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HCM-Echo-VAR-Ensemble: Deep Ensemble Fusion to Detect Hypertrophic Cardiomyopathy in Echocardiograms HCM-Echo-VAR-Ensemble:深Ensemble融合在超声心动图中检测肥厚性心肌病
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/OJEMB.2024.3486541
Abdulsalam Almadani;Atifa Sarwar;Emmanuel Agu;Monica Ahluwalia;Jacques Kpodonu
Goal: To detect Hypertrophic Cardiomyopathy (HCM) from multiple views of Echocardiogram (cardiac ultrasound) videos. Methods: we propose HCM-Echo-VAR-Ensemble, a novel framework that performs binary classification (HCM vs. no HCM) of echocardiogram videos directly using an ensemble of state-of-the-art deep VAR architectures models (SlowFast and I3D), and fuses their predictions using majority averaging ensembling. Results: HCM-Echo-VAR-Ensemble achieved state-of-the-art accuracy of 95.28%, an F1-Score of 95.20%, a specificity of 96.20%, a sensitivity of 93.97%, a PPV of 96.46%, an NPV of 94.17%, and an AUC of 98.42%, outperforming a comprehensive set of baselines including other ensembling approaches. Conclusions: Our proposed HCM-Echo-VAR-Ensemble framework demonstrates significant potential for improving the sensitivity and accuracy of HCM detection in clinical settings, particularly by ensembling the complementary strengths of the SlowFast and I3D deep VAR models. This approach can enhance diagnostic consistency and accuracy, enabling reliable HCM diagnoses even in low-resource environments.
目的:从超声心动图(心脏超声)视频的多角度检测肥厚性心肌病(HCM)。方法:我们提出了HCM- echo -VAR- ensemble,这是一个新的框架,直接使用最先进的深度VAR架构模型(SlowFast和I3D)集成对超声心动图视频进行二元分类(HCM vs.无HCM),并使用多数平均集成融合它们的预测。结果:HCM-Echo-VAR-Ensemble的准确率为95.28%,F1-Score为95.20%,特异性为96.20%,灵敏度为93.97%,PPV为96.46%,NPV为94.17%,AUC为98.42%,优于包括其他集成方法在内的综合基线。结论:我们提出的HCM- echo -VAR- ensemble框架显示了在临床环境中提高HCM检测的敏感性和准确性的显著潜力,特别是通过整合SlowFast和I3D深度VAR模型的互补优势。这种方法可以提高诊断的一致性和准确性,即使在资源匮乏的环境中也能进行可靠的HCM诊断。
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引用次数: 0
Advancements in Clinical Evaluation and Regulatory Frameworks for AI-Driven Software as a Medical Device (SaMD) 人工智能驱动的软件作为医疗设备(SaMD)的临床评估和监管框架的进展
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-23 DOI: 10.1109/OJEMB.2024.3485534
Shiau-Ru Yang;Jen-Tzung Chien;Chen-Yi Lee
Owing to the rapid progress in artificial intelligence (AI) and the widespread use of generative learning, the problem of sparse data has been solved effectively in various research fields. The application of AI technologies has resulted in important transformations in healthcare, particularly in radiology. To ensure the high quality, safety, and effectiveness of AI and machine learning (ML) medical devices, the US Food and Drug Administration (FDA) has established regulatory guidelines to support the performance evaluation of medical devices. Furthermore, the FDA has proposed continuous surveillance requirements for AI/ML medical devices. This paper presents a summary of SaMD products that have passed the FDA 510 (k) AI/ML pathway, the challenges associated with the current AI/ML software-as-a-medical-device, and solutions for promoting the development of AI technologies in medicine. We hope to provide valuable information pertaining to medical-device design, development, and monitoring to ultimately achieve safer and more effective personalized medical services.
由于人工智能(AI)的快速发展和生成式学习的广泛应用,稀疏数据问题已在各个研究领域得到有效解决。人工智能技术的应用给医疗领域,尤其是放射学领域带来了重要变革。为确保人工智能和机器学习(ML)医疗设备的高质量、安全性和有效性,美国食品和药物管理局(FDA)制定了支持医疗设备性能评估的监管指南。此外,FDA 还提出了对 AI/ML 医疗设备的持续监控要求。本文概述了已通过 FDA 510 (k) AI/ML 途径的 SaMD 产品、当前 AI/ML 软件即医疗设备所面临的挑战,以及促进人工智能技术在医疗领域发展的解决方案。我们希望为医疗设备的设计、开发和监控提供有价值的信息,最终实现更安全、更有效的个性化医疗服务。
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引用次数: 0
Generation of Seismocardiography Heartbeats Using a Wasserstein Generative Adversarial Network With Feature Control 利用带特征控制的瓦瑟斯坦生成式对抗网络生成地震心动图心音
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-23 DOI: 10.1109/OJEMB.2024.3485535
James Skoric;Yannick D'Mello;David V. Plant
Goal: Seismocardiography (SCG) offers critical insights into cardiac performance, but its analysis often faces challenges due to the limited availability of data. This study aims to generate synthetic SCG heartbeats which can augment existing datasets to enable more research avenues. Methods: We trained a Wasserstein generative adversarial network (GAN) with gradient penalty on authentic SCG heartbeats. It was conditioned with embedded subject-specific identifiers to create individualized heartbeats. We employed linear permutations in the latent and conditional spaces to control signal features, and a convolutional network to classify lung volume states from real and synthetic data separately. Results: The model effectively replicated SCG signal morphology, while maintaining a level of variance which matches the variability of cardiac activity. Comparisons with real SCG waveforms yielded Pearson's r-squared correlation of 0.62 for average heartbeats. Linear manipulations were successful in controlling simple features although they were limited in more complex characteristics. Additionally, the model demonstrated strong performance in practical applications, with the synthetic data achieving an accuracy of 88% in lung volume classification as compared to 89% achieved with real data. Augmenting real data with additional synthetic data improved performance by 3%. Conclusions: GANs for artificial SCG heartbeat generation produce realistic and diverse results that have the potential to overcome data limitations, thereby enhancing SCG-based research.
目标:地震心动图(SCG)为了解心脏性能提供了重要依据,但由于可用数据有限,其分析往往面临挑战。本研究旨在生成合成的 SCG 心跳,以扩充现有数据集,开辟更多的研究途径。研究方法我们在真实 SCG 心跳上训练了一个带有梯度惩罚的 Wasserstein 成因对抗网络(GAN)。它以嵌入的特定受试者标识符为条件,以创建个性化的心跳。我们采用潜空间和条件空间的线性排列来控制信号特征,并使用卷积网络分别对真实数据和合成数据中的肺容积状态进行分类。结果该模型有效地复制了 SCG 信号形态,同时保持了与心脏活动变异性相匹配的方差水平。与真实 SCG 波形比较,平均心跳的皮尔逊 r 平方相关性为 0.62。线性操作成功地控制了简单的特征,但在更复杂的特征方面受到了限制。此外,该模型在实际应用中表现出很强的性能,合成数据的肺容积分类准确率为 88%,而真实数据的准确率为 89%。用额外的合成数据增强真实数据后,性能提高了 3%。结论用于生成人工 SCG 心跳的 GAN 能产生逼真、多样的结果,有望克服数据限制,从而加强基于 SCG 的研究。
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引用次数: 0
Feasibility of an Inductive Pedicle Screw Loosening Detection Concept Using a Pulse Induction Metal Detector 使用脉冲感应金属探测器进行感应式椎弓根螺钉松动检测概念的可行性
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-17 DOI: 10.1109/OJEMB.2024.3482878
Ramon Rohner;David E. Bauer;Martin Hartmann;Tobias Götschi;Mazda Farshad;Jonas Widmer
Introduction: Pedicle screw loosening is a major problem in spine surgery. Computed tomography (CT) is the gold standard to diagnose screw loosening. Disadvantages of CT include low sensitivity and specificity for the detection of loosened screws as well as the need for radiation exposure. The aim of this study was to provide a proof of concept of a novel, non-invasive, inductive sensing device for transcutaneous detection of screw loosening using a pulse induction metal detector. Materials/Methods: Two fresh frozen human cadavers were initially instrumented in the lumbar spinal region (L1 to L5). After assessment of the sensing device behavior using a wooden beam and 3D printed place holders of predefined distances, the ability of implant detection and screw stability determination were assessed during two experiments. Pedicle screw loosening was induced using 3D printed drill/loosening guides during the instrumentation of the lumbar spine. Screw stability was determined by applying weight to the spinous processes of interest and measuring the relative movement of the pedicle screw using the inductive sensor coil. Results: The sensitivity of our detection coil for an implant movement measurement showed to be high at close distances (60mV voltage change per mm movement), with signal amplitude vanishing at sensing distances of 50mm or greater. Signal amplitude significantly (p < .05) differed with the number of instrumented levels. When differentiating between instrumentation with and without loosened screws, significant (p < .05) mean differences were found in half of all comparative cases. All these differences were smaller than the predefined signal voltage threshold of (60 mV/mm). Discussion/Conclusion: In this study, the feasibility of a new, inductive and non-invasive sensor concept was tested. While the basic principle of the approach is promising, our implementation was not successful in demonstrating sufficient sensitivity for the required detectability. It appears conceivable that the concept can be successfully implemented with more sensitive sensors and more complex evaluation methods.
简介椎弓根螺钉松动是脊柱手术中的一个主要问题。计算机断层扫描(CT)是诊断螺钉松动的金标准。CT 的缺点是检测螺钉松动的灵敏度和特异性较低,而且需要接受辐射照射。本研究的目的是提供一种新型、非侵入性、感应式传感设备的概念验证,利用脉冲感应金属探测器对螺钉松动进行经皮检测。材料/方法:首先在两具新鲜冷冻人体尸体的腰椎区域(L1 至 L5)植入器械。在使用木梁和三维打印的预定距离定位器对传感设备的行为进行评估后,在两次实验中对植入物检测能力和螺钉稳定性测定进行了评估。在腰椎器械操作过程中,使用 3D 打印钻头/松动导向器诱导椎弓根螺钉松动。通过在相关棘突上施加重物,并使用感应式传感器线圈测量椎弓根螺钉的相对运动来确定螺钉的稳定性。结果:我们的检测线圈在近距离测量植入物移动时的灵敏度很高(每移动一毫米有 60mV 的电压变化),当感应距离达到或超过 50 毫米时,信号振幅就会消失。信号振幅随植入仪器的层数不同而有明显差异(p < .05)。在对螺钉松动和螺钉未松动的器械进行区分时,发现在所有比较案例中,有一半的平均差异显著(p < .05)。所有这些差异都小于预定义的信号电压阈值(60 mV/mm)。讨论/结论:在这项研究中,我们测试了一种新型感应式非侵入式传感器概念的可行性。虽然该方法的基本原理很有前途,但我们的实施并没有成功地显示出足够的灵敏度以达到所需的可探测性。可以想象,这一概念可以通过更灵敏的传感器和更复杂的评估方法成功实现。
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引用次数: 0
Optimal Transport Based Graph Kernels for Drug Property Prediction 基于最优传输的图核药物性质预测
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-14 DOI: 10.1109/OJEMB.2024.3480708
Mohammed Aburidi;Roummel Marcia
Objective: The development of pharmaceutical agents relies heavily on optimizing their pharmacodynamics, pharmacokinetics, and toxicological properties, collectively known as ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity). Accurate assessment of these properties during the early stages of drug development is challenging due to resource-intensive experimental evaluation and limited comprehensive data availability. To overcome these obstacles, there has been a growing reliance on computational and predictive tools, leveraging recent advancements in machine learning and graph-based methodologies. This study presents an innovative approach that harnesses the power of optimal transport (OT) theory to construct three graph kernels for predicting drug ADMET properties. This approach involves the use of graph matching to create a similarity matrix, which is subsequently integrated into a predictive model. Results: Through extensive evaluations on 19 distinct ADMET datasets, the potential of this methodology becomes evident. The OT-based graph kernels exhibits exceptional performance, outperforming state-of-the-art graph deep learning models in 9 out of 19 datasets, even surpassing the most impactful Graph Neural Network (GNN) that excels in 4 datasets. Furthermore, they are very competitive in 2 additional datasets. Conclusion: Our proposed novel class of OT-based graph kernels not only demonstrates a high degree of effectiveness and competitiveness but also, in contrast to graph neural networks, offers interpretability, adaptability and generalizability across multiple datasets.
目的:药物制剂的开发在很大程度上依赖于优化其药效学、药代动力学和毒理学特性,统称为ADMET(吸收、分布、代谢、排泄和毒性)。由于资源密集的实验评估和有限的综合数据可用性,在药物开发的早期阶段准确评估这些特性是具有挑战性的。为了克服这些障碍,人们越来越依赖于计算和预测工具,利用机器学习和基于图的方法的最新进展。本研究提出了一种创新的方法,利用最优输运(OT)理论的力量来构建三个图核,用于预测药物ADMET性质。这种方法包括使用图匹配来创建相似矩阵,然后将其集成到预测模型中。结果:通过对19个不同ADMET数据集的广泛评估,该方法的潜力变得明显。基于ot的图核表现出卓越的性能,在19个数据集中的9个中超过了最先进的图深度学习模型,甚至超过了最具影响力的图神经网络(GNN),后者在4个数据集中表现出色。此外,它们在另外两个数据集上非常有竞争力。结论:我们提出的基于ot的新型图核不仅显示了高度的有效性和竞争力,而且与图神经网络相比,在多个数据集上提供了可解释性、适应性和泛化性。
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引用次数: 0
Experimental Evaluation of a New Perfusion Machine Using Normothermic Cycles on Explanted Livers 对使用常温循环的新型灌注机进行实验评估
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-11 DOI: 10.1109/OJEMB.2024.3478791
Eleonora Barcali;Lorenzo Maggi;Rebecca Panconesi;Fabio Staderini;Leonardo Bocchi;Cosimo Nardi;Nadia Navari;Adriano Peris;Matteo Risaliti;Mauricio F. Carvalho;Fabio Marra;Philipp Dutkowski;Gian Luca Grazi;Andrea Schlegel;Filippo Bigi;Mattia Dimitri;Andrea Corvi
Goal: Organ perfusion is a vast subject with several techniques, the most common being Hypothermic Machine Perfusion (HMP) and Normothermic Machine Perfusion (NMP). In this paper, a new machine developed at the Biolab of the University of Florence has been tested to validate its capability to perform a well-controlled Oxygenated Rewarming (COR) phase and maintain stability during the NMP phase. Methods: The tests (n = 5) were conducted on fresh porcine livers and evaluated according to liver perfusion standards. The developed machine is based on a previous version, with an integrated control and sensor system and a complete mechanical and electronic redesign. Results: The results demonstrate the excellent usability of the machine and its ability to effectively maintain the organs in good condition. The new system performed well, and the measures made on the livers were satisfactory for good preservation of the organ. Conclusion: This study showed the effectiveness of the developed machine. Future development of the system will include a more sophisticated control system to ensure the correct parameters for perfusion.
目标:器官灌注是一个庞大的课题,有多种技术,最常见的是低温机器灌注(HMP)和常温机器灌注(NMP)。本文对佛罗伦萨大学生物实验室开发的新型机器进行了测试,以验证其是否有能力执行良好的充氧复温(COR)阶段,并在 NMP 阶段保持稳定。测试方法测试(n = 5)在新鲜猪肝上进行,并根据肝脏灌注标准进行评估。所开发的机器基于之前的版本,集成了控制和传感器系统,并进行了全面的机械和电子重新设计。结果结果表明,该机器具有出色的可用性,能够有效保持器官的良好状态。新系统性能良好,对肝脏采取的措施也令人满意,从而很好地保存了器官。结论这项研究显示了所开发机器的有效性。该系统的未来发展将包括一个更复杂的控制系统,以确保灌注参数的正确性。
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引用次数: 0
Sub-Chronic Peroneal Nerve Stimulation Lowers Ambulatory Blood Pressure in Spontaneously Hypertensive Rats 亚慢性腓肠神经刺激可降低自发性高血压大鼠的活动血压
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-10 DOI: 10.1109/OJEMB.2024.3477411
K. Romero;M.A. Gonzalez-Gonzalez;D. Lloyd;K. Nguyen;N. Eli;Y. Akay;W. Vongpatanasin;S. Smith;M. Akay;MI Romero-Ortega
Objective: Acute electrical stimulation of the common peroneal nerve (cPNS) has been shown to cause an immediate reduction in systolic blood pressure (SBP) in spontaneous hypertense rats (SHR), but the effect of this treatment in sub-chronic ambulatory SBP is unknown. Here we developed an implantable wireless WNClip neural stimulator to test the efficacy of 5-week cPNS as a treatment for hypertension. Results: Daily cPNS 2 Hz monophasic stimulation at threshold for 8 minutes every day for five weeks, reduced SBP in WKY animals by −4 mm Hg, and in SHR animals by −21 mmHg in week 5 (p < 0.01). Ambulatory SBP measured daily recorded approximately twenty-four hours after the cPNS treatment, showed a significant reduction from the first (176.6 ± 24.1 mm Hg; n = 5) to the last week of treatment (165.7± 42.7 mm Hg; n = 4), a −9 mm Hg reduction (p < 0.01). Evaluation of heart rate during the treatment showed no significant difference caused by the daily 8-minute cPNS. Conclusions: Electrical stimulation of the common peroneal nerve induced a reduction in SBP that is comparable to that reportedly achieved pharmacologically by ACE inhibitor Ramipril, or by renal denervation procedures. These results support the notion that neuromodulation of the common peroneal nerve can serve as an alternative treatment for drug resistant hypertension.
研究目的对腓总神经(cPNS)进行急性电刺激可立即降低自发性高血压大鼠(SHR)的收缩压(SBP),但这种治疗方法对亚慢性非卧床 SBP 的影响尚不清楚。在此,我们开发了一种植入式无线 WNClip 神经刺激器,以测试为期 5 周的 cPNS 作为高血压治疗方法的疗效。研究结果在第5周,每天对WKY动物进行阈值为2赫兹的单相刺激,持续8分钟,可使SBP下降-4毫米汞柱,SHR动物下降-21毫米汞柱(p < 0.01)。cPNS 治疗后大约 24 小时,每天测量的卧床 SBP 显示,从治疗的第一周(176.6± 24.1 mm Hg;n = 5)到最后一周(165.7± 42.7 mm Hg;n = 4),SBP 显著降低了 -9 mm Hg(p < 0.01)。对治疗期间心率的评估显示,每天 8 分钟的 cPNS 没有造成显著差异。结论对腓总神经的电刺激可降低 SBP,与 ACE 抑制剂雷米普利或肾脏去神经程序的药理作用相当。这些结果支持了这样一种观点,即腓总神经的神经调节可作为治疗耐药性高血压的替代疗法。
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引用次数: 0
Neural Implants Without Active Implanted Electronics: Possibilities and Limitations of Transcutaneous Coupling in Miniaturized Active Implants 无主动植入电子装置的神经植入物:微型有源植入体经皮耦合的可能性和局限性
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-09 DOI: 10.1109/OJEMB.2024.3477267
Patrick Kiele;Gregor Laengle;Martin Schmoll;Cristian Pasluosta;Ronny Pfeifer;Martin Schuettler;Oskar Aszmann;Thomas Stieglitz
Goal: Transcutaneous coupling scheme for wireless powering and signal in active implants are known for more than a decade. This study aimed to investigate the in vivo behavior of this approach to drive multiple channels of an implanted peripheral nerve interfaces. Methods: The stimulation signals were transmitted through the skin over two contacts to an intracorporeal counterpart which was connected to a cuff electrode with two channels. EMG after stimulation was measured to establish recruitment curves. Results: Limitations of transcutaneous coupling were found in the feasible complexity of the system. High electrical crosstalk in a multi-channel system reduces this approach to low channel applications, such as pain treatment. No significant influence of the pulse width or extracorporeal stimulation amplitude on the electrical crosstalk was observed. Conclusions: The study's findings provide insight into the behavior of the transcutaneous coupling scheme in vivo and highlight the limitations and areas of application. Our results indicate that transcutaneous coupling schemes are a promising alternative approach for wireless powering of implants, as it does not require complex implanted electronics, expensive sophisticated electronics, and hermetic enclosures. Physical constraints, however, limit the use in highly selective nerve stimulation scenarios.
目标:用于有源植入物无线供电和信号的经皮耦合方案已有十多年历史。本研究旨在调查这种方法在体内驱动植入式外周神经接口多通道的行为。研究方法刺激信号通过皮肤的两个触点传输到体外对应装置,体外对应装置连接到带有两个通道的袖带电极。测量刺激后的肌电图以建立招募曲线。结果:经皮耦合的局限性在于系统的可行性复杂性。多通道系统中的高电串扰使这种方法只能应用于低通道,如疼痛治疗。脉冲宽度或体外刺激幅度对电串扰没有明显影响。结论:研究结果让我们深入了解了体内经皮耦合方案的行为,并强调了其局限性和应用领域。我们的研究结果表明,经皮耦合方案是一种很有前途的植入物无线供电替代方法,因为它不需要复杂的植入电子设备、昂贵的精密电子器件和密封外壳。不过,由于物理上的限制,它在高选择性神经刺激方案中的应用受到了限制。
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引用次数: 0
Optical Taxonomic Signal and the Diagnosis of Alzheimer's Disease 光学分类信号与阿尔茨海默病诊断
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-09 DOI: 10.1109/OJEMB.2024.3477449
Frank A. Greco;Brent R. Schell;Eugene B. Hanlon
Goal: We previously demonstrated that near-infrared spectroscopy in vivo presents spectral features at 895 and 861 nm that accurately classify Alzheimer's disease, mild cognitive impairment, and age-matched control subjects. Our purpose here is to associate the 895 nm signal with $beta$-amyloid. Methods: We applied our feature selection technique to subjects with and without leptomeningeal amyloid. We developed a novel concept, optical taxonomic signal, to determine the dependence of signal on source-detector distance. Results: Features at 891 and 768 nm discriminate between subjects with and without leptomeningeal $beta$-amyloid. The variation of optical taxonomic signal with source-detector distance indicates that both signals come from the leptomeninges and not cerebral cortex. The two features are highly correlated and likely result from the same cellular material. Conclusions: The discovery of an 891 nm feature that clearly depends upon the presence of $beta$-amyloid supports our hypothesis that the 895 nm feature previously discovered also reports $beta$-amyloid.
目标:我们之前已经证明,体内近红外光谱在 895 和 861 纳米波段呈现出的光谱特征可以准确地对阿尔茨海默病、轻度认知障碍和年龄匹配的对照受试者进行分类。我们这里的目的是将 895 nm 波长的信号与β-淀粉样蛋白联系起来。研究方法我们将我们的特征选择技术应用于有和无脑侧淀粉样蛋白的受试者。我们提出了一个新概念--光学分类信号,以确定信号对源-探测器距离的依赖性。研究结果891 纳米和 768 纳米波长的特征可区分有无脑膜淀粉样蛋白的受试者。光学分类信号随光源-检测器距离的变化表明,这两个信号都来自脑膜而非大脑皮层。这两个特征高度相关,很可能来自相同的细胞材料。结论891 nm 波长特征的发现显然取决于 $beta$- 淀粉样蛋白的存在,这支持了我们的假设,即之前发现的 895 nm 波长特征也报告了 $beta$- 淀粉样蛋白。
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引用次数: 0
Miniaturized Devices for Isothermal Amplification and Photometric Quantification of Pseudomonas Aeruginosa 用于绿脓杆菌等温放大和光度定量的微型装置
IF 2.7 Q3 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-09 DOI: 10.1109/OJEMB.2024.3477315
Ramya Priya;Satish Kumar Dubey;Sanket Goel
Goal: This study introduced a proof-of-concept prototype for isothermal recombinase polymerase amplification (RPA) with miniaturized photometric detection, enabling rapid P. aeruginosa detection. Methods: The researchers conducted the amplification process within a microchamber with a diameter of 10 mm, utilizing a standalone Thermostat driven thermal management setup. RPA, an amplification technique was employed, which required a lower operating temperature of 37 °C–40 °C to complete the reaction. The amplified amplicon was labeled with a fluorophore reporter, stimulated by an LED light source, and detected in real-time using a photodiode. Results: The developed prototype successfully demonstrated the rapid detection of P. aeruginosa using the RPA assay. The process only required the utilization of 0.04 ng of working concentration of DNA. The entire process, from amplification to detection, could be completed in over 15 minutes. The platform showed enhanced sensitivity and specificity, providing a cost-effective and accurate solution for on-site detection/quantification of pathogens. Conclusions: The integration of isothermal RPA with the miniaturized photometric detection platform proved successful in achieving the goal of rapid and specific pathogen detection. This study proved the benefits of Isothermal Nucleic Acid Amplification Technology (INAAT), emphasizing its potential as an accessible, user-friendly point-of-care technology for resource-constrained institutions. The RPA-based prototype demonstrated capability without requiring costly laboratory equipment or expertise. The developed platform, when combined with Internet of Things (IoT) enabled cloud platform, also allowed remote monitoring of data. Overall, the methodology presented in this study offered a cost-effective, accurate, and convenient solution for on-site testing in resource-limited settings.
目标:本研究引入了一种概念验证原型,用于等温重组酶聚合酶扩增(RPA)和微型光度检测,从而实现铜绿假单胞菌的快速检测。方法:研究人员利用独立恒温器驱动的热管理装置,在直径为 10 毫米的微室中进行扩增处理。采用了一种扩增技术 RPA,该技术需要较低的工作温度(37 ℃-40 ℃)来完成反应。扩增的扩增子用荧光团报告标记,由 LED 光源刺激,并用光电二极管实时检测。结果:开发的原型成功证明了使用 RPA 检测法可快速检测铜绿假单胞菌。整个过程只需要使用 0.04 纳克工作浓度的 DNA。从扩增到检测的整个过程可在 15 分钟内完成。该平台显示出更高的灵敏度和特异性,为现场检测/定量病原体提供了一种经济有效的准确解决方案。结论事实证明,等温 RPA 与微型光度检测平台的整合成功地实现了快速和特异性病原体检测的目标。这项研究证明了等温核酸扩增技术(INAAT)的优势,并强调了它作为资源有限的机构可使用的、用户友好的护理点技术的潜力。以 RPA 为基础的原型无需昂贵的实验室设备或专业知识就能证明其能力。所开发的平台与支持物联网(IoT)的云平台相结合,还可对数据进行远程监控。总之,本研究提出的方法为资源有限环境下的现场检测提供了一种经济、准确、便捷的解决方案。
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引用次数: 0
期刊
IEEE Open Journal of Engineering in Medicine and Biology
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