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Diagnostic Value of Potential MicroRNAs in CRC: A Meta-Analysis. 潜在microrna在CRC中的诊断价值:一项荟萃分析。
Pub Date : 2022-01-01 DOI: 10.2174/2211536611666220523103316
Sofia Fathi, Fadila Guessous, Mehdi Karkouri

Background: MicroRNAs (miRNAs) are small noncoding RNA molecules involved in the post-transcriptional regulation of genes. Deregulated expression of miRNAs is involved in different pathogenic mechanisms, particularly colorectal cancer (CRC) carcinogenesis. Due to their stability and accessibility, circulating miRNAs represent a new family of biomarkers with great potential. Therefore, certain miRNAs can be used as diagnostic biomarkers in CRC.

Objective: This systematic analysis aimed to explore the individual efficacy of the most investigated blood-based miRNAs for CRC diagnosis, namely miR-21, miR-29a and miR-92a.

Methods: Articles were retrieved from databases such as PubMed and Google Scholar, and studies designed to evaluate the diagnostic value of microRNAs in CRC were then selected. We subsequently explored the diagnostic accuracy of each miRNA using parameters such as (SE, SPE, PLR, NLR). The meta-analysis was performed using the Review Manager (Revman) 5.4 software and the Meta Disc software.

Results: Our results suggested that serum miR-21 levels showed great potential as a diagnostic molecular marker. The overall pooled results for sensitivity, specificity, area under the curve (AUC), PLR, and NLR were 78%, 91%, 0.9519, 8.12 and 0.17, respectively.

Conclusion: miRNAs have become increasingly important in the diagnosis of CRC. Based on these findings, circulating miR-21 levels may have a potential value for early detection and might be used as a novel diagnostic biomarker for CRC.

背景:MicroRNAs (miRNAs)是参与基因转录后调控的小非编码RNA分子。mirna的表达失调参与了不同的致病机制,特别是结直肠癌(CRC)的癌变。由于其稳定性和可及性,循环mirna代表了一个具有巨大潜力的新生物标志物家族。因此,某些mirna可作为结直肠癌的诊断性生物标志物。目的:本系统分析旨在探讨研究最多的基于血液的mirna,即miR-21、miR-29a和miR-92a在结直肠癌诊断中的个体疗效。方法:从PubMed和Google Scholar等数据库中检索文章,然后选择旨在评估microrna在CRC中的诊断价值的研究。随后,我们使用(SE, SPE, PLR, NLR)等参数探讨了每个miRNA的诊断准确性。Meta分析采用Review Manager (Revman) 5.4软件和Meta Disc软件进行。结果:我们的研究结果表明血清miR-21水平作为诊断分子标志物具有很大的潜力。敏感性、特异性、曲线下面积(AUC)、PLR和NLR的综合结果分别为78%、91%、0.9519、8.12和0.17。结论:mirna在结直肠癌的诊断中越来越重要。基于这些发现,循环miR-21水平可能具有早期检测的潜在价值,并可能作为CRC的一种新的诊断生物标志物。
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引用次数: 2
MicroRNA-16 Represses TGF-β1-induced Epithelial-to-Mesenchymal Transition in Human Lung Adenocarcinoma Cell Line. MicroRNA-16抑制TGF-β1诱导的人肺腺癌细胞上皮向间质转化
Pub Date : 2022-01-01 DOI: 10.2174/2211536611666220826124058
Subbiah Rajasekaran, Sehal Mishra, Deepa Gandhi

Background: The transforming growth factor-beta1 (TGF-β1)-induced epithelial-tomesenchymal transition (EMT) has a crucial effect on the progression and metastasis of lung cancer cells.

Objective: The purpose of this study was to investigate whether microRNA (miR)-16 can suppress TGF-β1-induced EMT and proliferation in human lung adenocarcinoma cell line (A549).

Methods: Quantitative real-time polymerase chain reaction (RT-qPCR) was used to detect the expression of miR-16. The hallmarks of EMT were assessed by RT-qPCR, Western blotting, and cell proliferation assay. A bioinformatics tool was used to identify the putative target of miR-16. The activation of TGF-β1/Smad3 signaling was analysed using Western blotting.

Results: Our results showed that miR-16 expression was significantly down-regulated by TGF-β1 in A549 cells. Moreover, agomir of miR-16 suppressed TGF-β1-induced EMT and cell proliferation. Computational algorithms predicted that the 3'-untranslated regions (3'-UTRs) of Smad3 are direct targets of miR-16. In addition, miR-16 mimic was found to inhibit the TGF-β1-induced activation of the TGF-β1/Smad3 pathway, suggesting that miR-16 may function partly through regulating Smad3.

Conclusion: Our results demonstrated that overexpression of miR-16 suppressed the expression and activation of Smad3, and ultimately inhibited TGF-β1-induced EMT and proliferation in A549 cells. The present findings support further investigation of the anti-cancer effect of miR-16 in animal models of lung cancer to validate the therapeutic potential.

背景:转化生长因子-β1 (TGF-β1)诱导的上皮-间充质转化(EMT)在肺癌细胞的进展和转移中起着至关重要的作用。目的:探讨microRNA (miR)-16是否能抑制TGF-β1诱导的人肺腺癌细胞(A549)的EMT和增殖。方法:采用实时定量聚合酶链反应(RT-qPCR)检测miR-16的表达。通过RT-qPCR、Western blotting和细胞增殖试验评估EMT的特征。使用生物信息学工具鉴定miR-16的假定靶点。Western blotting分析TGF-β1/Smad3信号的激活情况。结果:我们的研究结果显示TGF-β1在A549细胞中显著下调miR-16的表达。此外,miR-16的agomir抑制TGF-β1诱导的EMT和细胞增殖。计算算法预测Smad3的3'-未翻译区(3'- utr)是miR-16的直接靶点。此外,miR-16 mimic被发现抑制TGF-β1诱导的TGF-β1/Smad3通路的激活,提示miR-16可能部分通过调节Smad3发挥作用。结论:我们的研究结果表明,过表达miR-16抑制Smad3的表达和激活,最终抑制TGF-β1诱导的A549细胞EMT和增殖。本研究结果支持进一步研究miR-16在肺癌动物模型中的抗癌作用,以验证其治疗潜力。
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引用次数: 1
P68 RNA Helicase (DDX5) Required for the Formation of Various Specific and Mature miRNA Active RISC Complexes. 形成各种特异性和成熟的miRNA活性RISC复合物所需的P68 RNA螺旋酶(DDX5)。
Pub Date : 2022-01-01 DOI: 10.2174/2211536611666220218121640
Mariette Kokolo, Montse Bach-Elias

Introduction: DEAD-box RNA helicases catalyze the ATP-dependent unwinding of doublestranded RNA. In addition, they are required for protein displacement and remodelling of RNA or RNA/protein complexes. P68 RNA helicase regulates the alternative splicing of the important protooncogene H-Ras, and numerous studies have shown that p68 RNA helicase is probably involved in miRNA biogenesis, mainly through Drosha and RISC/DICER complexes.

Objective: This study aimed to determine how p68 RNA helicase affects the activity of selected mature miRNAs, including miR-342, miR-330, miR-138 and miR-206, miR-126, and miR-335, and let-7a, which are known to be related to cancer processes.

Methods: The miRNA levels were analyzed in stable HeLa cells containing p68 RNA helicase RNAi induced by doxycycline (DOX). Relevant results were repeated using transient transfection with pSuper/ pSuper-p68 RNA helicase RNAi to avoid DOX interference.

Results: Herein, we reported that p68 RNA helicase downregulation increases the accumulation of the mature miRNAs, such as miR-126, let-7a, miR-206, and miR-138. Interestingly, the accumulation of these mature miRNAs does not downregulate their known protein targets, thus suggesting that p68 RNA helicase is required for mature miRNA-active RISC complex activity.

Conclusion: Furthermore, we demonstrated that this requirement is conserved, as drosophila p68 RNA helicase can complete the p68 RNA helicase depleted activity in human cells. Dicer and Drosha proteins are not affected by the downregulation of p68 RNA helicase despite the fact that Dicer is also localized in the nucleus when p68 RNA helicase activity is reduced.

引言:DEAD-box RNA解旋酶催化双链RNA的ATP依赖性解链。此外,它们是RNA或RNA/蛋白质复合物的蛋白质置换和重塑所必需的。p68RNA解旋酶调节重要原癌基因H-Ras的选择性剪接,大量研究表明,p68RNA解旋酶可能主要通过Drosha和RISC/DICER复合物参与miRNA的生物发生。目的:本研究旨在确定p68RNA解旋酶如何影响所选成熟miRNA的活性,包括miR-342、miR-330、miR-138和miR-206、miR-126和miR-335以及let-7a,这些已知与癌症过程有关。方法:在多西环素(DOX)诱导的含有p68RNA解旋酶RNAi的稳定HeLa细胞中分析miRNA水平。使用pSuper/pSuper-p68RNA解旋酶RNAi的瞬时转染重复相关结果以避免DOX干扰。结果:在此,我们报道了p68RNA解旋酶下调增加了成熟miRNA的积累,如miR-126、let-7a、miR-206和miR-138。有趣的是,这些成熟miRNA的积累并没有下调其已知的蛋白质靶标,因此表明p68RNA解旋酶是成熟miRNA活性RISC复合物活性所必需的。结论:此外,我们证明了这一要求是保守的,因为果蝇p68RNA解旋酶可以在人类细胞中完成p68RNA螺旋酶缺失的活性。Dicer和Drosha蛋白不受p68RNA解旋酶下调的影响,尽管当p68RNA解旋酶活性降低时Dicer也定位在细胞核中。
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引用次数: 2
Meet the Editorial Board Member 会见编辑委员会成员
Pub Date : 2021-12-01 DOI: 10.2174/221153661004211231212125
K. Dua
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引用次数: 0
Meet the Associate Editor 与副主编见面
Pub Date : 2021-03-01 DOI: 10.2174/221153661001210820092316
W. Tam
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引用次数: 0
Preface 前言
Pub Date : 2021-03-01 DOI: 10.2174/221153661001210820091622
Alberto Izzotti
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引用次数: 0
Meet Our Editorial Board Member 见见我们的编辑委员会成员
Pub Date : 2021-02-22 DOI: 10.2174/221153660905210222160245
Sercan Ergun
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引用次数: 0
Meet Our Associate Editorial Board Member 见见我们的副编辑委员会成员
Pub Date : 2021-02-03 DOI: 10.2174/221153660904210104161130
D. Chitkara
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引用次数: 0
Histone Modifier Differentially Regulates Gene Expression and Unravels Survival Role of MicroRNA-494 in Jurkat Leukemia. 组蛋白修饰因子差异调控Jurkat白血病MicroRNA-494基因表达及生存作用
Pub Date : 2021-01-01 DOI: 10.2174/2211536610666210412153322
Arathi Jayaraman, Tong Zhou, Sundararajan Jayaraman

Background: Although the protein-coding genes are subject to histone hyperacetylation- mediated regulation, it is unclear whether microRNAs are similarly regulated in the T cell leukemia Jurkat.

Objective: To determine whether treatment with the histone modifier Trichostatin A could concurrently alter the expression profiles of microRNAs and protein-coding genes.

Methods: Changes in histone hyperacetylation and viability in response to drug treatment were analyzed, respectively, using western blotting and flow cytometry. Paired global expression profiling of microRNAs and coding genes was performed and highly regulated genes have been validated by qRT-PCR. The interrelationships between the drug-induced miR-494 upregulation, the expression of putative target genes, and T cell receptor-mediated apoptosis were evaluated using qRT-PCR, flow cytometry, and western blotting following lipid-mediated transfection with specific anti-microRNA inhibitors.

Results: Treatment of Jurkat cells with Trichostatin A resulted in histone hyperacetylation and apoptosis. Global expression profiling indicated prominent upregulation of miR-494 in contrast to differential regulation of many protein-coding and non-coding genes validated by qRT-PCR. Although transfection with synthetic anti-miR-494 inhibitors failed to block drug-induced apoptosis or miR-494 upregulation, it induced the transcriptional repression of the PVRIG gene. Surprisingly, miR-494 inhibition in conjunction with low doses of Trichostatin A enhanced the weak T cell receptor- mediated apoptosis, indicating a subtle pro-survival role of miR-494. Interestingly, this prosurvival effect was overwhelmed by mitogen-mediated T cell activation and higher drug doses, which mediated caspase-dependent apoptosis.

Conclusion: Our results unravel a pro-survival function of miR-494 and its putative interaction with the PVRIG gene and the apoptotic machinery in Jurkat cells.

背景:虽然蛋白质编码基因受到组蛋白超乙酰化介导的调控,但尚不清楚microrna是否在T细胞白血病Jurkat中受到类似的调控。目的:探讨组蛋白修饰剂曲古霉素A治疗是否能同时改变microrna和蛋白编码基因的表达谱。方法:采用western blotting和流式细胞术分别分析药物治疗后组蛋白超乙酰化和活力的变化。对microrna和编码基因进行了配对的全球表达谱分析,并通过qRT-PCR验证了高度调控的基因。在脂质介导转染特异性抗microrna抑制剂后,使用qRT-PCR、流式细胞术和western blotting评估药物诱导的miR-494上调、推测靶基因表达和T细胞受体介导的凋亡之间的相互关系。结果:曲古抑素A处理Jurkat细胞导致组蛋白超乙酰化和细胞凋亡。全球表达谱显示miR-494显著上调,而qRT-PCR证实了许多蛋白质编码和非编码基因的差异调控。虽然转染合成的抗miR-494抑制剂不能阻断药物诱导的细胞凋亡或miR-494上调,但可以诱导PVRIG基因的转录抑制。令人惊讶的是,miR-494抑制与低剂量曲古抑素A联合可增强弱T细胞受体介导的细胞凋亡,表明miR-494具有微妙的促生存作用。有趣的是,这种促进生存的作用被丝裂原介导的T细胞活化和更高的药物剂量所掩盖,后者介导了caspase依赖性的细胞凋亡。结论:我们的研究结果揭示了miR-494的促存活功能及其与PVRIG基因和Jurkat细胞凋亡机制的相互作用。
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引用次数: 2
MicroRNAs: Key Regulators in Lung Cancer. microrna:肺癌的关键调控因子。
Pub Date : 2021-01-01 DOI: 10.2174/2211536610666210527102522
Younes El Founini, Imane Chaoui, Hind Dehbi, Mohammed El Mzibri, Roger Abounader, Fadila Guessous

Noncoding RNAs have emerged as key regulators of the genome upon gene expression profiling and genome-wide sequencing. Among these noncoding RNAs, microRNAs are short noncoding RNAs that regulate a plethora of functions, biological processes and human diseases by targeting the messenger RNA stability through 3'UTR binding, leading to either mRNA cleavage or translation repression, depending on microRNA-mRNA complementarity degree. Additionally, strong evidence has suggested that dysregulation of miRNAs contributes to the etiology and progression of human cancers, such as lung cancer, the most common and deadliest cancer worldwide. Indeed, by acting as oncogenes or tumor suppressors, microRNAs control all aspects of lung cancer malignancy, including cell proliferation, survival, migration, invasion, angiogenesis, cancer stem cells, immune-surveillance escape, and therapy resistance; and their expressions are often associated with clinical parameters. Moreover, several deregulated microRNAs in lung cancer are carried by exosomes and microvesicles and secreted in body fluids, mainly the circulation, where they conserve their stable forms. Subsequently, seminal efforts have been focused on extracellular microRNAs levels as noninvasive diagnostic and prognostic biomarkers in lung cancer. In this review, focusing on recent literature, we summarize the deregulation, mechanisms of action, functions and highlight clinical applications of miRNAs for better management and design of future lung cancer targeted therapies.

在基因表达谱和全基因组测序中,非编码rna已成为基因组的关键调控因子。在这些非编码RNA中,microrna是短的非编码RNA,通过3'UTR结合靶向信使RNA的稳定性,调节多种功能、生物过程和人类疾病,根据microRNA-mRNA的互补程度导致mRNA的切割或翻译抑制。此外,强有力的证据表明,mirna的失调有助于人类癌症的病因和进展,如肺癌,世界上最常见和最致命的癌症。事实上,通过作为癌基因或肿瘤抑制因子,microRNAs控制着肺癌恶性肿瘤的各个方面,包括细胞增殖、存活、迁移、侵袭、血管生成、癌症干细胞、免疫监视逃逸和治疗抵抗;它们的表达通常与临床参数有关。此外,肺癌中一些不受调控的小rna由外泌体和微囊携带,并在体液中分泌,主要是在循环中,它们保持其稳定的形式。随后,将细胞外microrna水平作为肺癌的无创诊断和预后生物标志物进行了开创性的研究。本文综述了近年来的文献,总结了mirna的调控、作用机制、功能,并重点介绍了mirna的临床应用,以更好地管理和设计未来的肺癌靶向治疗。
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引用次数: 6
期刊
MicroRNA (Shariqah, United Arab Emirates)
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