorylation targeting strategies and bifunctional modalities 解读磷酸化策略:磷酸化靶向策略和双功能模式的进展
IF 8.6 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-12 DOI: 10.1016/j.chembiol.2025.12.012
Dong-Ting Ke, Zilong Zhan, Wenliang Zhang, Zhenyi Hu, Po-Han Chen
Phosphorylation dynamics are delicately balanced by kinases and phosphatases, and abnormal protein phosphorylation events may disrupt normal cellular physiology and thus lead to diseases. Recent developments in phosphorylation targeting tools—mostly the small-molecule kinase inhibitors—have changed the treatments for cancers and other diseases. Alternatively, the use of bifunctional modalities offers another approach through an “event-driven model” with distinct advantages. Here, we highlight advances in bifunctional modalities that modulate protein phosphorylation, including PhosTACs, DEPTACs, PhoRCs, PHICS, and related approaches. Starting with an overview of both kinases and phosphates, we describe recent applications of phosphorylation-targeting therapeutics, with a discussion about the advantages and limitations of current tools, and alternative solutions using bifunctional systems. In addition, the modes of action of various bifunctional modalities and the interplay among protein substrates, kinases, and phosphatases are also discussed, offering an insight into the advancements of phosphorylation targeting strategies against human diseases.
磷酸化动力学是由激酶和磷酸酶微妙地平衡的,异常的蛋白质磷酸化事件可能会破坏正常的细胞生理,从而导致疾病。磷酸化靶向工具的最新进展——主要是小分子激酶抑制剂——已经改变了癌症和其他疾病的治疗方法。另外,双功能模式的使用通过具有明显优势的“事件驱动模型”提供了另一种方法。在这里,我们重点介绍了调节蛋白质磷酸化的双功能模式的进展,包括PhosTACs、deptac、PhoRCs、PHICS和相关方法。从对激酶和磷酸盐的概述开始,我们描述了磷酸化靶向治疗的最新应用,讨论了当前工具的优点和局限性,以及使用双功能系统的替代解决方案。此外,还讨论了各种双功能模式的作用模式以及蛋白质底物,激酶和磷酸酶之间的相互作用,从而深入了解针对人类疾病的磷酸化靶向策略的进展。
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引用次数: 0
Structural basis for NONO-specific modification by the α-chloroacetamide compound (R)-SKBG-1. α-氯乙酰胺化合物(R)-SKBG-1非特异性修饰的结构基础。
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-09 DOI: 10.1016/j.chembiol.2025.12.013
Alessia Vincenza Florio, Corinne Buré, Sébastien Fribourg

Among the many proteins involved in cancer progression, an increasing number of RNA-binding proteins (RBPs) are central to the function of a cell and tightly associated to genetic diseases. In a recent study, small-molecule inhibitors have been identified as targeting NONO, an RBP known to be involved in mRNA splicing, DNA repair, and membraneless organelle stability. Here, we report the molecular basis of NONO targeting by the α-chloroacetamide molecule (R)-SKBG-1, its specific binding to NONO, and the enantiomer selectivity on the basis of mass spectrometry measurements and structure determination. We have determined the crystal structure of (R)-SKBG-1-bound to NONO homodimer. This study sheds light on the conformational plasticity of (R)-SKBG-1 when covalently bound to NONO. Altogether, these results give an experimental rationale for ligand modification and optimization in a future use as a drug against cancer.

在参与癌症进展的许多蛋白质中,越来越多的rna结合蛋白(rbp)是细胞功能的核心,与遗传疾病密切相关。在最近的一项研究中,小分子抑制剂已被确定为靶向NONO,一种已知参与mRNA剪接,DNA修复和无膜细胞器稳定性的RBP。本文报道了α-氯乙酰胺分子(R)-SKBG-1靶向NONO的分子基础,其与NONO的特异性结合,以及基于质谱测量和结构测定的对映体选择性。我们确定了(R)- skbg -1与NONO同二聚体结合的晶体结构。本研究揭示了(R)-SKBG-1与NONO共价结合时的构象可塑性。总之,这些结果为今后作为抗癌药物使用的配体修饰和优化提供了实验依据。
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引用次数: 0
Redundant or resilient? A systems view of ferroptosis surveillance mechanisms 冗余还是弹性?铁下垂监测机制的系统观点
IF 8.6 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-06 DOI: 10.1016/j.chembiol.2025.11.013
Deguang Liang, Xuejun Jiang
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引用次数: 0
Bugs delivering drugs: Listeria monocytogenes-mediated cytotoxin delivery enhances anti-tumor activity in colorectal cancer 细菌传递药物:单核细胞增生李斯特菌介导的细胞毒素传递增强了结直肠癌的抗肿瘤活性
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-18 DOI: 10.1016/j.chembiol.2025.11.008
Wyatt Paulishak , Jianen Lyu , Michael S. VanNieuwenhze , Laurence M. Wood
Targeted drug delivery is among the fastest growing fields in cancer therapy. Advances in delivery have resulted in developments like antibody-drug conjugates (ADCs) and drug-loaded nanoparticles. Delivery, however, is hampered by target resistance, induced immunosuppression, and low tumor penetration. Listeria monocytogenes (LM) is a Gram-positive intracellular bacterium being investigated in preclinical and clinical trials as a therapeutic cancer vaccine platform. However, limited work has explored LM as a cytotoxin delivery vehicle. Here, we show that LM can deliver cytotoxin cargo resulting in increased cytotoxicity in vitro and reduced tumor growth in vivo in a microsatellite-stable (MSS) colorectal cancer (CRC) model. LM delivery of saporin dramatically improved cytotoxicity over SN38/Dox-ADC cargo. Reduced MSS CRC tumor growth was dependent on LM-mediated delivery of saporin and correlated with high immune infiltration. These results demonstrate efficacious cytotoxin delivery using LM and establish precedent for LM as a delivery vehicle for cytotoxic agents.
靶向药物输送是癌症治疗中发展最快的领域之一。递送技术的进步导致了抗体-药物偶联物(adc)和载药纳米颗粒的发展。然而,由于靶标耐药、诱导免疫抑制和肿瘤穿透率低,给药受到阻碍。单核增生李斯特菌(Listeria monocytogenes, LM)是一种革兰氏阳性细胞内细菌,正在临床前和临床试验中作为治疗性癌症疫苗平台进行研究。然而,探索LM作为细胞毒素递送载体的工作有限。在这里,我们在微卫星稳定(MSS)结直肠癌(CRC)模型中表明,LM可以递送细胞毒素货物,导致体外细胞毒性增加,体内肿瘤生长减少。LM递送皂苷显著改善SN38/Dox-ADC货物的细胞毒性。减少MSS结直肠癌肿瘤生长依赖于lm介导的皂苷传递,并与高免疫浸润相关。这些结果证明了使用LM有效地递送细胞毒素,并为LM作为细胞毒性药物的递送载体建立了先例。
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引用次数: 0
Deciphering the opioid code 破译阿片类药物密码
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-18 DOI: 10.1016/j.chembiol.2025.11.012
Steeve Akumwami , Susan L. Ingram
Mu-opioid receptors (MORs) are expressed in brain and contribute to a complex array of advantageous and deleterious behaviors. In this issue of Cell Chemical Biology, Sanchez et al.1 report a genetically encoded pharmacological tool to probe spatiotemporal release of endogenous opioids and their actions at MORs across cell types and circuits.
阿片受体(MORs)在大脑中表达,并参与一系列复杂的有利和有害行为。在这一期的《细胞化学生物学》中,Sanchez等人报道了一种基因编码药理学工具,用于探测内源性阿片样物质的时空释放及其在跨细胞类型和电路的MORs中的作用。
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引用次数: 0
Phytate enhances gut Parasutterella colonization to alleviate radiation injury 植酸促进肠道副菌定植,减轻辐射损伤
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-18 DOI: 10.1016/j.chembiol.2025.10.009
Yuan Li , Jiwei Qiu , Zhihong Liu , Huiwen Xiao , Bin Wang , Yanxi Dong , Yunong Xiao , Qi Wang , Jiali Dong , Ming Cui
Food as medicine shows promise for disease intervention or treatment. Here, we found phytate, an active ingredient of plant-based diets, exhibits properties in mitigating radiotherapy-related complications. Oral gavage of phytate restored hematogenic organ atrophy, elevated peripheral blood neutrophils and white blood cells, reduced inflammation, and improved gastrointestinal (GI) integrity in irradiated mice. Phytate intake modulated the gut microbiota, facilitating the colonization of symbiotic Parasutterella in GI tract, thus combating intestinal radiation toxicity. In vitro assays and untargeted metabolomics identified 3-phenyllactic acid (PLA) and N-acetyl-L-leucine (NL) as functional metabolites produced by Parasutterella. In vitro, ex vivo, and in vivo models showed that PLA induces M2-like polarization in macrophages, while NL reduced oxidative stress, both counteracting radiation toxicity and working synergistically. Our findings offer mechanistic insights into phytate for alleviating radiation-associated complications and suggest that Parasutterella and its metabolites might be employed as promising probiotics or postbiotics for cancer patients undergoing radiotherapy.
食物作为药物显示出干预或治疗疾病的希望。在这里,我们发现植酸盐,植物性饮食中的一种活性成分,显示出减轻放疗相关并发症的特性。在受辐射小鼠中,口服植酸恢复造血器官萎缩,提高外周血中性粒细胞和白细胞,减少炎症,改善胃肠道(GI)完整性。植酸盐的摄入调节了肠道微生物群,促进了共生副菌在胃肠道中的定植,从而对抗肠道辐射毒性。体外实验和非靶向代谢组学鉴定3-苯乳酸(PLA)和n -乙酰-l -亮氨酸(NL)是副菌产生的功能性代谢物。体外、离体和体内模型均显示,PLA诱导巨噬细胞中m2样极化,而NL则降低氧化应激,既抵消了辐射毒性,又具有协同作用。我们的研究结果为植酸减轻放射相关并发症的机制提供了见解,并表明Parasutterella及其代谢物可能被用作接受放射治疗的癌症患者的益生菌或后益生菌。
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引用次数: 0
Targeted inhibition of mu-opioid receptors in neuronal subpopulations by membrane-tethered Naloxo-DART antagonists 膜系Naloxo-DART拮抗剂对神经元亚群中多阿片受体的靶向抑制
IF 7.2 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-18 DOI: 10.1016/j.chembiol.2025.11.002
J. Sanchez , A. Bonifazi , S. Groom , M.O. Sambrook , G.A. Camacho-Hernandez , E.J. Kuijer , S. Karimi , K.U. Therese , M. Hauge Pedersen , C. Rauffenbart , M. Canals , A.H. Newman , C.P. Bailey , J.A. Javitch , J.R. Lane
Opioid receptors are expressed in virtually all neural loci contributing to the experience of pain. Due to this widespread expression, the contribution of specific cell types to the analgesic properties and deleterious side effects of opioids remains incompletely understood. Linking the activity of specific receptors in defined cells to behavioral or physiological processes remains a major challenge of translational pharmacology. In this study, we describe the development of drugs acutely restricted by membrane tethering (DART) antagonists that contain an antagonist naloxone moiety linked to a Halo-tag reactive group. The optimized Naloxo-DART displayed robust blockade of a MOR agonist only when cells co-expressed a Halo-tagged membrane tether. We use the Naloxo-DART delivered in vivo to selectively block MORs in locus coeruleus neurons in brain slide preparations. The Naloxo-DART provides a powerful approach for elucidating the physiological roles of MORs expressed in specific neuronal populations with acute spatiotemporal control.
阿片受体在几乎所有与疼痛相关的神经位点都有表达。由于这种广泛的表达,特定细胞类型对阿片类药物的镇痛特性和有害副作用的贡献仍然不完全清楚。将特定细胞中特定受体的活性与行为或生理过程联系起来仍然是翻译药理学的主要挑战。在这项研究中,我们描述了受膜系固(DART)拮抗剂急性限制的药物的发展,这些拮抗剂含有与halo标签反应基团相连的纳洛酮片段。优化后的Naloxo-DART仅在细胞共表达halo标记的膜系链时才显示出对MOR激动剂的强大阻断作用。我们使用体内递送的Naloxo-DART选择性阻断脑载玻片制备中蓝斑神经元的MORs。Naloxo-DART为阐明MORs在具有急性时空控制的特定神经元群体中表达的生理作用提供了强有力的方法。
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引用次数: 0
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Cell Chemical Biology
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