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Association of gut microbiota in the pathogenesis of acute respiratory distress syndrome and possible pharmacotherapy by sphingosine-1-phosphate 肠道菌群与急性呼吸窘迫综合征发病机制的关系以及鞘氨醇-1-磷酸可能的药物治疗
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.5455/jabet.2023.d151
Tasbir Amin, Fahd Zahed
The Acute Respiratory Distress Syndrome (ARDS) is one of the major heterogeneous clinical manifestations of severe respiratory failure developing in response to pathogenetic mechanisms and several inflammatory insults. The translocation of gut microbiota has a crucial impact on the pathogenesis of ARDS. Hence, a deeper understanding of the interplay of the gut microbiota would allow shedding valuable insights into both the pathogenesis of ARDS and the development of effective therapeutic interventions. Moreover, the modulation of gut-lung axis could also play a pivotal role in minimizing the lung dysbiosis with gut microbiota. There is little question that greater study of the gut-lung axis in critically ill patients is required to establish causal links between the shifted microbiota, infections, inflammation, and acute lung damage. It is worth mentioning that the lack of effective preventative measures is one of the main reasons for the increased mortality rate of 30-40% in ARDS patients. Some antibiotics and nanosized drugs showed positive results in ARDS management to some extent in pre-clinical or even first stages of clinical trials but large-scale results had been controversial. However, Sphingosine-1-Phosphate (S1P) showed hopeful results in ARDS patients by facilitating both systemic and endothelial integrity. Numerous investigations have shown the immunological connection between the gastrointestinal tract and the respiratory system. As the SphKs /S1P /S1PL metabolic pathway is associated with a wide variety of human illnesses (including respiratory diseases), it should come as no surprise that influencing intracellular S1P levels would have therapeutic promise in reducing the severity of lung diseases like ARDS.
急性呼吸窘迫综合征(Acute Respiratory Distress Syndrome, ARDS)是严重呼吸衰竭的主要异质临床表现之一,其发展与发病机制和多种炎症损伤有关。肠道菌群的易位对ARDS的发病有重要影响。因此,深入了解肠道微生物群的相互作用将有助于对ARDS的发病机制和有效治疗干预措施的发展提供有价值的见解。此外,肠-肺轴的调节也可能在减少肺部与肠道菌群的生态失调中起关键作用。毫无疑问,需要对危重患者的肠-肺轴进行更深入的研究,以确定微生物群转移、感染、炎症和急性肺损伤之间的因果关系。值得一提的是,缺乏有效的预防措施是导致ARDS患者死亡率增加30-40%的主要原因之一。一些抗生素和纳米药物在临床前甚至临床初期试验中对ARDS的治疗有一定的积极效果,但大规模的结果存在争议。然而,鞘氨醇-1-磷酸(S1P)通过促进全身和内皮的完整性,在ARDS患者中显示出有希望的结果。许多研究表明,胃肠道和呼吸系统之间存在免疫学联系。由于SphKs /S1P /S1PL代谢途径与多种人类疾病(包括呼吸系统疾病)相关,因此影响细胞内S1P水平在降低ARDS等肺部疾病的严重程度方面具有治疗前景也就不足为奇了。
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引用次数: 0
Epidemiological comparison of the first and second wave of COVID-19 Pandemic in Dhaka, Bangladesh: A cross-sectional study among suspected cases. 孟加拉国达卡第一波和第二波COVID-19大流行的流行病学比较:疑似病例的横断面研究
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d101
Islam, Israk, Jahan
Many countries have been seen two wave patterns of reported cases of coronavirus diseases. Still, a limited number of studies compared the epidemiological attributes of the first wave and second wave of coronavirus diseases 2019 (COVID-19) outbreak. This study was carried out to compare the epidemics of two waves in Bangladesh. This observational study data of suspected cases was collected from June 2020 to April 2021 from a local authorized diagnostic center. From June 27, 2020, to July 27, 2020, was considered as the first wave and from March 20, 2021, to April 20, 2021, was considered a second wave. This period was determined because of observing the highest number of positive cases during that period. Out of 21,359 cases, including 2429 (11.37%) individuals in the first wave and 4989 (23.36%) individuals in the second wave had RT-PCR test for disease confirmation. Among them, 315 people in the first wave and 630 in the second wave were positive for SARS-CoV-2 RNA. Male were more vernalized to the positive case, including 204 (64.8%) and 421 (66.8%) during the first and second waves, respectively. People under 41 found 56.2% positive cases during the first wave while it was 65.6% in the second wave. We also found 128 positive cases among international travelers. In conclusion, a large extent of different epidemiological attributes was found in the second wave compared to the first wave of the outbreaks.
许多国家报告的冠状病毒病例出现了两波模式。尽管如此,有限数量的研究比较了2019年第一波和第二波冠状病毒疾病(COVID-19)爆发的流行病学特征。进行这项研究是为了比较孟加拉国两波流行。疑似病例的观察性研究数据于2020年6月至2021年4月从当地授权诊断中心收集。从2020年6月27日到2020年7月27日被认为是第一波,从2021年3月20日到2021年4月20日被认为是第二波。之所以确定这一时期,是因为在这一时期观察到的阳性病例数量最多。在21359例病例中,第一波2429例(11.37%),第二波4989例(23.36%)进行了RT-PCR确诊。其中,第一波315人、第二波630人的SARS-CoV-2 RNA阳性。阳性病例以男性春化为主,第一波和第二波分别有204例(64.8%)和421例(66.8%)。41岁以下人群在第一波中阳性病例占56.2%,在第二波中阳性病例占65.6%。我们还在国际旅行者中发现了128例阳性病例。总之,与第一波暴发相比,在第二波暴发中发现了很大程度上不同的流行病学属性。
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引用次数: 5
Impact of process validation and equipment qualification in production of bio-therapeutics 工艺验证和设备确认对生物制剂生产的影响
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d105
G. Ghosh, R. Bodroth, Basabjit Dutta
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引用次数: 0
Pathological investigation and molecular detection of bacterial zoonotic diseases of slaughtered cattle in Bangladesh 孟加拉屠宰牛细菌性人畜共患病的病理调查和分子检测
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d113
N. Sultana, M. Pervin, S. Sultana, Moutuza Mostaree, S. Belal, Mohammad Khan
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引用次数: 0
COVID-19 drugs: A necessary strategy for living with COVID-19 in the new normal and the mutations of the SARS-CoV-2 such as omicron variant COVID-19药物:新常态和SARS-CoV-2组粒变异等突变下生存的必要策略
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d111
Dinh chu, N. Bui, Yen Thi, Suong Ngoc
The COVID-19 pandemic has spread rapidly and caused significant damage to global public health as well as the economy. While the race of vaccine developmentICLE witnessed a spectacular breakthrough with the introduction of highly effective vaccines such as BNT162b2, mRNA-1273, or AZD1222, no specific drug for COVID-19 treatment has been discovered yet. Recently, repurposing drugs classified into three main groups of mechanisms, including antivirus, anti-SARS-CoV-2 antibodies, and immunomodulators, are investigated. As a result, Remdesivir and six other drugs are authorized by the Food and Drug Administration (FDA) to treat patients infected by the SARS-CoV-2. This work aims to highlight that, besides vaccines, COVID-19 drugs should get more attention and be considered as one of the most promising strategies to safely coexist with the SARS-CoV-2 virus in the new normal status and for the mutations of the virus, such as the omicron variant. © 2022, Bangladesh Society for Microbiology, Immunology and Advanced Biotechnology. All rights reserved.
新冠肺炎疫情迅速蔓延,对全球公共卫生和经济造成重大损害。虽然随着BNT162b2、mRNA-1273、AZD1222等高效疫苗的问世,疫苗开发竞赛取得了惊人的突破,但目前还没有发现针对COVID-19的特异性药物。最近,对药物再利用的研究主要分为三大类机制,包括抗病毒药物、抗sars - cov -2抗体和免疫调节剂。因此,Remdesivir和其他六种药物被美国食品和药物管理局(FDA)批准用于治疗感染SARS-CoV-2的患者。这项工作旨在强调,除了疫苗,COVID-19药物应该得到更多的关注,并被认为是在新常态下与SARS-CoV-2病毒安全共存的最有希望的策略之一,以及病毒的突变,如组粒变异。©2022,孟加拉国微生物学、免疫学和先进生物技术学会。版权所有。
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引用次数: 0
Quantitative analysis of the factors influencing IDA and TSH downregulation in correlation to the fluctuation of activated vitamin D3 in women 影响IDA和TSH下调与女性活性维生素D3波动相关因素的定量分析
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d118
S. Azad, Sharmin Ahmed, P. Biswas, M. Mia, M. Farjana, F. Arshe, S. Mily, A. Ankhi, M. Shaikat, Sabeeha Sultana, Kashfia Mawa, Z. Naim, M. Rahman, Bonglee Kim
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引用次数: 11
HtrA1 and HtrA2 expression differentially modulate the clinical prognosis of cancer: a multi-omics analysis using bioinformatics approaches. HtrA1和HtrA2表达差异调节癌症临床预后:使用生物信息学方法的多组学分析
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d121
A. Reza, Mohamad Tarik, R. Hasib, M. Alam, Md Mamunur Rahman, Mohammad Jamal
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引用次数: 0
The correlation between diabetes mellitus and COVID-19 severity in Babylon Province 巴比伦省糖尿病与COVID-19严重程度的相关性
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d127
Maryam Hussain, Ali M. Saadi
Compared to other pandemic diseases, COVID-19 had the highest transmission rate and high fatality risk. Diabetes is the hand was also one of the most frequent diseases among individuals. This study aimed to evaluate the relationship between diabetic patients infected by COVID-19 and some hematological parameters associated with diabetes and COVID-19.ICLE Patients with COVID-19 were diagnosed by PCR and/or chest computer topography (CT) scan, eight parameters were detected by AFIAS-6. The results of eight parameters for patients with diabetes mellitus infected with COVID-19 and patients with COVID-19 only showed that the Mean of Fasting Blood Glucose (FBG), glycated haemoglobin HbA1c, Insulin Sensitivity (INS) and ferritin show significant differences at (0.000, 0.000, 0.017, 0.000) respectively for the two groups, while insulin resistance (INR), insulin (IN), C-reactive protein (CRP) and D-dimer don’t show any significant differences for two groups, the statistical analysis performed at P-value ≤ 0.01 and 0.05. Infection duration results showed that the mean Insulin level (IN) and D-dimer show significant differences at (0.033 and 0.011) respectively for all infection duration categories, while FBG, HbA1c, INR, INS, CRP, and ferritin don’t show any significant differences for all day’s category. The Correlation Coefficients Between diabetes mellitus patients infected with COVID-19 and blood parameters highly correlated between FBG with INR at (0.647), HbA1c with IN at (0.078), INR with IN at (0.791), INS with CT-Scan at (0.058), CRP with D-dimer at (0.287), D-dimer with ferritin at (0.331), Ferritin with infection duration at (0.098). In conclusion, we find that the diabetes mellitus patients infected with COVID-19 suffer from a high increase of inflammatory proteins and parameters associated with diabetes compared to other patients infected with COVID-19 only, making them more susceptible to disease and more deaths compared to other people. © 2022, Bangladesh Society for Microbiology, Immunology and Advanced Biotechnology. All rights reserved.
与其他大流行疾病相比,COVID-19的传播率最高,死亡风险高。糖尿病也是个体中最常见的疾病之一。本研究旨在探讨糖尿病患者感染COVID-19与糖尿病和COVID-19相关的一些血液学参数的关系。采用PCR和(或)胸部CT (computer tomography,简称CT)扫描诊断新冠肺炎,采用AFIAS-6检测8项参数。糖尿病合并COVID-19患者与合并COVID-19患者的8项参数结果仅显示两组空腹血糖(FBG)、糖化血红蛋白(HbA1c)、胰岛素敏感性(INS)和铁蛋白的平均值分别为(0.000、0.000、0.017、0.000),差异有统计学意义,而胰岛素抵抗(INR)、胰岛素(IN)、c反应蛋白(CRP)和d -二聚体两组差异无统计学意义。p值≤0.01、0.05进行统计学分析。感染持续时间结果显示,在所有感染持续时间类别中,胰岛素水平(IN)和d -二聚体的平均值分别为(0.033和0.011),而FBG、HbA1c、INR、INS、CRP和铁蛋白在全天类别中无显著差异。糖尿病感染COVID-19患者与血液参数的相关系数与FBG与INR(0.647)、HbA1c与IN(0.078)、INR与IN(0.791)、INS与ct扫描(0.058)、CRP与d -二聚体(0.287)、d -二聚体与铁蛋白(0.331)、铁蛋白与感染时间(0.098)高度相关。综上所述,我们发现,与其他仅感染COVID-19的患者相比,感染COVID-19的糖尿病患者与糖尿病相关的炎症蛋白和参数大幅增加,使其更容易患病,死亡人数也高于其他人群。©2022,孟加拉国微生物学、免疫学和先进生物技术学会。版权所有。
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引用次数: 0
Molecular characterization and antibacterial activities of mangrove fungal endophytes from coastal Kenya 肯尼亚沿海红树林内生真菌分子特征及抗菌活性研究
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d144
H. Kiti, C. Kibiti, C. Munga, J. Odalo, Paul M. Guyo, S. Mwamburi
Abstract The advent of resistant pathogenic bacteria and fungi across the globe is threatening the efficacy of antibiotic drugs. Thus, microbial infections are becoming a threat to life. Endophytic fungi remain a viable source of secondary metabolites with unique spectra of biological activities. This study isolated and characterized endophytic fungi from selected mangrove species of coastal Kenya and further ascertained their activities. A total of 18 fungal endophytes selected from mangrove species were investigated for antimicrobial activity against gram-positive Staphylococcus aureus and gram-negative Escherichia coli. Potato dextrose agar and potato dextrose broth were used for isolation, purification, and fermentation at 28oC for 7–15 days. Extraction of fungal metabolites was achieved using ethyl acetate (1:1 v/v) and ethyl acetate in 10% methanol (9:1 v/v). Solvents were recovered in a fume hood and extracts were dissolved in 1 ml of dimethyl sulfoxide. Molecular characterization completely identified 9 species, namely: Aspergillus flavus, Aspergillus niger, Aspergillus tubingensis, Aspergillus oryzae, Rhizophora nomius, Aspergillus awamori, Aspergillus aculeatus, Aspergillus bravionivious, and Aspergillus welwitchiae. The minimum inhibitory concentration of ethyl acetate crude extracts of the most active fungal isolate, A. flavus (MT447532.1), was 0.91 0.05 mg/ml and 0.82 0.052 mg/ml against S. aureus and E. coli, respectively. Results showed that some crude extracts of mangrove fungal endophytes from coastal Kenya are effective against bacteria, hence a promising source of novel organic natural metabolites with a possible wide range of biological activities.
摘要全球范围内耐药病原菌和真菌的出现正威胁着抗生素药物的疗效。因此,微生物感染正成为对生命的威胁。内生真菌具有独特的生物活性谱,是次生代谢产物的有效来源。本研究从肯尼亚沿海的红树林中分离和鉴定了内生真菌,并进一步确定了它们的活性。研究了18株红树林内生真菌对革兰氏阳性金黄色葡萄球菌和革兰氏阴性大肠杆菌的抑菌活性。采用马铃薯葡萄糖琼脂和马铃薯葡萄糖肉汤分离纯化,28℃发酵7 ~ 15 d。用乙酸乙酯(1:1 v/v)和乙酸乙酯(9:1 v/v)分别提取真菌代谢物。溶剂在通风橱中回收,提取物溶解在1ml二甲亚砜中。分子鉴定完全鉴定出9种,分别为:黄曲霉、黑曲霉、塔bingaspergillensis、米曲霉、根霉、awamaspergillus、aculeaspergillus、bravioniaspergillus、welwelchiae。活性最强的真菌分离物A. flavus (MT447532.1)乙酸乙酯粗提物对金黄色葡萄球菌和大肠杆菌的最低抑菌浓度分别为0.91 0.05 mg/ml和0.82 0.052 mg/ml。结果表明,肯尼亚沿海红树林真菌内生菌粗提物具有一定的抑菌活性,是一种具有广泛生物活性的新型有机天然代谢物来源。
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引用次数: 1
Micro-RNA evaluation, specification, and stabilization study in mixed/non-mixed body fluids as a specific molecular marker 混合/非混合体液中作为特定分子标记物的微rna评价、规范和稳定性研究
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.5455/jabet.2022.d120
Yasir Mawlah, M. Naji, Mustafa Jawad Al-Imari, H. Abdulabbas
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引用次数: 1
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Journal of Advanced Biotechnology and Experimental Therapeutics
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